NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F092265

Metagenome Family F092265

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F092265
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 135 residues
Representative Sequence MRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTYRPSTKIYTKIAAAQTPEGMAANLAVL
Number of Associated Samples 89
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.084 % of family members)
Environment Ontology (ENVO) Unclassified
(57.009 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(67.290 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.
1C687J26631_102693891
2Ga0062589_1006821762
3Ga0062589_1020010751
4Ga0063356_1042608742
5Ga0063356_1055035531
6Ga0065715_110754341
7Ga0070690_1002176912
8Ga0070670_1009869582
9Ga0070670_1013588871
10Ga0068869_1018439732
11Ga0068869_1019892141
12Ga0070671_1002394732
13Ga0070673_1005602971
14Ga0070673_1013247541
15Ga0070688_1009207321
16Ga0070701_103187931
17Ga0070663_1020642071
18Ga0070678_1019497491
19Ga0068867_1007194311
20Ga0068867_1011670471
21Ga0070707_1019202351
22Ga0070672_1006088432
23Ga0070672_1009132721
24Ga0070672_1010280462
25Ga0070664_1004129642
26Ga0068857_1009246751
27Ga0068857_1021609931
28Ga0068859_1004113072
29Ga0068864_1012765882
30Ga0068870_109087201
31Ga0068870_112632941
32Ga0068863_1017395041
33Ga0068860_1022758061
34Ga0097621_1005373582
35Ga0097621_1011124951
36Ga0097621_1020635641
37Ga0068871_1008836881
38Ga0068871_1010369941
39Ga0075421_1026820341
40Ga0079216_108352402
41Ga0105245_111694521
42Ga0111538_111320161
43Ga0111538_123693981
44Ga0105242_126444441
45Ga0105248_100147411
46Ga0105347_10259051
47Ga0126372_129165511
48Ga0134127_129773791
49Ga0134122_127229771
50Ga0134121_122406861
51Ga0134121_126794631
52Ga0134123_132351601
53Ga0137326_10424751
54Ga0137321_10796282
55Ga0157281_10946961
56Ga0157303_101259791
57Ga0157299_102821361
58Ga0157289_102890401
59Ga0157283_100937332
60Ga0164308_116477942
61Ga0157378_108992861
62Ga0163162_111535022
63Ga0157375_108546572
64Ga0075320_11261461
65Ga0075302_10834852
66Ga0157380_103627222
67Ga0157377_104860391
68Ga0157379_120792731
69Ga0157376_110849351
70Ga0173478_101865891
71Ga0132256_1034633032
72Ga0182040_106405411
73Ga0163161_102184901
74Ga0190266_109719521
75Ga0184629_105597101
76Ga0190274_106672172
77Ga0190271_119495232
78Ga0173482_104364632
79Ga0173479_106377891
80Ga0187893_109526471
81Ga0222622_103846702
82Ga0207656_104236521
83Ga0207650_118781371
84Ga0207659_110854532
85Ga0207701_104180151
86Ga0207644_106790731
87Ga0207670_106923122
88Ga0207669_111586361
89Ga0207691_101899062
90Ga0207691_114575901
91Ga0207679_104223871
92Ga0207651_112271092
93Ga0207651_112426851
94Ga0207703_109469531
95Ga0207703_115369951
96Ga0207674_119076741
97Ga0207683_107644142
98Ga0209974_102672191
99Ga0209382_116686151
100Ga0268265_124923471
101Ga0307497_105817311
102Ga0170824_1198090291
103Ga0310907_106311062
104Ga0310892_107250282
105Ga0310885_102367772
106Ga0310884_109925441
107Ga0315912_101012553
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 8.59%    β-sheet: 30.06%    Coil/Unstructured: 61.35%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

20406080100120MRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTYRPSTKIYTKIAAAQTPEGMAANLAVLSequenceα-helicesβ-strandsCoilSS Conf. scoreSignal Peptide
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains




 ⦗Top⦘

Phylogeny

NCBI Taxonomy


Visualization
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Groundwater Sediment
Groundwater Sediment
Soil
Terrestrial Soil
Tropical Forest Soil
Soil
Agricultural Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Forest Soil
Soil
Soil
Natural And Restored Wetlands
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Soil
Microbial Mat On Rocks
Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Arabidopsis Rhizosphere
2.8%13.1%4.7%3.7%2.8%3.7%6.5%2.8%5.6%4.7%3.7%3.7%8.4%6.5%2.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C687J26631_1026938913300002124SoilMRRLAIASMFLLTLTLTAQQLPEAATIAKQVQEATKQRKSIQYVRELTGEFTLDGKPVTEVVSSGRRIPVSSAIGKQSVSMENPGKARIDLQLGAGNLMVTDGETSWTYRPSSKLYTKISAARTPAGVAADLAVLDVIGFFADAKSAKTTGEETITVD
Ga0062589_10068217623300004156SoilMRLPVISLVVMFSLAAQDLPDAAALRKQVQDAAKKRQSIQYVSELIGEVTLDGKPVTEVNSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPSTKLYTKITAAQGPDGVAANLAVLDVMGFFED
Ga0062589_10200107513300004156SoilMRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTYRP
Ga0063356_10426087423300004463Arabidopsis Thaliana RhizosphereMRSIAIASILLLTLTLGAQELPDAATITKQVQEAARQRKSIEYVKEITGEVTWDGKPLTEIQASGRRVPVQSSIGKQTVALQNPGKARIDLQLG
Ga0063356_10550355313300004463Arabidopsis Thaliana RhizosphereMRSLATVLALLLTLSIHAQQLPEVATLMKQVQDATKQRKSIEYVREISGEVTLDGKPVTEVNASGRRIPVQTEIGRQTVALENPGKARIDLQLGGGGSLLVSDGDS
Ga0065715_1107543413300005293Miscanthus RhizosphereMRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTYRPSTKIYTKIAAAQTPEGMAANLAVL
Ga0070690_10021769123300005330Switchgrass RhizosphereMRPAVISLVVMFSLAAQELPDAASLRKQVQEAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPSTKLYTKITAAQGPDGVAANLAVLDVMGFFEDAKSAKTVRSETIGIDGQSYDCWVITSNVKIPA
Ga0070670_10098695823300005331Switchgrass RhizosphereMRPAVISLVIMFSLAAQELPDATSLRKQVQDAAKKRQSIQYVSELTGEVTLDGKPVTEVNSLGRRIPVASAVGKQTVAIQNPGKARVELDLGAGNLMVSDGEATWTYRPSTKLYSKITAAQGPDGVAANLAVLDVMGFFEDAKSAKTVRSETIGID
Ga0070670_10135888713300005331Switchgrass RhizosphereMRLAITAFVMLMTLIAQDLPDASTLRKQVQDAAKKRQSIQYVSELTGEVTLDGKPVSEVISGGRRIPVTSAVGKQTVAVQNPGKARVELELGAGNLMVSDGEATWTYRPSTKLYTKIT
Ga0068869_10184397323300005334Miscanthus RhizosphereMRLAIPAFVMLMALIAQDLPDASALRKQVQDAAKKRQSIQYVSELTGEVTLDGKPVSEVISGGRRIPVTSAVGKQTVAVQNPGKARVELELGAGNLMVSDGEATWTYRPSTKLYTKITA
Ga0068869_10198921413300005334Miscanthus RhizosphereMRPAILSIVMMFSLVVQELPDAASLRKQVQDAAKKRQSIQYVVELTGEVTLDGKPVTEVNSLGRRIPVASAVGKQTVAVQNPGKARVELDLGVGSLMVSDGEATWTYRPSTKLYTKISAAQGPDGVAANLAVLDVMGFFEDAKSAKTVRSETITVD
Ga0070671_10023947323300005355Switchgrass RhizosphereMRLITIPVMVLFTLAAQELPDAASLRKQVQDAAKNRKSIQYVSEITGEVTLGGKPVTEVNSSGRKIPVQTAVGKQSVAVQNPGKARVELELGAGNLMVSDGESTWTYRPSTKLYTKITAAQAPDGVAAN
Ga0070673_10056029713300005364Switchgrass RhizosphereMRSVAIASLLMLTLTLGAQDLPDAATINKKVQEAAKQRKSIEYVKEITGEVTLDGKPVTEVSALGRRVPVQSSIGKQTVSLQNPGKARIDLQLGGGSLLVSDGETTVT
Ga0070673_10132475413300005364Switchgrass RhizosphereMRPAVISVVVMLSLAAQELPDAASLRKQVQDAAKKRQSIQYVSELIGEVTMDGKPVTEVLSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGDATWTYRPSTKLYTKITAAQGPDGVAANLAVLDVMGFF
Ga0070688_10092073213300005365Switchgrass RhizosphereMRPAVISLVVMFSLAAQELPDAASLRKQVQEAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPSTKLYTKITAAQGPDGVAANLAVLDVMGFFEDAKS
Ga0070701_1031879313300005438Corn, Switchgrass And Miscanthus RhizosphereMRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTYRPSTKIYTKI
Ga0070663_10206420713300005455Corn RhizosphereMRSVAIASLLMLTLTLGAQDLPDAATINKKVQEAAKQRKSIEYVKEITGEVTLDGKPVTEVSALGRRVPVQSSIGKQTVSLQNPGKARIDLQLGGGSLLVSDGETTVTYRPSTKTYTKIAAAQTQEGIAANLAVLDVLGFFADTRTTKTQRQDS
Ga0070678_10194974913300005456Miscanthus RhizosphereMRSVAIASLLMLTLTLGAQDLPDAATINKKVQEAAKQRKSIEYVKEITGEVTLDGKPVTEVSALGRRVPVQSSIGKQTVSLQNPGKARIDLQLGGGSLLVSDGETTV
Ga0068867_10071943113300005459Miscanthus RhizosphereMRSVAIASMLLLTLTLSAQELPDAATIAKQVQEAAKQRKSIEYVKELTGEVTLNGKPVTEVNASGRRIQVQSSVGKQSVAIQNPGKARIDLQLGGGSLLVSDGELTWTYRPSTKTY
Ga0068867_10116704713300005459Miscanthus RhizosphereMRSVAIASLLLLTLTLGAQDLPDAATITKQVQESAKQRKSIEYVREITGEVTLEGRPVTEVNASGRRIPVQSAIGKQTVAVQNPGKARIDLQLGGGNLLVSDGETTLTYRPSTKTYTKIAAAQTQEGLAANLA
Ga0070707_10192023513300005468Corn, Switchgrass And Miscanthus RhizosphereMRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYIREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTYRPSTKIYT
Ga0070672_10060884323300005543Miscanthus RhizosphereMRSVAIASMLLLTLTLSAQELPDAATIAKQVQEAAKQRKSIEYVKELTGEVTLDGKPVTEVNASGRRIQVQSSVGKQSVAIQNPGKARIDLQLGGGSLLVSDGELTWTYRPSTKTYTRIAAAQTPDGVAANLAVLDVLGF
Ga0070672_10091327213300005543Miscanthus RhizosphereMRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTYRPSTKIYTKIAAAQTPEGMAANLAVLDVLGFFADTKTTKTSRQDSVTIDGTTYDCWVLTSSV
Ga0070672_10102804623300005543Miscanthus RhizosphereMRLAISAFVMLMALIAQDLPDASALRKQVQDAAKKRQSIQYVSELTGEVTLDGKPVSEVISGGRRIPVTSAVGKQTVAVQNPGKARVELELGAGNLMVSDGEATWTYRPSTKLYTKITAAQGPDGVAANLAVLDVM
Ga0070664_10041296423300005564Corn RhizosphereMRSLATVLILLTLTIQGQQLPEAATITKQIQDATKQRKSLEYIREISGEVTLDGKPVTEVNASGRRILVQTEIGKQTVALQNPGKARIDLQLGGGGSLLVSDGDSTWNYRPSTKTYTKIAAAQTPDGVAANLAVLDVLGFFADAKTTKTDREESITV
Ga0068857_10092467513300005577Corn RhizosphereMRSMTIVSLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVS
Ga0068857_10216099313300005577Corn RhizosphereMRSLATVLILLTLTIQGQQLPEAATITKQIQDATKQRKSLEYIREISGEVTLDGKPVTEVNASGRRILVQTEIGKQTVALQNPGKARIDLQLGGGGSLLVSDGDSTWNYRPSTKTYTKIAAAQTPDGVAANLAVLDVLGFFADAKTTKTDREESITVDGRTYNCWVL
Ga0068859_10041130723300005617Switchgrass RhizosphereMRPVVISLVVMFSLAAQELPDATSLRKQAQDAAKKRQSIQYVSELTGEVTLDGKPVTEVLSGGRRIPVASAVGKQTVAVQNPGKARVELDLGGGNLMVSDGEATWTYRPSTKLYTKITAAQGPD
Ga0068864_10127658823300005618Switchgrass RhizosphereMRLLLLSLVLTWTLAAQALPDAAALRKQAQDAAKKRQSIQYISELIGEVTQNGAPVTEVVSLGRRIPVSSSVGKQTVAVQNPGKARVELELGAGNLMVSDGEATWTYRPSTKVYTKIAAAQGPDGVAANLAV
Ga0068870_1090872013300005840Miscanthus RhizosphereMRPAVISLVVMFSLAAQELPDAASLRKQVQEAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPSTKLYTKITAAQGPDGVAA
Ga0068870_1126329413300005840Miscanthus RhizosphereMRSMAIASLLVLTLTLSAQDLPDAATITKQVQEAAKQRKSIEYVREITGEVTLDGKAVTEVNALGRRVPVQSSIGKQTVAVQNPGKARIDVQIGG
Ga0068863_10173950413300005841Switchgrass RhizosphereMRSMAIASLLLLTLTLGAQDLPDAATITKQVQEAAKQRKSIEYVREITGEVTLDGKPVTEVNASGRRIPVQSSIGKQIVALQNPGKARIDLQLGGGNLLVSDGDSTLTYRPSTKTYTKIAAAQTPDGIAANLAVLDVLGF
Ga0068860_10227580613300005843Switchgrass RhizosphereMRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTYRPSTKIYTKIAAAQTPEGMAANLAVLDVLGFFADTKTTKTSRQDSVTIDGTTYDCWV
Ga0097621_10053735823300006237Miscanthus RhizosphereMRPAVISLVIMFSLAAQELPDAASLRKQLQDAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGDATWTYRPSTKLYTKITAAQGPDGVAANLAVLDVMGF
Ga0097621_10111249513300006237Miscanthus RhizosphereMRLLLLSLSLTFTLLAQELPDAAALRKQVQDAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVSSAVGKQTVAVQNPGKVRVELELGAGNLMVSDGESTWTYRPSTKLYTKITAAQGPDGVAANLAVLDVMGFFEDAKTAKTARSVGIRVD
Ga0097621_10206356413300006237Miscanthus RhizosphereMRLITIPVMVLFTLAAQELPDAASLRKQVQDAAKNRKSIQYVSEITEEVTLGGKPVTEVDSSGRKIPVQTAVGKQSVAVQNPGKARVELELGAGNLMVSDGESTWTYRPSTKL
Ga0068871_10088368813300006358Miscanthus RhizosphereMRPAVISLVVMFSLAAQELPDAASLRKQVQEAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPSTKLYTKITAAQGPDGVAANRAVLDVMGFFEDAKSAKTVRSETIGIDGQSY
Ga0068871_10103699413300006358Miscanthus RhizosphereMRLITIPVMVLFTLAAQELPDAATLRKQVQDAAKARKSIQYVSEITGEVTLDGKPVTEVVSTGRKIPVQTSVGKQTVAIQNPGKARVELELGAGNLMVSDGESTWTYRPSTKLYTKITAAQA
Ga0075421_10268203413300006845Populus RhizosphereMRLIATASILLFTFLAQELPDAAVLKKQAQDASKRRQSIQYVRELIGEVTLDGKAVTEVNAGGRRIPVPSAVGKQTVAIANPGKARVELELGAGNLMVSDGDTTWTYRPATKVYTKLAAAQSPDGVAANLAVLDVIGFFEDPKSAKTVRDETIEMD
Ga0079216_1083524023300006918Agricultural SoilMRSLAIASMLLLALTLGAQDLPGAASITKQVQEAAKQRKSIEYVKQITGEVTLDGKPVTEITALGRRVPVQSSIGKQSVAIQNPGKARIDLQLGGGSLLVSDGDSTWTYRPSTKTYTKIAAAQTPDGTAA
Ga0105245_1116945213300009098Miscanthus RhizosphereMLLLTLTLSAQELPDAATIAKQVQEAAKQRKSIEYVKELTGEVTLNGKTVTEVNASGRRIQVQSSVGKQSVAIQNPGKARIDLQLGGGSLLVSDGELTWTYRPSTKTYTRIAAAQTPDGVAANLAVLDVLGFFADSRTTKTT
Ga0111538_1113201613300009156Populus RhizosphereMLLLTLTLSAQELPDAATIAKQVQEAAKQRKSIEYVKELTGEVTLDGKPVTEVNASGRRIQVQSSVGKQTVAIQNPGKARIDLQLGGGSILVSDGELTWTYRPSTRTYTRIAAAQTPDGVAANLAVLDVLGFFAD
Ga0111538_1236939813300009156Populus RhizosphereMLLLTLTLSAQELPDAATIAKQVQEAAKQRKSIEYVKELTGEVTLDGKPVTEVNASGRRIQVQSSVGKQTVAIQNPGKARIDLQLGGGSLLVSDGELTWTYRPSTRTYTRIAAAQTPDGVAANLAVLDVLG
Ga0105242_1264444413300009176Miscanthus RhizosphereMFLLTLTLTARQLPDAATISKQVQEATKQRKSIQYVRELTGEFTLDGKAVTEVISSGRRYPAASAIGKQTVSLQNPGKARIDLQIGGGNLMVTDGEATWTYRPSTKLYTKVAAAQTPNGQAADLA
Ga0105248_1001474113300009177Switchgrass RhizosphereMRPAVISLVVMFSLAAQELPDAASLRKQVQEAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPSTKLYTKITAAQGADGVAANLAVLDVMGFFEDAKSAKTVRSETIGIDGQS
Ga0105347_102590513300009609SoilMRFIATVFMLGFTLATQELPDAATLRKQVQDASKQRQSIQYVREIIGEVTLDGKPVTEVNANGRRIPVPSAVGKQTVAVSNPGKARVELELGAGNLMVSDGDTTWTYRPSTKIYTKLAAAQSPDGVAANLAVLDVMGFFEDSKTAKTVREERIEMDGQT
Ga0126372_1291655113300010360Tropical Forest SoilMRLITIPVMVLFTLAVQELPDAATLRKQVQDAAKNRKSIQYVSEITGEVTLDGKPVTEVNSGGRKIPVQTAVGKQNVAVQNPGKARVELDLGAGNLMVSDGESTWTYRPSTKLYTKISAVQSADGVAA
Ga0134127_1297737913300010399Terrestrial SoilMRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLT*
Ga0134122_1272297713300010400Terrestrial SoilMFLLTLTLTARQLPDAATISKQVQEATKQRKSIQYVRELSGDFTLDGKPVTEVISSGRKYPASSAIGKQTVSLQNPGKARIDLQIGGGNLMVTDGEATWTYRPSTRLYTKVAAAQTPNGQAADLAVLDVIGFFADAKNWKTTGEE
Ga0134121_1224068613300010401Terrestrial SoilMRLITIPVMVLFTLAAQELPDAATLRKQVQDAAKARKSIQYVSEITGEVTLDGKPVTEVVSTGRKIPVQTSVGKQTVAIQNPGKARVELELGAGNLMVSDGESTWTYRPSTKLYTKITAAQAPD
Ga0134121_1267946313300010401Terrestrial SoilMRPAILSLVMIFSLAAQELPDAASLRKQVQDSAKKRQSIQYVSELTGEVTLDGKPVSEVNSMGRRIPVASAIGKQTVAVQNPGKARVELDLGVGSLMVSDGEATWTYRPSTKLYSKITAAQGPDGVAANL
Ga0134123_1323516013300010403Terrestrial SoilMRLITLPVVVLFTLAAQELPDAASLRKQVQDAAKARKSIQYVSEITGVVTLDGKPVTEVNSLGRKVPVQTAVGKQTVAVQNPGKARVELELGAGNLMVSDGESTWTYRPATKLYSKITAAQAPDGVAPVRERADERLRVL
Ga0137326_104247513300011417SoilMRFIATIFTLVITLAAQELPDAATLRKQVQDASKQRQSIQYVREIIGEVTLDGKPVTEVNANGRRIPVPSTVGKQTVAVSNPGKARVELELGAGNLMVSDGDTTWTYRPSTKIYTKLAAAQSPDGVAANLAVLDVMGFFEDSKTAKT
Ga0137321_107962823300012175SoilMRFIATVFMLGFTLATQELPDAATLRKQVQDAAKQRQSIQYVREIIGEVTLDGKPVTEVNANGRRIPVPSAVGKQTVAVSNPGKARVELELGAGNLMVSDGDTTWTYRPSTKIY
Ga0157281_109469613300012883SoilMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTYRPSTKIYTKIAAAQTPEGMAANLAVLDVLGFFADTKTTKTSRQD
Ga0157303_1012597913300012896SoilMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTYRPSTKIYTKIAAAQTPEGMAANLAVLDVLGFFADTKTTKTSRQDSVTIDGT
Ga0157299_1028213613300012899SoilMRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTYRPSTKIYTKIAAAQTPEGMAANLAVLDV
Ga0157289_1028904013300012903SoilMRSAILALVMMYSFAVQDLPDAASLRKQVQDAAKKRQSIQYVSELTGEVTLDGKPVTEVMSGGRRIPVTSAVGTQTVAVQNPGKARVELALGAGSLMVSDGEATWTYRPSTKVYTKITAAQGPDGVAANLAVLDVMGFFEDAKSAKT
Ga0157283_1009373323300012907SoilMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTYRPSTKIYTKIAAAQTPEGMAANLAVLDV
Ga0164308_1164779423300012985SoilMRPAVISLVVVFSLAAQDFPDAASLRKQVQDAAKKRQSIQYVSELTGEVTLDGKPVTEVLSLGRRIPVSSSVGKQTVAVQNPGKARVELDLGVGNLMVSDGEATWTYRPSTKLYTKITAAQGPDGVAAN
Ga0157378_1089928613300013297Miscanthus RhizosphereMRSVAIASLLMLTLTLGAQDLPDAATINKKVQEAAKQRKSIEYVKEITGEVTLDGKPVTEVSALGRRVPVQSSIGKQTVSLQNPGKARIDLQ
Ga0163162_1115350223300013306Switchgrass RhizosphereMRLLLLSLSLTFTLLAQELPDAAALRKQVQDAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVSSAVGKQTVAVQNPGKVRVELELGAGNLMVSDGESTWTYRPSTKLYTKIT
Ga0157375_1085465723300013308Miscanthus RhizosphereMRPAIISIVMMFSLVVQELPDAASLRKQVQDAAKKRQSIQYVVELTGEVTLDGKPVTEVNSLGRRIPVASAVGKQTVAVQNPGKARVELDLGVGSLMVSDGEATWTYRPSTKLYTKISAAQGPDGVAANLAVLDVMGFFEDAKSAKTVRAETITVDG
Ga0075320_112614613300014255Natural And Restored WetlandsMRSLVIASILLVTLTIQAQELPDAATITAQVQEAAKQRKSIQYVRELVGEVTLDGKPVTEVQALGRRIPVQSSVGKQTVALENPGKARIDLQLRGGNLLVSDGESTWMYRASTKTYTKLAAAQTPEGMAANLVVL
Ga0075302_108348523300014269Natural And Restored WetlandsMRRAAIASILLLTLTLTAQQLPEAAALTKQVQEAAKQRKSIQYVRELTGEFTLDGKPVTEVISSGRRFPATSAIGKQTVSLQNPGKARIDLQLGGGYLMVTDGEATWTYR
Ga0157380_1036272223300014326Switchgrass RhizosphereMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTYRPSTKIYTKIAAAQTPEGMAANLAVLDVLGFFADTK
Ga0157377_1048603913300014745Miscanthus RhizosphereMRSLAALFLLLSMATPAQQLPDAGTIKREVQDAAKQRKSLEYVREISGEVTLAGKPVTEVRALGRAIPVQTSIGKQTVVLQNPGKASIDLQLGGGSLLVSDGETTWTYRPSTKTYTKITAVQTPDGV
Ga0157379_1207927313300014968Switchgrass RhizosphereMRPAVISLVVMFSLAAQELPDAASLRKQVQEAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPSTKLYTKITAAQGADGVAANLAVLDVMGFFEDA
Ga0157376_1108493513300014969Miscanthus RhizosphereMRLITLPVVVLFTLAAQELPDAASLRKQVQDAAKARKSIQYVSEITGVVTLDGKPVTEVNSLGRKVPVQTAVGKQTVAVQNPGKARVELELGAGNLMVSDGESTWTYRPATKLYSKITAAQAPDGVAANLAVLDVMGFFEDQKTAKTVRSESVIIDGQNF
Ga0173478_1018658913300015201SoilMLLLTLTLSAQELPDAATIAKQVQEAAKQRKSIEYVKELTGEVTLDGKPVTEVNASGRRIQVQSSVGKQTVAIQNPGKARIDLQLGGGSILVSDGELTWTYRPSTRTYTRIAAAQTPDGVAANLAVLDVLGFFADSKTTKTTR
Ga0132256_10346330323300015372Arabidopsis RhizosphereMLLLTLTLSAQDLPDAATITKQVQEAAKQRKSIEYVKEIPGEVPLGGKPVTEVNASGRRVPVQSSIGKQTVALQNPGKALIDLQLGSGNLLVSDGDTTWTYRPSTKTYTKIAAAQTP
Ga0182040_1064054113300016387SoilMRPAIILIVMMFSLAAQELPDAASLRKQVQDAAKTRHSIQYVSELTGEVTLDGKPVTEVISLGRHIPVASAIGKQTVAIQNPGKARVELDLGAGNLMVSDGDATWTYRRSTKLYMKVTAAQGSDG
Ga0163161_1021849013300017792Switchgrass RhizosphereMRSVAIASLLMLTLTLGAQDLPDAATINKKVQEAAKQRKSIEYVKEITGEVTLDGKPVTEVSALGRRVPVQSSIGKQTVSLQNPGKARIDLQLGGGSLLVSDGETTVTYRPSTKTYTKIAAAQTQEGIAANLAVLDVLG
Ga0190266_1097195213300017965SoilMRRLAIASMFLLTLTVTAQQLPEAATLTKQVQEATKQRKSIQYVRELSGEFTLDGKPVTEVISSGRRYPAASAIGKQTVSLQNPGKARIDLQIGGGNLMVTDGEATWTYRPSTKLYTKIAAAQTPNGQAADLAVLDVIGFFADAKSWKTT
Ga0184629_1055971013300018084Groundwater SedimentMRLAVISLVVMFSLAAQDLPDAAALRKQVQDTAKKRQSIQYVSELIGEVTLDGKPVTEVNSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPSTKLYTKIVAAQGPDGVAANLAVLDVMGFFEDAKSAKTVRSETIDID
Ga0190274_1066721723300018476SoilMRRLAIASMFLLTLTVTAQQLPEAATLTKQVQEATKQRKSIQYVRELSGEFTLDGKPVTEVISSGRRYPAASAIGKQTVSLQNPGKARIDLQIGGGNLMVTDGEATWTYRPSTKLYTKIAAAQTPNGQAADLAVLDVIGFFADAKSWKTTGEETI
Ga0190271_1194952323300018481SoilMRSIAIASMLLLTLTLSAQELPDAATIARQVQEAAKQRKSIEYVKELTGEVTLDGKPVTEVNASGRRIQVQSSVGKQTVAIQNPGKARIDLQLGGGSLLVSDGELTWTYRPSTKTYTRIAAAQTPDGV
Ga0173482_1043646323300019361SoilMRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGET
Ga0173479_1063778913300019362SoilMRLAISAFMMLMTLIAQDLPDASALRKQVQDAAKKRQTIQYVSELTGEVTLDGKPVPEVISGGRRIPVTSAVGKQTVAVQNPGKARVELELGAGNLMVSDGEATWTYRPSTKLYTKITAAQGPDGVAANL
Ga0187893_1095264713300019487Microbial Mat On RocksMRLTTIASILLFTFFVQALPDATLLKKQVQDASKRRQTIQYVRELIGEVTLDGKPVTEVNAAGRRIPVPSAVGKQTVAISNPGKARVELELGAGNLMVSDGDTTWT
Ga0222622_1038467023300022756Groundwater SedimentMRPAVISLVVMFSLAAQELPDAAALRKQVQEAAKKRQSIQYVSELIGEVTLDGKPVTEVNSGGRRIPVNSAVGKQTVAVQNPGKARVELSIGAGNLMVSDGEATWTYRPSTKLYTKITAAQGPDGVAANLAVLDVMGFFEDAKSAK
Ga0207656_1042365213300025321Corn RhizosphereMRPAVISLVVMFSLAAQELPDAASLRKQVQEAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPSTKLYTKITAAQGADGVAANLAVLDVMGFFEDAKSAKTVRSETIGIDGQSYDCWVITSNVKI
Ga0207650_1187813713300025925Switchgrass RhizosphereAITAFVMLMTLIAQDLPDASTLRKQVQDAAKKRQSIQYVSELTGEVTLDGKPVTEVNSLGRRIPVASAVGKQTVAIQNPGKARVELDLGAGNLMVSDGEATWTYRPSTKLYSKITAAQGPDGVAANLAVLDVMGFFEDAKSAKTVRSETIGIDGQSFDCWVITSNVKI
Ga0207659_1108545323300025926Miscanthus RhizosphereMRSLAALFLLLSMATPAQQLPDAGTIKREVQDAAKQRKSLEYVREISGEVTLAGKPVTEVRALGRAIPVQTSIGKQTVVLQNPGKASIDLQLGGGSLLVSDGETTWTYRPSTK
Ga0207701_1041801513300025930Corn, Switchgrass And Miscanthus RhizosphereMRSVAIASLLMLTLTLGAQDLPDAATINKKVQEAAKQRKSIEYVKEITGEVTLDGKPVTEVSALGRRVPVQSSIGKQTVSLQNPGKARIDLQLGGGSLLVSDGETTVTYRPSTKTYTKIAAAQTQEGIAANLAVLD
Ga0207644_1067907313300025931Switchgrass RhizosphereMRPAVISLVVMFSLAAQELPDAASLRKQVQEAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPSTKLYTKI
Ga0207670_1069231223300025936Switchgrass RhizosphereMRPAVISLVVMFSLAAQELPDAASLRKQVQEAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPSTK
Ga0207669_1115863613300025937Miscanthus RhizosphereMRSVAIASLLLLTLTLGAQDLPDAATITKQVQESAKQRKSIEYVREITGEVTLEGKPVTQVNASGRRIPVQSAIGKQTVALQNPGKARIDLQLGGGNLLVSDGETTLTYRPSTKT
Ga0207691_1018990623300025940Miscanthus RhizosphereMRPAVISVVVMLSLAAQELPDAASLRTPAQAAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPSTKLYTKITAAQGP
Ga0207691_1145759013300025940Miscanthus RhizosphereMRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLL
Ga0207679_1042238713300025945Corn RhizosphereMRSLATVLILLTLTIQGQQLPEAATITKQIQDATKQRKSLEYIREISGEVTLDGKPVTEVNASGRRILVQTEIGKQTVALQNPGKARIDLQLGGGGSLLVSDGDSTWNYRPSTKTYTKIAAAQTPDGVAANLAVLDVLGFFADAKTTKTDREESITVD
Ga0207651_1122710923300025960Switchgrass RhizosphereMRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARID
Ga0207651_1124268513300025960Switchgrass RhizosphereMRSLATVLILLTLTIQGQQLPEAATITKQIQDATKQRKSLEYIREISGEVTLDGKPVTEVNASGRRILVQTEIGKQTVALQNPGKARIDLQLGGGGSLLVSDGDSTWNYRPSTKTYTKIAAAQ
Ga0207703_1094695313300026035Switchgrass RhizosphereMRSVAIASLLMLTLTLGAQDLPDAATINKKVQEAAKQRKSIEYVKEITGEVTLDGKPVTEVSALGRRVPVQSSIGKQTVSLQNPGKARIDLQLGGGSLLVSDGETTVTYRPSTKTYTK
Ga0207703_1153699513300026035Switchgrass RhizosphereMRLLLLSLSLTFTLLAQELPDAAALRKQVQDAAKKRQSIQYVSELIGEVTLDGKPVTEVLSGGRRIPVSSAVGKQTVAVQNPGKVRVELELGAGNLMVSDGESTWTYRPSTKLYTKITAAQGPDGVAANLAVLDVMGFFEDAKTAKTARSEGIRVDGQSFDCWVVTSSVKI
Ga0207674_1190767413300026116Corn RhizosphereMRSLATVLILLTLTIQGQQLPEAATITKQIQDATKQRKSLEYIREISGEVTLDGKPVTEVNASGRRILVQTEIGKQTVALQNPGKARIDLQLGGGGSLLVSDGDSTWNYRPSTKTYTKIAAAQTPDGVAANLAVLDVLGFFADAKTTKTDREESITVDGRTYNCWVLTSSV
Ga0207683_1076441423300026121Miscanthus RhizosphereMRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGKAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLTY
Ga0209974_1026721913300027876Arabidopsis Thaliana RhizosphereMRSVAIASMLLLTLTLSAQELPDAATIAKQVQEAAKQRKSIEYVKELTGEVTLDGKPVTEVNASGRRIQVQSSVGKQTVAIQNPGKARIDLQLGGGSILVSDGELTWTYRPSTRTYTRIAAAQTPDGVAANLAVLDVLGFFADSKTTKTTRQESI
Ga0209382_1166861513300027909Populus RhizosphereMRLIATASILLFTFLAQELPDAAVLKKQAQDASKRRQSIQYVRELIGEVTLDGKAVTEVNAGGRRIPVPSAVGKQTVAIANPGKARVELELGAGNLMVSDGDTTWTYRPATKVYTKLAAAQSPDGVAANLAVLDVIGFFEDPKSAKTVRDETIEMDG
Ga0268265_1249234713300028380Switchgrass RhizosphereMRSVAIASLLMLTLTLGAQDLPDAATINKKVQEAAKQRKSIEYVKEITGEVTLDGKPVTEVSALGRRVPVQSSIGKQTVSLQNPGKARIDLQLGGGSLLVSDGETTVTYRPSTKTYTKI
Ga0307497_1058173113300031226SoilMRPAVISLVVMFSLAAQELPDATSLRKQVQDAAKKRQSIQYVSELTGEVTLDGKPVTEVNSLGRRIPVALAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPSTRLYTKITAAQGPDGVAANLAVL
Ga0170824_11980902913300031231Forest SoilMRFAAIALMVMFTLAAQELPDAATLRKQVQDAAKNRQSIQYISELTGEVTLDGKPVTEVNSLGRRIPVASAVGKQTVAVQNPGKARVELDLGAGNLMVSDGEATWTYRPATKLYTKISAAQSQDGVAANLAVLDVMGFFEDAKSAKTVRSETIAIDGQSYDCWVLTS
Ga0310907_1063110623300031847SoilMRSVAIASMLLLTLTLSAQELPDAAGIAKQVQEAAKQRKSIEYVKELTGEVTLNGKPVTEVNASGRRIQVQSSVGKQSVAIQNPGKARIDLQLGGGSLLVSDGELTWTYRPSTKTYTRIAAAQTPDGVAANLAVLDVLGFFADSRTTKTTRQETITIDGTA
Ga0310892_1072502823300031858SoilMRSMTIASLLLLSLTLGAQDLPDAATITRQVQDAAKQRKSIEYVREITGEVTLDGIAVTEVNATGRRIPVQSSIGKQTVAIQNPGKARIDLQLGGGSLLVSDGETTLT
Ga0310885_1023677723300031943SoilMRSVAIASMLLLTLTLSAQELPDAATIAKQVQEAAKQRKSIEYVKELTGEVTLNGKPVTEVNASGRRIQVQSSVGKQSVAIQNPGKARIDLQLGGGSLLVSDGELTWTYRPSTKTYTRIAAAQTPDGVAANLAVLDVLGFFADSKTTKTTRQETITIEGTAYDC
Ga0310884_1099254413300031944SoilMRSVAIASMLLLTLTLSAQELPDAATIAKQVQEAAKQRKSIEYVKELTGEVTLNGKPVTEVNASGRRIQVQSSVGKQSVAIQNPGKARIDLQLGGGSLLVSDGELTWTYRPSTKTYTRIAAAQTPDGVAANLAVLDVLGFFADSRTTKTTR
Ga0315912_1010125533300032157SoilMRPGILALIVTFSLAAQDLPDAASLRKQVQDAAKKRQSIQYVSELTGEVTLDGKSITEVISGGRRIPVASAVGTQTVAVQNPGKARVELALGAGSLMVSDGEATWTYRPSTKVYTKITAAQGPDGVAANLAVLDVMGFFEDAKSAKTVRSEVIEVDGTN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.