Metagenome Family F092398

Basic Information
Family ID	F092398
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	45 residues
Representative Sequence	EWKQYTFPFSTFETDGSDLSGVGFVHAQEPGKFQFEIDQVEIK
Number of Associated Samples	93
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	96.26 %
% of genes from short scaffolds (< 2000 bps)	77.57 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Bacteria (52.336 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (24.299 % of family members)
Environment Ontology (ENVO)	Unclassified (24.299 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.187 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.23% β-sheet: 11.27% Coil/Unstructured: 84.51%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF06762	LMF1	6.54
PF01380	SIS	6.54
PF11752	DUF3309	6.54
PF13377	Peripla_BP_3	4.67
PF13450	NAD_binding_8	3.74
PF08811	DUF1800	2.80
PF02684	LpxB	2.80
PF07885	Ion_trans_2	0.93
PF13628	DUF4142	0.93
PF08447	PAS_3	0.93
PF00575	S1	0.93
PF00882	Zn_dep_PLPC	0.93
PF13188	PAS_8	0.93
PF00857	Isochorismatase	0.93
PF07883	Cupin_2	0.93
PF12704	MacB_PCD	0.93
PF02518	HATPase_c	0.93
PF14534	DUF4440	0.93
PF01833	TIG	0.93
PF11941	DUF3459	0.93
PF17152	CHASE8	0.93
PF04261	Dyp_perox	0.93
PF08220	HTH_DeoR	0.93
PF16921	Tex_YqgF	0.93
PF01557	FAA_hydrolase	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0763	Lipid A disaccharide synthetase	Cell wall/membrane/envelope biogenesis [M]	2.80
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	2.80
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.93
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	31.78 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	30.84 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	30.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	6.54 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	2.80 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.87 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.93 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.93 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	0.93 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.93 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3.74 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.80 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2.80 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	1.87 %
Microcoleaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae	0.93 %
Acidicapsa ligni	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	0.93 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.93 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3.74 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.80 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2.80 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1.87 %
Kamptonema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Kamptonema	0.93 %
Acidicapsa ligni	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	0.93 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.93 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3.74 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.80 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2.80 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1.87 %
Kamptonema sp. PCC 6506	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Kamptonema → Kamptonema sp. PCC 6506	0.93 %
Acidicapsa ligni	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	0.93 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.93 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005364\|Ga0070673_102298284	Not Available	512	Open in IMG/M
3300005435\|Ga0070714_101353643	Not Available	695	Open in IMG/M
3300005436\|Ga0070713_100103795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	2467	Open in IMG/M
3300005439\|Ga0070711_101649124	Not Available	561	Open in IMG/M
3300005533\|Ga0070734_10250325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1016	Open in IMG/M
3300005535\|Ga0070684_100052640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3541	Open in IMG/M
3300005539\|Ga0068853_100569845	Not Available	1074	Open in IMG/M
3300005541\|Ga0070733_10106008	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300005543\|Ga0070672_101272782	Not Available	656	Open in IMG/M
3300005898\|Ga0075276_10107707	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300006176\|Ga0070765_101109669	Not Available	747	Open in IMG/M
3300006237\|Ga0097621_100155366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1963	Open in IMG/M
3300009177\|Ga0105248_10239370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	2043	Open in IMG/M
3300009551\|Ga0105238_10089102	All Organisms → cellular organisms → Bacteria	3072	Open in IMG/M
3300010361\|Ga0126378_11538681	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300010375\|Ga0105239_10247680	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M
3300010375\|Ga0105239_13374024	Not Available	520	Open in IMG/M
3300010396\|Ga0134126_11247564	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300010397\|Ga0134124_10244000	Not Available	1649	Open in IMG/M
3300012924\|Ga0137413_11653926	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012944\|Ga0137410_11957406	Not Available	520	Open in IMG/M
3300013296\|Ga0157374_10712496	Not Available	1017	Open in IMG/M
3300013297\|Ga0157378_11200858	Not Available	798	Open in IMG/M
3300013307\|Ga0157372_10060376	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4243	Open in IMG/M
3300013307\|Ga0157372_10388548	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300014151\|Ga0181539_1315706	Not Available	570	Open in IMG/M
3300014152\|Ga0181533_1373424	Not Available	505	Open in IMG/M
3300014201\|Ga0181537_10637396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	726	Open in IMG/M
3300014493\|Ga0182016_10036625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4034	Open in IMG/M
3300014502\|Ga0182021_13074792	Not Available	558	Open in IMG/M
3300015371\|Ga0132258_11549979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1673	Open in IMG/M
3300015374\|Ga0132255_102701348	Not Available	759	Open in IMG/M
3300016387\|Ga0182040_11823165	Not Available	521	Open in IMG/M
3300016404\|Ga0182037_10822028	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	802	Open in IMG/M
3300016445\|Ga0182038_11368330	Not Available	634	Open in IMG/M
3300017933\|Ga0187801_10470294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300017988\|Ga0181520_10835575	Not Available	619	Open in IMG/M
3300018004\|Ga0187865_1326302	Not Available	503	Open in IMG/M
3300018033\|Ga0187867_10259241	All Organisms → cellular organisms → Bacteria → Acidobacteria	978	Open in IMG/M
3300018034\|Ga0187863_10607575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	615	Open in IMG/M
3300018043\|Ga0187887_10083202	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300018090\|Ga0187770_11781134	Not Available	504	Open in IMG/M
3300021181\|Ga0210388_10035866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4097	Open in IMG/M
3300021181\|Ga0210388_11747019	Not Available	514	Open in IMG/M
3300021407\|Ga0210383_10759866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	831	Open in IMG/M
3300021433\|Ga0210391_10302716	Not Available	1254	Open in IMG/M
3300021433\|Ga0210391_11110082	Not Available	614	Open in IMG/M
3300022863\|Ga0224532_1034823	Not Available	662	Open in IMG/M
3300025911\|Ga0207654_10755350	Not Available	701	Open in IMG/M
3300025914\|Ga0207671_10076663	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	2502	Open in IMG/M
3300025924\|Ga0207694_10055587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3072	Open in IMG/M
3300025928\|Ga0207700_10084613	All Organisms → cellular organisms → Bacteria	2487	Open in IMG/M
3300025940\|Ga0207691_10040021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4334	Open in IMG/M
3300025940\|Ga0207691_10364419	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300025945\|Ga0207679_11241325	Not Available	684	Open in IMG/M
3300026023\|Ga0207677_10058240	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2659	Open in IMG/M
3300026035\|Ga0207703_11672609	Not Available	612	Open in IMG/M
3300026041\|Ga0207639_12130698	Not Available	522	Open in IMG/M
3300026078\|Ga0207702_11526761	Not Available	661	Open in IMG/M
3300027853\|Ga0209274_10093322	Not Available	1477	Open in IMG/M
3300027869\|Ga0209579_10599509	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300027884\|Ga0209275_10175397	Not Available	1148	Open in IMG/M
3300028090\|Ga0255349_1058113	Not Available	764	Open in IMG/M
3300028560\|Ga0302144_10025229	Not Available	1913	Open in IMG/M
3300028560\|Ga0302144_10152438	Not Available	747	Open in IMG/M
3300028745\|Ga0302267_10047249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2468	Open in IMG/M
3300028762\|Ga0302202_10062523	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2317	Open in IMG/M
3300028783\|Ga0302279_10046849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2671	Open in IMG/M
3300028783\|Ga0302279_10313749	Not Available	684	Open in IMG/M
3300028785\|Ga0302201_10029374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2958	Open in IMG/M
3300028788\|Ga0302189_10019969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3869	Open in IMG/M
3300028859\|Ga0302265_1074318	Not Available	1127	Open in IMG/M
3300028859\|Ga0302265_1264862	Not Available	506	Open in IMG/M
3300028860\|Ga0302199_1027111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2100	Open in IMG/M
3300028860\|Ga0302199_1136639	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300028882\|Ga0302154_10537859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300028906\|Ga0308309_10854878	Not Available	790	Open in IMG/M
3300029882\|Ga0311368_10034249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4785	Open in IMG/M
3300029882\|Ga0311368_10281474	Not Available	1269	Open in IMG/M
3300029907\|Ga0311329_10264757	Not Available	1270	Open in IMG/M
3300029907\|Ga0311329_10372495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1008	Open in IMG/M
3300029911\|Ga0311361_10971442	Not Available	716	Open in IMG/M
3300029917\|Ga0311326_10162204	Not Available	1194	Open in IMG/M
3300029953\|Ga0311343_10030464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7224	Open in IMG/M
3300029953\|Ga0311343_11033191	Not Available	642	Open in IMG/M
3300030041\|Ga0302274_10110438	Not Available	1468	Open in IMG/M
3300030051\|Ga0302195_10069243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1869	Open in IMG/M
3300030399\|Ga0311353_10122573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2507	Open in IMG/M
3300030399\|Ga0311353_11513861	Not Available	543	Open in IMG/M
3300030518\|Ga0302275_10112413	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300030520\|Ga0311372_10328624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Kamptonema → Kamptonema sp. PCC 6506	2384	Open in IMG/M
3300030693\|Ga0302313_10172747	Not Available	876	Open in IMG/M
3300031231\|Ga0170824_104197172	Not Available	655	Open in IMG/M
3300031236\|Ga0302324_100690642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1443	Open in IMG/M
3300031239\|Ga0265328_10289418	Not Available	631	Open in IMG/M
3300031258\|Ga0302318_10113948	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	1225	Open in IMG/M
3300031259\|Ga0302187_10135079	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1355	Open in IMG/M
3300031261\|Ga0302140_10987568	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031525\|Ga0302326_10346403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2340	Open in IMG/M
3300031788\|Ga0302319_10532385	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300031819\|Ga0318568_10626434	Not Available	670	Open in IMG/M
3300031902\|Ga0302322_103865873	Not Available	511	Open in IMG/M
3300031912\|Ga0306921_12220624	Not Available	578	Open in IMG/M
3300032770\|Ga0335085_12289100	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300032892\|Ga0335081_10713607	All Organisms → cellular organisms → Bacteria → Acidobacteria	1214	Open in IMG/M
3300034065\|Ga0334827_125616	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	820	Open in IMG/M
3300034065\|Ga0334827_140553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	759	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.64%
Host-Associated	Host-Associated	23.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.22%
Plants	Host-Associated → Plants	23.36%
Aquatic	Environmental → Aquatic	8.41%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	36.45%
Soil	Environmental → Terrestrial → Soil	31.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.89%
Freshwater	Environmental → Aquatic → Freshwater	8.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.54%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	36.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	17.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.41%
Loam	Environmental → Terrestrial → Soil → Loam	8.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	36.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.28%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	24.30%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.74%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.93%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005898	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022863	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 1-5	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028859	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_1	Environmental	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092398

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070673_1022982841	3300005364	Switchgrass Rhizosphere	YTFPFSTFETDGSDLIGLGFLRTQEVGKFQFQIDELEIK*
Ga0070714_1013536431	3300005435	Agricultural Soil	PAWKQYTFPFSTFETDGSDISGIGFIRAQEPGKFQFAIDEVEIK*
Ga0070713_1001037951	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TSFTAGPAWKQYTFPFSTFETDGSDISGIGFIRAQEPGKFQFAIDEVEIK*
Ga0070711_1016491241	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PAMTTFVASPDWKQYTFPFTAFDTDGSDLSGLGFIRILEPGTFQFAIDQVEIK*
Ga0070734_102503253	3300005533	Surface Soil	TFVAGPDWKQYTFPFSTFDTDGSDLTGMGFIRIGQPGKFRFEIDQVEIK*
Ga0070684_1000526405	3300005535	Corn Rhizosphere	GPEWKHYAFPFSTFETDGSDLSGIGFIRVGNLGKFQFDIDQVEIK*
Ga0068853_1005698452	3300005539	Corn Rhizosphere	EAPTMTSFTARPEWKKYTFPFSTFETDGSDLIGLGFLRTQEVGKFQFQVDELEIK*
Ga0070733_101060084	3300005541	Surface Soil	MTNFIAGPDWKQFTFPLSGFDTDASDLSGIGLIRLAEPGKFQFEIDQVEIK*
Ga0070672_1012727821	3300005543	Miscanthus Rhizosphere	FSTFETDGSDMSGIGFLRAQEVGKFRFQIDELEIK*
Ga0075276_101077072	3300005898	Rice Paddy Soil	QNGEPPAMTSFTAEPEWKQYTFPFSTFETDGSDLSGIGFIRAQELGKFQFQIDELEIR*
Ga0070765_1011096693	3300006176	Soil	FPFSTFETDGSDLTGLVFGKVETPGKLNFEIDQVEIR*
Ga0097621_1001553661	3300006237	Miscanthus Rhizosphere	KKYTFPFSTFETDGSDLIGLGFLRTQEVGKFQFQVDELEIK*
Ga0105248_102393701	3300009177	Switchgrass Rhizosphere	MTTFVAGPEWKQYTFPLSTFETDGSDLSGLGFIRAQEPGQFQFEIDQLEIQ*
Ga0105238_100891023	3300009551	Corn Rhizosphere	PAMTSFTAEPEWKRYTFPFSTFETDGSDLSGIGFIRAQEPGKFQFEIDELEIK*
Ga0126378_115386812	3300010361	Tropical Forest Soil	AGPEWKQYTFPFSTFQTDGSDLSSLAFVATQQPGKFEFEIDQVEIK*
Ga0105239_102476803	3300010375	Corn Rhizosphere	FTFPFSTFETDGSDLTGIGFIRVMEQGKFQFQIDELEIK*
Ga0105239_133740242	3300010375	Corn Rhizosphere	AGPEWKQYTFPFSTFETDGSDLIGLGFLRTQEVGKFQFQVDELEIK*
Ga0134126_112475641	3300010396	Terrestrial Soil	KQFTFPFSTFETDGSDLSGIGFIRAQDPGKFQFQIDELEIK*
Ga0134124_102440001	3300010397	Terrestrial Soil	PFSTFETDGSDLIGLGFLRTQEVGKFQFQVDELEIK*
Ga0137413_116539262	3300012924	Vadose Zone Soil	MAATPIGFLGEPPAMTSFTAGAEWKQYTFPFSTFETDGSDISGLGFVRVQEPGKFQFQIDEVEIK*
Ga0137410_119574062	3300012944	Vadose Zone Soil	MTSFVAGPEWKQYTFPFSALETDGSDLSGIGFIKVSGPGKFQFALDQLEIK*
Ga0157374_107124961	3300013296	Miscanthus Rhizosphere	TFPFSTFETDGSDLSGIGFLRAQEAGKFQFEIDELEIK*
Ga0157378_112008582	3300013297	Miscanthus Rhizosphere	PFSTFETDGSDLTGLGFLRTQEVGKFQFQIDELEIK*
Ga0157372_100603764	3300013307	Corn Rhizosphere	PPAMTTFIAAPEWKQFTFPFSTFETDGSDLTGIGFIRVMEQGKFQFQIDELEIK*
Ga0157372_103885482	3300013307	Corn Rhizosphere	STFETDGRDLSGIGFLRAQEAGKFQFEIDELEIK*
Ga0181539_13157062	3300014151	Bog	TESRSGNSGQMPAMTQFVAGPEWKLYTFPFSTFETDGSDLAGLGFVKVMSMGKFQFEIDQLQIK*
Ga0181533_13734241	3300014152	Bog	SGNSGQMPAMTQFVAGPEWKLYTFPFSTFETDGSDLAGLGFVKVMSMGKFQFEIDQLQIK
Ga0181537_106373962	3300014201	Bog	KQYTFPFSTFETDGSDLSGVGFVHAQEPGKFQFEIDQVEIK*
Ga0182016_100366251	3300014493	Bog	TFPLSTFETDGSDLSGLGFVHVGEPGKFQFELDQFEIK*
Ga0182021_130747921	3300014502	Fen	PEWKQYAFTFSALDIDVSDMTGLGFVRVQEPGKFQFQIDRLEIK*
Ga0132258_115499791	3300015371	Arabidopsis Rhizosphere	ATFETDGGDLSSLAFVATQPPGKFAFEIDELEIK*
Ga0132255_1027013482	3300015374	Arabidopsis Rhizosphere	STFETDGSDLIGLGFLRTQEVGKFQFQIDELEIK*
Ga0182040_118231651	3300016387	Soil	TGPEWKQYTFPFSAFETDGSDLSGIGFIRLQEPGKIQLQIDQLEIK
Ga0182037_108220283	3300016404	Soil	QYTFPFSTFDTDGGDLTGIGFVRINNPGKFQFALDQVEIK
Ga0182038_113683302	3300016445	Soil	AGPGWKQYTFPFSTFDTDGSDLSGIGFIRVQEPGKFQFQIDEFEIK
Ga0187801_104702942	3300017933	Freshwater Sediment	PDWKQFTFPFSTFQTDGSDITGLLFSRAGQPGKFQFAIDEVEIK
Ga0181520_108355752	3300017988	Bog	DMPAMTQFNAGPEWKQYTFPLSTFDTDGSDLSGLGFVQVGQPGKFQFELDQLEIK
Ga0187865_13263022	3300018004	Peatland	LYTFPFSIFETDGSDLTGLGFVKVMEVGKFQFEIDQLQIK
Ga0187867_102592412	3300018033	Peatland	FSTFETDGSDLAGLGFVHAQEPGKFQFEIDELQIK
Ga0187863_106075751	3300018034	Peatland	TFPFSTFETDGSDLSGLGFVHVMEPGKFQFEIDEVEIK
Ga0187887_100832021	3300018043	Peatland	YTFPFSDFETDGSDLKGLGFLRAQEPGPFSFQIDQVEIK
Ga0187770_117811341	3300018090	Tropical Peatland	QFTFPFSTFQTDGSDLTGLMFAHSQEPGKFQFELDEVEIK
Ga0210388_100358661	3300021181	Soil	AMTSFVAGPDWKKYTFPFSTFETDGSDLSGLGFVRAQEAGKFQFELDQLEIK
Ga0210388_117470192	3300021181	Soil	FVAGPDWKQYTFPFSAFETDGGDLSGIGFIKVGQPGKFQFELDQVEIK
Ga0210383_107598663	3300021407	Soil	GEAPAMTSFVAGPEWKQYTFPFSVFETDGSDLSGIGFIKLEPGKFQFLLDQVEIK
Ga0210391_103027162	3300021433	Soil	EWKQYTFPFSDFETDGSDLKGLGFLHAQEPGTFSFQIDQVEIK
Ga0210391_111100821	3300021433	Soil	GPEWKQYTFPFSVFETDGSDLSGIGFIKLVPGKFQFQLDQVEIK
Ga0224532_10348231	3300022863	Soil	SRSGNSGQMPAMTPFTAGPEWKLYSFPLSTFETDGGDLSGLGFIKTMDPGKFQFEIDQLQIK
Ga0207654_107553502	3300025911	Corn Rhizosphere	APAMTSFTAAPEWKQYTFPFSTFETDGSDLSGIGFLRAQEAGKFQFEIDELEIK
Ga0207671_100766631	3300025914	Corn Rhizosphere	TTFIAAPEWKQFTFPFSTFETDGRDLTGIGFIRVMEQGKFQFQIDELEIK
Ga0207694_100555871	3300025924	Corn Rhizosphere	PAMTSFTAEPEWKRYTFPFSTFETDGSDLSGIGFIRAQEPGKFQFEIDELEIK
Ga0207700_100846131	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TSFTAGPAWKQYTFPFSTFETDGSDISGIGFIRAQEPGKFQFAIDEVEIK
Ga0207691_100400211	3300025940	Miscanthus Rhizosphere	KKYTFPFSTFETDGSDLIGLGFLRTQEVGKFQFQIDELEIK
Ga0207691_103644194	3300025940	Miscanthus Rhizosphere	KKYTFPFSTFETDGSDLIGLGFLRTQEVGKFQFQVDELEIK
Ga0207679_112413251	3300025945	Corn Rhizosphere	EWKQFTFPFSTFETDGSDLSGIGFLRAQDPGKFQFEVDEFEIK
Ga0207677_100582401	3300026023	Miscanthus Rhizosphere	FTFPFSTFETDGRDLTGIGFIRVMEQGKFQFQIDELEIK
Ga0207703_116726092	3300026035	Switchgrass Rhizosphere	FTFPFSTFETDGSDISGIGFLRAQEVGKFRFQIDELEIK
Ga0207639_121306982	3300026041	Corn Rhizosphere	QFTFPFSTFETDGSDISGIGFLRAQEVGKFRFQIDELEIK
Ga0207702_115267611	3300026078	Corn Rhizosphere	KYTFPFSTFETDGSDLIGLGFLRTQEVGKFQFQVDELEIK
Ga0209274_100933223	3300027853	Soil	WKQFIFPFSTFETDGSDLTGLVFGKVETPGKLNFEIDQVEIR
Ga0209579_105995092	3300027869	Surface Soil	FPFSAFDTDGSDIFMIGFGQVETPGKFTFDIDQVEIR
Ga0209275_101753972	3300027884	Soil	WKQYSFPFSAFDTDGSDLTGLGFIDAQRPGKFQFQIDQVEIK
Ga0255349_10581131	3300028090	Soil	FAFSDFETDGSDIKGLGFLHAQEPGTFAFQIDQVEIK
Ga0302144_100252291	3300028560	Bog	KQYTFPLSTFETDGSDLSGLGFVHVGEPGKFQFELDQFEIK
Ga0302144_101524382	3300028560	Bog	RGGSGGEMPAMTQFTAGPEWKQYTFPLSTFETDGSDLSGVGLIHVGEPGKFQFEIDQFEI
Ga0302267_100472491	3300028745	Bog	GPEWKQYTFPFSTFETDGSDLSGVGFVHVMEPGKFQFEIDQVEIK
Ga0302202_100625233	3300028762	Bog	TPFVAGPEWKQYTFPFDTFETDGSDLSGLGFVHVMEPGKFQFEIDQVEIK
Ga0302279_100468493	3300028783	Bog	FSDFETDGSDIKGLGFLHAQEPGTFAFQIDQVEIK
Ga0302279_103137491	3300028783	Bog	FPFSTFETDGSDLSGLGFVHVQEPGKFQFQIDEVEIK
Ga0302201_100293741	3300028785	Bog	GGEMPAMTQFTAGPEWKQYTFPLSTFETDGSDLSGVGLIHVGEPGKFQFEIDQFEIK
Ga0302189_100199691	3300028788	Bog	TFAFSDFETDGSDIKGLGFLHAQEPGTFAFQIDQVEIK
Ga0302265_10743182	3300028859	Bog	FPFDTFETDGSDLSGLGFVHVMEPGKFQFEIDQVEIK
Ga0302265_12648621	3300028859	Bog	SRSGNSGEMPAMTSFTAGPDWKQYIFPFSTFETDGSDLAGIGFLHAQEPGKFQFEIDQFKIE
Ga0302199_10271113	3300028860	Bog	WKLYTFPFSTFQTDGSDLSALAFVHAQQPGKFQFEIDELQIK
Ga0302199_11366392	3300028860	Bog	TFPFSTFETDGSDLAGIGFLHAQEPGKFQFEIDQFKIE
Ga0302154_105378591	3300028882	Bog	WKQYTFPFSKFETDGSDLSGLGFVHVGEAGKFQFEIDQVEIK
Ga0308309_108548783	3300028906	Soil	MAGFVAGPEWKQFIFPFSTFETDGSDLTGLVFGKVETPGKLNFEIDQVEIR
Ga0311368_100342495	3300029882	Palsa	EWKQYTFPFSTFETDGSDLSGVGFVHAQEPGKFQFEIDQVEIK
Ga0311368_102814741	3300029882	Palsa	TFIAGPEWKQLAFPFSTFETDGSDLSGVGFVLAQQPGTFQFQIDQLEIK
Ga0311329_102647573	3300029907	Bog	ESRSGSSGDMPAMTPFTAGGEWKQYTFPLSTFETDGSDLSGLGFVHVGEPGKFQFELDQLEIK
Ga0311329_103724951	3300029907	Bog	AGPEWKLYTFPFSTFQTDGSDLSALAFVHAQQPGKFQFEIDELQIK
Ga0311361_109714422	3300029911	Bog	GEMPAMTQFTAGPEWKQYTFPLSTFETDGSDLSGVGLIHVGEPGKFQFEIDQFEIK
Ga0311326_101622042	3300029917	Bog	QYTFPLSTFETDGSDLSGVGLIHVGEPGKFQFEIDQFEIK
Ga0311343_100304645	3300029953	Bog	RSGSSGDMPAMTPFTAGGEWKQYTFPLSTFETDGSDLSGLGFVHVGEPGKFQFELDQLEI
Ga0311343_110331912	3300029953	Bog	PLSTFETDGSDLSGLGFVHVGEPGKFQFELDQFEIK
Ga0302274_101104381	3300030041	Bog	SRGGSGGEMPAMTQFTAGPEWKQYTFPLSTFETDGSDLSGVGLIHVGEPGKFQFEIDQFEIK
Ga0302195_100692433	3300030051	Bog	TTTFVAGPDWKQYTFPFETFETDGSDLSGVGFVHVMEPGKFQFEIDQVEIK
Ga0311353_101225734	3300030399	Palsa	TTFIAGPEWKQLAFPFSTFETDGSDLSGVGFVLAQQPGTFQFQIDQLEIK
Ga0311353_115138612	3300030399	Palsa	YTFPFSTFETDGSDLSGLGFVRAQEPGKFQFELDDLEIK
Ga0302275_101124132	3300030518	Bog	YTFPFSTFETDGSDLTGIGFLHAQEPGNFQFEIDQFQIE
Ga0311372_103286241	3300030520	Palsa	PEWKHFSFPFSTFETDGSDLSGLGFVHVQEPGKFQFEIDQVEIK
Ga0302313_101727473	3300030693	Palsa	FPFSTFDTDGSDLSGLGFVHVQEPGKFQFQLDQLEIK
Ga0170824_1041971721	3300031231	Forest Soil	FAAGPEWKQYTFPFSTFETDPSDLSGIGFIRVQEPGKLQFQLDEVEIK
Ga0302324_1006906422	3300031236	Palsa	QYTFPFTDFETDGSDLKGLGFLHAQEPGTFSFQIDQLEIK
Ga0265328_102894182	3300031239	Rhizosphere	QYTFPFSTFETDGSDISGIGFIRIQEPGKFQFAIDEVEIK
Ga0302318_101139481	3300031258	Bog	TQFVAGPEWKQYTFPFSAFETDGSDLTGLGFVRIKEPGKFQFQIDQFQIQ
Ga0302187_101350793	3300031259	Bog	KLYTFPFSTFQTDGSDLSALAFVHAQQPGKFQFEIDELQIK
Ga0302140_109875682	3300031261	Bog	EWKHYSFPFSTFETDGSDLSGLGFVHVQVPGKFQFEIDQVEIK
Ga0302326_103464031	3300031525	Palsa	DWKQYTFAFSDFETDGSDLKGLGFLHAQEPGTFSFQIDQVEIK
Ga0302319_105323851	3300031788	Bog	KHYSFPFSTFETDGSDLSGLGFVHVQVPGKFQFEIDQVEIK
Ga0318568_106264342	3300031819	Soil	RFPFSAFETDGSDLSGLGFIRMQEQGKFQFELDEVEIK
Ga0302322_1038658731	3300031902	Fen	WKKISIPFKQFETDGSDISGLGFMHVKEAGKYQFEIDQVRFE
Ga0306921_122206241	3300031912	Soil	MTTFVAGPEWKQYAFPFSTFETDGSDVTGLGFVRINNPGKFQFAPDHVEIK
Ga0335085_122891001	3300032770	Soil	FSAFETNGSDLIGIGFIRVQEPGKFQFDLDEFEIK
Ga0335081_107136071	3300032892	Soil	AGPEWKQYSLPFTQFQTDGSDISGLSFVRAGQPGKFQFEIDEVEIK
Ga0334827_125616_1_123	3300034065	Soil	QYVFPFSAFDTDGSDLTGLGFIRILEPAKFQFQLDQLEIK
Ga0334827_140553_648_758	3300034065	Soil	PFSTFETDGSDLSGVGFVHVMEPGKFQFEIDQVEIK

Hidden Markov Model


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