Metagenome / Metatranscriptome Family F092465

Basic Information
Family ID	F092465
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	69 residues
Representative Sequence	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPT
Number of Associated Samples	102
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.07 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	96.26 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (51.402 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.084 % of family members)
Environment Ontology (ENVO)	Unclassified (28.972 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.664 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.36% β-sheet: 16.67% Coil/Unstructured: 46.97%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00873	ACR_tran	59.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.40 %
Unclassified	root	N/A	48.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.40 %
Unclassified	root	N/A	48.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.40 %
Unclassified	root	N/A	48.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22.43 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.82 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	6.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.54 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3.74 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.87 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.54 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.87 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.93 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.54 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.93 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.93 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	6.54 %
Amycolatopsis balhimycina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	0.93 %
Streptomyces vietnamensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces vietnamensis	0.93 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908008\|FWIREl_GJ4R3DH01CL2TY	Not Available	525	Open in IMG/M
3300005167\|Ga0066672_10429704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	863	Open in IMG/M
3300005174\|Ga0066680_10164242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	1394	Open in IMG/M
3300005175\|Ga0066673_10565474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300005177\|Ga0066690_10889065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300005328\|Ga0070676_10239107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1207	Open in IMG/M
3300005336\|Ga0070680_100243619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1520	Open in IMG/M
3300005367\|Ga0070667_100381039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1281	Open in IMG/M
3300005434\|Ga0070709_10936479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	686	Open in IMG/M
3300005437\|Ga0070710_10540374	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300005437\|Ga0070710_11095520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300005437\|Ga0070710_11234970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	553	Open in IMG/M
3300005468\|Ga0070707_101192389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300005471\|Ga0070698_100590747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1050	Open in IMG/M
3300005471\|Ga0070698_101134001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300005518\|Ga0070699_100703154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	923	Open in IMG/M
3300005539\|Ga0068853_100500780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1147	Open in IMG/M
3300005556\|Ga0066707_10106441	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300005764\|Ga0066903_105473685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	670	Open in IMG/M
3300005841\|Ga0068863_101101794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799	Open in IMG/M
3300006028\|Ga0070717_10078029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces vietnamensis	2774	Open in IMG/M
3300006175\|Ga0070712_101385052	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300006237\|Ga0097621_100486883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1116	Open in IMG/M
3300006800\|Ga0066660_11337201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	561	Open in IMG/M
3300006806\|Ga0079220_10136789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1331	Open in IMG/M
3300006881\|Ga0068865_101009146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	729	Open in IMG/M
3300009011\|Ga0105251_10487738	Not Available	574	Open in IMG/M
3300009176\|Ga0105242_11806192	Not Available	650	Open in IMG/M
3300010322\|Ga0134084_10171971	Not Available	742	Open in IMG/M
3300010333\|Ga0134080_10683067	Not Available	508	Open in IMG/M
3300010336\|Ga0134071_10365965	Not Available	731	Open in IMG/M
3300010371\|Ga0134125_10243722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1998	Open in IMG/M
3300010373\|Ga0134128_11603822	Not Available	716	Open in IMG/M
3300010396\|Ga0134126_12585252	Not Available	551	Open in IMG/M
3300010400\|Ga0134122_10900712	All Organisms → cellular organisms → Bacteria → Terrabacteria group	856	Open in IMG/M
3300012200\|Ga0137382_10536597	Not Available	833	Open in IMG/M
3300012206\|Ga0137380_11290715	Not Available	615	Open in IMG/M
3300012362\|Ga0137361_10886983	All Organisms → cellular organisms → Bacteria → Terrabacteria group	809	Open in IMG/M
3300012683\|Ga0137398_10923299	Not Available	608	Open in IMG/M
3300012907\|Ga0157283_10188964	Not Available	640	Open in IMG/M
3300012914\|Ga0157297_10496365	Not Available	512	Open in IMG/M
3300012915\|Ga0157302_10064805	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1069	Open in IMG/M
3300012944\|Ga0137410_10561728	All Organisms → cellular organisms → Bacteria → Terrabacteria group	939	Open in IMG/M
3300012951\|Ga0164300_10084632	Not Available	1354	Open in IMG/M
3300012955\|Ga0164298_10497913	Not Available	813	Open in IMG/M
3300012960\|Ga0164301_10182746	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1319	Open in IMG/M
3300012972\|Ga0134077_10298507	Not Available	676	Open in IMG/M
3300012985\|Ga0164308_12242439	Not Available	508	Open in IMG/M
3300013297\|Ga0157378_10420235	Not Available	1321	Open in IMG/M
3300015245\|Ga0137409_10743420	All Organisms → cellular organisms → Bacteria → Terrabacteria group	816	Open in IMG/M
3300015372\|Ga0132256_100135839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2447	Open in IMG/M
3300016371\|Ga0182034_10415062	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300016387\|Ga0182040_10503119	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300016404\|Ga0182037_11092329	Not Available	698	Open in IMG/M
3300016422\|Ga0182039_11098795	Not Available	716	Open in IMG/M
3300019361\|Ga0173482_10019769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1894	Open in IMG/M
3300019883\|Ga0193725_1076699	Not Available	818	Open in IMG/M
3300020082\|Ga0206353_11995910	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1055	Open in IMG/M
3300020583\|Ga0210401_11412017	Not Available	553	Open in IMG/M
3300020583\|Ga0210401_11610804	Not Available	507	Open in IMG/M
3300021088\|Ga0210404_10495828	Not Available	689	Open in IMG/M
3300021088\|Ga0210404_10737292	Not Available	562	Open in IMG/M
3300021171\|Ga0210405_10856991	Not Available	693	Open in IMG/M
3300021405\|Ga0210387_10228453	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1622	Open in IMG/M
3300021445\|Ga0182009_10206767	Not Available	958	Open in IMG/M
3300021477\|Ga0210398_10049709	Not Available	3447	Open in IMG/M
3300024254\|Ga0247661_1001460	Not Available	3759	Open in IMG/M
3300025321\|Ga0207656_10598712	Not Available	563	Open in IMG/M
3300025898\|Ga0207692_10555070	Not Available	734	Open in IMG/M
3300025910\|Ga0207684_10746364	All Organisms → cellular organisms → Bacteria → Terrabacteria group	830	Open in IMG/M
3300025913\|Ga0207695_11307030	Not Available	606	Open in IMG/M
3300025922\|Ga0207646_10575710	Not Available	1011	Open in IMG/M
3300025927\|Ga0207687_10492996	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1022	Open in IMG/M
3300025929\|Ga0207664_10189169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1771	Open in IMG/M
3300025936\|Ga0207670_11336484	Not Available	608	Open in IMG/M
3300025941\|Ga0207711_10894532	Not Available	825	Open in IMG/M
3300025945\|Ga0207679_10833651	All Organisms → cellular organisms → Bacteria → Terrabacteria group	842	Open in IMG/M
3300026035\|Ga0207703_12224787	Not Available	524	Open in IMG/M
3300026067\|Ga0207678_10657343	All Organisms → cellular organisms → Bacteria → Terrabacteria group	921	Open in IMG/M
3300026121\|Ga0207683_10343589	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1369	Open in IMG/M
3300026310\|Ga0209239_1127102	Not Available	1049	Open in IMG/M
3300026322\|Ga0209687_1065036	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1185	Open in IMG/M
3300026899\|Ga0209326_1001932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1711	Open in IMG/M
3300027080\|Ga0208237_1060133	Not Available	562	Open in IMG/M
3300027119\|Ga0209522_1001755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1720	Open in IMG/M
3300027765\|Ga0209073_10526026	Not Available	502	Open in IMG/M
3300027775\|Ga0209177_10328527	Not Available	592	Open in IMG/M
3300028380\|Ga0268265_10937528	Not Available	852	Open in IMG/M
3300028787\|Ga0307323_10114216	All Organisms → cellular organisms → Bacteria → Terrabacteria group	970	Open in IMG/M
3300028875\|Ga0307289_10089469	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1251	Open in IMG/M
3300031226\|Ga0307497_10092741	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1161	Open in IMG/M
3300031544\|Ga0318534_10188877	Not Available	1190	Open in IMG/M
3300031572\|Ga0318515_10518055	Not Available	636	Open in IMG/M
3300031724\|Ga0318500_10736863	Not Available	504	Open in IMG/M
3300031771\|Ga0318546_11061758	Not Available	570	Open in IMG/M
3300031890\|Ga0306925_11353945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300031910\|Ga0306923_11505312	Not Available	704	Open in IMG/M
3300031912\|Ga0306921_12130960	Not Available	593	Open in IMG/M
3300032043\|Ga0318556_10173101	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300032075\|Ga0310890_10475647	Not Available	945	Open in IMG/M
3300032076\|Ga0306924_11809136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300032205\|Ga0307472_100821432	Not Available	851	Open in IMG/M
3300032261\|Ga0306920_104413465	Not Available	504	Open in IMG/M
3300032892\|Ga0335081_11204346	All Organisms → cellular organisms → Bacteria → Terrabacteria group	863	Open in IMG/M
3300033289\|Ga0310914_10833779	Not Available	821	Open in IMG/M
3300033412\|Ga0310810_10291684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1760	Open in IMG/M
3300034818\|Ga0373950_0096175	Not Available	634	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.31%
Host-Associated	Host-Associated	18.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.31%
Plants	Host-Associated → Plants	18.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.54%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.75%
Loam	Environmental → Terrestrial → Soil → Loam	19.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908008	Soil microbial communities from sample at FACE Site Metagenome WIR_Elev2	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026899	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027119	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIREl_04893150	2124908008	Soil	MSPKYLSVAGLVIGAAAILAGCAAVAPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPTHEVIPYS
Ga0066672_104297041	3300005167	Soil	MSPKHLSVAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQ
Ga0066680_101642422	3300005174	Soil	MSPKHMSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVR
Ga0066673_105654741	3300005175	Soil	MSPKHLSVAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTA
Ga0066690_108890651	3300005177	Soil	MSPKHLSVAGLVIGAAAILAGCAAAAPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVR
Ga0070676_102391072	3300005328	Miscanthus Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPAREIIPYSAVV
Ga0070680_1002436192	3300005336	Corn Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTEHAIQRLGIVTQPVRQTRAA
Ga0070667_1003810391	3300005367	Switchgrass Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTEHAIQRLGIVTQPVRQTRAAAQPA
Ga0070709_109364792	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSPKHLSGPLMAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRL
Ga0070710_105403742	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSPKHLSVAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRL
Ga0070710_110955202	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPAVIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAG
Ga0070710_112349702	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVT
Ga0070707_1011923891	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSPKHLSVAGVVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRQT
Ga0070698_1005907472	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSPNHLSVAGLVIGAAAILAGCATAAPAQAPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRQTTT
Ga0070698_1011340012	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSRKHLSVAGLVIGAAAVLAGCATATPEPTPPALIQPVAGSQIPQLQLTERAVQRLGIVTQPVR
Ga0070699_1007031542	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSPKHLSVAGLVIGAAAILARCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVR
Ga0068853_1005007802	3300005539	Corn Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTEHAIQRLGIVTQPVRQTRAAAQPAHEVIPY
Ga0066707_101064412	3300005556	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAV
Ga0066903_1054736851	3300005764	Tropical Forest Soil	MSPKHLSVAGLVIGAAAILAGCATAAPAQAPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTGPAAQPAHEVIPYSAVVYDHDG
Ga0068863_1011017942	3300005841	Switchgrass Rhizosphere	VKTVKGAPMSPKHLSVAGLVIGAAAILAGCAAATPAETPPAQIKPVAGSQIPQLQLTQRAVQRLG
Ga0070717_100780292	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAIQRLGIVTQPVRQTRA
Ga0070712_1013850521	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQ
Ga0097621_1004868832	3300006237	Miscanthus Rhizosphere	MSPKHLSGPLMAGLVIGAAAILAGCAAATPAETPPAVIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPT
Ga0066660_113372011	3300006800	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPAVIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQP
Ga0079220_101367892	3300006806	Agricultural Soil	MSPKHLSGPLMAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTQRAVQRLGIVTQ
Ga0068865_1010091461	3300006881	Miscanthus Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTEHAIQRLGIVTQPVRQTRAAAQPAHEVIP
Ga0105251_104877381	3300009011	Switchgrass Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPAHEVIPYSAVVYDHDGS
Ga0105242_118061922	3300009176	Miscanthus Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSEIPQLQLTERAVQRLGIV
Ga0134084_101719712	3300010322	Grasslands Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPAQIKPVAGSQIPQLQLTERAVQRLGIVTQPVQQ
Ga0134080_106830672	3300010333	Grasslands Soil	MSPKHLSVAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVR
Ga0134071_103659651	3300010336	Grasslands Soil	MSPKHLSVAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIATQPVRQPATAGQPAREVIPYSAV
Ga0134125_102437221	3300010371	Terrestrial Soil	MSPKHLSVAGLVIGTAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVR
Ga0134128_116038221	3300010373	Terrestrial Soil	MSPKHLSVAGLVIGTAAILAGCAATTPAETPPALIKPVAGSQIPQLQLTERAVQRLGIV
Ga0134126_125852522	3300010396	Terrestrial Soil	MSPKHLSVAGLVIGAAAILAGCSSATPAETPPALIKPVAGSQIPQLQLTERAV
Ga0134122_109007121	3300010400	Terrestrial Soil	MSPKHLSVAGLVIGTAAILAGCAATTPAETPPAVIKPVAGSQIPQLQLTGRAVQRLGIVTQPVRPT
Ga0137382_105365972	3300012200	Vadose Zone Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVR
Ga0137380_112907151	3300012206	Vadose Zone Soil	MSPKHLSVAGLVIGAAAILAGCATAAPAEAPPAVIKPVAGSQIPQLQLTERAVQRLGIVTQPVR
Ga0137361_108869831	3300012362	Vadose Zone Soil	MSPKHLSVAGLVIGAAAILAGCATAAPAQAPPALIKPVAGSQIPQLQLTERAVQRL
Ga0137398_109232991	3300012683	Vadose Zone Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPAHEVIPYSAV
Ga0157283_101889642	3300012907	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAIQRLGIVTQPVRQTRAAAQPAHEVIPY
Ga0157297_104963652	3300012914	Soil	MSPKHLSVAGLVIGAAAILAGCAAATPDKTPPALIKPVADSQIPQLQLTERAVQRLGIVTQPVRPTTTTGQPAHEVIP
Ga0157302_100648051	3300012915	Soil	MSPKHLSVAGLVIGAAAILAGCAAATPDKTPPALIKPVAGSQIPQLQLTERAIQRLGIVTQPVRQTRAAAQPAHEVIPYAAV
Ga0137410_105617281	3300012944	Vadose Zone Soil	MSPKNLSVAGLVIGAAAILAGCATAAPAEAPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPAHEV
Ga0164300_100846321	3300012951	Soil	MSPKHLSVAGLVIGAAAILAGCATAIPAETPPAQIKPVAGSQVPQLQLTEHAIQRLGIVTQPVRQTRAAGQPAHEVIPYAA
Ga0164298_104979131	3300012955	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGTQIPQLQLTERAVQRLGIVTQP
Ga0164301_101827462	3300012960	Soil	MAGLVIGAAAILAGCAAATPAETPPAQIKPVAGSQIPQLQLTERAVQRLGIVTQ
Ga0134077_102985072	3300012972	Grasslands Soil	MSAKHLSVAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTATAGQPVHEVIPYSAVVY
Ga0164308_122424392	3300012985	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRQTATAGQPAH
Ga0157378_104202351	3300013297	Miscanthus Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAIQRLGI
Ga0137409_107434201	3300015245	Vadose Zone Soil	MSPKRLSVAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAV
Ga0132256_1001358392	3300015372	Arabidopsis Rhizosphere	MAGLVIGAAAIVAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTRAAG
Ga0182034_104150621	3300016371	Soil	MSPKHLSAAGLVIGAAAIMAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRQTTTAGQPAHEVIPYS
Ga0182040_105031192	3300016387	Soil	MSPKHLSVAGLVIGAAAILAGCATEAPAEAPPALIKPVAGSQIPELQLTEHAIQRLGI
Ga0182037_110923291	3300016404	Soil	MSPKHLSVAGLVIGAAAILAGCAATAPAEAPPAVIMPVPGSQIPQLELTERAIQR
Ga0182039_110987952	3300016422	Soil	MSPKRLSVAGLVIGAAAILAGCATATPAEAPPAQIKPVAGSHIPQLQLTERAVQRLGIVTQPVRQATTAGQRAR
Ga0173482_100197691	3300019361	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAIQRLGIVTQPV
Ga0193725_10766992	3300019883	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQR
Ga0206353_119959101	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MSPKHLSVAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPVREIIPY
Ga0210401_114120172	3300020583	Soil	MSPKHLFVAGLVIGAAAILAGCATATPAQTPPALIKPVAGSPIPQLQLTERAVQRLGIVTQPVR
Ga0210401_116108041	3300020583	Soil	MSPKHLSVAGLVIGAAAILAGCASATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRQTRAAG
Ga0210404_104958281	3300021088	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRQTRAAGQPAHEVIPY
Ga0210404_107372922	3300021088	Soil	MSPKHLFVAGLVIGAAAILAGCATATPAQTPPALIKPVAGSPIPQLQLTERAVQRLGIVTQPVRSTTTAGQ
Ga0210405_108569911	3300021171	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRQTRAAGQPSHE
Ga0210387_102284531	3300021405	Soil	MSPKHLSVAGLVIGAGAILAGCATATPAQTPPALIKPVAGSPIPQLQLTERAVQRLGILTQPVRPTTT
Ga0182009_102067672	3300021445	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTRAAGQPA
Ga0210398_100497092	3300021477	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAQTPPALIKPVVGSPIPQLQLTERAVQRLGIVTQPVRPAATAGQSA
Ga0247661_10014601	3300024254	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPT
Ga0207656_105987121	3300025321	Corn Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAIQRLGIVTQPVRQTRAAAQPAHEVIPYAAVVYDTDGST
Ga0207692_105550702	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRL
Ga0207684_107463641	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSPKHLSVAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQ
Ga0207695_113070302	3300025913	Corn Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTEHAIQR
Ga0207646_105757101	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSPKHLSVAGVVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLG
Ga0207687_104929961	3300025927	Miscanthus Rhizosphere	MSPKHLSVAGLVIGTAAILAGCAATTPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTKTAGQPAHEVIP
Ga0207664_101891691	3300025929	Agricultural Soil	MSPKHLSGPLMAGLVIGAAAILAGCAAATPAETPPALIKPVADSQIPQLQLTERAVQRLG
Ga0207670_113364841	3300025936	Switchgrass Rhizosphere	MSPKHLSGPLMAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQP
Ga0207711_108945322	3300025941	Switchgrass Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTEHAIQRLGIVTQPVRQTRAAGQPAHE
Ga0207679_108336511	3300025945	Corn Rhizosphere	MSPKHLSGPLMAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIL
Ga0207703_122247871	3300026035	Switchgrass Rhizosphere	MSPKHLSGPLMAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPV
Ga0207678_106573432	3300026067	Corn Rhizosphere	MSPKHLSGPLMAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPAHDVIP
Ga0207683_103435891	3300026121	Miscanthus Rhizosphere	MSPKHLSGPLMAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPAHEVIPYSAV
Ga0209239_11271022	3300026310	Grasslands Soil	MSPKHLSVAGLVIGTAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRQTRAAGQPAHEVIPYA
Ga0209687_10650362	3300026322	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPAVIKPVAGSQIPQLQLTERAVQRLG
Ga0209326_10019322	3300026899	Forest Soil	MSPKHLSGPLMAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTA
Ga0208237_10601332	3300027080	Forest Soil	MSPKHLSVAGLVIGAAAILAGCATATPAQTPPALIKPVVGSPIPQLQLTERAVQRLGIVT
Ga0209522_10017552	3300027119	Forest Soil	MSPKHLSGPLMAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPAR
Ga0209073_105260262	3300027765	Agricultural Soil	MSPKHLSVAGLVIGAAAILAGCASATPAETPPALIKPVAGSQIPQLELTQRAVQRLGIVTQPVQPSTAG
Ga0209177_103285271	3300027775	Agricultural Soil	MSPKHLSVAGLVIGAAAILAGCASATPAETPPAHIKPVAGSQIPQLQLTQRAVQRLGIVTQPVQPSAAGQQAREVIPYSAV
Ga0268265_109375281	3300028380	Switchgrass Rhizosphere	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTEYAIQRLGIVIQPVRQTRAAGQPAHEVIPYAAMVY
Ga0307323_101142162	3300028787	Soil	MSPKHLSVAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQP
Ga0307289_100894691	3300028875	Soil	MSPKHLSVAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPSHE
Ga0307497_100927411	3300031226	Soil	MSPKHLSVAGLVIGAAAILAGCAAAAPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPAHEVI
Ga0318534_101888771	3300031544	Soil	MSPKHLPVAGLVIGATAILTGCGAAAPALTPPAVVLHVPGSQVPRLQLTERAIQRLG
Ga0318515_105180552	3300031572	Soil	MSPKHLSVAGLVIGAAAILAGCATEAPAEAPPALIKPVAGSQIPELQLTEHAIQRLGIVTRPVRQTTTAGQPLD
Ga0318500_107368631	3300031724	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRQTATAVKPAHEAIP
Ga0318546_110617581	3300031771	Soil	MSPKHLPVAGLVIGAAAILTGCGAAAPALTPPAVVLHVPGSQVPRLQLTERAIQRLGIVTQPVREKTTAGHRAGPEVIP
Ga0306925_113539451	3300031890	Soil	MSPKHLPVAGLVIGAAAILTGCGAAAPALTPPAVVLHVPGSQVPRLQLTERAIQRLGIVTQPVREKTTAGHRAGPEVIPYSAVVYDT
Ga0306923_115053121	3300031910	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPAVIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPGREVIPYSAVVYDTDG
Ga0306921_121309602	3300031912	Soil	MSPKHLSVAGLVIGAAAILAGCATAAPAEAPPALIKPVAGSQIPQLQLTERAVQRLG
Ga0318556_101731011	3300032043	Soil	MSPKHLSVAGLVIGAAAILAGCATAAPAEAPPALIKPVAGSQIPQLQLTERAVQRLGLVTQPVRQTGTAGHAAREIIPY
Ga0310890_104756472	3300032075	Soil	MSPKHLSVAGLVIGAAAVLAGCATGAPAEAPPAVIKPVAGSQIPQLQLTEHAVQRL
Ga0306924_118091361	3300032076	Soil	MSPKHLSVAGLVIGAAAILAGCAATAPAEAPPAVIMPVPGSQIPQLKLTERAIQRLGIVTQPVRQTTMAGHRAGPEVIPYSAVVYDT
Ga0307472_1008214322	3300032205	Hardwood Forest Soil	MSPKHLSVAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRQTRAAGQPSHEVI
Ga0306920_1044134651	3300032261	Soil	MSPKHLSVAGLVIGAAAILAGCATATPAETPPAVIKPVAGSQIPQLQLTERAVQRLGIVTQP
Ga0335081_112043461	3300032892	Soil	MSPKHLSVAGLVIGAAAILAGCSAAAPEQAPPAQIVPVPGSPVPKLLLTDHAVHRLGIV
Ga0310914_108337791	3300033289	Soil	MSPKHLPVAGLLIGAAAILTGCGAAVPASTPPAVVLHVPGSQVPRLQLTERAIQRLGLVTQPVRKK
Ga0310810_102916842	3300033412	Soil	MSPKHLSVAGLVIGTAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPAHEAI
Ga0373950_0096175_2_226	3300034818	Rhizosphere Soil	MSPKHLSVAGLVIGAAAILAGCAAATPAETPPALIKPVAGSQIPQLQLTERAVQRLGIVTQPVRPTTTAGQPARE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092465

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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