Metagenome Family F092374

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F092374
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	53 residues
Representative Sequence	MYTAIFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKHRTAIK
Number of Associated Samples	69
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.96 %
% of genes near scaffold ends (potentially truncated)	18.69 %
% of genes from short scaffolds (< 2000 bps)	82.24 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (53.271 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (27.103 % of family members)
Environment Ontology (ENVO)	Unclassified (46.729 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.682 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.76% β-sheet: 0.00% Coil/Unstructured: 40.24%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02798	GST_N	13.08
PF06827	zf-FPG_IleRS	12.15
PF06831	H2TH	9.35
PF00072	Response_reg	7.48
PF02518	HATPase_c	4.67
PF01209	Ubie_methyltran	3.74
PF13426	PAS_9	2.80
PF03109	ABC1	2.80
PF12697	Abhydrolase_6	0.93
PF13561	adh_short_C2	0.93
PF12706	Lactamase_B_2	0.93
PF14534	DUF4440	0.93
PF00126	HTH_1	0.93
PF02661	Fic	0.93
PF11695	DUF3291	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	9.35
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	3.74
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	3.74
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	2.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.27 %
All Organisms	root	All Organisms	46.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.27 %
cellular organisms	root	All Organisms → cellular organisms	46.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.06 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.23 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.27 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.27 %
Salinarimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae	1.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.87 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.93 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.93 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.27 %
Salinarimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas	1.87 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.93 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.93 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.27 %
Salinarimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas → Salinarimonas soli	1.87 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.93 %
Pseudomonas aeruginosa group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group	0.93 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.27 %
Salinarimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas → Salinarimonas soli	1.87 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	0.93 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.93 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120922108	All Organisms → cellular organisms → Bacteria → Proteobacteria	2370	Open in IMG/M
3300004281\|Ga0066397_10137605	Not Available	547	Open in IMG/M
3300004479\|Ga0062595_100634278	Not Available	841	Open in IMG/M
3300004779\|Ga0062380_10193352	Not Available	819	Open in IMG/M
3300005186\|Ga0066676_10441011	All Organisms → cellular organisms → Bacteria → Proteobacteria	881	Open in IMG/M
3300005332\|Ga0066388_100004058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9752	Open in IMG/M
3300005332\|Ga0066388_100029868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5084	Open in IMG/M
3300005332\|Ga0066388_100111920	Not Available	3227	Open in IMG/M
3300005332\|Ga0066388_100137938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2997	Open in IMG/M
3300005332\|Ga0066388_100226776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	2500	Open in IMG/M
3300005332\|Ga0066388_100916452	Not Available	1452	Open in IMG/M
3300005332\|Ga0066388_102103580	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300005332\|Ga0066388_102222309	Not Available	991	Open in IMG/M
3300005332\|Ga0066388_103936778	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300005454\|Ga0066687_10283296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	934	Open in IMG/M
3300005713\|Ga0066905_100005286	All Organisms → cellular organisms → Bacteria	5450	Open in IMG/M
3300005713\|Ga0066905_100127429	Not Available	1790	Open in IMG/M
3300005713\|Ga0066905_100501159	Not Available	1009	Open in IMG/M
3300005713\|Ga0066905_100877731	Not Available	783	Open in IMG/M
3300005713\|Ga0066905_101499921	Not Available	614	Open in IMG/M
3300005764\|Ga0066903_101936963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300005764\|Ga0066903_103219031	Not Available	883	Open in IMG/M
3300005937\|Ga0081455_10030768	All Organisms → cellular organisms → Bacteria	4871	Open in IMG/M
3300006034\|Ga0066656_10387202	Not Available	904	Open in IMG/M
3300006042\|Ga0075368_10078498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1341	Open in IMG/M
3300006177\|Ga0075362_10735235	Not Available	516	Open in IMG/M
3300006358\|Ga0068871_100555363	All Organisms → cellular organisms → Bacteria → Proteobacteria	1040	Open in IMG/M
3300006854\|Ga0075425_102763284	Not Available	541	Open in IMG/M
3300006954\|Ga0079219_10766834	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300006954\|Ga0079219_11143610	Not Available	666	Open in IMG/M
3300006954\|Ga0079219_11182217	Not Available	659	Open in IMG/M
3300007788\|Ga0099795_10025292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1990	Open in IMG/M
3300009012\|Ga0066710_100186830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2934	Open in IMG/M
3300009012\|Ga0066710_101270968	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300009100\|Ga0075418_10715663	All Organisms → cellular organisms → Bacteria → Proteobacteria	1080	Open in IMG/M
3300009137\|Ga0066709_100727107	Not Available	1430	Open in IMG/M
3300009147\|Ga0114129_10917090	All Organisms → cellular organisms → Bacteria → Proteobacteria	1109	Open in IMG/M
3300009156\|Ga0111538_10046514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5571	Open in IMG/M
3300009792\|Ga0126374_11144303	Not Available	620	Open in IMG/M
3300010043\|Ga0126380_10161719	Not Available	1450	Open in IMG/M
3300010043\|Ga0126380_11153066	Not Available	665	Open in IMG/M
3300010046\|Ga0126384_10040168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3166	Open in IMG/M
3300010046\|Ga0126384_12116058	Not Available	540	Open in IMG/M
3300010047\|Ga0126382_10005813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5583	Open in IMG/M
3300010047\|Ga0126382_10054609	Not Available	2361	Open in IMG/M
3300010047\|Ga0126382_10583692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	916	Open in IMG/M
3300010047\|Ga0126382_10627131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	889	Open in IMG/M
3300010047\|Ga0126382_10964372	Not Available	744	Open in IMG/M
3300010047\|Ga0126382_11250142	Not Available	668	Open in IMG/M
3300010047\|Ga0126382_11400037	Not Available	638	Open in IMG/M
3300010304\|Ga0134088_10514964	Not Available	590	Open in IMG/M
3300010336\|Ga0134071_10291335	Not Available	818	Open in IMG/M
3300010358\|Ga0126370_11711819	Not Available	605	Open in IMG/M
3300010359\|Ga0126376_10550595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1080	Open in IMG/M
3300010359\|Ga0126376_10902364	Not Available	874	Open in IMG/M
3300010359\|Ga0126376_11762179	Not Available	656	Open in IMG/M
3300010359\|Ga0126376_11968184	Not Available	626	Open in IMG/M
3300010360\|Ga0126372_10035507	All Organisms → cellular organisms → Bacteria → Proteobacteria	3194	Open in IMG/M
3300010360\|Ga0126372_11263792	Not Available	765	Open in IMG/M
3300010360\|Ga0126372_12224526	Not Available	598	Open in IMG/M
3300010362\|Ga0126377_10001995	All Organisms → cellular organisms → Bacteria → Proteobacteria	13786	Open in IMG/M
3300010362\|Ga0126377_10017202	Not Available	5858	Open in IMG/M
3300010362\|Ga0126377_12370952	Not Available	607	Open in IMG/M
3300010362\|Ga0126377_12490202	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300010403\|Ga0134123_10986778	Not Available	857	Open in IMG/M
3300012207\|Ga0137381_10140302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2074	Open in IMG/M
3300012207\|Ga0137381_10501135	Not Available	1059	Open in IMG/M
3300012351\|Ga0137386_10091607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2141	Open in IMG/M
3300012357\|Ga0137384_10767736	Not Available	781	Open in IMG/M
3300012357\|Ga0137384_11349180	Not Available	561	Open in IMG/M
3300012685\|Ga0137397_11234555	Not Available	536	Open in IMG/M
3300012925\|Ga0137419_10617077	Not Available	873	Open in IMG/M
3300012927\|Ga0137416_10347340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas → Salinarimonas soli	1243	Open in IMG/M
3300012929\|Ga0137404_10647753	Not Available	953	Open in IMG/M
3300012930\|Ga0137407_11477959	Not Available	646	Open in IMG/M
3300012948\|Ga0126375_10488168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	915	Open in IMG/M
3300012948\|Ga0126375_10493463	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300012948\|Ga0126375_10951025	Not Available	695	Open in IMG/M
3300012971\|Ga0126369_10934149	All Organisms → cellular organisms → Bacteria → Proteobacteria	954	Open in IMG/M
3300012971\|Ga0126369_12877468	Not Available	564	Open in IMG/M
3300015241\|Ga0137418_10352360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1214	Open in IMG/M
3300015358\|Ga0134089_10342873	Not Available	628	Open in IMG/M
3300015372\|Ga0132256_100714559	All Organisms → cellular organisms → Bacteria → Proteobacteria	1118	Open in IMG/M
3300017944\|Ga0187786_10179912	Not Available	788	Open in IMG/M
3300018028\|Ga0184608_10041252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1783	Open in IMG/M
3300018028\|Ga0184608_10096899	Not Available	1227	Open in IMG/M
3300018053\|Ga0184626_10175682	Not Available	910	Open in IMG/M
3300018054\|Ga0184621_10053332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1356	Open in IMG/M
3300018071\|Ga0184618_10068807	Not Available	1330	Open in IMG/M
3300018072\|Ga0184635_10147119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	940	Open in IMG/M
3300018078\|Ga0184612_10088765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1617	Open in IMG/M
3300019789\|Ga0137408_1300434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300021073\|Ga0210378_10038017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1911	Open in IMG/M
3300021078\|Ga0210381_10149146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300025935\|Ga0207709_10917978	Not Available	712	Open in IMG/M
3300027775\|Ga0209177_10245881	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300027831\|Ga0209797_10253237	Not Available	739	Open in IMG/M
3300027866\|Ga0209813_10281306	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300028536\|Ga0137415_10034325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4982	Open in IMG/M
3300028719\|Ga0307301_10290437	Not Available	536	Open in IMG/M
3300028793\|Ga0307299_10377774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas → Salinarimonas soli	531	Open in IMG/M
3300028875\|Ga0307289_10489497	Not Available	505	Open in IMG/M
3300031184\|Ga0307499_10038798	All Organisms → cellular organisms → Bacteria → Proteobacteria	1119	Open in IMG/M
3300031720\|Ga0307469_10407482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1163	Open in IMG/M
3300031820\|Ga0307473_10403225	Not Available	897	Open in IMG/M
3300032180\|Ga0307471_104060766	Not Available	517	Open in IMG/M
3300032205\|Ga0307472_101889617	Not Available	595	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.72%
Host-Associated	Host-Associated	10.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.44%
Aquatic	Environmental → Aquatic	10.28%
Plants	Host-Associated → Plants	10.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.44%
Sediment	Environmental → Aquatic → Sediment	6.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.61%
Freshwater	Environmental → Aquatic → Freshwater	3.74%
Roots	Host-Associated → Plants → Roots	3.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.68%
Loam	Environmental → Terrestrial → Soil → Loam	16.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.67%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.74%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	27.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.08%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.80%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.87%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1209221082	3300002568	Soil	MYTAMFAIMSAALAYAGMKFYGLTSVMAGGFVVAALAIGMAADVMRAKHRTAIK*
Ga0066397_101376051	3300004281	Tropical Forest Soil	TIASALLAYAGMKLYGATAVMAGVFVIATMGIGMAADIMRTEIVK*
Ga0062595_1006342781	3300004479	Soil	MYTAMFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKYRTAIK*
Ga0062380_101933522	3300004779	Wetland Sediment	MYTAIFTIGSALVAYAGMKFYGATTIMAAGFVVAAMAIGMAADVMRAKQRTAIKER*
Ga0066676_104410112	3300005186	Soil	MYTAILTIASALVAYAGMKFYGATAVMAGVFVIAVMGIGMAADLMRAETTK*
Ga0066388_1000040584	3300005332	Tropical Forest Soil	MYTAILTIASAVVAYAGMKLYGATAVMAGVFVIAVMGIGMAADIMRAEAAK*
Ga0066388_1000298683	3300005332	Tropical Forest Soil	MYTAILTIASAPVAYAGMKLYGATVVMAGVFVIAMMGIGMAADIMRAEAGK*
Ga0066388_1001119203	3300005332	Tropical Forest Soil	MYTAIFTIAAALVAYAGMKLYGATAVMAGVFVISVMGLGMAADIMRAEAVK*
Ga0066388_1001379381	3300005332	Tropical Forest Soil	MYTAIFTIAAALVAYAGMKHYGATAVMAGVFVISVMGIGMAADIMRAEAAK*
Ga0066388_1002267761	3300005332	Tropical Forest Soil	MYTAILTIVSTLTAYAAMKLYGATAVTTGGFVIAAMVIGVAADLMRLGQRAAVK*
Ga0066388_1009164521	3300005332	Tropical Forest Soil	MYTAIFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAIK*
Ga0066388_1021035802	3300005332	Tropical Forest Soil	MYTAIFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKHRTAIK*
Ga0066388_1022223092	3300005332	Tropical Forest Soil	MYTAIFAIMSAALAYVGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAVK*
Ga0066388_1039367781	3300005332	Tropical Forest Soil	MYTAMFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKHRAAIK*
Ga0066687_102832961	3300005454	Soil	MYTAIFAIMSAALAYAGMKFYGLTAVMAGGIAVAALAIGMAADVMRAKHRTAIK*
Ga0066905_1000052863	3300005713	Tropical Forest Soil	MYTAIFTIASALLAYAGMKLYGATAVMAGVFVIATMGIGMAADIMRTEIVK*
Ga0066905_1001274292	3300005713	Tropical Forest Soil	MYTAIFTIAAALVAYAGMKHYGATAVMAGVFVISVMGLGMATDIMRAEAAK*
Ga0066905_1005011591	3300005713	Tropical Forest Soil	MYTAIFAIMSAALAYVGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAIK*
Ga0066905_1008777312	3300005713	Tropical Forest Soil	MFTMILTLASASLAYAGMSLYDVRAVMAGVFVIGAMGIGVAADIIRAEATK*
Ga0066905_1014999212	3300005713	Tropical Forest Soil	MYTAIFAIMSAALAYAGMKFYGLTAVMAGGFVVAAMAIGMAADVMRAKHRTAVK*
Ga0066903_1019369632	3300005764	Tropical Forest Soil	MFTVVLTFASVSLAYAGMSLYEVTAVMAGVFVIAVMGIGVAADIMRAEATK*
Ga0066903_1032190312	3300005764	Tropical Forest Soil	MHMYTAIFTIAAALVAYAGMKHYGATAVMAGVFVISVMGLGMAADIMRAEAVK*
Ga0081455_100307683	3300005937	Tabebuia Heterophylla Rhizosphere	MYTAIFTIASALVAYAGMKLYGATAVMAGVFVIATMGIGMAADIMRTEIVK*
Ga0066656_103872022	3300006034	Soil	MYTAILTIASALVAYAGMKFYGATAVMAGVFVIAVMGIGMAADLMRAEATK*
Ga0075368_100784981	3300006042	Populus Endosphere	MYTAMFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKHRTAIK*
Ga0075362_107352352	3300006177	Populus Endosphere	MYTVIFAIMSAALAYAGMKFYGLTAVMAGGFVIAALAIGMAADVMRAKYRTAMK*
Ga0068871_1005553631	3300006358	Miscanthus Rhizosphere	MYTAMFAIMSAALAYAGMKFYGLTAVMAGGFVVAALA
Ga0075425_1027632842	3300006854	Populus Rhizosphere	MYTAIFAIMSAALAYAGMKFYGLTSVMAGGFVVAALAIGMAADVMRAKYRTAIK*
Ga0079219_107668343	3300006954	Agricultural Soil	MYTAMFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMVADVMRAKHRAAIK*
Ga0079219_111436102	3300006954	Agricultural Soil	MYTAIFAIMSAALAYAGMKFYGLTSVMAGGFVVAALAIGMAADVMRAKYRTAI
Ga0079219_111822171	3300006954	Agricultural Soil	MYTALFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAVGMAADLMRAKYRTAIK*
Ga0099795_100252923	3300007788	Vadose Zone Soil	MYTAMFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAVK*
Ga0066710_1001868302	3300009012	Grasslands Soil	MYTAILTIACTLAAYASTKLYGATAVMAGSFVLTAMAIGVAADLMRAWQRAAVK
Ga0066710_1012709682	3300009012	Grasslands Soil	AALAYAGMKFYGLTAIMAGGFVVAALATGMAADVMRAKHRTAIK
Ga0075418_107156631	3300009100	Populus Rhizosphere	MYTAMFAIMSAALAYAGMKFYGLTAVMAGGFVVAAL
Ga0066709_1007271071	3300009137	Grasslands Soil	EFDMYTAILTIACTLAAYASTKLYGATAVMAGSFVLTAMAIGVAADLMRAWQRAAVK*
Ga0114129_109170901	3300009147	Populus Rhizosphere	MYTAMFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKHRTAMK*
Ga0111538_100465141	3300009156	Populus Rhizosphere	MYTVIFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKHRTAIK*
Ga0126374_111443031	3300009792	Tropical Forest Soil	MYTAIFTIAAALVAYAGMKHYGATAVMAGVFVISVMGLGMAADIMRAEA
Ga0126380_101617192	3300010043	Tropical Forest Soil	MFTVVLTFASASLAYAGMSLYDVTTVMAGVFVIAVMGIGAAADIIRAEATK*
Ga0126380_111530661	3300010043	Tropical Forest Soil	MSPGEFNMYTAILTIASALVAYAGMKFYGATAVMAGVFVIAVMGIGMAADIMRAEAAK*
Ga0126384_100401682	3300010046	Tropical Forest Soil	MFTVVLTFASALVAYAGMSLYEVTAVMAGVFVIAVMGIGMAADIIRAEATK*
Ga0126384_121160582	3300010046	Tropical Forest Soil	MSPGEFNMYTAILTIASAVVAYAGMKRYGATAVMAGVFVIAVMGIGMAADIMRAEAAK*
Ga0126382_100058135	3300010047	Tropical Forest Soil	MILTLASASLAYAGMSLYDVRAVMAGVFVIGAMGIGVAADIIRAEATK*
Ga0126382_100546093	3300010047	Tropical Forest Soil	MYTAIFTIAAALVAYAGMKHYGATAVMAGVFVISVMGLGMAADIMRAEAVK*
Ga0126382_105836921	3300010047	Tropical Forest Soil	MYTAILTIASALIAYAGMKLYGVTAVMAGVFVIAAMGIGMAADIMRTEIVK*
Ga0126382_106271312	3300010047	Tropical Forest Soil	MYTAIFAIMSAALAYAGMKFYGLTAVMAGGSVVAALAIGMAADVMRAKHRTAIK*
Ga0126382_109643722	3300010047	Tropical Forest Soil	MFTVVLTFASALVAYAGMSLYEVTAVMAGAFVIAVMGIGVAADIIRAEATK*
Ga0126382_112501421	3300010047	Tropical Forest Soil	MSPGEFNMYTAILTIASALVAYAGMRLYGATAVIAGVFVMSVMGLGVAADIMRAEVVK*
Ga0126382_114000371	3300010047	Tropical Forest Soil	SALVAYAGMKLYGATAVMAGVFVIAAMGIGMAADIMRTEIVK*
Ga0134088_105149642	3300010304	Grasslands Soil	MYTAILTIASALVAYAGMKFYGATAVMAGVFVIAVMGIGMAADLMRAEGTK*
Ga0134071_102913351	3300010336	Grasslands Soil	ILTIASALVAYAGMKFYGATAVMAGVFVIAVMGIGMAADLMRAEATK*
Ga0126370_117118192	3300010358	Tropical Forest Soil	VSTLTAYAAMKLYGATAVTTGGFVIAAMVIGVAADLMRLGQRAAVK*
Ga0126376_105505952	3300010359	Tropical Forest Soil	MYTAIFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAVGMAADVMRAKHRTAIK*
Ga0126376_109023641	3300010359	Tropical Forest Soil	MYTAIFAILSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAI
Ga0126376_117621791	3300010359	Tropical Forest Soil	MYTAIFTIASALVAYAGMKLYGVTAVMAGVFVISTMGIGMAADIMRTEIVK*
Ga0126376_119681842	3300010359	Tropical Forest Soil	MFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMVADVMRAKQRAAIK*
Ga0126372_100355074	3300010360	Tropical Forest Soil	MMPGESTMYTAILTIVSTLTAYAAMKLYGATAVTTGGFVIAAMVIGVAADLMRIGQRAAVK*
Ga0126372_112637921	3300010360	Tropical Forest Soil	VLTFASVSLAYAGMSLYEVTAVMAGVFVIAVMGIGVAADIMRAEATK*
Ga0126372_122245262	3300010360	Tropical Forest Soil	MYTAIFTIASALVAYAGMKLYGAPAVMAGVFIISVMGIGMAADIMRAEIVK*
Ga0126377_1000199511	3300010362	Tropical Forest Soil	MYTALFAIMSAALAYAGMKFYGLTAVMAGGFVVAAMAIGMAADVMRAKHRTAVK*
Ga0126377_100172023	3300010362	Tropical Forest Soil	MHMYTAIFTIAAALVAYAGMKHYGATAVMAGVFVISVMGLGMATDIMRAEAAK*
Ga0126377_123709521	3300010362	Tropical Forest Soil	MYTAIFAIMSAALAYAGMKFYGLTAMMAGGFVVAALAIGMAADLMRAKHRTAVK*
Ga0126377_124902021	3300010362	Tropical Forest Soil	MYTALFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKHRTAMK*
Ga0134123_109867782	3300010403	Terrestrial Soil	MFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKYRTAIK*
Ga0137381_101403021	3300012207	Vadose Zone Soil	MYTAMFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKYRTALK*
Ga0137381_105011351	3300012207	Vadose Zone Soil	MYTAIFAIMSAAFAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAIK*
Ga0137386_100916072	3300012351	Vadose Zone Soil	MYTAIFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVTRAKHRTALK*
Ga0137384_107677362	3300012357	Vadose Zone Soil	YTASFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKYRTALK*
Ga0137384_113491801	3300012357	Vadose Zone Soil	MYTAIFAIMSAAFAYAGMKFYGLTAIMASGFVVAALAIGMAADVMRAKHRTAIK*
Ga0137397_112345552	3300012685	Vadose Zone Soil	AIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAVK*
Ga0137419_106170771	3300012925	Vadose Zone Soil	MSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKYRTAIK*
Ga0137416_103473401	3300012927	Vadose Zone Soil	MYTAIFAIMSAALAYAGMKFYGLTAIMAGGLVVAALAIGMAADVMRAKHRTALK*
Ga0137404_106477533	3300012929	Vadose Zone Soil	MFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAVK*
Ga0137407_114779592	3300012930	Vadose Zone Soil	MYTAMFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTALK*
Ga0126375_104881682	3300012948	Tropical Forest Soil	MTPGERNMYTAIFTIASALVAYAGMKLYGVTAVMAGVFVISTMGIGMAADIMRTEIVK*
Ga0126375_104934632	3300012948	Tropical Forest Soil	MTPGEFNMYTVILTIASALVAYAGMRLYGATAVIAGVFVMSVMGLGVAADIMRAEVVK*
Ga0126375_109510251	3300012948	Tropical Forest Soil	MILGECNMYTAILTIVSALTAYAAMKLYGATAVTTGGFVIAAIVIGIMADLMRVSQRAQIK*
Ga0126369_109341491	3300012971	Tropical Forest Soil	MPGESTMYTAILTIVSTLTAYAAMKLYGATAVTTGGFVIAAMVIGVAADLMRVGQRAAVK
Ga0126369_128774682	3300012971	Tropical Forest Soil	SMYTAIFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAIK*
Ga0137418_103523601	3300015241	Vadose Zone Soil	MSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRARHRTAVK*
Ga0134089_103428732	3300015358	Grasslands Soil	ATRMIPGELNMYTAILTIASALVAYAGMKFYGATAVMAGVFVIAVMGIGMAADLMRAETTK*
Ga0132256_1007145591	3300015372	Arabidopsis Rhizosphere	MYTAMFAIMPAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKHRTAIK*
Ga0187786_101799121	3300017944	Tropical Peatland	MYTAIFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKHRTAIK
Ga0184608_100412522	3300018028	Groundwater Sediment	MYTAMFAIMSAALAYAGMQFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAVK
Ga0184608_100968991	3300018028	Groundwater Sediment	MKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAVK
Ga0184626_101756822	3300018053	Groundwater Sediment	MIPGELTMCTAILTIASALIAYASMKLYGVTAVMAGVFVISVMGIGMAADIMRTEAAR
Ga0184621_100533322	3300018054	Groundwater Sediment	MYTAMFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAVK
Ga0184618_100688071	3300018071	Groundwater Sediment	MYTAIFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAVK
Ga0184635_101471192	3300018072	Groundwater Sediment	MYTAIFAIGSALVAYAGMKFYGATAVMAGGFVVAAMAVGMAADMMRAKQRAAVK
Ga0184612_100887651	3300018078	Groundwater Sediment	MIPGELTMCTAILTIASALIAYAGMKLYGDTAVMAGVFVISMMGIGMAADIMRTEAAR
Ga0137408_13004341	3300019789	Vadose Zone Soil	MYSAIFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAIK
Ga0210378_100380173	3300021073	Groundwater Sediment	MYTAIFAIGSALVAYAGMKFYGATAIMAGGFVVAAMAVGMAADVMRAKQRAAVK
Ga0210381_101491461	3300021078	Groundwater Sediment	MYTAMFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHR
Ga0207709_109179781	3300025935	Miscanthus Rhizosphere	MYTAMFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKYRTAIK
Ga0209177_102458812	3300027775	Agricultural Soil	MYTAMFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMVADVMRAKHRAAIK
Ga0209797_102532372	3300027831	Wetland Sediment	MYTAIFTIGSALVAYAGMKFYGATTIMAAGFVVAAMAIGMAADVMRAKQRTAIKER
Ga0209813_102813061	3300027866	Populus Endosphere	MYTAMFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKHRTAIK
Ga0137415_100343253	3300028536	Vadose Zone Soil	MYTAIFAIMSAALAYAGMKFYGLTAIMAGGLVVAALAIGMAADVMRAKHRTALK
Ga0307301_102904371	3300028719	Soil	MYTAMFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKHRTAVK
Ga0307299_103777742	3300028793	Soil	MYTAMFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADV
Ga0307289_104894972	3300028875	Soil	MYTAIFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAIK
Ga0307499_100387983	3300031184	Soil	MYTAIFAIMSAALAYAGMKFYGLTSVMAGGFVVAALAIGMAADVMRAKHRTAIK
Ga0307469_104074822	3300031720	Hardwood Forest Soil	MYTAIFAIASALVAYAGMKLYGATAVMAGVFVIAAMGIGMAADIMRTEIVK
Ga0307473_104032252	3300031820	Hardwood Forest Soil	MYTAIFAITSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAIK
Ga0307471_1040607661	3300032180	Hardwood Forest Soil	MYTALFAIMSAALAYAGMKFYGLTAVMAGGFVVAALAIGMAADVMRAKHRTAIK
Ga0307472_1018896172	3300032205	Hardwood Forest Soil	MYTALFAIMSAALAYAGMKFYGLTAIMAGGFVVAALAIGMAADVMRAKHRTAIK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092374

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences