NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092356

Metagenome Family F092356

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092356
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 44 residues
Representative Sequence MDIKYNKIIGAFVNTANDEKVTQAELLQWAAENPMPLDEPK
Number of Associated Samples 85
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 90.48 %
% of genes near scaffold ends (potentially truncated) 95.33 %
% of genes from short scaffolds (< 2000 bps) 89.72 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (87.850 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(32.710 % of family members)
Environment Ontology (ENVO) Unclassified
(76.636 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(78.505 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 14.49%    β-sheet: 13.04%    Coil/Unstructured: 72.46%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF03237Terminase_6N 5.61
PF05203Hom_end_hint 0.93



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A87.85 %
All OrganismsrootAll Organisms12.15 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001450|JGI24006J15134_10045864All Organisms → Viruses → Predicted Viral1822Open in IMG/M
3300001460|JGI24003J15210_10070845Not Available1087Open in IMG/M
3300001460|JGI24003J15210_10124297Not Available698Open in IMG/M
3300001589|JGI24005J15628_10140464Not Available748Open in IMG/M
3300001728|JGI24521J20086_1003615Not Available1608Open in IMG/M
3300001960|GOS2230_1004181All Organisms → cellular organisms → Bacteria1669Open in IMG/M
3300002511|JGI25131J35506_1049077Not Available585Open in IMG/M
3300004448|Ga0065861_1066919Not Available1107Open in IMG/M
3300004448|Ga0065861_1109994Not Available565Open in IMG/M
3300006190|Ga0075446_10177803Not Available600Open in IMG/M
3300006737|Ga0098037_1195754All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes663Open in IMG/M
3300006802|Ga0070749_10122123Not Available1529Open in IMG/M
3300006916|Ga0070750_10218862Not Available836Open in IMG/M
3300006916|Ga0070750_10263800Not Available745Open in IMG/M
3300006947|Ga0075444_10106803Not Available1217Open in IMG/M
3300007345|Ga0070752_1073434Not Available1510Open in IMG/M
3300007540|Ga0099847_1015224Not Available2525Open in IMG/M
3300007540|Ga0099847_1155185Not Available680Open in IMG/M
3300007541|Ga0099848_1119562All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes996Open in IMG/M
3300008216|Ga0114898_1031484Not Available1770Open in IMG/M
3300008216|Ga0114898_1139978Not Available701Open in IMG/M
3300008220|Ga0114910_1145942Not Available676Open in IMG/M
3300009071|Ga0115566_10221648Not Available1145Open in IMG/M
3300009149|Ga0114918_10361092Not Available799Open in IMG/M
3300009428|Ga0114915_1077094Not Available1025Open in IMG/M
3300009428|Ga0114915_1215096Not Available525Open in IMG/M
3300009474|Ga0127390_1041348Not Available1306Open in IMG/M
3300009481|Ga0114932_10301436Not Available960Open in IMG/M
3300009507|Ga0115572_10672504Not Available566Open in IMG/M
3300009622|Ga0105173_1068670Not Available619Open in IMG/M
3300010148|Ga0098043_1109733Not Available800Open in IMG/M
3300010368|Ga0129324_10285730Not Available651Open in IMG/M
3300010368|Ga0129324_10352580Not Available573Open in IMG/M
3300012920|Ga0160423_10999219Not Available560Open in IMG/M
3300012953|Ga0163179_10266075Not Available1342Open in IMG/M
3300017730|Ga0181417_1112508Not Available659Open in IMG/M
3300017732|Ga0181415_1028262Not Available1296Open in IMG/M
3300017732|Ga0181415_1138760Not Available545Open in IMG/M
3300017740|Ga0181418_1083998Not Available776Open in IMG/M
3300017753|Ga0181407_1058499Not Available1000Open in IMG/M
3300017957|Ga0181571_10606563Not Available661Open in IMG/M
3300018410|Ga0181561_10448977Not Available582Open in IMG/M
3300018420|Ga0181563_10198881Not Available1223Open in IMG/M
3300021960|Ga0222715_10413610Not Available734Open in IMG/M
3300021961|Ga0222714_10131309Not Available1530Open in IMG/M
3300021961|Ga0222714_10243554Not Available1012Open in IMG/M
3300021962|Ga0222713_10348329Not Available927Open in IMG/M
3300022053|Ga0212030_1066896Not Available513Open in IMG/M
3300022074|Ga0224906_1125735Not Available738Open in IMG/M
3300022176|Ga0212031_1026316Not Available928Open in IMG/M
3300022200|Ga0196901_1072424All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1243Open in IMG/M
3300022825|Ga0222669_1036693Not Available836Open in IMG/M
3300023239|Ga0222660_1028703Not Available957Open in IMG/M
(restricted) 3300024518|Ga0255048_10022497Not Available3232Open in IMG/M
(restricted) 3300024520|Ga0255047_10436334Not Available659Open in IMG/M
3300025045|Ga0207901_1004153Not Available2207Open in IMG/M
3300025046|Ga0207902_1027078Not Available692Open in IMG/M
3300025046|Ga0207902_1031111Not Available653Open in IMG/M
3300025052|Ga0207906_1043940Not Available605Open in IMG/M
3300025071|Ga0207896_1002658Not Available3385Open in IMG/M
3300025071|Ga0207896_1029980Not Available925Open in IMG/M
3300025101|Ga0208159_1070482Not Available678Open in IMG/M
3300025102|Ga0208666_1046672Not Available1230Open in IMG/M
3300025102|Ga0208666_1059661All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1039Open in IMG/M
3300025110|Ga0208158_1157635Not Available513Open in IMG/M
3300025120|Ga0209535_1046691Not Available1882Open in IMG/M
3300025125|Ga0209644_1028006Not Available1247Open in IMG/M
3300025125|Ga0209644_1075916Not Available785Open in IMG/M
3300025132|Ga0209232_1060040Not Available1364Open in IMG/M
3300025132|Ga0209232_1094081Not Available1020Open in IMG/M
3300025137|Ga0209336_10171340Not Available557Open in IMG/M
3300025137|Ga0209336_10176680Not Available543Open in IMG/M
3300025138|Ga0209634_1050699All Organisms → cellular organisms → Bacteria2051Open in IMG/M
3300025138|Ga0209634_1108058Not Available1215Open in IMG/M
3300025151|Ga0209645_1018092Not Available2717Open in IMG/M
3300025151|Ga0209645_1065747Not Available1235Open in IMG/M
3300025241|Ga0207893_1051133Not Available593Open in IMG/M
3300025264|Ga0208029_1022969Not Available1528Open in IMG/M
3300025276|Ga0208814_1020335All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aequorivita → unclassified Aequorivita → Aequorivita sp.2223Open in IMG/M
3300025282|Ga0208030_1058501Not Available1069Open in IMG/M
3300025543|Ga0208303_1005275Not Available4436Open in IMG/M
3300025543|Ga0208303_1047075Not Available1064Open in IMG/M
3300025646|Ga0208161_1168533Not Available529Open in IMG/M
3300025853|Ga0208645_1026799Not Available3057Open in IMG/M
3300025873|Ga0209757_10028197Not Available1590Open in IMG/M
3300025873|Ga0209757_10273447Not Available537Open in IMG/M
3300025873|Ga0209757_10289683Not Available521Open in IMG/M
3300027522|Ga0209384_1143578Not Available528Open in IMG/M
3300027788|Ga0209711_10111053Not Available1370Open in IMG/M
3300028022|Ga0256382_1102706Not Available686Open in IMG/M
3300029787|Ga0183757_1063881Not Available577Open in IMG/M
3300031519|Ga0307488_10176939All Organisms → Viruses → Predicted Viral1468Open in IMG/M
3300031565|Ga0307379_11114222Not Available662Open in IMG/M
3300031566|Ga0307378_10227411All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1812Open in IMG/M
3300031578|Ga0307376_10588249Not Available710Open in IMG/M
3300031578|Ga0307376_10743424All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes611Open in IMG/M
3300031622|Ga0302126_10171508Not Available792Open in IMG/M
3300031626|Ga0302121_10062515All Organisms → Viruses → Predicted Viral1136Open in IMG/M
3300031669|Ga0307375_10864298All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes505Open in IMG/M
3300031673|Ga0307377_10699343Not Available712Open in IMG/M
3300032820|Ga0310342_100402456Not Available1493Open in IMG/M
3300032820|Ga0310342_100527106Not Available1323Open in IMG/M
3300033742|Ga0314858_124492Not Available659Open in IMG/M
3300034654|Ga0326741_027071Not Available1006Open in IMG/M
3300034656|Ga0326748_024327Not Available821Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine32.71%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous13.08%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean8.41%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater5.61%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil5.61%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine3.74%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.74%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh2.80%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.87%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.87%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.87%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.87%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater1.87%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.87%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.87%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water1.87%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.93%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.93%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.93%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.93%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.93%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.93%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.93%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.93%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.93%
Meromictic PondEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300001728Marine viral communities from the Pacific Ocean - LP-46EnvironmentalOpen in IMG/M
3300001960Marine microbial communities from South of Charleston, South Carolina, USA - GS014EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009474Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 3m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017732Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11EnvironmentalOpen in IMG/M
3300017740Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017957Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018410Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022825Saline water microbial communities from Ace Lake, Antarctica - #730EnvironmentalOpen in IMG/M
3300023239Saline water microbial communities from Ace Lake, Antarctica - #549EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025071Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)EnvironmentalOpen in IMG/M
3300025101Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025241Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031622Marine microbial communities from Western Arctic Ocean, Canada - CB4_20mEnvironmentalOpen in IMG/M
3300031626Marine microbial communities from Western Arctic Ocean, Canada - CB21_surfaceEnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24006J15134_1004586413300001450MarineMDIKYNEIIGAFVNTANDEKVTQAELLQWAKENPMPLDEPKKSNPQMLNEVID
JGI24003J15210_1007084513300001460MarineMDIKYNKILGAFVNTANDEKVTQAELLQWAKENPMPL
JGI24003J15210_1012429713300001460MarineMDIKYNEIKGCFVDTKTDECVTQAELLEWAAANPMP
JGI24005J15628_1014046423300001589MarineMDIKYNKILGAFVNTANDEKVTQAELLQWAKENPMPLDEPKKSNPQMLNEVIDSLT
JGI24521J20086_100361533300001728MarineMEIKYNPEIGAFVNTATDEVVSQLDLKVWAAENPMPVAQD
GOS2230_100418123300001960MarineMDIKYNADIGAFVNTANDEPVTQAELLEWAAANPEP
KVRMV2_10049699813300002231Marine SedimentMDIKYNSTLGAFVNSATDDVVSQIDLKAWTADNPMDVKVGTP
JGI25131J35506_104907713300002511MarineVDIKYNPILGAFVNTATDEVVSQLDLKIWAAENPMPVAAGSLTTREEKGK
Ga0065861_106691913300004448MarineMDIKYNKIIGAFVNTANDEKVTQAELLQWAAENPMPLDEPKKQNPQMLN
Ga0065861_110999413300004448MarineMDIKYNEIIGAFVNTANDEKVTQRELLTWAMENPMPVEEPVSK
Ga0075446_1017780313300006190MarineMDIKYNEIIGAFVNTANDEKVTQAELLQWAAENPMPLDEPKKQNPQMLNEVIDSLTV
Ga0098037_119575423300006737MarineMNIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLPIDEPKKSNPALMN*
Ga0070749_1012212323300006802AqueousMDIKYNETLGYFVNTANDEPVTQAELLQWADENPEPLEGPKQSNTMVKQLI
Ga0070750_1021886213300006916AqueousMDIKYNETLGYFVNTANDEPVTQAELLQWADENPEPLEGPKQSNT
Ga0070750_1026380023300006916AqueousMNIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLPIDEPKKSNPALM
Ga0075444_1010680313300006947MarineMDIKYNEIIGAFVNTANDEKVTQAELLQWAAENPMPLDEPKKQNPQMLNEVIDSLTVKQT
Ga0070752_107343413300007345AqueousMNIEYNDVIGAFVNTANNQPVTQAELLQWAAENPMPLNEPKKSN
Ga0099847_101522413300007540AqueousMDIKYNEVIGAFVNTANDETVTQAELLQWAAENPMSIEEHKKSNPALMNEVIES
Ga0099847_115518523300007540AqueousMDIKYNETLGYFVNTANDEPVTQAELLQWADENPE
Ga0099848_111956223300007541AqueousMNIEYNEVIGAFVNTANNQPVTQAELLQWAAENPMPLNEP
Ga0114898_103148423300008216Deep OceanVDIKYNPILGAFVNSATDEVVSQLDLKIWAAENPMPVAAGSLTTRE
Ga0114898_113997823300008216Deep OceanVDIKYNPILGAFVNSATDEVVSQLDLKIWAAENPMPVAAGSLT
Ga0114910_114594213300008220Deep OceanVDIKYNPILGAFVNSATDEVVSQLDLKIWAAENPMPVAA
Ga0115566_1022164813300009071Pelagic MarineMNIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLPIDEPKKSNPALMNE
Ga0114918_1036109213300009149Deep SubsurfaceMDIKYNETLGYFVNTANDEPVTQAELLQWAAENPMPLNEPKKSNSDLMNS
Ga0114915_107709413300009428Deep OceanMDIKYNEIIGAFVNTANDEKVTQAELLQWAAENPMPLDEPKKQNPQMLNEVIDSL
Ga0114915_121509613300009428Deep OceanMDIKYNKILGAFVNTANDEKVTQAELLQWAAENPMPLDEPKKQNPQMLNEVIDSL
Ga0127390_104134813300009474Meromictic PondMDIKYNPIIGSFVNTANDEPVTQAELLQWATENPEPLD
Ga0114932_1030143623300009481Deep SubsurfaceMDIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLPI
Ga0115572_1067250423300009507Pelagic MarineMNIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLPIDEPKKSNPALMNEVIESLTVKET
Ga0105173_106867013300009622Marine OceanicMQIKYNPILGAFVNSATDEVVSQLDLKIWAAENPMPV
Ga0098043_110973323300010148MarineMNIRYNSDIGAFVNTANDEIVTQAELLKWAAENPEPIKEAKKPNT
Ga0129324_1028573013300010368Freshwater To Marine Saline GradientMDIKYNETLGYFVNTANDEPVTQAELLQWADENPEPLEGPKQSNTM
Ga0129324_1035258023300010368Freshwater To Marine Saline GradientMDIKYNETLGYFVNTANDEPVTQAELLQWADENPEPLEGPKQSN
Ga0160423_1099921923300012920Surface SeawaterMDIKYNSDIGAFVNTANDEIVTQAELLEWAAANPEPIK
Ga0163179_1026607523300012953SeawaterMDIKYNDVIGAFVNTANDEPVTQAELLAWAAENPL
Ga0181417_111250823300017730SeawaterMNIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLPIDEPKKSNPAL
Ga0181415_102826213300017732SeawaterMNIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLPIDEPKKSN
Ga0181415_113876013300017732SeawaterMDIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLPIDEPKKSN
Ga0181418_108399823300017740SeawaterMNIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLPIDEPK
Ga0181407_105849913300017753SeawaterMNIKYNDVIGAFVNTANDEPVTQAELLSWAAENPLPIDEPKKSNPALMNEVS
Ga0181571_1060656323300017957Salt MarshMNIRYNPDIGAFVNTENDQRVSQAELLEWAAANPEPLKEDE
Ga0181561_1044897713300018410Salt MarshMNIRYNSDIGAFVNTANDEIVTQAELLKWAAANPEPI
Ga0181563_1019888123300018420Salt MarshMNIRYNPDIGAFVNTENDQRVSQAELLEWAAANPEPLK
Ga0222715_1041361023300021960Estuarine WaterMNIEYNDVIGAFVNTANNQPVTQAELLQWAAENPMPLNEP
Ga0222714_1013130913300021961Estuarine WaterMNIEYNDVIGAFVNTANNQPVTQAELLQWAAENPMPLNE
Ga0222714_1024355433300021961Estuarine WaterMDIKYNETLGYFVNTANDEPVTQEELLQWADENPEPLEGPKQSNT
Ga0222713_1034832913300021962Estuarine WaterMNIEYNDVIGAFVNTANNQPVTQAELLQWAAENPMPL
Ga0212030_106689613300022053AqueousMNIEYNDVIGAFVNTANNQPVTQAELLQWAAENPMPLNEPKKSNSDLMNSLIDSLTV
Ga0224906_112573513300022074SeawaterMNIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLPIDEPKK
Ga0212031_102631623300022176AqueousMNIEYNDVIGAFVNTANNQPVTQAELLQWAAENPMPLNEPKKSNSDLMNSLIDSLTVKET
Ga0196901_107242423300022200AqueousMNIEYNDVIGAFVNTANNQPVTQAELLQWAAENPMPLN
Ga0222669_103669313300022825Saline WaterMDIKYNEIIGAFVNTANDEKVTQAELLEWAAENPMPLD
Ga0222660_102870313300023239Saline WaterMDIKYNEIIGAFVNTANDEKVTQAELLEWAAENPMPLDEPKKQDPQMLNEVIESLT
Ga0209992_1011054833300024344Deep SubsurfaceMDIKYNSTLGAFVNSATDDVVSQGNLKMWAATHPEPVKVG
(restricted) Ga0255048_1002249723300024518SeawaterMQIKYNPEIGAFVNTATDEVVSQLDLKVWAAENPMPVAQDLTKPGD
(restricted) Ga0255047_1043633423300024520SeawaterMEIKYNPILGAFVNTANDEIVSQQELKIWAAENPMPVEQG
Ga0207901_100415313300025045MarineMEIKYNPEIGAFVNTATDEVVSQLDLKVWAAENPMPVAQDL
Ga0207902_102707823300025046MarineVDIKYNSTLGAFVNTATDEVVSQLDLKIWAAENPMPVEEG
Ga0207902_103111123300025046MarineMEIKYNPILGAFVNTANDEIVSQQELKIWAAENPMPVEQGL
Ga0207906_104394013300025052MarineMEIKYNPEIGAFVNTATDEVVSQLDLKVWAAENPMPV
Ga0207896_100265833300025071MarineMNIKYNDILGAFVNTANDEKVTQAELLQWAAENPMPLDEPK
Ga0207896_102998013300025071MarineMNIKYNDILGAFVNTANDEKVTQAELLQWAAENPMPLDE
Ga0208159_107048223300025101MarineMSIKYNPDIGAFVNTETNEKVTQAELLMWTAQNPM
Ga0208666_104667223300025102MarineMDIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLPIDEPKKSNPAL
Ga0208666_105966123300025102MarineMNIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLPINEPKKSNP
Ga0208158_115763523300025110MarineMNIKYNDVIGAFVNTANDEPVTQAELLAWASENPLPIDEPKKS
Ga0209535_104669123300025120MarineMDIKYNEIKGCFVDTKTDECVTQAELLQWAKENPMPLDEPKKSNPQMLNEVIDSLTVKE
Ga0209644_102800633300025125MarineMQIKYNPILGAFVNTANDEIVSQQELKIWAAENPMPVEQGLTK
Ga0209644_107591623300025125MarineVDIKYNSTLGAFVNTATDEVVSQLDLKIWAAENPMPVEEGL
Ga0209232_106004023300025132MarineMDIKYNADIGAFVNTANDEPVTQAELLEWAAANPEPI
Ga0209232_109408123300025132MarineMDIKYNSDIGAFVNTANDEPVTQAELLEWAAANPEP
Ga0209336_1017134013300025137MarineMDIKYNEIKGCFVDTKTDECVTQAELLQWAKENPMPLDEPKKSNPQMLNEVIDSLTV
Ga0209336_1017668013300025137MarineMDIKYNKILGAFVNTANDEKVTQAELLQWAKENPMPLDEPKKSNPQMLNEVIDSLTVKK
Ga0209634_105069913300025138MarineMDIKYNEIKGCFVDTKTDECVTQAELLQWAKENPMPLDEPKKSNPQMLNEVIDSLTVKKT
Ga0209634_110805823300025138MarineMDIKYNKILGAFVNTANDEKVTQAELLQWAKENPMP
Ga0209645_101809213300025151MarineMNIKYNDVIGAFVNTANDEPVTQAELLAWAAENPL
Ga0209645_106574713300025151MarineMNIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLPIDEPKKSNPALMNEVIE
Ga0207893_105113313300025241Deep OceanVDIKYNSTLGAFVNTANDEIVSQQELKIWAAENPMPV
Ga0208029_102296913300025264Deep OceanMEIKYNPILGAFVNTANDEIVSQQELKIWAAENPMPVAAGSLTTRKEKG
Ga0208814_102033513300025276Deep OceanMDIKYNEILGEFVNTANDEKVTQAELLQWAAENPMPI
Ga0208030_105850123300025282Deep OceanVDIKYNPILGAFVNSATDEVVSQLDLKIWAAENPMPVAAGSLTTREE
Ga0208303_100527513300025543AqueousMNIEYNDVIGAFVNTANNQPVTQAELLQWAAENPMPLNEPKK
Ga0208303_104707523300025543AqueousMDIKYNETLGYFVNTANDEPVTQAELLQWADENPEP
Ga0208161_116853323300025646AqueousMDIKYNETLGYFVNTANDEPVTQAELLQWADENPEPLDTPKKSNPKMMNELIDSLTVT
Ga0208645_102679943300025853AqueousMDIKYNETLGYFVNTANDEPVTQAELLQWADENPEPLEGPKQSNTAMVKQLIES
Ga0209757_1002819713300025873MarineVDIKYNPILGAFVNTATDEVVSQLDLKIWAAENPM
Ga0209757_1027344723300025873MarineMEIKYNPILGAFVNTANDEIVSQQELKIWAAENPMP
Ga0209757_1028968323300025873MarineMQIKYNPILGAFVNTATDEVVSQLDLKIWAAENPMPVEEG
Ga0209384_114357813300027522MarineMDIKYNEILGEFVNTANDEKVTQAELLQWAAENPMP
Ga0209711_1011105323300027788MarineMDIKYNKIIGAFVNTANDEKVTQAELLQWAAENPMPLDEPK
Ga0256382_110270613300028022SeawaterMQIKYNPILGAFVNTANDEIVSQQELKIWAAENPMPVEQV
Ga0183757_106388113300029787MarineMDIKYNDVIGAFVNTANDEPVTQAELLAWAAENPLP
Ga0307488_1017693923300031519Sackhole BrineMDIKYNKILGAFVNTANDEKVTQAELLQWAKENPMPLDEPKKSNPQMLNEVIDSLTV
Ga0307379_1111422213300031565SoilMDIKYNPIIGSFVNTENDEPVTQAELLQWAAENPEPLDTP
Ga0307378_1022741123300031566SoilMNIEYNEVIGALVNTANDEPVTQAELLQWAAENPMPLID
Ga0307376_1058824913300031578SoilMDIKYNPIIGSFVNTANDEPVTQAELLQWAAENPEPLD
Ga0307376_1074342423300031578SoilMNIEYNEVIGALVNTANDEPVTQAELLQWAAENPMPLNEPKKSNSDLM
Ga0302126_1017150813300031622MarineMDIKYNEIIGAFVNTANDEKVTQRELLTWAMENPMPVEEPVSKPQNSQMLNEVIESL
Ga0302121_1006251513300031626MarineMDIKYNEIIGAFVNTANDEKVTQRELLTWAMENPMPVEEPVSKPQN
Ga0307375_1086429813300031669SoilMNIEYNEVIGALVNTANDEPVTQAELLQWAAENPMPLNE
Ga0307377_1069934323300031673SoilMDIKYNPIIGSFVNTANDEPVTQAELLQWAAENPEP
Ga0310342_10040245643300032820SeawaterMEIKYNPILGAFVNTANDEIVSQQELKIWAAENPMPV
Ga0310342_10052710633300032820SeawaterMQIKYNPILGAFVNTANDEIVSQQELKIWAAENPMP
Ga0314858_124492_3_1553300033742Sea-Ice BrineMDIKYNEIIGAFVNTANDEKVTQAELLQWAAENPMPLDEPKKQNPQMLNEV
Ga0326741_027071_861_10043300034654Filtered SeawaterMEIKYNPILGAFVNTATDEVVSQQELKIWAAENPMPVEQGLTTREEKV
Ga0326748_024327_700_8193300034656Filtered SeawaterVDIKYNPILGAFVNTATDEVVSQLDLKIWAAENPMPVAAG


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