Metagenome Family F092305

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092305
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	76 residues
Representative Sequence	MRKLKWSLNQAGTLNGKVGHVTLFTVAYYPERGYFVAPKLPGLNKTIPVNSEEAGKMKAEALYQRYFDFLKGAEW
Number of Associated Samples	58
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.92 %
% of genes near scaffold ends (potentially truncated)	29.91 %
% of genes from short scaffolds (< 2000 bps)	87.85 %
Associated GOLD sequencing projects	52
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.093 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (28.037 % of family members)
Environment Ontology (ENVO)	Unclassified (42.056 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (34.579 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.45% β-sheet: 28.16% Coil/Unstructured: 53.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
e.43.1.2: Capz beta-1 subunit	d3aa7b_	3aa7	0.59833
e.43.1.1: Capz alpha-1 subunit	d3aa0a_	3aa0	0.59115
c.51.6.2: XCC0632-like	d2iqia1	2iqi	0.58057
d.296.1.2: PF0168-like	d1yb3a1	1yb3	0.5802
d.20.1.0: automated matches	d2ebma1	2ebm	0.57534

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF07862	Nif11	2.80
PF08239	SH3_3	1.87
PF13524	Glyco_trans_1_2	1.87
PF03358	FMN_red	0.93
PF01380	SIS	0.93
PF01797	Y1_Tnp	0.93
PF02518	HATPase_c	0.93
PF06144	DNA_pol3_delta	0.93
PF09723	Zn-ribbon_8	0.93
PF13181	TPR_8	0.93
PF02599	CsrA	0.93
PF13086	AAA_11	0.93
PF00589	Phage_integrase	0.93
PF02826	2-Hacid_dh_C	0.93
PF05050	Methyltransf_21	0.93
PF13701	DDE_Tnp_1_4	0.93
PF01938	TRAM	0.93
PF00571	CBS	0.93
PF01050	MannoseP_isomer	0.93
PF13200	DUF4015	0.93
PF00293	NUDIX	0.93
PF07603	DUF1566	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1466	DNA polymerase III, delta subunit	Replication, recombination and repair [L]	0.93
COG1551	sRNA-binding carbon storage regulator CsrA	Signal transduction mechanisms [T]	0.93
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.93
COG2812	DNA polymerase III, gamma/tau subunits	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
All Organisms	root	All Organisms	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
cellular organisms	root	All Organisms → cellular organisms	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	15.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	15.89 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	4.67 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.87 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	3.74 %
unclassified Syntrophobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales	0.93 %
Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_60_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_60_11	0.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Desulfobacca	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca	3.74 %
Syntrophobacterales bacterium RIFOXYC2_FULL_60_23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium RIFOXYC2_FULL_60_23	0.93 %
Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_60_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_60_11	0.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
unclassified Desulfobacca	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → unclassified Desulfobacca	2.80 %
Desulfobacca acetoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	0.93 %
Syntrophobacterales bacterium RIFOXYC2_FULL_60_23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium RIFOXYC2_FULL_60_23	0.93 %
Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_60_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_60_11	0.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.09 %
Desulfobacca sp. RBG_16_60_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → unclassified Desulfobacca → Desulfobacca sp. RBG_16_60_12	1.87 %
Desulfobacca sp. RBG_16_58_9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → unclassified Desulfobacca → Desulfobacca sp. RBG_16_58_9	0.93 %
Desulfobacca acetoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	0.93 %
Syntrophobacterales bacterium RIFOXYC2_FULL_60_23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium RIFOXYC2_FULL_60_23	0.93 %
Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_60_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_60_11	0.93 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_101931792	Not Available	510	Open in IMG/M
3300001213\|JGIcombinedJ13530_103152006	Not Available	1520	Open in IMG/M
3300001213\|JGIcombinedJ13530_103347670	Not Available	906	Open in IMG/M
3300001213\|JGIcombinedJ13530_103509274	Not Available	584	Open in IMG/M
3300001213\|JGIcombinedJ13530_103711823	Not Available	505	Open in IMG/M
3300001213\|JGIcombinedJ13530_103829433	Not Available	565	Open in IMG/M
3300001213\|JGIcombinedJ13530_104694228	Not Available	972	Open in IMG/M
3300001213\|JGIcombinedJ13530_106729675	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300001213\|JGIcombinedJ13530_107772222	Not Available	534	Open in IMG/M
3300001213\|JGIcombinedJ13530_108574990	Not Available	835	Open in IMG/M
3300001213\|JGIcombinedJ13530_108878781	Not Available	670	Open in IMG/M
3300001213\|JGIcombinedJ13530_109390977	Not Available	1479	Open in IMG/M
3300003541\|JGI20214J51650_10457658	Not Available	893	Open in IMG/M
3300003830\|Ga0051980_10441111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → unclassified Desulfobacca → Desulfobacca sp. RBG_16_60_12	566	Open in IMG/M
3300003858\|Ga0031656_10286319	Not Available	557	Open in IMG/M
3300004063\|Ga0055483_10083871	Not Available	975	Open in IMG/M
3300004088\|Ga0051987_10015864	All Organisms → cellular organisms → Bacteria	3127	Open in IMG/M
3300004107\|Ga0065179_1039477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → unclassified Desulfobacca → Desulfobacca sp. RBG_16_60_12	1557	Open in IMG/M
3300004239\|Ga0066650_10094839	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300004239\|Ga0066650_10576248	Not Available	508	Open in IMG/M
3300005216\|Ga0068994_10061312	Not Available	894	Open in IMG/M
3300005216\|Ga0068994_10071164	Not Available	845	Open in IMG/M
3300006224\|Ga0079037_100499101	Not Available	1168	Open in IMG/M
3300006950\|Ga0075524_10518165	Not Available	531	Open in IMG/M
3300008093\|Ga0100393_10465504	Not Available	572	Open in IMG/M
3300009009\|Ga0105105_10417493	Not Available	751	Open in IMG/M
3300009009\|Ga0105105_10891010	Not Available	545	Open in IMG/M
3300009037\|Ga0105093_10112085	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1328	Open in IMG/M
3300009037\|Ga0105093_10438043	Not Available	718	Open in IMG/M
3300009082\|Ga0105099_10364884	Not Available	856	Open in IMG/M
3300009111\|Ga0115026_11463547	Not Available	567	Open in IMG/M
3300009111\|Ga0115026_11525678	Not Available	557	Open in IMG/M
3300009146\|Ga0105091_10447957	Not Available	649	Open in IMG/M
3300009153\|Ga0105094_10760547	Not Available	569	Open in IMG/M
3300009166\|Ga0105100_10598826	Not Available	675	Open in IMG/M
3300009167\|Ga0113563_12096436	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300009636\|Ga0116112_1100308	Not Available	817	Open in IMG/M
3300012931\|Ga0153915_10097194	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3119	Open in IMG/M
3300012931\|Ga0153915_10917733	Not Available	1018	Open in IMG/M
3300012931\|Ga0153915_11128684	Not Available	915	Open in IMG/M
3300012931\|Ga0153915_12305087	Not Available	630	Open in IMG/M
3300012964\|Ga0153916_10348803	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	1529	Open in IMG/M
3300012964\|Ga0153916_11247864	Not Available	821	Open in IMG/M
3300012964\|Ga0153916_12576977	Not Available	573	Open in IMG/M
3300013092\|Ga0163199_1019876	All Organisms → cellular organisms → Bacteria → Proteobacteria	3390	Open in IMG/M
3300013092\|Ga0163199_1120010	All Organisms → cellular organisms → Bacteria → Proteobacteria	1088	Open in IMG/M
(restricted) 3300013137\|Ga0172375_10472203	Not Available	844	Open in IMG/M
(restricted) 3300013138\|Ga0172371_10082569	Not Available	3100	Open in IMG/M
3300014490\|Ga0182010_10402543	Not Available	747	Open in IMG/M
3300014502\|Ga0182021_10055793	Not Available	4602	Open in IMG/M
3300014502\|Ga0182021_11942350	Not Available	708	Open in IMG/M
3300014502\|Ga0182021_11973958	Not Available	702	Open in IMG/M
3300014502\|Ga0182021_13010236	Not Available	564	Open in IMG/M
3300017938\|Ga0187854_10020232	All Organisms → cellular organisms → Bacteria	3736	Open in IMG/M
3300018088\|Ga0187771_10161177	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1848	Open in IMG/M
3300022553\|Ga0212124_10043812	All Organisms → cellular organisms → Bacteria	2678	Open in IMG/M
3300022553\|Ga0212124_10132576	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1381	Open in IMG/M
3300022593\|Ga0236338_1034820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1173	Open in IMG/M
3300022653\|Ga0236337_1141790	Not Available	1113	Open in IMG/M
3300023311\|Ga0256681_12068423	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1548	Open in IMG/M
3300025016\|Ga0210014_1196844	Not Available	570	Open in IMG/M
3300025868\|Ga0210051_1323006	Not Available	615	Open in IMG/M
3300027726\|Ga0209285_10164236	Not Available	690	Open in IMG/M
3300027877\|Ga0209293_10671340	Not Available	548	Open in IMG/M
3300027887\|Ga0208980_10710237	Not Available	568	Open in IMG/M
3300027897\|Ga0209254_10066401	All Organisms → cellular organisms → Bacteria	3097	Open in IMG/M
3300027897\|Ga0209254_10185507	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1675	Open in IMG/M
3300027897\|Ga0209254_10822411	Not Available	626	Open in IMG/M
3300027897\|Ga0209254_11064632	Not Available	520	Open in IMG/M
3300027902\|Ga0209048_10218317	Not Available	1376	Open in IMG/M
3300031834\|Ga0315290_10092164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2542	Open in IMG/M
3300031834\|Ga0315290_11011696	Not Available	699	Open in IMG/M
3300031834\|Ga0315290_11357363	Not Available	584	Open in IMG/M
3300031873\|Ga0315297_11603537	Not Available	523	Open in IMG/M
3300031949\|Ga0214473_11236949	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	771	Open in IMG/M
3300031997\|Ga0315278_10220908	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1952	Open in IMG/M
3300031997\|Ga0315278_10403866	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300031997\|Ga0315278_10409948	Not Available	1399	Open in IMG/M
3300031997\|Ga0315278_10906407	Not Available	884	Open in IMG/M
3300031997\|Ga0315278_11690293	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	602	Open in IMG/M
3300032156\|Ga0315295_10479412	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300032156\|Ga0315295_11138660	Not Available	768	Open in IMG/M
3300032156\|Ga0315295_11962079	Not Available	551	Open in IMG/M
3300032156\|Ga0315295_12007992	Not Available	543	Open in IMG/M
3300032163\|Ga0315281_10155561	Not Available	2585	Open in IMG/M
3300032163\|Ga0315281_12286877	Not Available	510	Open in IMG/M
3300032164\|Ga0315283_10189690	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2210	Open in IMG/M
3300032164\|Ga0315283_11167221	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → unclassified Syntrophobacterales → Syntrophobacterales bacterium RIFOXYC2_FULL_60_23	806	Open in IMG/M
3300032164\|Ga0315283_11246977	Not Available	774	Open in IMG/M
3300032164\|Ga0315283_11512606	Not Available	687	Open in IMG/M
3300032173\|Ga0315268_12430555	Not Available	538	Open in IMG/M
3300032177\|Ga0315276_10673757	Not Available	1110	Open in IMG/M
3300032177\|Ga0315276_11130223	Not Available	828	Open in IMG/M
3300032342\|Ga0315286_10449291	Not Available	1348	Open in IMG/M
3300032342\|Ga0315286_10969677	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_60_11	848	Open in IMG/M
3300032342\|Ga0315286_11877481	Not Available	561	Open in IMG/M
3300032397\|Ga0315287_11453930	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → unclassified Desulfobacca → Desulfobacca sp. RBG_16_58_9	777	Open in IMG/M
3300032397\|Ga0315287_11670965	Not Available	714	Open in IMG/M
3300032401\|Ga0315275_11509450	Not Available	721	Open in IMG/M
3300032401\|Ga0315275_12705267	Not Available	510	Open in IMG/M
3300032516\|Ga0315273_10311506	All Organisms → cellular organisms → Bacteria → Proteobacteria	2136	Open in IMG/M
3300033486\|Ga0316624_10574066	Not Available	977	Open in IMG/M
3300033486\|Ga0316624_10850660	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300033486\|Ga0316624_11235134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	681	Open in IMG/M
3300033513\|Ga0316628_102298863	Not Available	714	Open in IMG/M
3300033521\|Ga0316616_103620682	Not Available	582	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	87.85%
Terrestrial	Environmental → Terrestrial	12.15%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	71.96%
Marine	Environmental → Aquatic → Marine	15.89%
Soil	Environmental → Terrestrial → Soil	12.15%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	36.45%
Wetlands	Environmental → Aquatic → Marine → Wetlands	15.89%
Sediment	Environmental → Aquatic → Freshwater → Sediment	12.15%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.28%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	7.48%
Lentic	Environmental → Aquatic → Freshwater → Lentic	5.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.87%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	28.04%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	13.08%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	12.15%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	9.35%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	8.41%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	7.48%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	5.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.67%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.93%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	28.04%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	13.08%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	8.41%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	6.54%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	5.61%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.61%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	5.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.67%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.67%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	2.80%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.87%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003830	Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/9/14 3 um filter	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300004063	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2	Environmental	Open in IMG/M
3300004088	Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/10/14 0.8 um filter	Environmental	Open in IMG/M
3300004107	Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/8/14 3 um filter (version 2)	Environmental	Open in IMG/M
3300004239	Groundwater microbial communities from aquifer - Crystal Geyser CG23_combo_of_CG06-09_8/20/14_all	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005216	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLA_D2	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300008093	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-17	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental	Open in IMG/M
3300013137 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1m	Environmental	Open in IMG/M
3300013138 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_12m	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300022593	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W2	Environmental	Open in IMG/M
3300022653	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W1	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300025016	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-19 (SPAdes)	Environmental	Open in IMG/M
3300025868	Groundwater microbial communities from aquifer - Crystal Geyser CG23_combo_of_CG06-09_8/20/14_all (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1019317921	3300001213	Wetland	MRQLKWSRNKAGALNGKVGHVTIFVIAYYPERGYFISCKLPGLNTTVPVNSEEDGKRKADVIYKRYF
JGIcombinedJ13530_1031520062	3300001213	Wetland	MRHLKWSQNQAGTLNGKVGHITLFTVAYYPEQGYFVAPKLPGLNKAIPVSSYEDGKMKAEALYQRYFDFLNGAECDLDM*
JGIcombinedJ13530_1033476702	3300001213	Wetland	MRQLIWSRNQTGTLNGKVGFITLFTVAYYSERGYFLAPKLPGLNKTISVSSEEEGKAQAEVIYKRYVNFLLGGEW*
JGIcombinedJ13530_1035092742	3300001213	Wetland	MRQLKWSSNQTGSLNGKVGFLTLFTIAYYPERGYFLSPKLPGLNKTIQISGEEEGKYQAEIIYKRYVNYLLGEDW*
JGIcombinedJ13530_1037118231	3300001213	Wetland	QAGTLNGKVGHVTLFTIAHYPERGYFVTSKLPGLNKTIPVRSHEEGIVKAVTLYKRYLDFLNGADWPLDM*
JGIcombinedJ13530_1038294331	3300001213	Wetland	LNGKVGHVTLFTVAYYLERGYFLAPKLPGLNKTIPVSSYEEGKIKAEELYQQYFDFIAGAKWHLDI*
JGIcombinedJ13530_1046942281	3300001213	Wetland	MRQLRWSRNETGTLNGKVGHLTLFTVAYYPERGHFVAPKLPGLNKTIPVSSTEEGQKKAEALY
JGIcombinedJ13530_1067296752	3300001213	Wetland	MRELKWSVNNTGTLNGKVGFITMFTISYYPERGFFLVPKLPGLNKTIQIRNEEEGKNQAEVIYKKYIKYLLGGEWS*
JGIcombinedJ13530_1077722222	3300001213	Wetland	MRQLKWSKNSSGTLNGKVGHITLFTVAYYPERGYFVAPKLPGLNKTIPVKSEEAGKRKAEALYQGY
JGIcombinedJ13530_1085749902	3300001213	Wetland	MWSRNKVGTLNGKVGFITMFTIDYYPERSYFLVPKLPGLNKTISISNEEEGKSQAEVIYRRYVKYLLGDEWK*
JGIcombinedJ13530_1088787812	3300001213	Wetland	MRRLKWSRNQGGTLNGKVGHVTLFTAAYYPERGYFVAPKLPGLNKTIPVSSEEEGKKKAEALYEKYLDFLNGAEWNLDME*
JGIcombinedJ13530_1093909772	3300001213	Wetland	MRQIKWSRNQTGTLNGKVGPITLFCVAYFPERGYFVVPKLPGLNKTIQVSSEEAGKNEAEGLYYRYLDFLNGAEWHLGA*
JGI20214J51650_104576582	3300003541	Wetland	MRQLKWSKNKTGTLNGKVGHVTLFTVANYPERGHFVAPKLPGLNKTIPVNSEEEGIIKAESLYKRYIYFLEGEKWCLDM*
Ga0051980_104411111	3300003830	Groundwater	MRQLTWSCNKTGTLNGKVGFITLFTIAYYPERGYFLVPKLPGLNKTIQVNTEEEGKYQAEVIYKR
Ga0031656_102863191	3300003858	Freshwater Lake Sediment	MRQLKWSRNEVGTLNGKVGHVTLFSVAYYPERGHFVAPKLPGLNKTIQVSSKEDGKKKAEALYQQYINFIMGAEWC*
Ga0055483_100838713	3300004063	Natural And Restored Wetlands	MRQLKWSQNQTGTLNGKVGHVTLFTVAYYLERGYFVAPKLPGLNKTIPVKSEEEGKFKAEALYKRYLDFLNGAEW*
Ga0051987_100158642	3300004088	Groundwater	MRQLTWSSNKTGTLNGKVGFITLFTIAYYPERGYFLVPKLPGLNKTIQVNTEEEGKYQAEVIYKRYINYLLGGEWQ*
Ga0065179_10394772	3300004107	Groundwater	MRQLTWSCNKTGTLNGKVGFITLFTIAYYPERGYFLVPKLPGLNKTIQVNTEEEGKYQAEVIYKRYINYLLGGEWQ*
Ga0066650_100948393	3300004239	Groundwater	NGKVGFITLFTIAYYPERGYFLVPKLPGLNKTIQVNTEEEGKYQAEVIYKRYINYLLGGEWQ*
Ga0066650_105762481	3300004239	Groundwater	MRKLKWSLNQAGTLNGKVGHVTLFTVAYYPERGYFVAPKLPGLNKTIPVNSEEAGKMKAEALYQRYFDFLKGAEW*
Ga0069718_163226201	3300004481	Sediment	MRQLIWSRNQAGTLNGKVGFLTLFTIAYYPERGYFLAPKLPGLNKTIHISSEEEGKKQAE
Ga0068994_100613123	3300005216	Natural And Restored Wetlands	MRQLKWSRTKDGTLNGKAGHLTLFSIAFYPERGHFVVPKLPGLNKTVPVSSQEEGKMQAEALYQRFVDFLNGAKW*
Ga0068994_100711642	3300005216	Natural And Restored Wetlands	MDIMRKIKWSQDKLGTLNGKVGHITIFTVAYYPERGYFLSPKLPGLNKTIQVNSAEAGKRKAEGLYQRYFDFLRGEKWNKDHDCSVPGFSRRI*
Ga0079037_1004991013	3300006224	Freshwater Wetlands	MRQLRWSRNEAGTLNGKVGHLTLFTVAYYPERGHFVAPKLPGLNKTIPVSSKEEGKRKAEALYQRYFDFLR*
Ga0075524_105181651	3300006950	Arctic Peat Soil	MRQLKWSRNEAGTLNGKVRHITLFTVAYYPERGHFVAPKLPGLNKTIPVDSKEEGKNRAEALYQRYFNFLRGANWT*
Ga0100393_104655041	3300008093	Aquifer	VMRQLTWSCNKTGTLNGKVGFITLFTIAYYPERGYFLVPKLPGLNKTIQVNTEEEGKYQAEVIYKRYINYLLGGEWQ*
Ga0105105_104174931	3300009009	Freshwater Sediment	NQAGTLNGKVGHVTLFTIAYYPERGHFVAPKLPGLNKTIQVSSYEEGKMKAEALYQRFFDFMNGAEWHVDMY*
Ga0105105_108910101	3300009009	Freshwater Sediment	MRQLKWSKNSTGTLNGKVGHVTLFTVANYPERGHFIAPKLPGLNKTIQVNSEEEGIIKAESLYQRYIYFLEGEKWCFDL*
Ga0105093_101120852	3300009037	Freshwater Sediment	MRQLKWSKNSTGTLNGKVGHVTLFTVANYPERGHFVAPKLPGLNKTIQVNSEEEGIIKAESLYQRYIYFLEGEKWCFDL*
Ga0105093_104380431	3300009037	Freshwater Sediment	MRQLKWSLNQAGTLNGKVGHVTIFTVAYYPERGYFVAPKLPGLNKTIQVSSYEEGKMKAEALYKRFFDFMNGAEWHVDMY*
Ga0105099_103648842	3300009082	Freshwater Sediment	MRQLQWSKNSTGTLNGKVGHVTLFTVANYPERGHFIAPKLPGLNKTIQVNSEEEGIIKAESLYQRYIYFLEGEKWCFDL*
Ga0115026_114635471	3300009111	Wetland	MRQLKWSRNQTGTLNGKVGHVTLFTIAYYPERGHFVAPKLPGLNKTIQVISPEEGKKKAETIYQRYFEFLVGADWRIDL*
Ga0115026_115256781	3300009111	Wetland	MRQLRWSRNETGTLNGKVGHLTLFTIAYYPERGHFVAPKLPGLNKTIPVSSTEEGQRKAEALYQWYFDFLRGAARN*
Ga0105091_104479571	3300009146	Freshwater Sediment	ASGFFPLGLNAAQWGVMRQLKWSRNQAGTLNGKVEHVTLFTIAYYPERGYFVAPKLPGLNKTIPVSSEDEGKRKVEALYQKYFDFLNGAEWSLGME*
Ga0105094_107605471	3300009153	Freshwater Sediment	MRQLQWSKNSTGTLNGKVGHVTLFTVANYPERGHFVAPKLPGLNKTIQVNSEEEGIIKAESLYQRYIYFLEGEKWCFDL*
Ga0105100_105988261	3300009166	Freshwater Sediment	MRQLQWSKNSTGTLNGKVGHVTLFTVANYPERGHFVAPKLPGLNKTIQVNSEEEGIIKAESLYQRYIYFLEGEKWCFDV*
Ga0113563_120964361	3300009167	Freshwater Wetlands	MRQLKWSRNQAGTLNGKVGFITLFTIAYYPERNYFLAPKLPGLNKTITVSSEEEGKNQAEVIYKKYVNYLLGDEW*
Ga0116112_11003081	3300009636	Peatland	ASLVSANGGEDLRRGVMRQLTWSQNKAGTLNGKVGHVNLFTVAYYPERGYFVAPKLPGLNKTIPVNSEEEGKRKAEALYQRYFDFLKGAEW*
Ga0153915_100971943	3300012931	Freshwater Wetlands	MRQLEWSQNKAGTLNGKIGHITLFIVAYYPERGYFVAPKLPGLNKTILVNSEEAGKRKAETLYQRYFDFLNGAEWYREHDYQELRSLRVDS*
Ga0153915_109177331	3300012931	Freshwater Wetlands	MRQLKWSRNTAGTLNGKVGHVTLFVVAYFPERGYFVASKLPGLNNTISVNSEVEGKNKAAAIYQRYFKFLNGEEW*
Ga0153915_111286843	3300012931	Freshwater Wetlands	MRELIWSRNKAGTLNGKVKFITLFTIAYYPERGYFLVPKLPGLNKTIQISCEEEGKREASAIYRRYVNFLLGAEW*
Ga0153915_123050871	3300012931	Freshwater Wetlands	MRELIWSRNQAGTLNGKVGFVTLFTIAYYPERGYFLAPKLPGLNKTIQISCEEEGKREANAIYRKYVNFLLGAEW*
Ga0153916_103488034	3300012964	Freshwater Wetlands	MRELIWSRNKAGTLNGKVGFITLFTIAYYPERSYFLSSKLPGLNKTIQISCEEEGKREANAIYRKYVNFLLGAEW*
Ga0153916_112478643	3300012964	Freshwater Wetlands	MRELKWSLNQAGTLNGKVGHVTLFTIAYYPERGHFVAPKLPGLNKTIPVSSHEEGKMKAEILYQRFFDFL
Ga0153916_125769771	3300012964	Freshwater Wetlands	KAGTLNGKVKFITLFTIAYYPERGYFLVPKLPGLNKTIQISCEEEGKREANAIYRRYVNFFLGEEW*
Ga0163199_10198763	3300013092	Freshwater	MRQLKWSRNTAGTLNGKVGHVTLFVVAYFPERGYFVAPKLPGLNKTILVDSEEEGKKKAEAIYQRYFKFLNGAEW*
Ga0163199_11200102	3300013092	Freshwater	MRQLKWSQNNAGTLNGKVGHVTLFTVAYYPERGYFVAPKLPGLNKTIPVNSEEAGKRKAEELYQKYFDFLKGAEWHREHD*
(restricted) Ga0172375_104722032	3300013137	Freshwater	MRQIKWSRSQTGTLNGKVGHVTLFCVAYYQERGYFVAPKLPGLNKTIPVSSEEEGKRKAEAMYQRYFNFLNGAEW*
(restricted) Ga0172371_100825692	3300013138	Freshwater	MRQLKWSRSQTGTLNGKVGHVTVFCVAYYQERGYFVAPKLPGLNKTIPVSSEEEGKRKAEAMYQRYFNFLNGAEW*
Ga0182010_104025431	3300014490	Fen	MRQLKWSQNQAGTLNGKVGHVTLFTVAYFPERGHFVAPKLPGLNKTIPVSSREEGKIKAEAVYKRYIDFLMGAEWYLDM*
Ga0182021_100557933	3300014502	Fen	MEQGEVMRQLKWSRNEAGTLNGKVGHVTLFTVAYYPERGHFVAAKLPGLNKTIQVNSKAEGKYKAEALYQGYFDFLMGAEWCRDM*
Ga0182021_119423501	3300014502	Fen	GTLNGKAGQITLFAVAYYPERGHFVAPKLPGLNKTIPVRSKQEGKMQSELLYHRYFDFLKGAEW*
Ga0182021_119739582	3300014502	Fen	MRQLKWSQNQAGTLNGKVGHVTLFTIAHYPERGHFVTPKLPGLNKTIPVSCREEGKIKAEAVYQRYIDFLMGAEWYLDM
Ga0182021_130102362	3300014502	Fen	MERQRVSECKRWLKDEVGGMRQLIWTRNNAGTINGKIGHVTLFCISYYPERGYFVVPKLPGLNKTIPVSSEEEGKREAEALYRRYINFLNGAEW*
Ga0187854_100202323	3300017938	Peatland	MRQLTWSQNKAGTLNGKVGHVNLFTVAYYPERGYFVAPKLPGLNKTIPVNSEEEGKRKAEALYQRYFDFLKGAEW
Ga0187771_101611773	3300018088	Tropical Peatland	MRQLIWSQNKAGTLNGKVGHVTLFTVAYYPERGYFVVPKLPGLNKTIQVSSEEAGKRKAESLYQRYFEFLKGAE
Ga0212124_100438125	3300022553	Freshwater	MRQLKWSRNTAGTLNGKVGHVTLFVVAYFPERGYFVAPKLPGLNKTILVDSEEEGKKKAEAIYQRYFKFLNGAEW
Ga0212124_101325762	3300022553	Freshwater	LELNATHWGVMRQINWSLNQAGTLNGKVGHVTLFTVAYYPERGYFVAPKLPGLNKTIPVNSEEAGKMKAEALYQRYFDFLKGAEW
Ga0236338_10348202	3300022593	Freshwater	MRQLKWSRNEAGTLNGKVGHVTLFTVAYYPERGHFVAAKLPGLNKTIPVNSKEEGKYKAEVLYQGYFDFLIGAEWCRDM
Ga0236337_11417901	3300022653	Freshwater	MRQLTWSQDQNGTLNGKAGQITLFAVAYYPERGHFVAPKLPGLNKTIPVSSHEEGIMKAETLYQRYFDFLKGADWYLDIK
Ga0256681_120684231	3300023311	Freshwater	MRQLKWSRNQTGTLNGKVGHVTLFTIAYYPERGHFVAPKLPGLNKTIPVSSHEEGIMKAETLYQRYFDFLKGADWYLDIK
Ga0210014_11968441	3300025016	Aquifer	MRQLTWSCNKTGTLNGKVGFITLFTIAYYPERGYFLVPKLPGLNKTIQVNTEEEGKYQAEVIYKRYINYLLGGEWQ
Ga0210051_13230061	3300025868	Groundwater	MRKLKWSLNQAGTLNGKVGHVTLFTVAYYPERGYFVAPKLPGLNKTIPVNSEEAGKMKAEALYQRYFDFLKGAEW
Ga0209285_101642362	3300027726	Freshwater Sediment	MRQLKWSLNQAGTLNGKVGHVTIFTVAYYPERGYFVAPKLPGLNKTIQVSSYEEGKMKAEALYKRFFDFMNGAEWHVDMY
Ga0209293_106713402	3300027877	Wetland	MRQLKWSQNNIGTLNGKVGHVTLFTIAYYPERGHFVAPKLPGLNKTIPVSSTEEGQRKAEALYQWYFDFLRGAARN
Ga0208980_107102371	3300027887	Wetland	MRQLKWSQNQTGTLNGKVGHVTLFTIAHYPERGYFVTSKLPGLNKTIPVTSEEAGKKKAEALYREFFDFLMGAEWFPEPN
Ga0209254_100664012	3300027897	Freshwater Lake Sediment	MRQLKWSRNEVGTLNGKVGHVTLFSVAYYPERGHFVAPKLPGLNKTIQVSSKEDGKKKAEALYQQYINFIMGAEWC
Ga0209254_101855071	3300027897	Freshwater Lake Sediment	MRELIWSRNKAGTLNGKVGFITIFTIAYYPDRGYFLAPKLPGLDKNIQISCEEEGKNEAKTIYRRYVNFLLGAEW
Ga0209254_108224111	3300027897	Freshwater Lake Sediment	RNQAGTLNGKVGHVTLFTIAYYPERGHFVAPKLPGLNKTIPVISHEEGKMKAETLYQRYFEFLKGADWYLDM
Ga0209254_110646321	3300027897	Freshwater Lake Sediment	MRQLKWSLNQAGTLNGKVGHLTLFTIAYYPERGHFVAPKLPGLNKTIPVISHEEGKMKAEALYQRYFEFLKGADWYLDM
Ga0209048_102183171	3300027902	Freshwater Lake Sediment	MRQLNWSRNQAGTLNGKVGHVTLFTIAYYPERGHFVAPKLPGLNKTIPVSSCEEGKMKAETLYQRYFDFLKGADWYLDI
Ga0315290_100921643	3300031834	Sediment	MRQLIWSANQAGTLNGKVGFLTLFTIAYYPERGYFLAPKLPGLNKTIPISNEKEGKNQAEVIYRRYINYLLGGEW
Ga0315290_110116961	3300031834	Sediment	MRQLKWSQNQAGTLNGKVGHVTIFTIAYYPERGHFVAPKLPGLNKTIPVISPEEGKKKAETIYQRYFEFLVGADWRIDI
Ga0315290_113573631	3300031834	Sediment	GKVGFITLFTIAYYPERGYFLAPKLPGLDKTIQISCEEEGKSEAKTIYRRYINFLLGAEW
Ga0315297_116035371	3300031873	Sediment	MRELIWSRNKAGTLNGKVGFITLFTISYYPERSYFLAPKLPGLDKTIQISCEEEGKSEAKTIYRRYINFLLGAEW
Ga0214473_112369492	3300031949	Soil	MRQLKWSKNTAGTLNGKVGHVTLFTVAYYPERGYFVAPKLPGLNKTILVNSEEAGKRKAEALYQRYINFLNGA
Ga0315278_102209082	3300031997	Sediment	MRQLIWSANQTGTLNGKVGFLTLFTIAYYPERGYFLAPKLPGLNKTIPISNEKEGKNQAEVIYRRYINYLLGGEW
Ga0315278_104038662	3300031997	Sediment	MRELIWSRNKAGTLNGKVGFITLFTIAYYPERGYFLAPKLPGLDKTIPISCEEEGKSEAKTIYRRYINFLLGAEW
Ga0315278_104099481	3300031997	Sediment	MRQLKWSQNNAGTLNGKVGHVTLFTVAYYPERGYFVAPKLPGFNKTIPVNSEEAGKRKAEVIYQRYLDFLNGGEWY
Ga0315278_109064071	3300031997	Sediment	LELNATHWGVMRQINWSLNQAGTLNGKVGHVTLFTVAYYPERGYFVAPKLPGLNKTIPVNSEEAGKMKAEALYQR
Ga0315278_116902932	3300031997	Sediment	MRQLKWSQNNAGTLNGKVGHVTLFTVAYYPERGYFVAPKLPGLNKTIPVNSEETGKRKAEALYQRYFDFLRGLEWYQDHDHREPISLDS
Ga0315295_104794122	3300032156	Sediment	MRQLKWSSNQAGTLNGKVGFLTLFTIAYYPERGYFLAPKLPGLNKTIQISSQEEGKNQAEVIYKRYINYLLGEEW
Ga0315295_111386601	3300032156	Sediment	MRQLTWSRNQAGTLNGKVGHVTLFTIAYYPERGHFVAPKLPGLNKTIPVISPEEGKKKAETIYQRYFEFLKGADWYLDM
Ga0315295_119620791	3300032156	Sediment	MRQLEWSLNQAGTLNGKVGHVTLFTIAYYPERGHFVAPKLPGLNKTIPVTSKEEGRMKAEALYQRYFDFLKGAEWYL
Ga0315295_120079922	3300032156	Sediment	MRQLIWSRNQAGTLNGKVGFLTLFTIAYYPERSYFLVPKLPGLNKTIHISSEEEGKKQAEVIYKRYINYLLGG
Ga0315281_101555611	3300032163	Sediment	MRQLIWSRNKAGTLNGKVGFITLFTIAYYPERSYFLVPKLPGLNKTITVSNEEEGKIQAEVIYKRYVNFLLGGE
Ga0315281_122868771	3300032163	Sediment	MRQLIWSPNKVGTLNGKVGFLTLFTIAYYPERGYFLAPKLPGLNKTIQISSEEEGKNKAEVIYKRYINYLLGGEW
Ga0315283_101896903	3300032164	Sediment	MRQLKWSQNQAGTLNGKVGHVTIFTIAYYPERGHFVAPKLPGLNKTIPVISHEEGKMKAEALYQRYFEFLKGADWYLDM
Ga0315283_111672211	3300032164	Sediment	MRELKWSQDNAGTLNGKVGHVTLFTVAYYPERGYFVAPKLPGLNKTILVNSEEAGKRKAEALYQG
Ga0315283_112469771	3300032164	Sediment	MRQLKWSLNQAGTLNGKVGHLTLFTIAYYPERGHFVAPKLPGLNKTIPVTSKEEGKMKAEALYERYCDFLNGAEWHLDM
Ga0315283_115126061	3300032164	Sediment	MRQLKWSLNQAGTLNGKVGHLTLFTIAYYPERGHFVAPQLPGLNKTIPVISHEEGKKKAETLYQRYFDFLKGAEW
Ga0315268_124305551	3300032173	Sediment	MRQLKWSWNQAGTLNGKVGHVTLFTIAYYPERGHFVAPKLPGLNKTIPVRSEEEGKRKAEVLYQQYFDFLNGKDWYLDMK
Ga0315276_106737572	3300032177	Sediment	LELNATHWGVMRQINWSLNQAGTLNGKVGHVTLFTVAYYPERGYFVAPKLPGLNKTIPVNSEEAGKMKAEALYQRYFDFLKGAEWYLDM
Ga0315276_111302231	3300032177	Sediment	QNKTGTLNGKVGQVTLFTVVYYLERGYFVAPKLPGLNKTIPVKSEEEGKMKAESLYKQYIDFLNGAEWQLDM
Ga0315286_104492911	3300032342	Sediment	MRKLIWSSNHAGTLNGKVGFLTLFTIAYYPERGYFLVPKLPGLNKTIQISSADEGKNQAEVIYKRYINYLLGSEW
Ga0315286_109696772	3300032342	Sediment	MRQLKWSCNQDGTFNGKVGHVTLFTIAYYPERGHFVAPKLPGLNKTIQVNSKEEGKMKAEALYQRYFDFLKGAEWYLDM
Ga0315286_118774811	3300032342	Sediment	MRQLKWSQNNAGTLNGKVGHVTLFTVAYYPERGYFVAPKLPGLNKTIPVNSEEAGKRKAEALYQRYFDFLRGAEWYREHDYPEPTSLRVDS
Ga0315287_114539302	3300032397	Sediment	MRQLIWSRNQAGTLNGKVGFLTLFTIAYYPERSYFLVPKLPGLNKTIHISSEEEGKKQAELIYKRYINYLLGGEWQ
Ga0315287_116709651	3300032397	Sediment	MRQLIWSPNQAGTLNGKVGFLTLFTIAYYQERGYFLAPKLPGLNKTIQVSSEEEGKNQAEVI
Ga0315275_115094501	3300032401	Sediment	MRQLIWSRNQAGTLNGKVGFLTLFTIAYYPERSYFLVPKLPGLNKTIHISSEEEGKKQAEVIYKRYINYLLGGEWQ
Ga0315275_127052671	3300032401	Sediment	SNQSGTLNGKVGFLTLFTIAYYPERGYFLVPKLPGLNKTIQISSEEKGKNQAEIIYKRYINYLLGGEW
Ga0315273_103115061	3300032516	Sediment	MRQLKWSPNQAGTLNGKVGFLTLFTIAYYPERGYFLAPKLPGLNKTMQISSDEEGKNQAEVIYKRYINYLLGEEW
Ga0316624_105740661	3300033486	Soil	MRQLKWSQTQTGTLNGKVGHVTLFTIAYYQERGYFLAPKLPGLNKTVQVNSEEAGKRKAAVLYQRYY
Ga0316624_108506601	3300033486	Soil	MRQLKWSKNSTGTLNGKVGHVTLFTVANYAERGHFVAPKLPGLNKTIQVNSEEEGIIKAESLYQRYIYFLEGEKWCLDME
Ga0316624_112351341	3300033486	Soil	MRQLKWSKNEAGTLNGKIGHVTLFTVAYYPERGHFVAPKLPGLNKTVPVKSDEEGIMKAEELYQRYFDFLNGAEWQLER
Ga0316628_1022988631	3300033513	Soil	MRQLIWSRNQTGTLNGKVGFITLFTVAYYPERGYFLAPKLPGLNKTIPVSGEEEGKIQAEAIYKRYVNFLLGDAW
Ga0316616_1036206821	3300033521	Soil	GKVLRLGRRVMRQLKWSQNNIGTLNGKVGHVTLFTIAFYPERGHFVAPKLPGLNKTVPVKSDEEGIMKAEELYQRYFDFLNGAEWQLER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters