Metagenome / Metatranscriptome Family F092278

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Overview

Basic Information
Family ID	F092278
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	52 residues
Representative Sequence	MILEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLYIFLPAMR
Number of Associated Samples	76
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.03 %
% of genes near scaffold ends (potentially truncated)	28.04 %
% of genes from short scaffolds (< 2000 bps)	66.36 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.140 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.215 % of family members)
Environment Ontology (ENVO)	Unclassified (46.729 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.271 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13884	Peptidase_S74	5.61
PF11752	DUF3309	5.61
PF00589	Phage_integrase	4.67
PF13385	Laminin_G_3	2.80
PF13629	T2SS-T3SS_pil_N	2.80
PF03837	RecT	1.87
PF12708	Pectate_lyase_3	1.87
PF01844	HNH	1.87
PF04466	Terminase_3	0.93
PF08797	HIRAN	0.93
PF10686	YAcAr	0.93
PF09588	YqaJ	0.93
PF01391	Collagen	0.93
PF08241	Methyltransf_11	0.93
PF11863	DUF3383	0.93
PF13229	Beta_helix	0.93
PF09356	Phage_BR0599	0.93
PF07589	PEP-CTERM	0.93
PF01381	HTH_3	0.93
PF03354	TerL_ATPase	0.93
PF02498	Bro-N	0.93
PF06048	DUF927	0.93
PF11154	DUF2934	0.93
PF00135	COesterase	0.93
PF09950	DUF2184	0.93
PF13392	HNH_3	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	1.87
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	0.93
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.93
COG3617	Prophage antirepressor	Mobilome: prophages, transposons [X]	0.93
COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	Mobilome: prophages, transposons [X]	0.93
COG5519	Predicted ATPase domain of Cch-like helicases, DUF927 family	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
All Organisms	root	All Organisms	44.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
cellular organisms	root	All Organisms → cellular organisms	42.06 %
Viruses	superkingdom	All Organisms → Viruses	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.06 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.74 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.80 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.15 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.80 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.87 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.67 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.87 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	1.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.87 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.93 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.87 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	1.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.87 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.87 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.93 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %
Brucellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae	0.93 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.93 %
Aurantimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae	0.93 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Methylomagnum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum	1.87 %
Burkholderiales bacterium 21-58-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	1.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.93 %
Brucella/Ochrobactrum group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group	0.93 %
Rhodospirillales bacterium 39-66-50	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 39-66-50	0.93 %
Aureimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas	0.93 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.93 %
Ruegeria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1.87 %
Burkholderiales bacterium 21-58-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	1.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.87 %
Brucella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella	0.93 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.93 %
Edaphobacter acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	0.93 %
Aureimonas altamirensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas → Aureimonas altamirensis	0.93 %
Bradyrhizobium pachyrhizi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	0.93 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.93 %
Rhodospirillales bacterium 39-66-50	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 39-66-50	0.93 %
Ruegeria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1.87 %
Burkholderiales bacterium 21-58-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	1.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.87 %
unclassified Brucella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → unclassified Brucella	0.93 %
Bradyrhizobium sp. Cp5.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Cp5.3	0.93 %
Edaphobacter acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	0.93 %
Aureimonas altamirensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas → Aureimonas altamirensis	0.93 %
Bradyrhizobium pachyrhizi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	0.93 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.93 %
Rhodospirillales bacterium 39-66-50	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 39-66-50	0.93 %
Ruegeria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1.87 %
Burkholderiales bacterium 21-58-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	1.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.87 %
Brucella sp. 21LCYQ03	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → unclassified Brucella → Brucella sp. 21LCYQ03	0.93 %
Bradyrhizobium sp. Cp5.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Cp5.3	0.93 %
Edaphobacter acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	0.93 %
Aureimonas altamirensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas → Aureimonas altamirensis	0.93 %
Bradyrhizobium pachyrhizi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	0.93 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.93 %
Rhodospirillales bacterium 39-66-50	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 39-66-50	0.93 %
Ruegeria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria	0.93 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886011\|MRS1b_contig_3492424	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1688	Open in IMG/M
3300004114\|Ga0062593_100052446	All Organisms → cellular organisms → Bacteria → Proteobacteria	2555	Open in IMG/M
3300004156\|Ga0062589_100057862	All Organisms → cellular organisms → Bacteria → Proteobacteria	2219	Open in IMG/M
3300004463\|Ga0063356_104666932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria	589	Open in IMG/M
3300004479\|Ga0062595_100074450	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300004479\|Ga0062595_100376870	Not Available	1003	Open in IMG/M
3300004479\|Ga0062595_100716301	Not Available	807	Open in IMG/M
3300005163\|Ga0066823_10059980	Not Available	708	Open in IMG/M
3300005163\|Ga0066823_10074352	Not Available	657	Open in IMG/M
3300005288\|Ga0065714_10066601	All Organisms → cellular organisms → Bacteria	6576	Open in IMG/M
3300005295\|Ga0065707_10305613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Cp5.3	995	Open in IMG/M
3300005328\|Ga0070676_10005786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → unclassified Brucella → Brucella sp. 21LCYQ03	6591	Open in IMG/M
3300005330\|Ga0070690_100020256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4050	Open in IMG/M
3300005330\|Ga0070690_100023335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	3794	Open in IMG/M
3300005330\|Ga0070690_100439169	Not Available	965	Open in IMG/M
3300005330\|Ga0070690_100549809	Not Available	870	Open in IMG/M
3300005330\|Ga0070690_101626354	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005335\|Ga0070666_10319450	Not Available	1107	Open in IMG/M
3300005353\|Ga0070669_100000321	All Organisms → cellular organisms → Bacteria	37535	Open in IMG/M
3300005367\|Ga0070667_100838573	Not Available	854	Open in IMG/M
3300005367\|Ga0070667_102239750	Not Available	515	Open in IMG/M
3300005441\|Ga0070700_100013152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4643	Open in IMG/M
3300005456\|Ga0070678_101565516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aureimonas → Aureimonas altamirensis	618	Open in IMG/M
3300005466\|Ga0070685_10336175	Not Available	1028	Open in IMG/M
3300005526\|Ga0073909_10000085	All Organisms → cellular organisms → Bacteria	34878	Open in IMG/M
3300005526\|Ga0073909_10565109	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005841\|Ga0068863_100000378	All Organisms → cellular organisms → Bacteria	45306	Open in IMG/M
3300005844\|Ga0068862_102344291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	545	Open in IMG/M
3300006237\|Ga0097621_100000065	Not Available	54854	Open in IMG/M
3300006237\|Ga0097621_101997722	Not Available	554	Open in IMG/M
3300006358\|Ga0068871_101197273	Not Available	712	Open in IMG/M
3300006606\|Ga0074062_11417781	Not Available	1015	Open in IMG/M
3300006606\|Ga0074062_12723889	Not Available	912	Open in IMG/M
3300006881\|Ga0068865_100651083	Not Available	895	Open in IMG/M
3300009098\|Ga0105245_12200667	Not Available	605	Open in IMG/M
3300009148\|Ga0105243_10483530	Not Available	1169	Open in IMG/M
3300009176\|Ga0105242_10000635	All Organisms → cellular organisms → Bacteria → Proteobacteria	27582	Open in IMG/M
3300009176\|Ga0105242_12018818	Not Available	619	Open in IMG/M
3300009177\|Ga0105248_10557615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1293	Open in IMG/M
3300009553\|Ga0105249_10156818	Not Available	2196	Open in IMG/M
3300009553\|Ga0105249_11029073	Not Available	893	Open in IMG/M
3300009678\|Ga0105252_10002903	All Organisms → cellular organisms → Bacteria → Proteobacteria	6822	Open in IMG/M
3300010397\|Ga0134124_10822432	Not Available	930	Open in IMG/M
3300010397\|Ga0134124_10833076	Not Available	924	Open in IMG/M
3300010400\|Ga0134122_11384968	Not Available	716	Open in IMG/M
3300010401\|Ga0134121_12270503	Not Available	581	Open in IMG/M
3300011400\|Ga0137312_1052130	Not Available	678	Open in IMG/M
3300011421\|Ga0137462_1064582	Not Available	820	Open in IMG/M
3300011422\|Ga0137425_1018414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 39-66-50	1453	Open in IMG/M
3300011422\|Ga0137425_1066483	Not Available	838	Open in IMG/M
3300011422\|Ga0137425_1089600	Not Available	737	Open in IMG/M
3300011443\|Ga0137457_1000485	All Organisms → cellular organisms → Bacteria → Proteobacteria	10485	Open in IMG/M
3300012896\|Ga0157303_10106093	Not Available	689	Open in IMG/M
3300013306\|Ga0163162_10573678	Not Available	1255	Open in IMG/M
3300013308\|Ga0157375_11866656	Not Available	713	Open in IMG/M
3300015371\|Ga0132258_10162281	All Organisms → cellular organisms → Bacteria → Proteobacteria	5375	Open in IMG/M
3300015371\|Ga0132258_11187980	Not Available	1928	Open in IMG/M
3300015372\|Ga0132256_101509629	Not Available	783	Open in IMG/M
3300015373\|Ga0132257_101846022	Not Available	777	Open in IMG/M
3300018067\|Ga0184611_1000047	All Organisms → cellular organisms → Bacteria → Proteobacteria	21249	Open in IMG/M
3300018067\|Ga0184611_1103200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	992	Open in IMG/M
3300018072\|Ga0184635_10097041	Not Available	1164	Open in IMG/M
3300018073\|Ga0184624_10058567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1578	Open in IMG/M
3300018083\|Ga0184628_10689313	Not Available	510	Open in IMG/M
3300018466\|Ga0190268_12036673	Not Available	529	Open in IMG/M
3300018476\|Ga0190274_10317082	Not Available	1462	Open in IMG/M
3300018481\|Ga0190271_12706590	Not Available	595	Open in IMG/M
3300018481\|Ga0190271_13820859	Not Available	504	Open in IMG/M
3300019361\|Ga0173482_10000012	All Organisms → cellular organisms → Bacteria → Proteobacteria	31948	Open in IMG/M
3300021475\|Ga0210392_10000052	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	111039	Open in IMG/M
3300022880\|Ga0247792_1151401	Not Available	503	Open in IMG/M
3300023263\|Ga0247800_1061001	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300024187\|Ga0247672_1000368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	7542	Open in IMG/M
3300024187\|Ga0247672_1001816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	3447	Open in IMG/M
3300024187\|Ga0247672_1045154	Not Available	726	Open in IMG/M
3300024232\|Ga0247664_1059297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	883	Open in IMG/M
3300024275\|Ga0247674_1049128	Not Available	510	Open in IMG/M
3300024317\|Ga0247660_1000016	All Organisms → cellular organisms → Bacteria	26359	Open in IMG/M
3300024317\|Ga0247660_1002526	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2561	Open in IMG/M
3300024317\|Ga0247660_1003605	Not Available	2223	Open in IMG/M
3300025315\|Ga0207697_10153858	Not Available	1001	Open in IMG/M
3300025893\|Ga0207682_10041785	Not Available	1872	Open in IMG/M
3300025899\|Ga0207642_10296495	Not Available	936	Open in IMG/M
3300025903\|Ga0207680_10000101	All Organisms → cellular organisms → Bacteria → Proteobacteria	39310	Open in IMG/M
3300025903\|Ga0207680_10000136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34838	Open in IMG/M
3300025903\|Ga0207680_10107731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	1802	Open in IMG/M
3300025918\|Ga0207662_10854177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300025923\|Ga0207681_10000984	All Organisms → cellular organisms → Bacteria → Proteobacteria	18638	Open in IMG/M
3300025923\|Ga0207681_10163095	Not Available	1682	Open in IMG/M
3300025926\|Ga0207659_11181034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300025930\|Ga0207701_10296075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	1406	Open in IMG/M
3300025931\|Ga0207644_10000975	All Organisms → cellular organisms → Bacteria → Proteobacteria	18281	Open in IMG/M
3300025931\|Ga0207644_10095607	Not Available	2222	Open in IMG/M
3300025934\|Ga0207686_10051773	All Organisms → cellular organisms → Bacteria	2559	Open in IMG/M
3300025934\|Ga0207686_10535052	Not Available	914	Open in IMG/M
3300025941\|Ga0207711_10014376	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6573	Open in IMG/M
3300025941\|Ga0207711_10391798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1290	Open in IMG/M
3300027288\|Ga0208525_1040579	Not Available	579	Open in IMG/M
3300027573\|Ga0208454_1002471	Not Available	6282	Open in IMG/M
3300027645\|Ga0209117_1074727	Not Available	958	Open in IMG/M
3300027821\|Ga0209811_10004147	Not Available	4690	Open in IMG/M
3300027821\|Ga0209811_10012927	All Organisms → cellular organisms → Bacteria	2685	Open in IMG/M
3300027821\|Ga0209811_10130551	Not Available	921	Open in IMG/M
3300028072\|Ga0247675_1015469	Not Available	1085	Open in IMG/M
3300028145\|Ga0247663_1018899	Not Available	1026	Open in IMG/M
3300028293\|Ga0247662_1001646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2960	Open in IMG/M
3300028802\|Ga0307503_10001292	Not Available	5583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.81%
Host-Associated	Host-Associated	40.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.66%
Plants	Host-Associated → Plants	40.19%
Aquatic	Environmental → Aquatic	12.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.23%
Sediment	Environmental → Aquatic → Sediment	12.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.15%
Roots	Host-Associated → Plants → Roots	2.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.21%
Loam	Environmental → Terrestrial → Soil → Loam	8.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.80%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.28%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.54%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	6.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886011	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MRS1b_0709.00001600	2162886011	Miscanthus Rhizosphere	MIIEILFVVVMFLWLITILPLPQMQPFSSSNVFFAFVAVLLLGLYLFLPGLRG
Ga0062593_1000524465	3300004114	Soil	MIIEILFVVTLFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLYIFLPAMR*
Ga0062589_1000578623	3300004156	Soil	MILEILFVVVMFLWLLSILPFPPMAPFSASNVYFAFVAVLLLGLYIFLPAMR*
Ga0063356_1046669321	3300004463	Arabidopsis Thaliana Rhizosphere	AGGILGGEARRERQGMILEILFTVTMFMWLLTILPLPAVQPFASSNVFFAFVAVLLLGLYIFLPAMR*
Ga0062595_1000744502	3300004479	Soil	MILEILFVVTMFLWLLTLLPIPPLAPYAGSYGYFAFVAVLLLGLFIFLPGMR*
Ga0062595_1003768702	3300004479	Soil	MILEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLFVFLPAMR*
Ga0062595_1007163013	3300004479	Soil	VILEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLYIFLPGMR*
Ga0066823_100599803	3300005163	Soil	MIIEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLFIFLPGMR*
Ga0066823_100743521	3300005163	Soil	MIIEILFVVVMFLWLLTILPLPPMAPFSQANVFFAFVAVLLLGLFLFL
Ga0065714_1006660110	3300005288	Miscanthus Rhizosphere	MIIEILFVVVMFLWLITILPLPQMQPFSSSNVFFAFVAVLLLGLYLFLPGLRG*
Ga0065707_103056134	3300005295	Switchgrass Rhizosphere	MIIEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLYIFLPAMR*
Ga0070676_100057868	3300005328	Miscanthus Rhizosphere	MIIEILFVVTLFLWLLTILPIPPMAPFSASNVYFAFIAVLLLGLYIFLPTMR*
Ga0070690_1000202563	3300005330	Switchgrass Rhizosphere	MIIEILFVVVLFLWLLTILPLPPMAPFQSSNVFFAFVAVLLLGLYIFLPAMR*
Ga0070690_1000233353	3300005330	Switchgrass Rhizosphere	MILEILFVVTMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLFIFLPGMR*
Ga0070690_1004391691	3300005330	Switchgrass Rhizosphere	MILEILFVVTLFLWLLTILPIPPMAPFSASNVYFAFIAVLLLGLYIFLPTMR*
Ga0070690_1005498092	3300005330	Switchgrass Rhizosphere	MILEILFIMVMFLWFITILPLPPLAPYHTANVFFAFTAVLLLGLYIFLPAMRG*
Ga0070690_1016263541	3300005330	Switchgrass Rhizosphere	MIIEILFVVVMFLWLITILPFPAVQPFATSNVFFAFVAVLLLGLYLFLPALRG*
Ga0070666_103194502	3300005335	Switchgrass Rhizosphere	VSAMILEILFVVTMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLFIFLPGMR*
Ga0070669_10000032128	3300005353	Switchgrass Rhizosphere	MIIEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLFIFLPAMR*
Ga0070667_1008385732	3300005367	Switchgrass Rhizosphere	MILEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAVLLL
Ga0070667_1022397501	3300005367	Switchgrass Rhizosphere	AMILEILFVVTMFLWLLTLLPIPPLAPYAGSYGYFAFVAVLLLGLFIFLPGMR*
Ga0070700_1000131523	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MILEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLYIFLPAMR*
Ga0070678_1015655161	3300005456	Miscanthus Rhizosphere	MIIEILFVVVLFLWLLTILPLPPMAPFQSSNVFFAFVAVLLLGLYLFLPALRG*
Ga0070685_103361751	3300005466	Switchgrass Rhizosphere	MILEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLYIFLPAIR*
Ga0073909_1000008537	3300005526	Surface Soil	MVLEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLFIFLPGIR*
Ga0073909_105651091	3300005526	Surface Soil	GPTRRNEPMIIEILFVVVMFLWLITILPFPAVQPFATSNVFFAFVAVLLLGLYLFLPALRG*
Ga0068863_10000037833	3300005841	Switchgrass Rhizosphere	MIIEILFIMVMFLWLLTILPFPPLAPYSGSNVFFAFVAVLLLGLYLFLPALRG*
Ga0068862_1023442912	3300005844	Switchgrass Rhizosphere	MILEILFVVVMFLWLLSILPFPPMAPFSASNIYFAFTAVLLLGLYIFLPALR*
Ga0097621_10000006554	3300006237	Miscanthus Rhizosphere	MILEILFTVVMFMWLLTILPLPPMAPFASSNVFFAFVAVLLLGLYIFLPNMR*
Ga0097621_1019977223	3300006237	Miscanthus Rhizosphere	MIIEILFVVTMFLWLITILPFPAVTPFASSNVFFAFVAVLLLGLYLFLPGLRG*
Ga0068871_1011972731	3300006358	Miscanthus Rhizosphere	GPDPFLLREGAAMILEILFVVTMFLWLLTLLPIPPLAPYAGSYGYFAFVAVLLLGLFIFLPGMR*
Ga0074062_114177812	3300006606	Soil	MILEILFVVVMFLWLITILPFPAMTPFAASNVFFAFTAVLLLGLFIFLPGLR*
Ga0074062_127238892	3300006606	Soil	MIIEILFVVVMFLWLLTILPLPPMAPFAPSNVFFAFVAVLLLGLFIFLPGIR*
Ga0068865_1006510833	3300006881	Miscanthus Rhizosphere	MILENLFVVVMFLWLLSILPFPPMAPFSASNIYFAFTAVLLLGLYIFLPALR*
Ga0105245_122006673	3300009098	Miscanthus Rhizosphere	FVVVMFLWLLTILPLPPMAPFQSSNVFFAFVAVLLLGLYIFLPAMR*
Ga0105243_104835302	3300009148	Miscanthus Rhizosphere	STLPVVLITGGSNMILEILFIMVMFLWFITILPLPPLAPYHTANVFFAFTAVLLLGLYIFLPAMRG*
Ga0105242_1000063519	3300009176	Miscanthus Rhizosphere	MANFTEERTMIIEILFVVVLFLWLLTILPLPPMAPFQSSNVFFAFVAVLLLGLYIFLPAMR*
Ga0105242_120188181	3300009176	Miscanthus Rhizosphere	MFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLYIFLPAMR*
Ga0105248_105576152	3300009177	Switchgrass Rhizosphere	MILEILFVVVMFLWLLTILPLPPMAPFSTSNVYFAFVAVLLLGLYIFLPAMR*
Ga0105249_101568183	3300009553	Switchgrass Rhizosphere	MILEILFVVVMFLWLLTILPLPPMAPFQSSNVFFAFVAVLLLGLYIFLPAMR*
Ga0105249_110290734	3300009553	Switchgrass Rhizosphere	MIIEILFVVVMFLWLITILPLPQMQPFSSSNVFFAFVAVLLLGLY
Ga0105252_100029032	3300009678	Soil	MILTILFVVVMFLWLITILPFPPMQPFASSNVFFAFVAVLLLGLFLFVPGLR*
Ga0134124_108224321	3300010397	Terrestrial Soil	MIIEILFVVVMFLWLITIFPLPQMQPFSSSNVFFAFVAVMLLGLYLFLPGLRG*
Ga0134124_108330763	3300010397	Terrestrial Soil	MILEILFVVVMFLWLITILPLPAMSPFASSNVFFAFTAVLLLGLYLFLPAMR*
Ga0134122_113849682	3300010400	Terrestrial Soil	SRKLIGPLPVVLITGGSNMILEILFIMVMFLWFITILPLPPLAPYHTANVFFAFTAVLLLGLYIFLPAMRG*
Ga0134121_122705031	3300010401	Terrestrial Soil	TGGSNMILEILFIMVMFLWFITILPLPPLAPYHTANVFFAFTAVLLLGLYIFLPAMRG*
Ga0137312_10521302	3300011400	Soil	VILEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAALLLGLYIFLPNLR*
Ga0137462_10645823	3300011421	Soil	MILEILFVVTMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLYVFLPAFR*
Ga0137425_10184143	3300011422	Soil	VADVILEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLYIFLPNLR*
Ga0137425_10664832	3300011422	Soil	MILMILFVVTMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLYVFMPALRG*
Ga0137425_10896002	3300011422	Soil	VILEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLYIFLPNLR*
Ga0137457_10004851	3300011443	Soil	FVVVMFLWLLTILPFPPMQPFASSNVFFAFVAVLLLGLFVFMPGLRG*
Ga0157303_101060931	3300012896	Soil	EAAVILEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLYIFLPGMR*
Ga0163162_105736781	3300013306	Switchgrass Rhizosphere	EILFVVVMFLWLLSILPFPPMAPFSASNIYFAFTAVLLLGLYIFLPALR*
Ga0157375_118666562	3300013308	Miscanthus Rhizosphere	FVVVMFLWLLSILPFPPMAPFSASNVYFAFVAVLLLGLYIFLPAMR*
Ga0132258_101622812	3300015371	Arabidopsis Rhizosphere	VILEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLYIFLPAMR*
Ga0132258_111879801	3300015371	Arabidopsis Rhizosphere	GMILEILFVVVMFLWLLSILPFPPMAPFSASNVYFAFVAVLLLGLYIFLPAMR*
Ga0132256_1015096292	3300015372	Arabidopsis Rhizosphere	VILEILFVVVMFLWLLTILPLPPMAPFASSNVFFALVAVLLLGLFIFLPAMR*
Ga0132257_1018460221	3300015373	Arabidopsis Rhizosphere	AVILEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLYIFLPAMR*
Ga0184611_100004723	3300018067	Groundwater Sediment	MILEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLYIFLPTLR
Ga0184611_11032004	3300018067	Groundwater Sediment	LEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLYIFLPGMR
Ga0184635_100970414	3300018072	Groundwater Sediment	MILEILFVVVMFLWLLTILPLPPVAPFAGFNTFFAFVSVLLLGQREDC
Ga0184624_100585674	3300018073	Groundwater Sediment	MILEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLYIFLPGMR
Ga0184628_106893131	3300018083	Groundwater Sediment	GFDVHDGQHTECVVILEILFCVTMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLYIFLPGMR
Ga0190268_120366731	3300018466	Soil	ILEILFVVVMFLWLLSILPFPPMAPFSASNVYFAFVAVLLLGLYIFLPTLR
Ga0190274_103170822	3300018476	Soil	MPLTKLSLFVVTMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLYVFMPALRG
Ga0190271_127065902	3300018481	Soil	MILMILYVVVMFLWLITILPFPPMAPFAPSNVFFAFTAVLLLGLYIFLPALR
Ga0190271_138208592	3300018481	Soil	MILEILFVVVMFLWLLTILPFPAMAPFSTSNVFFAFTAVLLLGLYVFLPAVR
Ga0173482_100000125	3300019361	Soil	VILEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLYIFLPGMR
Ga0210392_10000052121	3300021475	Soil	MIIEILFVVVMFMWLITILPFPQIQPFAATNVFFAFVAVLLLGIFIFAPGIR
Ga0247792_11514011	3300022880	Soil	EAAVILEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLYIFLPGMR
Ga0247800_10610012	3300023263	Soil	MILEILFVVVMFLWLLSILPFPPMAPFSASNVYFAFVAVLLLGLYIFLPAMR
Ga0247672_10003687	3300024187	Soil	MILEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLYIFLPAMR
Ga0247672_10018165	3300024187	Soil	MIIEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLYIFLPAMR
Ga0247672_10451542	3300024187	Soil	MILEILFTVVMFLWLLTILPLPPMAQFASSNVFFAFVAVLLLGLYIFLPAMR
Ga0247664_10592973	3300024232	Soil	MIIEILFVVVMFLWLITILPLPQMQPFSSSNVFFAFVAVLLLGLYLFLPG
Ga0247674_10491283	3300024275	Soil	MIIEILFVVVMFLWLITILPLPQMQPFSSSNVFFAFVA
Ga0247660_100001630	3300024317	Soil	MVLEILFCVVMFMWLLTILPLPPMAPFASSNVFFAFVAVLLLGLYMFLPGMR
Ga0247660_10025265	3300024317	Soil	MIIEILFVVVMFLWLITILPLPQMQPFSSSNVFFAF
Ga0247660_10036051	3300024317	Soil	VMFLWLITILPLPQMQPFSSSNVFFAFVAVLLLGLYLFLPGLRG
Ga0207697_101538583	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MIIEILFVVTLFLWLLTILPIPPMAPFSASNVYFAFIAVLLLGLYIFLPTMR
Ga0207682_100417852	3300025893	Miscanthus Rhizosphere	MILEILFIMVMFLWFITILPLPPLAPYHTANVFFAFTAVLLLGLYIFLPAMRG
Ga0207642_102964952	3300025899	Miscanthus Rhizosphere	MILEILFVVTLFLWLLTILPIPPMAPFSASNVYFAFIAVLLLGLYIFLPTMR
Ga0207680_1000010123	3300025903	Switchgrass Rhizosphere	MILEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLYIFLPAMR
Ga0207680_1000013628	3300025903	Switchgrass Rhizosphere	MIIEILFVVVLFLWLLTILPLPPMAPFQSSNVFFAFVAVLLLGLYIFLPAMR
Ga0207680_101077313	3300025903	Switchgrass Rhizosphere	MILEILFVVTMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLFIFLPGMR
Ga0207662_108541772	3300025918	Switchgrass Rhizosphere	MIIEILFVVVLFLWLLTILPLPPMAPFQSSNVFFAFVAVLLLGLYLFLPALRG
Ga0207681_1000098419	3300025923	Switchgrass Rhizosphere	MIIEILFVVVMFLWLLTILPLPPMAPFSASNVYFAFVAVLLLGLFIFLPAMR
Ga0207681_101630951	3300025923	Switchgrass Rhizosphere	MILEILFVVTLFLWLLTILPIPPMAPFSASNVYFAFI
Ga0207659_111810343	3300025926	Miscanthus Rhizosphere	AGEGHMILEILFVVVMFLWLLTILPLPPIAPFSASNVYFAFVAVLLLGLYIFLPAMR
Ga0207701_102960752	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MILEILFVVVMFLWLLTILPLPPMAPFQSSNVFFAFVAVLLLGLYIFLPAMR
Ga0207644_1000097513	3300025931	Switchgrass Rhizosphere	MILEILFIMVMFLWLITILPLPQIQPFSSSSVFFAFVSVLLLGLYLFLPALRG
Ga0207644_100956075	3300025931	Switchgrass Rhizosphere	VVMFLWLITILPFPAVQPFATSNVFFAFVAVLLLGLYLFLPALRG
Ga0207686_100517737	3300025934	Miscanthus Rhizosphere	MILEILFVVTMFLWLLTLLPIPPLAPYAGSYGYFAFVAVLLLGLFIFLPGMR
Ga0207686_105350523	3300025934	Miscanthus Rhizosphere	MILEILFVVTLFLWLLTILPIPPMAPFSASNVYFAFIAVLLLGLYIFLPSMR
Ga0207711_100143764	3300025941	Switchgrass Rhizosphere	MIIEILFVVTMFLWLITILPFPAVTPFASSNVFFAFVAVLLLGLYLFLPGLRG
Ga0207711_103917982	3300025941	Switchgrass Rhizosphere	MILEILFVVVMFLWLLTILPLPPMAPFSTSNVYFAFVAVLLLGLYIFLPAMR
Ga0208525_10405792	3300027288	Soil	MIIEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLFIFLPGMR
Ga0208454_10024717	3300027573	Soil	MILTILFVVVMFLWLITILPFPPMQPFASSNVFFAFVAVLLLGLFLFVPGLR
Ga0209117_10747272	3300027645	Forest Soil	MILEVLFVVTMFLWGVLSLPHPSMAPFNPAAPYFAFIAVLLLGLAFYVPGLRG
Ga0209811_100041472	3300027821	Surface Soil	MVLEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLFIFLPGIR
Ga0209811_100129272	3300027821	Surface Soil	MIIEILFVVVMFLWLLTILPLPPMAPFAPSNVFFAFVAVLLLGLFIFLPGMR
Ga0209811_101305512	3300027821	Surface Soil	MIIEILWVVVMFLWLLTILPFPQLAPYSSSNVFFAFVSVLLLGLFVFLPGIRG
Ga0247675_10154693	3300028072	Soil	WLITILPLPQMQPFSSSNVFFAFVAVLLLGLYLFLPGLRG
Ga0247663_10188993	3300028145	Soil	MIIEILFVVVMFLWLLTILPLPPMAPFSASNIYFAFVAVLLLGLYIFLPAMR
Ga0247662_10016463	3300028293	Soil	MIVEILFVVVMFLWLLTILPLPPMAPFASSNVFFAFVAVLLLGLFIFLPAIR
Ga0307503_100012929	3300028802	Soil	MIIEILFVVVMFLWLLTILPFPPLQPFSSSNVFFAFVAVLLLGLFVFMPGLRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092278

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences