Metagenome / Metatranscriptome Family F092361

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092361
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	45 residues
Representative Sequence	QQVAKDNIDYLDILFKNNKNKNLSKLKSNFKKSTILERNFWECFV
Number of Associated Samples	66
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.28 %
% of genes near scaffold ends (potentially truncated)	88.79 %
% of genes from short scaffolds (< 2000 bps)	90.65 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.850 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (27.103 % of family members)
Environment Ontology (ENVO)	Unclassified (88.785 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (68.224 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.32% β-sheet: 0.00% Coil/Unstructured: 50.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF03070	TENA_THI-4	9.35
PF03446	NAD_binding_2	5.61
PF00805	Pentapeptide	3.74
PF01322	Cytochrom_C_2	3.74
PF00753	Lactamase_B	3.74
PF14833	NAD_binding_11	2.80
PF02525	Flavodoxin_2	2.80
PF01262	AlaDh_PNT_C	1.87
PF14342	DUF4396	1.87
PF05222	AlaDh_PNT_N	1.87
PF01370	Epimerase	0.93
PF03747	ADP_ribosyl_GH	0.93
PF13599	Pentapeptide_4	0.93
PF13450	NAD_binding_8	0.93
PF09996	DUF2237	0.93
PF01479	S4	0.93
PF00528	BPD_transp_1	0.93
PF05050	Methyltransf_21	0.93
PF00535	Glycos_transf_2	0.93
PF00892	EamA	0.93
PF14832	Tautomerase_3	0.93
PF13578	Methyltransf_24	0.93
PF00534	Glycos_transf_1	0.93
PF13847	Methyltransf_31	0.93
PF01925	TauE	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	3.74
COG3909	Cytochrome c556	Energy production and conversion [C]	3.74
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.93
COG1397	ADP-ribosylglycohydrolase	Posttranslational modification, protein turnover, chaperones [O]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.85 %
Unclassified	root	N/A	12.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.85 %
Unclassified	root	N/A	12.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.85 %
Unclassified	root	N/A	12.15 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.92 %
Unclassified	root	N/A	12.15 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	56.07 %
Unclassified	root	N/A	12.15 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	55.14 %
Unclassified	root	N/A	12.15 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	54.21 %
Unclassified	root	N/A	12.15 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	53.27 %
Unclassified	root	N/A	12.15 %
Polynucleobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	33.64 %
Unclassified	root	N/A	12.15 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	0.93 %
unclassified Polynucleobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → unclassified Polynucleobacter	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	33.64 %
Unclassified	root	N/A	12.15 %
Polynucleobacter sp. 71A-WALBACH	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → unclassified Polynucleobacter → Polynucleobacter sp. 71A-WALBACH	0.93 %
Candidatus Pelagibacter sp. IMCC9063	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000223\|LPjun09P410mDRAFT_1015714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	641	Open in IMG/M
3300001349\|JGI20160J14292_10105230	Not Available	991	Open in IMG/M
3300001947\|GOS2218_1002068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	830	Open in IMG/M
3300002913\|JGI26060J43896_10187662	Not Available	513	Open in IMG/M
3300005239\|Ga0073579_1082298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1425	Open in IMG/M
3300006190\|Ga0075446_10037093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1551	Open in IMG/M
3300006190\|Ga0075446_10095464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	875	Open in IMG/M
3300006193\|Ga0075445_10001400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	12337	Open in IMG/M
3300006399\|Ga0075495_1059098	Not Available	762	Open in IMG/M
3300007558\|Ga0102822_1035925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1183	Open in IMG/M
3300009420\|Ga0114994_10904071	Not Available	572	Open in IMG/M
3300009420\|Ga0114994_11048003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	527	Open in IMG/M
3300009425\|Ga0114997_10154374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1354	Open in IMG/M
3300009425\|Ga0114997_10189541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1190	Open in IMG/M
3300009425\|Ga0114997_10751201	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300009432\|Ga0115005_11744854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	511	Open in IMG/M
3300009526\|Ga0115004_10111776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1670	Open in IMG/M
3300009526\|Ga0115004_10833294	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300009705\|Ga0115000_10393745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	883	Open in IMG/M
3300009705\|Ga0115000_10415145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300009785\|Ga0115001_10982228	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300009786\|Ga0114999_10718599	Not Available	746	Open in IMG/M
3300017725\|Ga0181398_1155251	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300017740\|Ga0181418_1170142	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300017763\|Ga0181410_1172416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	601	Open in IMG/M
3300017768\|Ga0187220_1041196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1391	Open in IMG/M
3300018980\|Ga0192961_10245592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	527	Open in IMG/M
3300020240\|Ga0211494_1085425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	611	Open in IMG/M
3300020240\|Ga0211494_1091183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	587	Open in IMG/M
3300020304\|Ga0211684_1031796	Not Available	729	Open in IMG/M
3300020304\|Ga0211684_1040839	Not Available	639	Open in IMG/M
3300020309\|Ga0211681_1049819	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300020372\|Ga0211683_10045199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1458	Open in IMG/M
3300020372\|Ga0211683_10061746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1225	Open in IMG/M
3300020372\|Ga0211683_10122155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	840	Open in IMG/M
3300020372\|Ga0211683_10191956	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300020376\|Ga0211682_10011676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3630	Open in IMG/M
3300020376\|Ga0211682_10212844	Not Available	746	Open in IMG/M
3300020382\|Ga0211686_10012744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3605	Open in IMG/M
3300020382\|Ga0211686_10083709	All Organisms → cellular organisms → Bacteria → Proteobacteria	1299	Open in IMG/M
3300020382\|Ga0211686_10213063	Not Available	796	Open in IMG/M
3300020382\|Ga0211686_10434580	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300020396\|Ga0211687_10032761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2470	Open in IMG/M
3300020396\|Ga0211687_10090053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1311	Open in IMG/M
3300020396\|Ga0211687_10291829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Polynucleobacter → unclassified Polynucleobacter → Polynucleobacter sp. 71A-WALBACH	644	Open in IMG/M
3300020396\|Ga0211687_10357122	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300020431\|Ga0211554_10404445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	632	Open in IMG/M
3300020438\|Ga0211576_10172875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1160	Open in IMG/M
3300023245\|Ga0222655_1067981	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300024319\|Ga0228670_1111415	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300024346\|Ga0244775_10876302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	714	Open in IMG/M
3300025712\|Ga0209305_1183261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	622	Open in IMG/M
3300025894\|Ga0209335_10058900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2232	Open in IMG/M
3300026506\|Ga0228604_1074179	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300027672\|Ga0209383_1036050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1961	Open in IMG/M
3300027672\|Ga0209383_1049298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1586	Open in IMG/M
3300027752\|Ga0209192_10280430	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300027779\|Ga0209709_10001328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	22963	Open in IMG/M
3300027779\|Ga0209709_10282733	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300027780\|Ga0209502_10334879	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300027780\|Ga0209502_10400957	Not Available	562	Open in IMG/M
3300027791\|Ga0209830_10213785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	892	Open in IMG/M
3300027791\|Ga0209830_10285114	Not Available	738	Open in IMG/M
3300027791\|Ga0209830_10406756	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300027801\|Ga0209091_10066299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2025	Open in IMG/M
3300027813\|Ga0209090_10352377	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300028130\|Ga0228619_1124843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	590	Open in IMG/M
3300028194\|Ga0257106_1035422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1938	Open in IMG/M
3300028194\|Ga0257106_1095963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1072	Open in IMG/M
3300028197\|Ga0257110_1054841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1730	Open in IMG/M
3300028198\|Ga0257121_1163955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	738	Open in IMG/M
3300028273\|Ga0228640_1119601	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300028397\|Ga0228639_1011699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3067	Open in IMG/M
3300028397\|Ga0228639_1132073	Not Available	596	Open in IMG/M
3300031142\|Ga0308022_1222901	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300031510\|Ga0308010_1081154	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300031510\|Ga0308010_1318785	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300031519\|Ga0307488_10626447	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300031598\|Ga0308019_10120808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1056	Open in IMG/M
3300031598\|Ga0308019_10184553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	814	Open in IMG/M
3300031599\|Ga0308007_10214011	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300031626\|Ga0302121_10019469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2319	Open in IMG/M
3300031626\|Ga0302121_10179805	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300031629\|Ga0307985_10279357	All Organisms → cellular organisms → Bacteria → Proteobacteria	653	Open in IMG/M
3300031630\|Ga0308004_10109032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1179	Open in IMG/M
3300031630\|Ga0308004_10136683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1031	Open in IMG/M
3300031630\|Ga0308004_10216401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	772	Open in IMG/M
3300031630\|Ga0308004_10242976	Not Available	715	Open in IMG/M
3300031644\|Ga0308001_10083794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1351	Open in IMG/M
3300031644\|Ga0308001_10160200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	915	Open in IMG/M
3300031644\|Ga0308001_10168159	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300031644\|Ga0308001_10358489	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300031655\|Ga0308018_10147876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	808	Open in IMG/M
3300031659\|Ga0307986_10041044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2483	Open in IMG/M
3300031659\|Ga0307986_10210189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	864	Open in IMG/M
3300031659\|Ga0307986_10358314	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300031695\|Ga0308016_10060081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1599	Open in IMG/M
3300031695\|Ga0308016_10066822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1499	Open in IMG/M
3300031695\|Ga0308016_10165237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	866	Open in IMG/M
3300031696\|Ga0307995_1312259	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300031702\|Ga0307998_1198601	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300031705\|Ga0308003_1095503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	960	Open in IMG/M
3300031721\|Ga0308013_10091158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1203	Open in IMG/M
3300031721\|Ga0308013_10153964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	871	Open in IMG/M
3300031721\|Ga0308013_10222786	All Organisms → cellular organisms → Bacteria → Proteobacteria	687	Open in IMG/M
3300031721\|Ga0308013_10357304	All Organisms → cellular organisms → Bacteria → Proteobacteria	502	Open in IMG/M
3300032011\|Ga0315316_10902276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	724	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.07%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	53.27%
Oceanic	Environmental → Aquatic → Marine → Oceanic	28.04%
Coastal	Environmental → Aquatic → Marine → Coastal	7.48%
Strait	Environmental → Aquatic → Marine → Strait	3.74%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.80%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.87%
Inlet	Environmental → Aquatic → Marine → Inlet	0.93%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.93%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	53.27%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	27.10%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.48%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.87%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.93%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.93%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.93%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	27.10%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	25.23%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	23.36%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	5.61%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.74%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	3.74%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.87%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.93%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.93%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.93%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.93%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.93%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.93%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.93%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.93%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.93%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000223	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P4 10m	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001947	Marine microbial communities from the Gulf of Maine, Canada - GS002	Environmental	Open in IMG/M
3300002913	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300006399	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007558	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300018980	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_083 - TARA_N000001372 (ERX1782312-ERR1712127)	Environmental	Open in IMG/M
3300020240	Marine microbial communities from Tara Oceans - TARA_B000000477 (ERX556046-ERR598982)	Environmental	Open in IMG/M
3300020304	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556110-ERR599176)	Environmental	Open in IMG/M
3300020309	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX556064-ERR599104)	Environmental	Open in IMG/M
3300020372	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)	Environmental	Open in IMG/M
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental	Open in IMG/M
3300020382	Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)	Environmental	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300020431	Marine microbial communities from Tara Oceans - TARA_B100001142 (ERX556101-ERR598983)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300023245	Saline water microbial communities from Ace Lake, Antarctica - #423	Environmental	Open in IMG/M
3300024319	Seawater microbial communities from Monterey Bay, California, United States - 85D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025712	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300026506	Seawater microbial communities from Monterey Bay, California, United States - 4D	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300028130	Seawater microbial communities from Monterey Bay, California, United States - 22D	Environmental	Open in IMG/M
3300028194	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m	Environmental	Open in IMG/M
3300028197	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m	Environmental	Open in IMG/M
3300028198	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_100	Environmental	Open in IMG/M
3300028273	Seawater microbial communities from Monterey Bay, California, United States - 51D	Environmental	Open in IMG/M
3300028397	Seawater microbial communities from Monterey Bay, California, United States - 50D	Environmental	Open in IMG/M
3300031142	Marine microbial communities from water near the shore, Antarctic Ocean - #353	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental	Open in IMG/M
3300031599	Marine microbial communities from water near the shore, Antarctic Ocean - #71	Environmental	Open in IMG/M
3300031626	Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface	Environmental	Open in IMG/M
3300031629	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #80	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031644	Marine microbial communities from water near the shore, Antarctic Ocean - #5	Environmental	Open in IMG/M
3300031655	Marine microbial communities from water near the shore, Antarctic Ocean - #282	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031695	Marine microbial communities from water near the shore, Antarctic Ocean - #233	Environmental	Open in IMG/M
3300031696	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262	Environmental	Open in IMG/M
3300031702	Marine microbial communities from David Island wharf, Antarctic Ocean - #37	Environmental	Open in IMG/M
3300031705	Marine microbial communities from water near the shore, Antarctic Ocean - #36	Environmental	Open in IMG/M
3300031721	Marine microbial communities from water near the shore, Antarctic Ocean - #181	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPjun09P410mDRAFT_10157141	3300000223	Marine	QVARENINYLDILFNKNKNINKNKILKNFKKSTILEKKFWQCFI*
JGI20160J14292_101052302	3300001349	Pelagic Marine	KDNINYLDTLLKNNKSKKLDTLKRNFKKSTILERNFWECFV*
GOS2218_10020681	3300001947	Marine	DYLDILLKNNKGKKLNTLKRNFKKATILERNFWECFV*
JGI26060J43896_101876621	3300002913	Marine	KDNIDYLDILLKNNKGKKLNTLKRSFKKSTILERNFWECFV*
Ga0073579_10822984	3300005239	Marine	MYSSKEYQQVAKDNIDYLDILLKNNKGKKLNILKRNFKKSTILERNFWECFV*
Ga0075446_100370934	3300006190	Marine	NIDYLDILFKNNKNKNLSKLKSNFKKSTILERNFWQCFVDKKN*
Ga0075446_100954643	3300006190	Marine	NYLDILFKNNKNKNLSKLKSNFKKSTILERNFWECFV*
Ga0075445_1000140017	3300006193	Marine	QVAKDNIDYLDILFKNNKNKNLSKLKSNFKKSTILERNFWQCFVDKKN*
Ga0075495_10590981	3300006399	Aqueous	NIDYLDILLKNNKGKKLNTLKRNFKKSTILERNFWECFV*
Ga0102822_10359253	3300007558	Estuarine	AKDNIDYLDILLKNDKRKKLNTLERNFKKSTILERNFWECFV*
Ga0114994_109040711	3300009420	Marine	AKDNIDYLDILLKNNKGKKLNILKRNFKKSTILERNFWECFV*
Ga0114994_110480031	3300009420	Marine	KDNIDYLDILFKNNKNKNITKLKSNFKKSTILERNFWGCFI*
Ga0114997_101543743	3300009425	Marine	MYSSNEYQNVAKDNIKYLDLLFRVEKNKNFNKISKYFKKSTILEKNFWSMIQI*
Ga0114997_101895411	3300009425	Marine	YQQLAKDNIDYLDILLKNNKRKKLNTLKRNFKKSTILERNFWECFI*
Ga0114997_107512011	3300009425	Marine	KEYQQVAKDNIEYLDILLKNNKGKKLNTLKRNFKKSTILERNFWESFV*
Ga0115005_117448541	3300009432	Marine	MYSSKEYQKVAKDNIDYLDILFKSNKNKNLNKLKKNFKKSTLLERNFWESFL*
Ga0115004_101117761	3300009526	Marine	LAKDNIDYLDILLKNNKRKKLNTLKRNFKKSTILERNFWECFI*
Ga0115004_108332942	3300009526	Marine	QVAKDNIEYLDILLKNNKGKKLNTLKRNFKKSTILERNFWECFV*
Ga0115000_103937451	3300009705	Marine	QVAKDNIDYLDILLKNNKGKKLNTLKRNFKKSTILERNFWGCFV*
Ga0115000_104151452	3300009705	Marine	MYSSNEYQNVAKDNIKYLDLLFRVEKNKNFNKISKYIKKSTILEKNFWSMIQI*
Ga0115001_109822281	3300009785	Marine	MYSSKEYQQVAKDNIDYLDILFKKSKNKNMNKLKINFKKSTILERNFWECFV*
Ga0114999_107185992	3300009786	Marine	MYSSKEYQQVAKDNIDYLDILLKNNKGKKLNTLKRSFKKSTILERNFWECFV*
Ga0181398_11552511	3300017725	Seawater	VYLIFYPYYFSKEYQQVAKDNIDYLDILLKNNKGKKLNILKRNFKKSTILERNFWECFV
Ga0181418_11701421	3300017740	Seawater	KEYQRVAKNNIEYLDILLKNNKGRKFNTLKKNFKKSTILERNFWQCFV
Ga0181410_11724161	3300017763	Seawater	MYASRDYQQVAKDNINYLDHLLKKNKNLDEAKLIKNFKKSTILERNFWQCFV
Ga0187220_10411961	3300017768	Seawater	YQQVASENIDYLDILLKRNKNINKNKLIKNFKKSTILERNFWQCFV
Ga0192961_102455921	3300018980	Marine	MYSSKEYQQVAKDNIDYLDILLKNNKNKKLSTLKRNFKRSTILEKNFWESFV
Ga0211494_10854251	3300020240	Marine	INYLDHLLKKNQNIDKTKIIKNFKKSTILERNFWQCFV
Ga0211494_10911833	3300020240	Marine	INYLDHLLKKNQNIDKTKLIKNFKKSTILERNFWQCFV
Ga0211684_10317961	3300020304	Marine	KEYQQVAKDNIDYLDILLKNNKGKELNILKRNFKKSTILERHFWECFV
Ga0211684_10408392	3300020304	Marine	AKDNIDYLDILFKNNTNKNLNKLKKNFKKSTTLEKKFWECFI
Ga0211681_10498191	3300020309	Marine	INYLDILLKNNKGKKLNILKRNFKKSTILERNFWECFV
Ga0211683_100451993	3300020372	Marine	KEYQQVAKDNIDYLDILFKNNKNKNLNKLKKNFKKSTMLERNFWGCFV
Ga0211683_100617461	3300020372	Marine	QKIAKDNISYLDILFKDNKDKNLTKLKKNFKKSTILERNFWECFI
Ga0211683_101221552	3300020372	Marine	YLDILFKSTKNKNLNKLKSNFKKSTILEEKFWGCFLDI
Ga0211683_101919562	3300020372	Marine	QQVAKDNIDYLDILFKNNKNKNLSKLKSNFKKSTILERNFWECFV
Ga0211682_100116761	3300020376	Marine	KEYQQVAKDNIDYLDILFKSSKNKNFSKLKSNFKKSAILERNFWECFV
Ga0211682_102128442	3300020376	Marine	DNIDYLDILFKNYNNKNLIKLKKNFKRSVILEKNFWTCFATK
Ga0211686_100127441	3300020382	Marine	NINYLDILLKNNKIKKINTLKKNFKKSTILERNFWECFV
Ga0211686_100837093	3300020382	Marine	KEYQQVAKDNIDYLDILFKKNKNKNMNKLEKNFKKSTILEKIFWECFI
Ga0211686_102130631	3300020382	Marine	MYSSKKYQQVARDNIDYLDTLFKSSKEKNLTKLRKNFKKSTILERNFWEYFV
Ga0211686_104345801	3300020382	Marine	KEYQQVAKDNIDYLDILFKSSTSKNLSKQKDNFKKSTILERNFWDCFV
Ga0211687_100327614	3300020396	Marine	SSKEYQQIAKDNINYLDNLLKKNKSNKISTLKKNFKKSTILERNFWECFI
Ga0211687_100900534	3300020396	Marine	SKEYQLVAKDNINYLDILLKNSKSKKLDKLKRNFKKSTILERNFWECFV
Ga0211687_102918291	3300020396	Marine	YSSKEYQRVAKDNIHYLDILLKNNKGKKLNTLKKNFKKSTILERNFWECFI
Ga0211687_103571221	3300020396	Marine	SKEYQQIAKDNIDYLDTLSKNFRDKNLTKLKKNFKKSTILEKNFWGCFV
Ga0211554_104044451	3300020431	Marine	MYSSKEYQRVAKNNIEYLDILLKNNKGRKFNTLKKNFKKSTILERNFWQCFV
Ga0211576_101728753	3300020438	Marine	YQQVAKDNIDYLDILLKNNKDKKINILKRNFKKSTILERNFWECFV
Ga0222655_10679812	3300023245	Saline Water	LDILLKNNKGKKLNTLKRNFKKSTILERNFWECFV
Ga0228670_11114152	3300024319	Seawater	KEYQMVAKNNIEYLDILLKNNKGRKFNTLKKNFKKSTILERNFWQCFV
Ga0244775_108763023	3300024346	Estuarine	NIEYLDILLKNNKGRKFNTLKKNFKKSTILERNFWQCFV
Ga0209305_11832611	3300025712	Pelagic Marine	VAKENINYLDILFKKNKNINTNKIIKNFKKSTILEKKFWQCFV
Ga0209335_100589005	3300025894	Pelagic Marine	ENINYLDILFKKNKNINTNKIIKNFKKSTILEKKFWQCFV
Ga0228604_10741791	3300026506	Seawater	ENIDYLDILLKRNKNINKNKLIKNFKKSTILERNFWQCFV
Ga0209383_10360501	3300027672	Marine	DNINYLDILFKNNKNKNLSKLKSNFKKSTILERNFWECFV
Ga0209383_10492984	3300027672	Marine	NINYLDILFKNNKNKNLSKLKSNFKKSTILERNFWECFV
Ga0209192_102804302	3300027752	Marine	KDNIEYLDILLKNNKGKKFNTLKRNFKKSTILERNFWECFV
Ga0209709_100013284	3300027779	Marine	MYSSKEYQQIAKDNIAYLDLLFKNGENNNLTKLKRNFKESTILERNFWECFV
Ga0209709_102827331	3300027779	Marine	KYQQLAKDNIDYLDILLKNNKRKKLNTLKRNFKKSTILERNFWECFI
Ga0209502_103348792	3300027780	Marine	LDILLKNNKGKKLNTLKRNFKKSTILERNFWESFV
Ga0209502_104009571	3300027780	Marine	LDILLKDNKGKKIDILKKNFKKSTILERNFWECFI
Ga0209830_102137853	3300027791	Marine	NIDYLDILLKNNKSKKLSTLKRNFKKSTILERNFWECFV
Ga0209830_102851142	3300027791	Marine	EYQQVAKDNIDYLDILLKNNKGKKLNTLKRNFKKSTILERNFWECFV
Ga0209830_104067561	3300027791	Marine	EYQQVAKDNIEYLDILLKNNKGKKLNTLKRNFKKSTILERNFWESFV
Ga0209091_100662991	3300027801	Marine	QVAKDNIDYLDVLLKNNKRKKLNTLKRNFKKSTILERNFWECFV
Ga0209090_103523772	3300027813	Marine	SSKEYQQLAKDNIDYLDILLKNNKGKKLNTLKRNFKKSTILERNFWECFV
Ga0228619_11248433	3300028130	Seawater	IKYLDVLLKRNKNINKNKLIKNFKKSTILERNFWQCFV
Ga0257106_10354223	3300028194	Marine	YSSWIKMYSSKEYQQVAKDNIDYLDVLLKNNKSKKLNILKRNFKKSTILERNFWECFV
Ga0257106_10959633	3300028194	Marine	SSWIKMYSSKEYQQVAKDNIDYLDILSKNYKDKNLTKLKKNFKKSTILERNFWGCFV
Ga0257110_10548414	3300028197	Marine	MYSSKEYQQVASENIDYLDVLLKRNKDINKNKLIKNFKKSTILERNFWQCFV
Ga0257121_11639553	3300028198	Marine	EYQHVAKENINYLDILFNKNKNINTNKIIKNFKKSTILEKKFWQCFI
Ga0228640_11196012	3300028273	Seawater	KEYQQVASENIDYLDILLKRNKNINKNKLIKNFKKSTILERNFWQCFV
Ga0228639_10116991	3300028397	Seawater	ASENIDYLDILLKRNKNINKNKLIKNFKKSTILERNFWQCFV
Ga0228639_11320732	3300028397	Seawater	NIDYLDILLKNNKDKKLNILKRNFKKSTILERNFWECFV
Ga0308022_12229011	3300031142	Marine	INYLDILFKNNKNKNLSKLKGNFKKSTILERNFWGCFV
Ga0308010_10811543	3300031510	Marine	QQVAKDNINYLDILYMSNKKRNLSKLKSNFKKSTILERNFWECFV
Ga0308010_13187851	3300031510	Marine	AKDNIDYLDILFKNNKNKNLNKLKSNFKKSTILERNFWECFI
Ga0307488_106264471	3300031519	Sackhole Brine	KEYQKVAKDNIDYLDILLKNNKGKKLNTLKRSFKKSTILERNFWECFV
Ga0308019_101208081	3300031598	Marine	MYSSKEYQQVAKDNIDYLDILFKNNKKKNLTKLKKNFKKSTILEKNFWECFV
Ga0308019_101845533	3300031598	Marine	NINYLDILFKNNKNKNLSKLKSNFKKSTILERNFWGCFV
Ga0308007_102140112	3300031599	Marine	YSSKEYQQVAKDNIDYLDILFKNSKNKNLSKLKSHFKKSTILERNFWECFV
Ga0302121_100194694	3300031626	Marine	DNIDYLDILLKNNKGKKLNTLKRNFKKSTILERNFWECFV
Ga0302121_101798052	3300031626	Marine	DNIEYLDILLKNNKGKKLNTLKRNFKKSTILERNFWECFV
Ga0307985_102793572	3300031629	Marine	KIAKDNINYLDILFKKNRNNNLTELKKNFKKSTILEINFWECFV
Ga0308004_101090321	3300031630	Marine	SKEYQQVAKDNIDYLDILFKNNMNKNLSKLKSNFKKSTILERNFWECFV
Ga0308004_101366831	3300031630	Marine	VAKDNINYLDILFKNSKNKNLSKLKSNFKKSTILEKKFWECFL
Ga0308004_102164011	3300031630	Marine	YSSKEYQQVAKDNIDYLDILFKNNKNKNLSKLKGNFKKSTILERNFWECFV
Ga0308004_102429762	3300031630	Marine	LDILFKNSKDKNLTKLKNNFKKSTILERNFWECFV
Ga0308001_100837944	3300031644	Marine	AKDNINYLDILFKNNKNKNLSKLKSNFKKSTILERNFWECFV
Ga0308001_101602003	3300031644	Marine	SSKGYQQIAKDNINYLDILFKNKKDRNLTKLKKNFKRSTILERNFWQCFV
Ga0308001_101681592	3300031644	Marine	MYSSKEYQQVAKDNIDYLDILFKNSKNKNLNKLKSNFKKSTILERKFWECFV
Ga0308001_103584891	3300031644	Marine	NYLDILFKNNKNKNLSKLKSNFKKSTILERNFWECFV
Ga0308018_101478763	3300031655	Marine	VAKDNINYLDILFKNNKNKNLSKLKSNFKKSTILERNFWECFV
Ga0307986_100410444	3300031659	Marine	YLDILLKNNKGKKLDTLKKNFKKSTILERNFWEGFV
Ga0307986_102101893	3300031659	Marine	YQQVAIDNIHYLDILFKNNKDKNENKLRKNFKKSTILERNFWECFV
Ga0307986_103583141	3300031659	Marine	KDNINYLDILFKNNKNKNLSKLKSNFKKSTILERNFWECFV
Ga0308016_100600811	3300031695	Marine	KEYQRVAKDNIDYLDILFKNSKDKNLTKLKNNFKKSTILERNFWECFV
Ga0308016_100668224	3300031695	Marine	QVAKDNINYLDILFKNNKNKNLSKLKSNFKKSTILERNFWECFV
Ga0308016_101652371	3300031695	Marine	NIDYLNILFKNNRYKNLIKLKKIFKKSTILEKNFWECFI
Ga0307995_13122591	3300031696	Marine	SKKYQKIAKDNISYLDILFKDNKDKNLTRLKKNFKKSTILERNFWECFV
Ga0307998_11986011	3300031702	Marine	YQQVAKDNIDYLDILFKNNKNKNLNKLKSNFKKSTILERNFWGCFV
Ga0308003_10955031	3300031705	Marine	KDNIDYLDILFKKDKNKNLNKLKNNFKRSTILERNFWECFI
Ga0308013_100911583	3300031721	Marine	NIDYLDILLKNNKGKKLDTLKKNFKKSTILERNFWEGFV
Ga0308013_101539641	3300031721	Marine	YLDILFKNNKNKNLSKLKSNFKKSTILERNFWECFV
Ga0308013_102227862	3300031721	Marine	SKEYQQVAKDNIDYLDILLKSYKGKKLNTLKKNFKKATILERNFWECFI
Ga0308013_103573041	3300031721	Marine	KDNINYLDILYMSNKKRNLSKLKSNFKKSTILERNFWECFV
Ga0315316_109022761	3300032011	Seawater	YASREYQQVAKDNINYLDHLLKKNKNFDEAKLIKNFKKSTILERNFWQCFV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092361

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences