Metagenome Family F092237

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F092237
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	114 residues
Representative Sequence	METNAARVHEPRQAVFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLAVAEQNLLPLDI
Number of Associated Samples	91
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.63 %
% of genes near scaffold ends (potentially truncated)	99.07 %
% of genes from short scaffolds (< 2000 bps)	94.39 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.280 % of family members)
Environment Ontology (ENVO)	Unclassified (39.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.224 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.73% β-sheet: 15.45% Coil/Unstructured: 51.82%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13531	SBP_bac_11	50.47
PF12804	NTP_transf_3	0.93
PF01512	Complex1_51K	0.93
PF00582	Usp	0.93
PF08308	PEGA	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1894	NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit (chain F)	Energy production and conversion [C]	0.93
COG4656	Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit	Energy production and conversion [C]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	92.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	91.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	91.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	91.59 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	91.59 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	91.59 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	91.59 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	91.59 %
Streptomyces sp. AA0539	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. AA0539	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10376124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300003267\|soilL1_10019664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3481	Open in IMG/M
3300003319\|soilL2_10126507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1166	Open in IMG/M
3300004281\|Ga0066397_10125707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. AA0539	564	Open in IMG/M
3300005206\|Ga0068995_10146360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300005290\|Ga0065712_10431265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300005290\|Ga0065712_10814053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300005293\|Ga0065715_10830237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300005295\|Ga0065707_10471769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300005332\|Ga0066388_102909428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300005337\|Ga0070682_101296015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300005344\|Ga0070661_101409107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300005354\|Ga0070675_100016053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5934	Open in IMG/M
3300005354\|Ga0070675_101813692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300005355\|Ga0070671_100267430	All Organisms → cellular organisms → Bacteria → Proteobacteria	1453	Open in IMG/M
3300005365\|Ga0070688_100190726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1427	Open in IMG/M
3300005366\|Ga0070659_101083096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300005441\|Ga0070700_100180690	All Organisms → cellular organisms → Bacteria → Proteobacteria	1468	Open in IMG/M
3300005444\|Ga0070694_100424079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300005455\|Ga0070663_101545377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300005456\|Ga0070678_100962914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300005459\|Ga0068867_100478903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1066	Open in IMG/M
3300005466\|Ga0070685_10444174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300005467\|Ga0070706_100579718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300005468\|Ga0070707_101336995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300005518\|Ga0070699_100814599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300005530\|Ga0070679_101157490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300005544\|Ga0070686_100899997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300005545\|Ga0070695_100618848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300005545\|Ga0070695_101113649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300005548\|Ga0070665_100910741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300005548\|Ga0070665_101370781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300005549\|Ga0070704_101722918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300005564\|Ga0070664_101589209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300005577\|Ga0068857_101226866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300005578\|Ga0068854_102080446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300005598\|Ga0066706_10514395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300005718\|Ga0068866_10446357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300005719\|Ga0068861_100594449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300005841\|Ga0068863_100393501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1354	Open in IMG/M
3300006046\|Ga0066652_101314952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300006237\|Ga0097621_102036433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300006755\|Ga0079222_10537498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	870	Open in IMG/M
3300006845\|Ga0075421_102656938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300006903\|Ga0075426_10675571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300006904\|Ga0075424_101131863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300006914\|Ga0075436_100235542	All Organisms → cellular organisms → Bacteria → Proteobacteria	1301	Open in IMG/M
3300006914\|Ga0075436_100473170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300009094\|Ga0111539_10615880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1264	Open in IMG/M
3300009147\|Ga0114129_11504945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300009148\|Ga0105243_11693538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300009162\|Ga0075423_12548613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300009162\|Ga0075423_12870999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300009176\|Ga0105242_11444543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300009177\|Ga0105248_10207850	All Organisms → cellular organisms → Bacteria → Acidobacteria	2206	Open in IMG/M
3300009177\|Ga0105248_10633082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M
3300010042\|Ga0126314_10926844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300010047\|Ga0126382_12481593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300010358\|Ga0126370_12445193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300010359\|Ga0126376_13013761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300010360\|Ga0126372_11340518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300012519\|Ga0157352_1079445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300012896\|Ga0157303_10215604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300012913\|Ga0157298_10336399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300012948\|Ga0126375_10437323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300012960\|Ga0164301_10816049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300013308\|Ga0157375_11343446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300013308\|Ga0157375_13031204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300014262\|Ga0075301_1066171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300014269\|Ga0075302_1049797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300014326\|Ga0157380_11018740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300014745\|Ga0157377_10431733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300014969\|Ga0157376_10375876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1367	Open in IMG/M
3300014969\|Ga0157376_10758113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300014969\|Ga0157376_11555348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300015077\|Ga0173483_10175629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300015372\|Ga0132256_102785999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300015373\|Ga0132257_102075538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300015373\|Ga0132257_102271031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300015374\|Ga0132255_104635644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300018476\|Ga0190274_12527903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300025885\|Ga0207653_10096653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300025919\|Ga0207657_10891604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300025921\|Ga0207652_11201322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300025921\|Ga0207652_11606007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300025922\|Ga0207646_11081893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300025925\|Ga0207650_10465653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1053	Open in IMG/M
3300025941\|Ga0207711_10673159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300025960\|Ga0207651_11996903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300025972\|Ga0207668_10013348	All Organisms → cellular organisms → Bacteria	5055	Open in IMG/M
3300026088\|Ga0207641_10396953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1323	Open in IMG/M
3300026118\|Ga0207675_100701127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300026550\|Ga0209474_10159338	All Organisms → cellular organisms → Bacteria → Proteobacteria	1464	Open in IMG/M
3300027835\|Ga0209515_10346401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300027873\|Ga0209814_10290677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300027907\|Ga0207428_10045752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3522	Open in IMG/M
3300031854\|Ga0310904_10716419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300031943\|Ga0310885_10683242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300032000\|Ga0310903_10236908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300032180\|Ga0307471_100159108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2188	Open in IMG/M
3300032180\|Ga0307471_101990766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300032180\|Ga0307471_102074190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300032180\|Ga0307471_102254922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300032180\|Ga0307471_103274232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300032205\|Ga0307472_100189680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1550	Open in IMG/M
3300032421\|Ga0310812_10142991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300033412\|Ga0310810_10578256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1087	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.47%
Host-Associated	Host-Associated	49.53%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	49.53%
Terrestrial	Environmental → Terrestrial	48.60%
Aquatic	Environmental → Aquatic	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.02%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Marine	Environmental → Aquatic → Marine	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.50%
Loam	Environmental → Terrestrial → Soil → Loam	18.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.87%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.87%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.93%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.80%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.87%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.87%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.93%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_103761242	3300000550	Soil	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKIAIVSKAVPGVRLSRMLAVAEQNLLPLDIDSAXYLVQQLLGAMAELHGDAPDACH
soilL1_100196642	3300003267	Sugarcane Root And Bulk Soil	LVHAAVMETNAARVHEPRQALFKDGLGTRYRREGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPEGAKLAIVSKAVPGVRLSRMLAVAEQNLLPL
soilL2_101265072	3300003319	Sugarcane Root And Bulk Soil	MESNASRVHDPRQAIFKDGLGARYRRDDADGPFEILVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVYDVEHVPDGAKVAIVSRAAAGVRLSRMLAIAEQNLLPLD
Ga0066397_101257071	3300004281	Tropical Forest Soil	METNAARAHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEPVPDGAKLAIVSKAVPGVRLSRMLAVAEQNLLPLDIDSALYFVQQILGAMAELHGDAPDACHGTLAAE
Ga0068995_101463601	3300005206	Natural And Restored Wetlands	METNAARVYEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSRAVPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLGSMAE
Ga0065712_104312652	3300005290	Miscanthus Rhizosphere	METAGTRVHDPRQAIFKDGLGTRFRHEAADGPVDILLLRDAFAPIRSFEFLVRERVNRLAHVRSTHFARVYDVEHVGDGPKIALISQTAA
Ga0065712_108140531	3300005290	Miscanthus Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAVVSKAVPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLSAMAELHGDAPDA
Ga0065715_108302372	3300005293	Miscanthus Rhizosphere	METAGTRVHDARQAIFKDGLGTRFRHDAADGPVDILVLRDAFAPIRSFEFLVRERVNRLAHVRSTHFARVYDVEHVGDGPKMALI
Ga0065707_104717691	3300005295	Switchgrass Rhizosphere	METNAARVHEPRQAVFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLAVAEQNLLPLDIESALYL
Ga0066388_1029094281	3300005332	Tropical Forest Soil	METNAARAQEPRQALFKDGLGTRNRRDGSDGPLDVLVLRDTFASIPSVEFLIRERINRLAHVRSDSFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLSVAEQNLIPLDLDSALYFIQQLLVAMAELHGDAPDACHGTLAAER
Ga0070682_1012960151	3300005337	Corn Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSKA
Ga0070661_1014091071	3300005344	Corn Rhizosphere	METAGTRVHDARQAIFKDGLGTRFRHDAADGPVDILVLRDAFAPIRSFEFLVRERVNRLAHVRSTHFARVYDVEHVGDGPKMALISQAASGVRLSRMLSTAEQNLLPLDIQSALYLI
Ga0070675_1000160536	3300005354	Miscanthus Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAVVSKAVPGVRLSRMLAVAEQNLLPLDIESALYLVQ
Ga0070675_1018136922	3300005354	Miscanthus Rhizosphere	LVHAAGMETNAARAQEPRQALFKDGLGTRNRRDGSDGPLDVLVLRDTFASIPSIEFLIRERINRLAHVRSDSFARVLDLEHVPDGAKLA
Ga0070671_1002674303	3300005355	Switchgrass Rhizosphere	METAGTRVHDARQAIFKDGLGTRFRHDAADGPVDILVLRDAFAPIRSFEFLVRERVNRLAHVRSTHFARVYDVEHVGDGPKMA
Ga0070688_1001907261	3300005365	Switchgrass Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAIVSKAIPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLGAMAELHGDAPDACHG
Ga0070659_1010830962	3300005366	Corn Rhizosphere	LVHAAHMETNAARVHEPRQALFKDGLGTRYRREGSDGPLDVLVLRDTLASIPSFEFLIRERINRLAHVRGESFAQVLDLEHVPDGAKLAIVSKAIPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLGAMAELHGDAPDACHG
Ga0070700_1001806903	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MELNASRVHEPRQASFKDGLGTRHRRDEVDGSVEVLVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVVDVEHVPDGAKVAI
Ga0070694_1004240791	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MELNASRVHEPRQASFKDGLGTRHRRDEVDGSFEVLVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVVDVEHVPDGAKVAIVSR
Ga0070663_1015453771	3300005455	Corn Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLSAMAELHGDAPDACHGTLAAER
Ga0070678_1009629142	3300005456	Miscanthus Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAVVSKAVPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLSAMAELHGDAPDACHGTLA
Ga0068867_1004789032	3300005459	Miscanthus Rhizosphere	MELNASRVHEPRQASFKDGLGTRHRRDEVDGSFEVLVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVVDVEHVPDGAKVAIVSRAAAGVRLS
Ga0070685_104441741	3300005466	Switchgrass Rhizosphere	METAGTRVHDARQAIFKDGLGTRFRHDAADGPVDILVLRDAFAPIRSFEFLVRERVNRLAHVRSTHFARVYDVEHVGDGPKMALISQAASGVRLSRMLSTAEQ
Ga0070706_1005797181	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDTAASRVHDPRQPIFKDGLGARYRHDSADGPCEVLVLRDGFAPIPSFEFLVRERVNRLAHVRSECFARVYDVEVGGEGPKIALVSQSIAGVRLSRMLSIAEQ
Ga0070707_1013369951	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEANATRVHDPRQAIFKDGLGLRYRRDDADGPFEILVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVYDVEHVPDGAKVAIVSRAAAGVRLSRMLAIAEQNLLPLDVESALHLLRQLLVAMSELHDDAPDACHGTLAAE
Ga0070699_1008145992	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLA
Ga0070679_1011574901	3300005530	Corn Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAVVSKAVPGVRLSRM
Ga0070686_1008999971	3300005544	Switchgrass Rhizosphere	METAGTRVHDARQAIFKDGLGTRFRHDAADGPVDILVLRDAFAPIRSFEFLVRERVNRLAHVRSTHFARVYDVEHVGDGPKMALISQAASGVRLSRMLSTAEQNLLPLDI
Ga0070695_1006188481	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPLGHARGMEANATRVHDPRQAIFKDGLGLRYRRDDADGPFEILVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVYDVEHVPDGAKVAIVSRAAAGVRLSRMLAIAEQNLLPLDVESALHLLRQLLVAMSELHDDAPD
Ga0070695_1011136491	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LVHAAHMETNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLAVAEQN
Ga0070665_1009107411	3300005548	Switchgrass Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAVVSKAVPGVRL
Ga0070665_1013707811	3300005548	Switchgrass Rhizosphere	METAGTRVHDARQAIFKDGLGTRFRHDAADGPVDILVLRDAFAPIRSFEFLVRERVNRLAHVRSTHFARVYDVEHVGDGPKMALISQAASGVRLSRMLST
Ga0070704_1017229181	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	METAGTRVHDPRQAIFKDGLGTRFRHEAADGPVDILLLRDAFAPIRSFEFLVRERVNRLAHVRSTHFARVYDVEHVGDGPKIALISQTAAGVRLSRLLSTAEQNLLPLDIQSALYLIDQILVAMAELHDDAPD
Ga0070664_1015892091	3300005564	Corn Rhizosphere	MDTAASRVHDPRQPIFKDGLGARYRHDSADGPCEVLVLRDGFAPIPSFEFLVRERVNRLAHVRSECFARVYDVEVGGEGPKIALV
Ga0068857_1012268661	3300005577	Corn Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLA
Ga0068854_1020804461	3300005578	Corn Rhizosphere	MELNASRVHEPRQASFKDGLGTRHRRDEVDGSVEVLVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVVDVEHVPDGAKVAIVSRAAAGVRLSRMLAISEQNLLPLDVESALSLLREI
Ga0066706_105143951	3300005598	Soil	METAGTRVHDSRQATFKDGLGTRHRREGTDGPFEVLVLRDVFAPIPSFEFLVRERVNRLAHVRGEHFARVYDVEHVPEGAKIAIVSRAV
Ga0068866_104463571	3300005718	Miscanthus Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAVVSKAVPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLSA
Ga0068861_1005944491	3300005719	Switchgrass Rhizosphere	MELNASRVHEPRQASFKDGLGTRHRRDEVDGSFEVLVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVVDVEHVPDGAKVAIVSRAAAGVRLSRMLAISEQNLLPLDVESALS
Ga0068863_1003935012	3300005841	Switchgrass Rhizosphere	LVHAAHMETNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAVVSKAVPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLSAMAELHGDAPDACHGTLA
Ga0066652_1013149521	3300006046	Soil	METASARAHDPRQAHFKDGLGTRHRRDASDGPCEVLILRDAFAPIPSFEFLVRERVNRLAHVRSERFARVYDVEHVSEGAKIALVSRSVPGVRLSRMLAGAEQNLLPLDVESAFYLIHQILTGMAELHEDAPDACDGALAAE
Ga0097621_1020364331	3300006237	Miscanthus Rhizosphere	METNAARVHEPRQAVFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLSAMAELHGDAPDACHGTLA
Ga0079222_105374982	3300006755	Agricultural Soil	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHVRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSKMLSVAEQNLIPLDLDSALYFIQ
Ga0075421_1026569381	3300006845	Populus Rhizosphere	METNAARAHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLA
Ga0075426_106755712	3300006903	Populus Rhizosphere	METNAARAQEPRQALFKDGLGTRNRRDGSDGPLDVLVLRDTFASIPSVEFLIRERINRLAHVRSDSFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLSVAEQNLIPL
Ga0075424_1011318631	3300006904	Populus Rhizosphere	MDTAGTRPHDPRQPIFKDGLGARYRHDSAEGPCEILALRDVFAPIPSFEFLVRERVNRLAHVRGDHFARVYDVEHAGDGSKIVLVSQGIAGVRLS
Ga0075436_1002355421	3300006914	Populus Rhizosphere	MDTAGTRVHDPRQPIFKDGLGARYRHDSAEGPCEILVLRDGFAPIPSFEFLVRERVNRLAHVRSGHFARVYDVEHAGDAPKIVLVSQSIAGVRLSR
Ga0075436_1004731702	3300006914	Populus Rhizosphere	METAGTRVHDPRQAIFKDGLGTRFRHEAADGPVDILLLRDAFAPIRSFEFLVRERVNRLAHVRSTHFARVYDVEHVGDGPKIALISQTAAGVRLSRLLSTAEQNLLPLDIQSALYLIDQILVAMAELHDDAPDACHGTLASERIVVTSTGDII
Ga0111539_106158802	3300009094	Populus Rhizosphere	METNAARVHEPRQALFKDGLGTRYRREGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHLRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLGAMAELHGVAPDACHGTLAAERIVVTPDGNLV
Ga0114129_115049452	3300009147	Populus Rhizosphere	METNAARVHEPRQALFKDGLGTRFRRDGSDGPLDVLVLRDTLASIPSFEFLIRERINRLAHVRSESFAQVLDLEHVPDGAKLAIVSKAVPGVRLSRMLAVAEQNLLRV
Ga0105243_116935381	3300009148	Miscanthus Rhizosphere	MELNASRVHEPRQASFKDGLGTRHRRDEVDGSVEVLVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVVDVEHVPDGAKVAIVSRAAAGVRLSRMLAISEQNLLPLDVESALSLLREILTAMSELH
Ga0075423_125486131	3300009162	Populus Rhizosphere	METNAARVHEPRQALFKDGLGTRYRREGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHMRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLAVAEQNLLPLDIE
Ga0075423_128709992	3300009162	Populus Rhizosphere	METNAARVHEPRQALFKDGLGTRFRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHVRSESFARVLDLEHVPDGAKLAIVS
Ga0105242_114445432	3300009176	Miscanthus Rhizosphere	MELNASRVHEPRQASFKDGLGTRHRRDEVDGSVEVLVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVYDVEHVPDGAKVAIVSRAAAGVRLSRMLAIAE
Ga0105248_102078501	3300009177	Switchgrass Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAIV
Ga0105248_106330821	3300009177	Switchgrass Rhizosphere	METNAARAQEPRQVLFKDGLGSRYRRDGSDGPLDVLILRDTFASIPSFEFLIRERINRLAHVRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSKMLSVA
Ga0126314_109268442	3300010042	Serpentine Soil	METHAARPHEPRQAVFKDGLGTRHRRDGSDGPLDILVLRDTFASIPSFEFLLRERIDRLAHVRSERFARVIDLEHVPDGAKVAIVSKAVPGVRLSRMLSVAEQNLLPLDVESALCLIHQIVSAMAELHEDAPDACHGT
Ga0126382_124815931	3300010047	Tropical Forest Soil	METNAARVHEPRQAVFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGTKLAVVSKAVPGVRL
Ga0126370_124451932	3300010358	Tropical Forest Soil	METNAARAQEPRQALFKDGLGTRNRRDGSDGPLDVLVLRDTFASIPSVEFLIRERINRLAHVRSDSFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLSVAEQNLIPLDLDSALYFIQQLLGAMAELHGDAPDAC
Ga0126376_130137612	3300010359	Tropical Forest Soil	METNAARAHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSKAVPGV
Ga0126372_113405181	3300010360	Tropical Forest Soil	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSLEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAIVSKAVPGVRLSRML
Ga0157352_10794451	3300012519	Unplanted Soil	METNAARVHEPRQAVFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLAVAEQNLLPLDIESALY
Ga0157303_102156042	3300012896	Soil	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAVVSKAVPGVRLSRMLAVAEQNLLPL
Ga0157298_103363991	3300012913	Soil	METNAARAQEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAVVSKAVPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLSAMAELH
Ga0126375_104373231	3300012948	Tropical Forest Soil	METNAARAHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEPVPDGAKLAIVSKAVPGVRLSRMLAVAEQNLLPLDIDSALYFVQQILGAMAELHGDAPDACHGT
Ga0164301_108160492	3300012960	Soil	METNAARAQEPRQALFKAGLGTRNRRDGSDGPLDVLVLRDTFASIPSVEFLIRERINRLAHVRSDSFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLSVAEQNLIPLDLDSAL
Ga0157375_113434462	3300013308	Miscanthus Rhizosphere	METNAARAQEPRQALFKDGLGTRNRRDGSDGPLDVLVLRDTFASIPSIEFLIRERINRLAHVRSDSFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLSVAEQNLIPLDLDSALYFIQQLLGAMA
Ga0157375_130312042	3300013308	Miscanthus Rhizosphere	METAGTRVHDARQAIFKDGLGTRFRHDAADGPVDILVLRDAFAPIRSFEFLVRERVNRLAHVRSTHFARVYDVEHVGDGPKMALISQAASGVRLSRMLSTAEQNLLPLDIQ
Ga0075301_10661712	3300014262	Natural And Restored Wetlands	METNAARAHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDSFASIPSLEFLIRERINRLAHIRSESFTRVLDLEHVPDGAKLAIVSKA
Ga0075302_10497972	3300014269	Natural And Restored Wetlands	MEANAARAHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFTRVLDLEHVPDGAKLAI
Ga0157380_110187401	3300014326	Switchgrass Rhizosphere	MELNASRVHEPRQASFKDGLGTRHRRDEVDGSFEVLVLRDAFAPIPSFEFLVGERVNRVAHVRSEHFARVVDVEHVPDGAKVAI
Ga0157377_104317332	3300014745	Miscanthus Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAIVSKAIPGVRLSRMLAVAEQNLLPLDIETALYLVQQLLSAMAELHGDA
Ga0157376_103758762	3300014969	Miscanthus Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAVVSKAVPGVRLSRMLAVA
Ga0157376_107581131	3300014969	Miscanthus Rhizosphere	METNAARVHEPRQAVFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAVVSKAVPGVRLSRMLAVA
Ga0157376_115553481	3300014969	Miscanthus Rhizosphere	METNAARAQEPRQALFKDGLGTRNRRDGSDGPLDVLVLRDTFASIPSIEFLIRERINRLAHVRSDSFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLSVAEQNLIP
Ga0173483_101756292	3300015077	Soil	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAIVSKAIPGVRLSRMLAVAEQNLLPLDIETALYLVQQLLSAMAEL
Ga0132256_1027859992	3300015372	Arabidopsis Rhizosphere	MELNASRVHEPRQASFKDGLGTRHRRDEVDGSVEVLVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVDDVEHVPDGAKVAIVSR
Ga0132257_1020755382	3300015373	Arabidopsis Rhizosphere	MDTAGTRVLDPRQPIFKDGLGARYRHDSGDGPCEILVLRDGFAPIPSFEFLVRERVNRLAHVRGNHFARVYDVEHFGDGLKIALVSQSIAGVRLSRMLSIAEQNLLPLDV
Ga0132257_1022710311	3300015373	Arabidopsis Rhizosphere	METAGTRVHDPRQAIFKDGLGTRFRHEAADGPVDILLLRDAFAPIRSFEFLVRERVNRLAHVRSTHFARVYDVEHVGDGPKIALISQTAAGVRLSRLLSTAEQNLLPLDIQSALYLIDQILVAMAELHDDAPDACHGTLASERIVV
Ga0132255_1046356441	3300015374	Arabidopsis Rhizosphere	MESNASRVHEPRQASFKDGLGTRHRRDEVDGSVEVLVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVDDVEHVPDGAKVAIVSRAAAG
Ga0190274_125279031	3300018476	Soil	METHAARPHEPRQAVFKDGLGTRHRRDGSDGPLDILILRDSFASIPSFEFLLRERIDRLAHVRSERFARVVDLEHVPDGAKVAIVSKAVPGVRLSRMLSVAEQNLLPLDIDSALYFIQQ
Ga0207653_100966531	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAIVSKAIPGVRLSRMLAVAEQNLLPLDIESALYLVQQL
Ga0207657_108916042	3300025919	Corn Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAIVSKAIPGVRLSRMLAVAEQNLLPLDIETALYLVQQL
Ga0207652_112013221	3300025921	Corn Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSKAIPGVRLSRMLA
Ga0207652_116060072	3300025921	Corn Rhizosphere	METAGTGVHDPRQPIFRDGLGARYRVDGTDGPCDILVLRDTFASIPSCEFLIRERVNRLAHVRSEQFARVFDVEHGGEGPKIALISQSVPGVRLSRLLTVAEQNL
Ga0207646_110818931	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEANATRVHDPRQAIFKDGLGLRYRRDDADGPFEILVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVYDVEHVPDGAKVAIVSRAAAGVRLSRMLAIAEQNLLPLDVESALHLLRQLLVAMSELHDDAPDACHGTLAAERLVVTSTG
Ga0207650_104656531	3300025925	Switchgrass Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAIVSKAIPGVRLSRMLAVAEQNLLPLDIETALYLVQQLLSAMAELHGDAPDACHGTLAAERVVVTPD
Ga0207711_106731591	3300025941	Switchgrass Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAVVSKAVPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLSAMAELHGDAPDACH
Ga0207651_119969032	3300025960	Switchgrass Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAIVSKAIP
Ga0207668_100133481	3300025972	Switchgrass Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAIVSKAIPG
Ga0207641_103969531	3300026088	Switchgrass Rhizosphere	LVHAAHMETNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAVVSKAVPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLSAM
Ga0207675_1007011271	3300026118	Switchgrass Rhizosphere	MELNASRVHEPRQASFKDGLGTRHRRDEVDGSFEVLVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVVDVEHVPDGAKVAIVSRAAAGVRLSRMLAISEQNLLPLDVESALSLL
Ga0209474_101593383	3300026550	Soil	MMLARRMETASARVHDPRQAIFKDGLGTRHRRDANDGPCEVLVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVYDVEHVGEGAKIALVSRSVP
Ga0209515_103464011	3300027835	Groundwater	METAGTRVHEPRQATFKDGLGTRYRREGTDGPFEVLVLRDTFAPIPSFEFLVRERLNRLAHVRSEHFARVYDVEHVPDGAKLAVVSRAVPGVRLSRMLAVAEQNLLPLDVESALCLI
Ga0209814_102906771	3300027873	Populus Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAIVSKAIPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLSAMAELH
Ga0207428_100457524	3300027907	Populus Rhizosphere	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAIVSKAIPGVRLSRMLAVAEQNLLPLDI
Ga0310904_107164192	3300031854	Soil	METNAARVHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSDSFARVLDLEHVPDGAKLAIVSKAIPGVRLSRMLAVAEQNLLPL
Ga0310885_106832421	3300031943	Soil	METNAARVHEPRQAVFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLAVAEQNLLPLDI
Ga0310903_102369082	3300032000	Soil	METNAARVHEPRQAVFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLAVAEQNLLPLDIESALYLVQQLLSAMAELHGDAPDACHGTLAA
Ga0307471_1001591084	3300032180	Hardwood Forest Soil	MESNASRAHDPRQAIFKDSLGARYRRDDADGPFEILVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVYDVEHVPDGAKVAIVSRAAAGVRLSRLLA
Ga0307471_1019907662	3300032180	Hardwood Forest Soil	MESHASRVHDPRQAIFKDGLGARYRRDDADGPSEILVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARAYDVEHVPDGAKVAIVSRAAAGVRLSRMLAIAEQNLLPLDVESA
Ga0307471_1020741901	3300032180	Hardwood Forest Soil	METNAARAHEPRQALFKDGLGTRYRRDGSDGPLDVLVLRDTFASIPSFEFLIRERINRLAHIRSESFARVLDLEHVPDGAKLAIVSKAVPGVRLSRMLAVAEQNLLPLDIDSALYFVQQI
Ga0307471_1022549221	3300032180	Hardwood Forest Soil	MESNASRVHDPRQAIFKDGLGARYRRDDADGPFEILVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVYDVEHVPDGAKVAIVSRAAAGVRLSRMLAIAEQNLLPLDVESALCVLRQLLTAMSELHDDAPDACHGTLSADRVVVTSTGRVDDVEHV
Ga0307471_1032742321	3300032180	Hardwood Forest Soil	MDSNATRVDPRQATFKDGLGTRYRRDGQDGPVDVLVLRDAFAPIPSFEFLLRERLNRLAHVRSEHIARVYDVEHVTEGAKLAVVSKAVPGVRLARLLAVAEQNLLPLDTDSA
Ga0307472_1001896801	3300032205	Hardwood Forest Soil	MESNASRAHDPRQAIFKDGLGARYRRDDADGPFEILVLRDAFAPIPSFEFLVRERVNRLAHVRSEHFARVYDVEHVPDGAKVAIVSRAAAGVRLSRMLAIAEQNL
Ga0310812_101429912	3300032421	Soil	METNAARAQEPRQVLFKDGLGSRYRRDGSDGPLDVLILRDTFASIPSFEFLIRERINRLAHVRSESFARVLDLEHVPDGAKVAIVSKAVPGVRLSKMLSVAEQNLIPLDLDSALSFIQQLLSAMAELHGDAPDACHGTLAAERVVVTPDGNLVVVE
Ga0310810_105782562	3300033412	Soil	METNAARAQEPRQVLFKDGLGSRYRRDGSDGPLDVLILRDTFASIPSFEFLIRERINRLAHVRSESFARVLDLEHVPDGAKVAIVSKAVPGVRLSKMLSVAEQNLIPLDLDSALSFIQQLLSAMAELHGDAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092237

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences