Metagenome Family F092462

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092462
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	60 residues
Representative Sequence	VRAVFVVLAAVLLASACSDDKPAAVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW
Number of Associated Samples	87
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.09 %
% of genes near scaffold ends (potentially truncated)	24.30 %
% of genes from short scaffolds (< 2000 bps)	83.18 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.327 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (27.103 % of family members)
Environment Ontology (ENVO)	Unclassified (39.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.748 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 45.90% β-sheet: 0.00% Coil/Unstructured: 54.10%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF08530	PepX_C	31.78
PF00535	Glycos_transf_2	6.54
PF00483	NTP_transferase	5.61
PF08241	Methyltransf_11	2.80
PF13641	Glyco_tranf_2_3	2.80
PF02129	Peptidase_S15	1.87
PF02578	Cu-oxidase_4	1.87
PF01850	PIN	0.93
PF01370	Epimerase	0.93
PF13229	Beta_helix	0.93
PF02636	Methyltransf_28	0.93
PF00583	Acetyltransf_1	0.93
PF00083	Sugar_tr	0.93
PF00730	HhH-GPD	0.93
PF03808	Glyco_tran_WecG	0.93
PF01061	ABC2_membrane	0.93
PF01807	zf-CHC2	0.93
PF03972	MmgE_PrpD	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2936	Predicted acyl esterase	General function prediction only [R]	31.78
COG1496	Copper oxidase (laccase) domain	Inorganic ion transport and metabolism [P]	1.87
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.93
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.93
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	0.93
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.93
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.93
COG1565	SAM-dependent methyltransferase, MidA family	General function prediction only [R]	0.93
COG1922	UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family	Cell wall/membrane/envelope biogenesis [M]	0.93
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.93
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.44 %
Unclassified	root	N/A	4.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58.88 %
Unclassified	root	N/A	4.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	33.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.61 %
Unclassified	root	N/A	4.67 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	33.64 %
Unclassified	root	N/A	4.67 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.87 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.93 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	33.64 %
Unclassified	root	N/A	4.67 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.87 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.93 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	33.64 %
Unclassified	root	N/A	4.67 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.87 %
Cyanothecaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Cyanothecaceae	0.93 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	33.64 %
Unclassified	root	N/A	4.67 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.87 %
Cyanothece	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Cyanothecaceae → Cyanothece	0.93 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105835280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	971	Open in IMG/M
3300000559\|F14TC_101309772	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300001661\|JGI12053J15887_10531199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300002245\|JGIcombinedJ26739_100794466	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300005167\|Ga0066672_10274309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1090	Open in IMG/M
3300005171\|Ga0066677_10116855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1430	Open in IMG/M
3300005175\|Ga0066673_10009801	All Organisms → cellular organisms → Bacteria → Proteobacteria	4052	Open in IMG/M
3300005181\|Ga0066678_10174255	All Organisms → cellular organisms → Bacteria → Proteobacteria	1360	Open in IMG/M
3300005184\|Ga0066671_10231371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1128	Open in IMG/M
3300005186\|Ga0066676_10837422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300005187\|Ga0066675_10017403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3975	Open in IMG/M
3300005332\|Ga0066388_104915059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300005434\|Ga0070709_10171990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1514	Open in IMG/M
3300005435\|Ga0070714_100253375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1628	Open in IMG/M
3300005435\|Ga0070714_100386262	All Organisms → cellular organisms → Bacteria → Proteobacteria	1321	Open in IMG/M
3300005435\|Ga0070714_100647012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1017	Open in IMG/M
3300005435\|Ga0070714_100648786	All Organisms → cellular organisms → Bacteria → Proteobacteria	1016	Open in IMG/M
3300005436\|Ga0070713_101395252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300005436\|Ga0070713_102481871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300005439\|Ga0070711_101735649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300005445\|Ga0070708_100020184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5614	Open in IMG/M
3300005468\|Ga0070707_100011482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	8260	Open in IMG/M
3300005540\|Ga0066697_10709650	Not Available	550	Open in IMG/M
3300005556\|Ga0066707_10794038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300005561\|Ga0066699_10543392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300005569\|Ga0066705_10318861	All Organisms → cellular organisms → Bacteria → Proteobacteria	984	Open in IMG/M
3300005576\|Ga0066708_10158306	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300005587\|Ga0066654_10852016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300005764\|Ga0066903_100537290	All Organisms → cellular organisms → Bacteria → Proteobacteria	1998	Open in IMG/M
3300006028\|Ga0070717_10409311	All Organisms → cellular organisms → Bacteria → Proteobacteria	1219	Open in IMG/M
3300006028\|Ga0070717_10645738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	960	Open in IMG/M
3300006028\|Ga0070717_11376463	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300006031\|Ga0066651_10158489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1189	Open in IMG/M
3300006031\|Ga0066651_10572816	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300006032\|Ga0066696_10162454	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300006032\|Ga0066696_10441016	All Organisms → cellular organisms → Bacteria → Proteobacteria	852	Open in IMG/M
3300006032\|Ga0066696_10941696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300006034\|Ga0066656_10569877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300006046\|Ga0066652_101005154	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300006046\|Ga0066652_101976271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300006175\|Ga0070712_101468094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300006175\|Ga0070712_102020433	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300006797\|Ga0066659_10908883	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300006806\|Ga0079220_11934966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	524	Open in IMG/M
3300006893\|Ga0073928_10000833	All Organisms → cellular organisms → Bacteria → Proteobacteria	65041	Open in IMG/M
3300007788\|Ga0099795_10001808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4813	Open in IMG/M
3300009137\|Ga0066709_100343824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2047	Open in IMG/M
3300009143\|Ga0099792_10048647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2057	Open in IMG/M
3300009162\|Ga0075423_12189454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300010046\|Ga0126384_11865103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300010320\|Ga0134109_10042627	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300010320\|Ga0134109_10490041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300010322\|Ga0134084_10096485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	938	Open in IMG/M
3300010335\|Ga0134063_10158852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1051	Open in IMG/M
3300010376\|Ga0126381_100218460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2560	Open in IMG/M
3300012202\|Ga0137363_10136962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Cyanothecaceae → Cyanothece	1909	Open in IMG/M
3300012203\|Ga0137399_10120329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2062	Open in IMG/M
3300012205\|Ga0137362_11516632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300012211\|Ga0137377_10991315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771	Open in IMG/M
3300012212\|Ga0150985_101200340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1286	Open in IMG/M
3300012212\|Ga0150985_117216668	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300012923\|Ga0137359_10441734	All Organisms → cellular organisms → Bacteria → Proteobacteria	1151	Open in IMG/M
3300012958\|Ga0164299_11112619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300012961\|Ga0164302_11270686	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300013307\|Ga0157372_10987930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	975	Open in IMG/M
3300014150\|Ga0134081_10055199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1192	Open in IMG/M
3300014497\|Ga0182008_10697696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300015241\|Ga0137418_10319548	All Organisms → cellular organisms → Bacteria → Proteobacteria	1291	Open in IMG/M
3300015371\|Ga0132258_10397346	All Organisms → cellular organisms → Bacteria	3424	Open in IMG/M
3300018431\|Ga0066655_10331808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	995	Open in IMG/M
3300018431\|Ga0066655_10858772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300018433\|Ga0066667_10297878	Not Available	1252	Open in IMG/M
3300018433\|Ga0066667_10305791	Not Available	1239	Open in IMG/M
3300018468\|Ga0066662_10817696	All Organisms → cellular organisms → Bacteria → Proteobacteria	906	Open in IMG/M
3300018482\|Ga0066669_10016160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4011	Open in IMG/M
3300018482\|Ga0066669_11874758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300018482\|Ga0066669_11911297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300020006\|Ga0193735_1128082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300020199\|Ga0179592_10533061	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300021170\|Ga0210400_10000556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	41421	Open in IMG/M
3300021560\|Ga0126371_10485761	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300021560\|Ga0126371_11636448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	769	Open in IMG/M
3300022557\|Ga0212123_10000366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	152815	Open in IMG/M
3300025915\|Ga0207693_10092441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2371	Open in IMG/M
3300025922\|Ga0207646_10010024	All Organisms → cellular organisms → Bacteria → Proteobacteria	9303	Open in IMG/M
3300025928\|Ga0207700_10340315	All Organisms → cellular organisms → Bacteria → Proteobacteria	1304	Open in IMG/M
3300026023\|Ga0207677_12053692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300026305\|Ga0209688_1057392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	719	Open in IMG/M
3300026305\|Ga0209688_1118687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300026312\|Ga0209153_1230387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300026314\|Ga0209268_1127063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300026330\|Ga0209473_1277687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300026359\|Ga0257163_1015479	All Organisms → cellular organisms → Bacteria → Proteobacteria	1169	Open in IMG/M
3300026490\|Ga0257153_1016185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1514	Open in IMG/M
3300026496\|Ga0257157_1058449	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300026547\|Ga0209156_10338239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300026550\|Ga0209474_10051166	All Organisms → cellular organisms → Bacteria	2956	Open in IMG/M
3300026550\|Ga0209474_10420947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	687	Open in IMG/M
3300027480\|Ga0208993_1039962	Not Available	840	Open in IMG/M
3300027583\|Ga0209527_1075285	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300027633\|Ga0208988_1145437	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300027681\|Ga0208991_1118446	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300027903\|Ga0209488_10000792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26845	Open in IMG/M
3300028536\|Ga0137415_10317094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1363	Open in IMG/M
3300031720\|Ga0307469_11060472	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300031962\|Ga0307479_11262230	Not Available	701	Open in IMG/M
3300032174\|Ga0307470_11257498	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.46%
Host-Associated	Host-Associated	6.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.59%
Plants	Host-Associated → Plants	6.54%
Aquatic	Environmental → Aquatic	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.80%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.49%
Loam	Environmental → Terrestrial → Soil → Loam	27.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.80%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	35.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.54%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.80%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.80%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058352802	3300000364	Soil	VRAAFVVLVAMLLAVACSDDKSAPVSVTMSPDDLKRNCADPQWKEKNLGLWYSVCRQPLRW*
F14TC_1013097722	3300000559	Soil	AAFVVLVAMLLAVACSDDKSAPVGVTMSPDDLKRNCADPQWKEKNLGLWYSVCRQPLSW*
JGI12053J15887_105311991	3300001661	Forest Soil	VRAVFVVLAAVLLASGCSDDEPVKVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLR
JGIcombinedJ26739_1007944662	3300002245	Forest Soil	VVLAAVLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLSW*
Ga0066672_102743091	3300005167	Soil	RVRAALLMLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0066677_101168554	3300005171	Soil	MLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0066673_100098014	3300005175	Soil	LKGEQRVRAVFVLLTAVLLASGCSGDKPVTVGTTMSPDELKRNCDDPQWKERNLGLWYSVCRRPLSW*
Ga0066678_101742552	3300005181	Soil	VRAVFVVLAAMLLASACSDDEPAKVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0066671_102313712	3300005184	Soil	MLAVLATAGGCSDDKPATSGSTISPEELKRECADPRWKEKNLGLWYSVCRQPLRW*
Ga0066676_108374222	3300005186	Soil	MLAVLAMVGGCSDDKPATTGSTISPEQLKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0066675_100174035	3300005187	Soil	VRAVFVLLTAVLLASGCSGDKPVTVGTTMSPDELKRNCDDPQWKERNLGLWYSVCRRPLSW*
Ga0066388_1049150591	3300005332	Tropical Forest Soil	VKAALLMVAVLVMVVGCSDDKAAKTGSTMSPDELKQKCADPQWKEKNLGLWYSVCRQPLRW*
Ga0070709_101719903	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLAVLATVGGCSDDKPATTGSTISPEQLKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0070714_1002533751	3300005435	Agricultural Soil	MLAVLAMVGGCSDDKPATTGSTISAEQLKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0070714_1003862622	3300005435	Agricultural Soil	VGVFTAFLAVLLLAGGCGDDKPVASATEASAETLKKDCTDPQWKEKNLGLWYSVCRKPLQW*
Ga0070714_1006470122	3300005435	Agricultural Soil	MLAVLAMVGGCSDDKPATIGSTISPEQLKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0070714_1006487862	3300005435	Agricultural Soil	VRAAFIVLVAMLLAVACSDDKSAAVGVTMSPDDLKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0070713_1013952522	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VRRAVRVGVFTAFLAVLLLAGGCGDDKPVASATEASAETLKKDCTDPQWKEKNLGLWYSVCRKPLQW*
Ga0070713_1024818712	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VRAVLVILAALLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLSW*
Ga0070711_1017356491	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VKAVLVVLAALLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0070708_1000201842	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRAAFVVLVAMLLAVACSDDKSAAVGVTMSPDDLKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0070707_1000114823	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VRGAFVVLVAMLLAVACSDDKSAAVGVTMSPDDLKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0066697_107096502	3300005540	Soil	VRAVFVVLVAVLLASGCSDDEPVKTGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0066707_107940383	3300005556	Soil	LMLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0066699_105433922	3300005561	Soil	MQESGGRVRAALLMLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0066705_103188612	3300005569	Soil	VRAVFVLLAAVLLASGCSDDPPVTAGTTMSPDELKRNCDDPQWKEKNLGLWYSVCRQPLRW*
Ga0066708_101583061	3300005576	Soil	GDALKGEQRVRAVFVLLTAVLLASGCSGDKPVTVGTTMSPDELKRNCDDPQWKERNLGLWYSVCRRPLSW*
Ga0066654_108520162	3300005587	Soil	CSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0066903_1005372903	3300005764	Tropical Forest Soil	MVAVLVMVVGCSDDKAAKTGSTMSPDELKQKCADPQWKEKNLGLWYSVCRQPLRW*
Ga0070717_104093112	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLLAVACSDDKSAAVGVTMSPDDLKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0070717_106457381	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GFGARKAGRLRAGLLMLAVLAMVGGCSDDKPATTGSTISPEQLKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0070717_113764631	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VRAVLVVLAALLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLSW*
Ga0066651_101584892	3300006031	Soil	LKGEQRVRAVFVLLTAVLLASGCSGDKPVTVGTTMSPDELKRNCDDPQWKEKNLGLWYSVCRRPLSW*
Ga0066651_105728162	3300006031	Soil	LKREARVRAVFVVLAAVLLASGCSDDEPVKVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0066696_101624542	3300006032	Soil	RGDALKGEGRVRAVFVLLTAVLLASGCSGDKPVTVGTTMSPDELKRNCDDPQWKERNLGLWYSVCRRPLSW*
Ga0066696_104410162	3300006032	Soil	VIASEDELAPKEARVRAVLLVFAAVLLVTACSDDKPAAVGATMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0066696_109416961	3300006032	Soil	LLMLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0066656_105698772	3300006034	Soil	VRAALLMLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKQKNLGLWYSVCRQPLRW*
Ga0066652_1010051542	3300006046	Soil	LHQKEAHVRAVFVILAAVLLATACSDDKPAAVGATMSPEELKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0066652_1019762712	3300006046	Soil	VRAVFVVLAAVLLASACSDDKPAAVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0070712_1014680941	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LLMLAVVAMAGGCSDDKPATGGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0070712_1020204331	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VKAVLVVLAALLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLSW*
Ga0066659_109088832	3300006797	Soil	RREVLKREAWVRAVFVVLAAVLLASGCSDDEPVKVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0079220_119349662	3300006806	Agricultural Soil	VRVGIFAALSAVLLLVAGCGDDKPVVSATEASAETLKKDCADPQWKEKNLGLWYSVCRQPLQW*
Ga0073928_1000083343	3300006893	Iron-Sulfur Acid Spring	VSLIEGEGRVRAALLLLVSVIVAGCSGDKPASTGSTISPETLKKECADPQWKEQNLGLWYSVCRQPLRW*
Ga0099795_100018085	3300007788	Vadose Zone Soil	MVLAAVLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLSW*
Ga0066709_1003438241	3300009137	Grasslands Soil	MILLIREAQVRAVFVVLTDVLLASACSDDEPAKVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0099792_100486472	3300009143	Vadose Zone Soil	MLAVLATAGGCSDDKPVTSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0075423_121894543	3300009162	Populus Rhizosphere	RKAGRLRAGLLMLAVLAMVGGCSDDKPATIGSTISPEQLKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0126384_118651032	3300010046	Tropical Forest Soil	VKAALLMVAVLVMVVGCSDDKAAKTGSTLSPDELKQKCAAPQWKEKNLGLWYSVCRQPLRW*
Ga0134109_100426271	3300010320	Grasslands Soil	ELDQESGGRVRAALLMLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0134109_104900412	3300010320	Grasslands Soil	LLASGCSDDEPVKVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0134084_100964852	3300010322	Grasslands Soil	LHREDELASKEARVRAVFVVLAAVLLASACSDDEPAKVGMTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0134063_101588522	3300010335	Grasslands Soil	MAGGCSDDKPATSGSTISPEELKRECADPRWKEKNLGLWYSVCRQPLRW*
Ga0126381_1002184605	3300010376	Tropical Forest Soil	VKAALLMVAVLVMVVGCSDDKAAKTGSTMSPDELKQKCADPKWKEKNLGLWYSVCRQPLRW*
Ga0137363_101369623	3300012202	Vadose Zone Soil	LDQESGGRVRAALLMLAVLATAGGCSDDKPAASGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0137399_101203292	3300012203	Vadose Zone Soil	MVLAAVLLANGCSDDKPAAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLSW*
Ga0137362_115166322	3300012205	Vadose Zone Soil	LDQESGGRVRAALLMLAVLATAGGCSDDKPVTSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0137377_109913151	3300012211	Vadose Zone Soil	MLAVLATAGGCSDDKPANSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0150985_1012003401	3300012212	Avena Fatua Rhizosphere	AVLLASACSGDEPAKVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0150985_1172166682	3300012212	Avena Fatua Rhizosphere	VVFTAVLLASACSDDEPAKVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0137359_104417342	3300012923	Vadose Zone Soil	MVLAAVLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRQPLSW*
Ga0164299_111126191	3300012958	Soil	MLAVLATAGGCSDDKPATTGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0164302_112706862	3300012961	Soil	GRVRAALLMLAVLATAGGCSDDKPATTGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0157372_109879302	3300013307	Corn Rhizosphere	MLAVLAMVCGCSDDMPATIGSTISPEQLKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0134081_100551994	3300014150	Grasslands Soil	AGGYSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW*
Ga0182008_106976962	3300014497	Rhizosphere	MLAVLATVGGCSDDKPATTGSTISPEQLKRECAHPQWKEKNLGLWYSVCRQPLRW*
Ga0137418_103195481	3300015241	Vadose Zone Soil	LAAVLLASGCSDDEPVKVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW*
Ga0132258_103973463	3300015371	Arabidopsis Rhizosphere	LAAALLASACSDDKPAAVSVTMSPEELKRNCADPQWKEKNLGLWYSVCREPLRW*
Ga0066655_103318083	3300018431	Grasslands Soil	MLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW
Ga0066655_108587722	3300018431	Grasslands Soil	VRAVFVVLAAVLLASACSDDEPAKVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLR
Ga0066667_102978781	3300018433	Grasslands Soil	MIVLIREARVRAVFVVLTAVLLASACSDDEPAKVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW
Ga0066667_103057912	3300018433	Grasslands Soil	VRAVLLVFAAVLLVTACSDDKPAAVGATMSPDELKRNCADPQWTEKNLGLWYSVCRQALR
Ga0066662_108176962	3300018468	Grasslands Soil	VRVGVFAALLAVLLLAGGCGDDKPVASASEASAETLKKDCADPQWKEKNLGLWYSVCRKPLQW
Ga0066669_100161603	3300018482	Grasslands Soil	VRAVFVLLTAVLLASGCSGDKPVTVGTTMSPDELKRNCDDPQWKERNLGLWYSVCRRPLS
Ga0066669_118747581	3300018482	Grasslands Soil	LLMLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKEQNLGLWYSA
Ga0066669_119112972	3300018482	Grasslands Soil	LLMLAVVAMAGGCSDDKPATSGSTISPEELKRECADPQWKQKNLGLWYSVCRQPLRW
Ga0193735_11280822	3300020006	Soil	LLMLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW
Ga0179592_105330612	3300020199	Vadose Zone Soil	AVLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLSW
Ga0210400_1000055635	3300021170	Soil	VRAVFVVLAAVLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLS
Ga0126371_104857612	3300021560	Tropical Forest Soil	MVAVLVMVVGCSDDKAAKTGSTMSPDELKQKCADPQWKEKNLGLWYSVCRQPLRW
Ga0126371_116364482	3300021560	Tropical Forest Soil	MATILVAASGCSDDQPTVVGVTMSPEELKRNCDDPQWKEKNLGLWYSVCRRPLNW
Ga0212123_10000366121	3300022557	Iron-Sulfur Acid Spring	LVSLIEGEGRVRAALLLLVSVIVAGCSGDKPASTGSTISPETLKKECADPQWKEQNLGLWYSVCRQPLRW
Ga0207693_100924414	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLAVLATAGGCSDDKPATGGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW
Ga0207646_1001002410	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VRGAFVVLVAMLLAVACSDDKSAAVGVTMSPDDLKRNCADPQWKEKNLGLWYSVCRQPLR
Ga0207700_103403152	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VRAVLVILAALLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLS
Ga0207677_120536921	3300026023	Miscanthus Rhizosphere	MLAVLAMMGGCSDDKLATTGSTISPEQLKRECADPQWKEKNLGLWYSVCRQPLRW
Ga0209688_10573921	3300026305	Soil	VRAALLMLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLR
Ga0209688_11186872	3300026305	Soil	LKGEQRVRAVFVLLTAVLLASGCSGDKPVTVGTTMSPDELKRNCDDPQWKERNLGLWYSVCRRPLSW
Ga0209153_12303872	3300026312	Soil	SPDCRLAVGRIGFRTAGGRVRAALLMLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW
Ga0209268_11270632	3300026314	Soil	LDQESGGRVRAALLMLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW
Ga0209473_12776872	3300026330	Soil	SRGKAGGVKAALLMVAVLVMASGCSDDTPGKSGSTMSPDELKQKCADPQWKEKNLGLWYSVCRQPLRW
Ga0257163_10154792	3300026359	Soil	MVLAAVLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLSW
Ga0257153_10161852	3300026490	Soil	VVLATVLLASGCSDDKPAAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLSW
Ga0257157_10584491	3300026496	Soil	LAAVLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLSW
Ga0209156_103382391	3300026547	Soil	RSVEVDSGQRGGRVRAALLMLAVLATAGGCSDDKPATSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW
Ga0209474_100511663	3300026550	Soil	LKAVFVLLTAVLLASGCSGDKPVTVGTTMSPDELKRNCDDPQWKERNLGLWYSVCRRPLS
Ga0209474_104209473	3300026550	Soil	LKREAGVRAVFVVLAAVLLASGCSDDEPVKVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW
Ga0208993_10399621	3300027480	Forest Soil	MVLAAMLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLSW
Ga0209527_10752852	3300027583	Forest Soil	VVLAAVLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLSW
Ga0208988_11454371	3300027633	Forest Soil	AAVLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRRPLSW
Ga0208991_11184462	3300027681	Forest Soil	ASGCSDDEPVKVGVTMSPDELKRNCADPQWKEKNLGLWYSVCRQPLRW
Ga0209488_1000079223	3300027903	Vadose Zone Soil	MLAVLATAGGCSDDKPVTSGSTISPEELKRECADPQWKEKNLGLWYSVCRQPLRW
Ga0137415_103170942	3300028536	Vadose Zone Soil	VRAAIFAMAAVLLAGGCSDDKPAPVSSTISPEVLKKDCADPKWKEQNLGLWYSVCRQPLR
Ga0307469_110604722	3300031720	Hardwood Forest Soil	MLLAVACSDDKSAPVSVTMSPDDLKRNCADPQWKEKNLGLWYSVCRQPLRW
Ga0307479_112622301	3300031962	Hardwood Forest Soil	VRAVFVVLAAVLLASGCSDDKPVAVGATMSPDDLKRNCADPQWKEKNLGLWYSVCRR
Ga0307470_112574982	3300032174	Hardwood Forest Soil	LVALLLAVACSDDKSAPVGVTMSPDDLKRNCADPQWKEKNLGLWYSVCRQPLRW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092462

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences