NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092199

Metagenome Family F092199

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092199
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 75 residues
Representative Sequence MNYKVGGKEFDDWTLAQDQAVQLLEDGHEYVNILQWDEERKTWGLLQELNLERGIMPDPNFNTHSLAPYYVRLRNL
Number of Associated Samples 45
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Viruses
% of genes with valid RBS motifs 36.45 %
% of genes near scaffold ends (potentially truncated) 15.89 %
% of genes from short scaffolds (< 2000 bps) 79.44 %
Associated GOLD sequencing projects 42
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Predicted Viral (34.579 % of family members)
NCBI Taxonomy ID 10239 (predicted)
Taxonomy All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine
(47.664 % of family members)
Environment Ontology (ENVO) Unclassified
(86.916 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(82.243 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.31%    β-sheet: 22.12%    Coil/Unstructured: 60.58%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF00004AAA 34.58
PF01050MannoseP_isomer 8.41
PF03215Rad17 7.48
PF11753DUF3310 4.67
PF08282Hydrolase_3 3.74
PF136402OG-FeII_Oxy_3 2.80
PF14236DUF4338 2.80
PF11623NdhS 2.80
PF01541GIY-YIG 1.87
PF137592OG-FeII_Oxy_5 1.87
PF09116gp45-slide_C 1.87
PF11360DUF3110 0.93
PF00011HSP20 0.93
PF11697DUF3293 0.93
PF01106NifU 0.93
PF07728AAA_5 0.93
PF08406CbbQ_C 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0560Phosphoserine phosphataseAmino acid transport and metabolism [E] 3.74
COG0561Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatasesCoenzyme transport and metabolism [H] 3.74
COG1877Trehalose-6-phosphate phosphataseCarbohydrate transport and metabolism [G] 3.74
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 3.74
COG3769Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamilyCarbohydrate transport and metabolism [G] 3.74
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 0.93
COG0694Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domainPosttranslational modification, protein turnover, chaperones [O] 0.93
COG0714MoxR-like ATPaseGeneral function prediction only [R] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms68.22 %
UnclassifiedrootN/A31.78 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001953|GOS2231_1036025All Organisms → Viruses → Predicted Viral1523Open in IMG/M
3300001958|GOS2232_1022105Not Available1648Open in IMG/M
3300001969|GOS2233_1096526All Organisms → Viruses → Predicted Viral1930Open in IMG/M
3300001974|GOS2246_10078149All Organisms → cellular organisms → Bacteria1516Open in IMG/M
3300002040|GOScombined01_104118638Not Available943Open in IMG/M
3300002518|JGI25134J35505_10062443Not Available897Open in IMG/M
3300005430|Ga0066849_10005754Not Available5060Open in IMG/M
3300005521|Ga0066862_10034750All Organisms → Viruses → Predicted Viral1818Open in IMG/M
3300005521|Ga0066862_10038537All Organisms → Viruses → Predicted Viral1715Open in IMG/M
3300005605|Ga0066850_10054213All Organisms → Viruses → Predicted Viral1575Open in IMG/M
3300006315|Ga0068487_1107366All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae783Open in IMG/M
3300006315|Ga0068487_1402432All Organisms → Viruses → Predicted Viral1003Open in IMG/M
3300006327|Ga0068499_1068676All Organisms → Viruses → Predicted Viral4053Open in IMG/M
3300006327|Ga0068499_1163623Not Available545Open in IMG/M
3300006332|Ga0068500_1194365Not Available628Open in IMG/M
3300006332|Ga0068500_1496447Not Available819Open in IMG/M
3300006752|Ga0098048_1109767All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae831Open in IMG/M
3300006923|Ga0098053_1130176Not Available503Open in IMG/M
3300007283|Ga0066366_10383215All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium609Open in IMG/M
3300008740|Ga0115663_1028758All Organisms → Viruses → Predicted Viral1871Open in IMG/M
3300009103|Ga0117901_1283507All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae802Open in IMG/M
3300009619|Ga0105236_1033711Not Available639Open in IMG/M
3300010149|Ga0098049_1045729All Organisms → Viruses → Predicted Viral1403Open in IMG/M
3300010150|Ga0098056_1328372Not Available503Open in IMG/M
3300010151|Ga0098061_1101053All Organisms → Viruses → Predicted Viral1074Open in IMG/M
3300011013|Ga0114934_10289976All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes739Open in IMG/M
3300012950|Ga0163108_10033361All Organisms → Viruses → Predicted Viral3310Open in IMG/M
3300012950|Ga0163108_10088311All Organisms → Viruses → Predicted Viral1971Open in IMG/M
3300012950|Ga0163108_10096258Not Available1884Open in IMG/M
3300012950|Ga0163108_11114797Not Available509Open in IMG/M
3300012953|Ga0163179_10261960All Organisms → Viruses → Predicted Viral1352Open in IMG/M
3300020312|Ga0211542_1009232All Organisms → Viruses → Predicted Viral2452Open in IMG/M
3300020312|Ga0211542_1053655Not Available741Open in IMG/M
3300020312|Ga0211542_1062864Not Available669Open in IMG/M
3300020357|Ga0211611_1042223All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1080Open in IMG/M
3300020395|Ga0211705_10019710All Organisms → Viruses → Predicted Viral2469Open in IMG/M
3300020395|Ga0211705_10274287All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage S-SM2624Open in IMG/M
3300020395|Ga0211705_10314912All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae580Open in IMG/M
3300020410|Ga0211699_10301819Not Available624Open in IMG/M
3300020411|Ga0211587_10082394All Organisms → Viruses → Predicted Viral1416Open in IMG/M
3300020411|Ga0211587_10114514All Organisms → Viruses → Predicted Viral1162Open in IMG/M
3300020411|Ga0211587_10223124All Organisms → Viruses → environmental samples → uncultured virus784Open in IMG/M
3300020411|Ga0211587_10328221Not Available626Open in IMG/M
3300020411|Ga0211587_10343277All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300020445|Ga0211564_10001505All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae11838Open in IMG/M
3300020470|Ga0211543_10034191All Organisms → Viruses → Predicted Viral2753Open in IMG/M
3300020470|Ga0211543_10043097All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae2409Open in IMG/M
3300020470|Ga0211543_10046220All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae2315Open in IMG/M
3300020470|Ga0211543_10050247All Organisms → Viruses → Predicted Viral2207Open in IMG/M
3300020470|Ga0211543_10062305All Organisms → Viruses → Predicted Viral1952Open in IMG/M
3300020470|Ga0211543_10075389All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1746Open in IMG/M
3300020470|Ga0211543_10080263All Organisms → Viruses → Predicted Viral1684Open in IMG/M
3300020470|Ga0211543_10081278Not Available1671Open in IMG/M
3300020470|Ga0211543_10099185All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1490Open in IMG/M
3300020470|Ga0211543_10114611All Organisms → Viruses → Predicted Viral1370Open in IMG/M
3300020470|Ga0211543_10127226All Organisms → Viruses → Predicted Viral1289Open in IMG/M
3300020470|Ga0211543_10147891Not Available1180Open in IMG/M
3300020470|Ga0211543_10204153All Organisms → Viruses977Open in IMG/M
3300020470|Ga0211543_10205364All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae974Open in IMG/M
3300020470|Ga0211543_10223511Not Available927Open in IMG/M
3300020470|Ga0211543_10229079All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage S-SM2914Open in IMG/M
3300020470|Ga0211543_10286563All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae802Open in IMG/M
3300020470|Ga0211543_10307405All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae770Open in IMG/M
3300020470|Ga0211543_10370632Not Available689Open in IMG/M
3300020470|Ga0211543_10442674Not Available621Open in IMG/M
3300020470|Ga0211543_10464783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium604Open in IMG/M
3300020470|Ga0211543_10586511All Organisms → Viruses524Open in IMG/M
3300020470|Ga0211543_10605063All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300020472|Ga0211579_10026264All Organisms → Viruses → Predicted Viral3755Open in IMG/M
3300020472|Ga0211579_10149257All Organisms → Viruses → Predicted Viral1376Open in IMG/M
3300020472|Ga0211579_10260241Not Available996Open in IMG/M
3300020472|Ga0211579_10551122All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300020472|Ga0211579_10630151Not Available600Open in IMG/M
3300020477|Ga0211585_10005338All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae13527Open in IMG/M
3300020477|Ga0211585_10768490Not Available510Open in IMG/M
3300020478|Ga0211503_10028774All Organisms → Viruses → Predicted Viral3619Open in IMG/M
3300020478|Ga0211503_10030119All Organisms → Viruses → Predicted Viral3521Open in IMG/M
3300020478|Ga0211503_10110659All Organisms → Viruses → Predicted Viral1612Open in IMG/M
3300020478|Ga0211503_10197953All Organisms → Viruses → Predicted Viral1132Open in IMG/M
3300020478|Ga0211503_10205437All Organisms → Viruses → Predicted Viral1106Open in IMG/M
3300020478|Ga0211503_10242003All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1001Open in IMG/M
3300020478|Ga0211503_10637263Not Available552Open in IMG/M
3300021185|Ga0206682_10004376All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae11528Open in IMG/M
3300025096|Ga0208011_1002301Not Available6398Open in IMG/M
3300025096|Ga0208011_1011680All Organisms → Viruses → Predicted Viral2414Open in IMG/M
3300025096|Ga0208011_1091062Not Available657Open in IMG/M
3300025118|Ga0208790_1028770All Organisms → Viruses → Predicted Viral1847Open in IMG/M
3300025131|Ga0209128_1019102All Organisms → Viruses → Predicted Viral3028Open in IMG/M
3300025131|Ga0209128_1082988Not Available1071Open in IMG/M
3300026257|Ga0208407_1029095All Organisms → Viruses → Predicted Viral1925Open in IMG/M
3300031773|Ga0315332_10001012All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae14331Open in IMG/M
3300031775|Ga0315326_10197643All Organisms → Viruses → Predicted Viral1322Open in IMG/M
3300031775|Ga0315326_11031790Not Available501Open in IMG/M
3300032006|Ga0310344_10010073All Organisms → Viruses7074Open in IMG/M
3300032006|Ga0310344_10015383All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae5838Open in IMG/M
3300032006|Ga0310344_10323457All Organisms → Viruses → Predicted Viral1320Open in IMG/M
3300032006|Ga0310344_10427917All Organisms → Viruses → Predicted Viral1136Open in IMG/M
3300032006|Ga0310344_10638327All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Synechococcus phage S-SM2910Open in IMG/M
3300032006|Ga0310344_10689266All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae871Open in IMG/M
3300032006|Ga0310344_10791489Not Available804Open in IMG/M
3300032006|Ga0310344_10944755Not Available725Open in IMG/M
3300032006|Ga0310344_11016252Not Available695Open in IMG/M
3300032011|Ga0315316_10017933All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae5408Open in IMG/M
3300032011|Ga0315316_10585149All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae933Open in IMG/M
3300032011|Ga0315316_10644567All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae882Open in IMG/M
3300032073|Ga0315315_11649743Not Available550Open in IMG/M
3300032820|Ga0310342_103717367Not Available502Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine47.66%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine17.76%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater9.35%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater7.48%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine3.74%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater3.74%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine3.74%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine1.87%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.87%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.93%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.93%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001953Marine microbial communities from Key West, Florida, USA - GS015EnvironmentalOpen in IMG/M
3300001958Marine microbial communities from Gulf of Mexico, USA - GS016EnvironmentalOpen in IMG/M
3300001969Marine microbial communities from Yucatan Channel, Mexico - GS017EnvironmentalOpen in IMG/M
3300001974Marine microbial communities from Upwelling, Fernandina Island, Equador - GS031EnvironmentalOpen in IMG/M
3300002040GS000c - Sargasso Station 3EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300005430Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69EnvironmentalOpen in IMG/M
3300005521Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255EnvironmentalOpen in IMG/M
3300005605Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67EnvironmentalOpen in IMG/M
3300006315Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0770mEnvironmentalOpen in IMG/M
3300006327Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0125mEnvironmentalOpen in IMG/M
3300006332Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0200mEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300007283Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_BEnvironmentalOpen in IMG/M
3300008740Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um, replicate aEnvironmentalOpen in IMG/M
3300009103Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7umEnvironmentalOpen in IMG/M
3300009619Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300012950Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300020312Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX556125-ERR598977)EnvironmentalOpen in IMG/M
3300020357Marine microbial communities from Tara Oceans - TARA_B100000686 (ERX555950-ERR598956)EnvironmentalOpen in IMG/M
3300020395Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX555987-ERR599133)EnvironmentalOpen in IMG/M
3300020410Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)EnvironmentalOpen in IMG/M
3300020411Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)EnvironmentalOpen in IMG/M
3300020445Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300020472Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)EnvironmentalOpen in IMG/M
3300020477Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)EnvironmentalOpen in IMG/M
3300020478Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300026257Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)EnvironmentalOpen in IMG/M
3300031773Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GOS2231_103602533300001953MarineMYQVGGKEFDDWTLAQDQAVQLLEDGHEWVQVLQWDKEHETWGLLQELNLERGIMPDPNFSSSSLAPYYVRLRNYEG*
GOS2232_102210523300001958MarineMYQVGGKDFEDWTDAQDAAVQLLEDGIEYVSILEWNDERKTWGLLQELNLERGIMPDPNFSSSSLAPYYVRLRNYEG*
GOS2233_109652623300001969MarineMTYKVGGKEFDDWTLAQDQAVQLLEDGHEWVQVLQWDKEQETWGLLQELNLERGIMPPSAGWNTNSLAPYYVRLRNYEG*
GOS2246_1007814923300001974MarineMAGYKVGGKKFDDWTDAQDAAMKLLNDGHEYVEVLQWDDGRKTWGLLQELNLERGIKPNPNFSTHSLAPYYIRLRGL*
GOScombined01_10411863823300002040MarineKEFDDWTLAQDQAVQLLEDGHEWVQVLQWDKEQETWGLLQELNLERGIMPPSAGWNTNSLAPYYVRLRNYEG*
JGI25134J35505_1006244313300002518MarineTDAQDAAVQLLEDGVEWVEIFERGEDDGQWYLLQELNLERGIMPDPNFSTWSLAPYYVRLRNL*
Ga0066849_1000575463300005430MarineMLKVEGKEYDDWTDAQDAAVQLLKDGVEWVEIFERAEDDGQWYLLQELNLERGIMPDPNFSTWTLAPYYVRLRKL*
Ga0066862_1003475043300005521MarineDWTEAQDEAVRLLESGMEWVDIMQDAGLLQQLNLKRGIVGTFFSTHVLAPYYVRLRNYGKKN*
Ga0066862_1003853723300005521MarineMAGYKVGGKEFDDWTLAQDQAMQLLEDGIEYVDILIWDDDRKTWGLLQELNLERGVIGKNFSTHSLAPYYVKLRGL*
Ga0066850_1005421333300005605MarineMYKVGGKEFEDWTIAQDQAMQLLEDGLEYVEILLWDDERKTWGLLQELNLERGIKELNFTTHSLAPYYVKLRNL*
Ga0068487_110736623300006315MarineMYQVGGKEFDDWTLAQDAAVQLLEDGIEYVNILIWDEEHKTWGLLQELNLERGIVGKQFNTHVLSPYYVRLRNYEG*
Ga0068487_140243223300006315MarineMLKVDGKEYNDWTEAQDAAVQLLEDGVEWVEILEMAEDDGQWYLLQELNLERGIMPDPNFSTHSLAPYYVRLRNYER*
Ga0068499_106867623300006327MarineMLKVDGKEYNDWTEAQDAAVRLLEDGVEWVEIFEKAEDDGQWYLLQELNLERGIMPDPNFSTHSLAPYYVRLRNYER*
Ga0068499_116362313300006327MarineLENYNVGGKKFDDWTAAQDAAVQLLEDGHEWVQVLQWDKEHETWGLLQELNLERGIMPPSAGWNTNSLTPYYVRLRNYEG*
Ga0068500_119436523300006332MarineAQDKAVQLLEDDVEWVQILIGDTDDWGMLQELNLERGITDSTFSTWTLAPYYVRLRNYEG
Ga0068500_149644713300006332MarineDKAVQLLEDDVEWVQILIGDTDDWGLLQELNLERGIVDKNFNTHVLAPYYVRLRDYEG*
Ga0098048_110976723300006752MarineLVKYKVNGKEFNDWTEAQDVAVQLLKDGVEWVEILERAEDDGQWYLLQELNLERGIMPDPNFSTHSLAPYYVRLRNL*
Ga0098053_113017623300006923MarineDSWTEAQDEAVRLLEEGEETVEVLIWSDRHNGWGMLQELNLERGIMPDPNFSTHSLAPYYVRLRNL*
Ga0066366_1038321513300007283MarineMGSQYKVGGKVFDDWTIAQDQAVQLLEDGIEYVQISIWDEDHETWGLLQELNLERGIMPKPNFSTHSLAPYYVRLRNYEG*
Ga0115663_102875823300008740MarineMAEYKVGGKKFDDWTAAQDAAMKLLNDGHEYVQVLQWDEEHKTWGLLQELNLERGIKPNPNFSTHSLAPYYIRLRGL*
Ga0117901_128350723300009103MarineMYQVGGKEFDDWTLAQDAAVQLLEDGHEYVQILIWNDEHKTWGLLQELNLERGIVDKNFNTHSLAPYYVRLRNYEG*
Ga0105236_103371113300009619Marine OceanicEYDDWTDAQDEAVRLLESGVEYVQILLGDGGLLQELNLERGIMPDPNFSTTTLAPYYVRLRNYEQ*
Ga0098049_104572923300010149MarineVKYKVNGKEFNDWTEAQDVAVQLLKDGVEWVEILERAEDDGQWYLLQELNLERGIMPDPNFSTHSLAPYYVRLRNL*
Ga0098056_132837223300010150MarineNDWTEAQDVAVQLLKDGVEWVEILERAEDDGQWYLLQELNLERGIMPDPNFSTHSLAPYYVRLRNL*
Ga0098061_110105313300010151MarineMAGYKVGGKEFDDWTLAQDQAMQLLEDGIEYVDILIWDDDRKTWGLLQELNLERSVIGKNFSTHSLAPYYVRLRGL*
Ga0114934_1028997623300011013Deep SubsurfaceMYKVGGKEFEGWTEAQDAAVQLLEDGIEYVSIMQWDDERKTWGLLQELNLERGVMPDPNFNSYSLSPYYVRLRGL*
Ga0163108_1003336183300012950SeawaterEYEDWTDAQDEAVRLLESGVEYVQIILDDGLLQELNLERGIMPKPNFSTHSLAPYYVRLRNYEG*
Ga0163108_1008831123300012950SeawaterMAGYKVGGKEFDDWTLAQDQAMQLLEDGIEYVDILIWDDDRKTWGLLQELNLERGVIGKNFSTHSLAPYYVRLRGL*
Ga0163108_1009625853300012950SeawaterMNLLKRFSIYYKGGTFNMTYKVEGKEFEDWTEAQDEAVRLLNDGVEWVQIMQGDGLLQELNLEQGIEPKPHFSTSTLAPYYWRLRYG*
Ga0163108_1111479713300012950SeawaterTEAQDEAVRLLEEGEETVEVLIWSDRHDGWGMLQELNLERGIMPDPNFSTHSLAPYYVRLRNL*
Ga0163179_1026196023300012953SeawaterMLKVEGKEYDDWTDAQDAAVQLLKDGVEWVEILEMAEDDGQWYLLQELNLERGIMPDPNFSTWTLAPYYVRLRKL*
Ga0211542_100923213300020312MarineMYKVGGKEFDDWTLAQDQAVQLLEDGHEWVQVLQWDKDHETWGLLQELNLERGIMPDPTFSTSSLAPYYVRLRNYEG
Ga0211542_105365513300020312MarineWTLAQDAAVQLLNDGIEYVNIMQWDDERKTWGLLQELNLERGIMPNPQFSTSTLAPYYVRLRNYEGN
Ga0211542_106286423300020312MarineMYQVGGKDFEDWTDAQDAAVQLLEDGIEYVSILEWNDERKTWGLLQELNLKRGIVSQQFNTHSLAPYYVRLRNYEG
Ga0211611_104222313300020357MarineMGSQYQVGGKEFDDWTDAQDAAVQLLEDGHEYVQVLQWDDKNETWGLLQELNLERGIMPKPNFSTHSLAPYYVQLRGL
Ga0211705_1001971043300020395MarineMGSQYQVGGKEFDDWTDAQDAAVQLLEDGHEYVQVLQWDDKNETWGLLQELNLERGIMPKANFSTHSLAP
Ga0211705_1027428723300020395MarineMYQVGGKKFDDWTLAQDAAVQLLEDGHEWVQVLQWDKEHETWGLLQELNLERGIMPPSAGWNTNSLTPYYVRLRNYEG
Ga0211705_1031491223300020395MarineMIKYQVGGKEFDDWTLAQDQAVQLLEDGIEYVSIMQWDKEHETWGLLQELNLERGIVPKQHFSTHTLAPYYVRLRNYEG
Ga0211699_1030181923300020410MarineMYKVGDTEFDDWTEAQDEAVRLLEEGEEWVEIFVWNEEVKEWGLLQQLNMDRGIMPNSNFSTASLAPYYVKLRNYEGN
Ga0211587_1008239423300020411MarineMYKVGGKEFDDWTDAQDHAVQLLEDGVEYVDILQWDDERKTWGLLQELNLERGIVGKHFNSLVLAPYYVRLRNYEG
Ga0211587_1011451433300020411MarineMAGYKVGGKEFEDWTLAQDQAMQLLEDGVEYVNVLQWDEERKTWGLLQELNLERGIMPPSAGWNTNCLAPYYVRLRGL
Ga0211587_1022312413300020411MarineMTYTVGDKEYEDWTEAQDEAVRLLNDGVEYVQILLDDGLLQELNLERGIVGKNFSTHVLAPYYVRLRGL
Ga0211587_1032822123300020411MarineMYQVGGKEFDDWTDAQDVAVQLLEDGHEYVQVLQWDKERKTWGLLQELNLERGIVGKQFNTHVLAPYYVRLRNYEG
Ga0211587_1034327723300020411MarineMAEFKVGGKEFEDWTQAQDSAMRLLNDGIEYVTIEQWNETKKTWEGLQELNLERGIIPDPNFSNKSLAPYYVRLRGL
Ga0211564_10001505193300020445MarineMYKVGGKEFDDWTLAQDQAVQLLEDGIEYVRILQWDEERETWALLQELNLERGIVPKKNFSTTTLTPHYVRLRNYEG
Ga0211543_1003419123300020470MarineMNYKVGGKEFDDWTLAQDQAVQLLEDGHEYVNILQWDEERKTWGLLQELNLERGIMPDPNFNTHSLAPYYVRLRNL
Ga0211543_1004309723300020470MarineMYQVGGKDFEDWTDAQDAAVQLLEDGIEYVSILEWNDERKTWGLLQELNLERGIMPDPNFSSSSLAPYYVRLRNL
Ga0211543_1004622023300020470MarineMYQVGGKEFEDWTLAQDAAVQLLNDGIEYVNIMQWDDERKTWGLLQELNLERGIMPNPQFSTSTLAPYYVRLRNYEGN
Ga0211543_1005024733300020470MarineMGSEYQVGGKEFDDWTLAQDAAVQLLEDGHEYVQILQWDDERKTWGLLQELNLERGIVGKQFNTHVLAPYYVTLRNL
Ga0211543_1006230523300020470MarineMYQVGGKEFDDWTAAQDAAVQLLNDGIEYVNILQWDDERKTWGFLQELNLERGIMPDPNFSSSSLAPYYVRLRNYEG
Ga0211543_1007538923300020470MarineMYKVGGKEFDDWTLAQDQAVQLLNDGHEYVHIFQWNDQHQTWGCLQELNLERGIMPNPNFSSNSLAPYYVRLRNYEGN
Ga0211543_1008026313300020470MarineMYRVEDTEFDDWTAAQDEAVRLLEDGEEWVRVFVWNKEGNFWGCLQELNLERGIMPNPNFSTASLAPYYVRLRNYEGN
Ga0211543_1008127823300020470MarineMGTQYQVEGKEFDDWTAAQDSAVFLLEQGHEYVSILQWSDEDQTWCLLQELNLERGIRPPATGWNTHCLTPYYVRLRNYEGN
Ga0211543_1009918533300020470MarineMPYQVGGKEFEDWTDAQDAAVQLLEDGHEWVQVLIWDDEDETWGLLQELNLERGIMPNPTFSSTSLAPYYVRLRNYEGN
Ga0211543_1011461123300020470MarineMSYTVEGKEFEDWTEAQDEAVRLLDDGVEYVQILTDGGLLQELNLERGIKPEKNFNTHVLAPYYWRLRYG
Ga0211543_1012722623300020470MarineMYQVGGKEFDDWTAAQDAAVQLLEDGIEYVQVLTWDDERKTWGLLQELNLERGIVGKSFSTHVLAPYYARLRNYEK
Ga0211543_1014789113300020470MarineMGSQYKVGGKEFDDWTLAQDAAVQLLNDGHEYVNILIWDKEHETWGLLQELNLERGIVGKQFSTHVLAPYYVRLRNYEG
Ga0211543_1020415323300020470MarineMYQVGGKKFDDWTDAQDAAVHLLESGHEYVQILEWDDKNETWGLLQELNLERGIMPDPNFNTHALAPYYVRLRNL
Ga0211543_1020536423300020470MarineMFKVSGKEFDDWTDAQDAAVKLLDEGIEYVNIMQWDEEHQTWGLIQELNLERGIVSQQFNTHSLAPYYVRLRGL
Ga0211543_1022351123300020470MarineMGSQYQVGGKEFDDWTAAQDAAVQLLEDGHEYVQVLQWNKDNETWGLIQELNLERGIMPNPQFSTSTLAPYYVRLRNYEGN
Ga0211543_1022907923300020470MarineMYKVGDTEFDDWTEAQDEAVRLLEEGQEWVRILIWDGDHNEWGLLQELNMDNGIIPSPNFSSASLAPYYVKLRNL
Ga0211543_1028656323300020470MarineMTYQVGGKEFEDWTAAQDAAVQLLDDGVEYVRVMQWNDERKTWGLIQELNLERGIMPNPNFGTTTLSPYYVRLRNL
Ga0211543_1030740523300020470MarineMYKVGGKEFDDWTLAQDQAVQLLEDGHEWVQVLIWDKDHETWGLLQELNLERGIMPDPNFSSSSLAPYYVRLRNYEG
Ga0211543_1037063223300020470MarineMGAQYQVGGKEFDDWTAAQDAAVQLLEDGHEWVQVLQWDENRESWGLLQELNLERGIMPDPNFSTSSLAPYYVRLRNYEGNR
Ga0211543_1044267423300020470MarineMYKVGGKEFDDWTLAQDQAVQLLEDGHEWVQVLQWDKEHDTWGLLQELNLERGIMPDPNFSSASLAPYYVRLRNYEG
Ga0211543_1046478323300020470MarineMGSQYKVGGKEFEDWTLAQDQARQLLEDGIEYVSILQWDDERKTWGLLQELNLERGIIGKQFNTHVLAPYYVRLRGL
Ga0211543_1058651133300020470MarineEYEDWTEAQDEAVRLLNDGVEYVQILTDGGLLQELNLERGIVGKNFSTHVLAPYYVRLRG
Ga0211543_1060506323300020470MarineMAGYKVGGKEFEDWTLAQDQAIQLLEDGHEYIEVLQWDEERKTWGLIQELNLERGIMPPASGWNTHCLAPYYVKLRGL
Ga0211579_1002626413300020472MarineMVVYKVGGKEFEDWTIAQDQAMQLLNDGIEYVSILQWDDKDKTWGLIQELNLERGVMPDPNFNTHSLAPYYVRLRGL
Ga0211579_1014925733300020472MarineMLKVEGKEYDDWTDAQDAAVQLLKDGVEWVEILEMAEDDGQWYLLQELNLERGIMPDPNFSTWTLAPYYVRLRNYEGN
Ga0211579_1026024123300020472MarineMYQVGGKEFDDWTLAQDQAVQLLEDGIEYVNILIWDEERKTWGLLQELNLERGIVGKQFNTHVLAPYYVRLRNYEG
Ga0211579_1055112223300020472MarineMVEYRVCGKEYEDWTQAQDSAMRLLNDGIEYVTIEQWNETKKTWEGLQELNLERGIIPDPNFSNKSLAPYYVRLRGL
Ga0211579_1063015113300020472MarineMGSQYKVGGKEFEDWTQAQDAAVHLLEDGHEYVQILQWNEKDETWGLLQELNLERGIIPPSSGWNTNSLTPYYVRLRNYEG
Ga0211585_10005338193300020477MarineMYKVDGKEFDDWTLAQDQAVQLLNDGHEYVNILQWSDDNKSWGLLQELNLERGIKGDTFSTQVLAPYYVRLRGL
Ga0211585_1076849013300020477MarineLIKFKVKGREFDDWTLAQDSAVQLLEDGHEYVKVLQWDDKNETWGLLQELNLERGIMPKPNFSTHSLAPYYVRLRNYEG
Ga0211503_1002877453300020478MarineMYKVGGKEFDDWTAAQDAAVQLLNDGHEYVSILQWDKEHETWGLLQELNLERGIVGKQFSTHVLAPYYVRLRNYEG
Ga0211503_1003011923300020478MarineMYKVGGKEFDDWTLAQDQAVQLLEDGHEWVQVLQWDKEHETWGLLQELNLERGIMPDPTFSTSSLAPYYVRLRNYEG
Ga0211503_1011065933300020478MarineMTYQVGGKEFDDWTAAQDAAVQLLDDGVEYVRIMQWNDERKTWGLIQELNLERGIMPNPNFGTTTLSPYYVRLRNL
Ga0211503_1019795323300020478MarineMYKVGGKEFDDWTLAQDQAVQLLEDGHEWVKVLIWDDDHKTWGLLQELNLEIGIIPPSSGWNTQSLAPYYVRLRNYEG
Ga0211503_1020543723300020478MarineWTDAQDVAVQLLEDGHEYVQVLQWDKERKTWGLLQELNLERGIVGKQFNTHVLAPYYVRLRNYEG
Ga0211503_1024200323300020478MarineMMYKVGGKEFNDWTAAQDSAVFLLENGHEYVQVLQWSEEDQTWALLQELNLERGIVSKNFNTHSLAPYYVRLRNYEGN
Ga0211503_1063726313300020478MarineMYQVGGKEFDDWTLAQDAAVQLLEDGHEWIQILIWDNDHQTWGLLQELNLERGIMPDPNFSSSSLAPYYVRLRNYEG
Ga0206682_10004376103300021185SeawaterMLKVEGKEYNDWTDAQDAAVQLLEDGVEYVEILERSEDDGQWYLLQELNLERGIMPDPNFSTWTLAPYYVRLRKL
Ga0208011_100230183300025096MarineMYKVGGKEFEDWTIAQDQAMQLLEDGLEYVEILLWDDERKTWGLLQELNLERGIKELNFTTHSLAPYYVKLRNL
Ga0208011_101168053300025096MarineMAGYKVGGKEFDDWTLAQDQAMQLLEDGIEYVDILIWDDDRKTWGLLQELNLERGVIGKNFSTHSLAPYYVRLRGL
Ga0208011_109106213300025096MarineMARYKVEDAEFDTWTEAQDEAVRLLEEGEETVEVLIWSDRHDGWGMLQELNLERGIMPDPNFSTHSLAPYYVRLRNL
Ga0208790_102877013300025118MarineMAGYKVGGKEFDDWTLAQDQAMQLLEDGIEYVDILIWDDDRKTWGLLQELNLERGVIGKNFSTHSLAPYYVKLRGL
Ga0209128_101910213300025131MarineMAGYKVGGKEFDDWTLAQDQAMQLLEDGIEYVDILIWDDDRKTWGLLQELNLERGVIGKNFSTHSLAPYYVRLR
Ga0209128_108298813300025131MarineVTLKIGEKEYDDWTDAQDAAVQLLEDGVEWVEIFERGEDDGQWYLLQELNLERGIMPDPNFSTWSLAPYYVRLRNL
Ga0208407_102909523300026257MarineMLKVEGKEYDDWTDAQDAAVQLLKDGVEWVEIFERAEDDGQWYLLQELNLERGIMPDPNFSTWTLAPYYVRLRKL
Ga0315332_1000101223300031773SeawaterMLKVEGKEYDDWTEAQDAAVQLLEDGVEWVEIFEKAEDDGQWYLLQELNLERGIMPDPNFSTWTLAPYYVRLRKL
Ga0315326_1019764333300031775SeawaterMLKVEGKEYDDWTDAQDAAVQLLKDGVEWVEILEMAEDDGQWYLLQELNLERGIMPDPNFSTWTLAPYYVRLRKL
Ga0315326_1103179013300031775SeawaterMYQVGGKEFDSWTDAQDAAVQLLNDGIEYVNILEWDDDRKTWGLLQELNLERGIMPKPNFSTHSLTPYYVRLRNYEG
Ga0310344_10010073153300032006SeawaterMLKVDGKEYNDWTEAQDAAVQLLEDGVEWVEILEMAEDDGQWYLLQELNLERGIMPDPNFSTHSLAPYYVRLRNYER
Ga0310344_1001538383300032006SeawaterMFKVEDQEFDDWTAAQDEAVRLLESGQEWVSILQWSEEHKEWGLLQELNMDQGIMPSPNFSTSSLAPYYVRLRNL
Ga0310344_1032345723300032006SeawaterMYQVGGKEFDDWTLAQDAAVQLLEDGHEWVHVLQWDKENETWGLLQELNLERGIMPPSAGWNTNSLTPYYVRLRNYEG
Ga0310344_1042791723300032006SeawaterMAGYKVGGKEFEDWTLAQDQAMQLLEDGVEYVNVLQWDKERKTWGLLQELNLERGIMPPSTGWNTNCLAPYYVRLRGL
Ga0310344_1063832723300032006SeawaterMGSQYKVGGKEFDDWTLAQDQAVQLLEDGHEWVQVLQWDKEHETWGLLQELNLERGIMPPSGGWNTNSLAPYYVRLRNYEG
Ga0310344_1068926633300032006SeawaterMTYQVGGKEFDDWTAAQDAAVQLLDDGVEYVRIMQWDDERKTWGLLQELNLERGIMPNPNFGTTTLSPYYVRLRNL
Ga0310344_1079148933300032006SeawaterMKYQVGGKEFDDWTVAQDQAMQLLEDGVEYVEVSQWNDKRKTWSLLQELNLERGIKPKQHWDTHSLTPYYVRLRNL
Ga0310344_1094475523300032006SeawaterMNYQVGGKEFDDWTKAQDAAVQLLDDGIEYVSILQWDDEHQTWGLLQELNLERGIMPNPTFSTHSLAPYYVRLRNYER
Ga0310344_1101625223300032006SeawaterMFKVSGKEFDDWTAAQDAAVKLLDEGIEYVNIMQWNEEHQTWGLIQELNLERGIVSDQFNTHSLAPYYSRLRGL
Ga0315316_10017933113300032011SeawaterMGSQYKVGGKEIEDWTEAQDAAVQLLEDGQEYVHILQWNEKDETWGLLQELNLERGIVGTTFNTHVLAPYYVRLRNYEG
Ga0315316_1058514923300032011SeawaterVYKVGGKEFEDWTIAQDQAMQLLNDGIEYVSILQWDDKDKTWGLLQELNLERGVMPDPNFNTHSLAPYYVRLRGL
Ga0315316_1064456723300032011SeawaterMLKVEGKEYDDWTDAQDAAVQLLKDGVEWVEIFEKAEDDGQWYLLQELNLERGIMPDPNFSTWTLAPYYVRLRKL
Ga0315315_1164974323300032073SeawaterVYKVGGKEFEDWTIAQDQAMQLLNDGIEYVSILQWDDKDKTWGLLQELNLERGVMPDPNFNTHSLAPYYVRL
Ga0310342_10371736723300032820SeawaterLMLKVDGKEYNDWTEAQDAAVQLLEDGVEYVEILEMAEDDGQWYLLQELNLERGIMPDPYFSTHSLAPYYVRLRNYER


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