Metagenome / Metatranscriptome Family F092174

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092174
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	88 residues
Representative Sequence	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGTTTVAMRPRA
Number of Associated Samples	87
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.19 %
% of genes near scaffold ends (potentially truncated)	23.36 %
% of genes from short scaffolds (< 2000 bps)	85.98 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.467 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.234 % of family members)
Environment Ontology (ENVO)	Unclassified (33.645 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.009 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.14% β-sheet: 35.96% Coil/Unstructured: 57.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00076	RRM_1	18.69
PF01165	Ribosomal_S21	2.80
PF09559	Cas6	1.87
PF00834	Ribul_P_3_epim	0.93
PF01546	Peptidase_M20	0.93
PF13683	rve_3	0.93
PF13365	Trypsin_2	0.93
PF01478	Peptidase_A24	0.93
PF08450	SGL	0.93
PF00271	Helicase_C	0.93
PF02913	FAD-oxidase_C	0.93
PF01436	NHL	0.93
PF16694	Cytochrome_P460	0.93
PF13565	HTH_32	0.93
PF01597	GCV_H	0.93
PF04041	Glyco_hydro_130	0.93
PF12729	4HB_MCP_1	0.93
PF03972	MmgE_PrpD	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	2.80
COG0036	Pentose-5-phosphate-3-epimerase	Carbohydrate transport and metabolism [G]	0.93
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.93
COG0509	Glycine cleavage system protein H (lipoate-binding)	Amino acid transport and metabolism [E]	0.93
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.93
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.93
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.93
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.47 %
Unclassified	root	N/A	49.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.47 %
Unclassified	root	N/A	49.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.47 %
Unclassified	root	N/A	49.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	26.17 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.80 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	22.43 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	21.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	17.76 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	3.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	16.82 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	15.89 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.93 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004803\|Ga0058862_10715305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	692	Open in IMG/M
3300005329\|Ga0070683_100501059	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300005363\|Ga0008090_13679222	Not Available	668	Open in IMG/M
3300005533\|Ga0070734_10000172	All Organisms → cellular organisms → Bacteria	175112	Open in IMG/M
3300005534\|Ga0070735_10733083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	583	Open in IMG/M
3300005541\|Ga0070733_11055622	Not Available	545	Open in IMG/M
3300005564\|Ga0070664_101785421	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300005764\|Ga0066903_104353088	Not Available	757	Open in IMG/M
3300006050\|Ga0075028_100074894	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300006162\|Ga0075030_100036369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4180	Open in IMG/M
3300006162\|Ga0075030_100116301	All Organisms → cellular organisms → Bacteria	2174	Open in IMG/M
3300006354\|Ga0075021_10211666	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300006755\|Ga0079222_12044566	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	565	Open in IMG/M
3300006797\|Ga0066659_10174319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1551	Open in IMG/M
3300009792\|Ga0126374_10889699	Not Available	689	Open in IMG/M
3300010048\|Ga0126373_10215587	All Organisms → cellular organisms → Bacteria → Acidobacteria	1869	Open in IMG/M
3300010360\|Ga0126372_11229768	Not Available	774	Open in IMG/M
3300010361\|Ga0126378_10134737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2494	Open in IMG/M
3300010366\|Ga0126379_12638549	Not Available	600	Open in IMG/M
3300010373\|Ga0134128_11078491	Not Available	887	Open in IMG/M
3300011120\|Ga0150983_11299973	Not Available	546	Open in IMG/M
3300011120\|Ga0150983_14681398	Not Available	1533	Open in IMG/M
3300011120\|Ga0150983_16374688	All Organisms → cellular organisms → Bacteria → Acidobacteria	1861	Open in IMG/M
3300011340\|Ga0151652_11253080	Not Available	778	Open in IMG/M
3300011340\|Ga0151652_12709303	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300012212\|Ga0150985_105156027	Not Available	846	Open in IMG/M
3300012469\|Ga0150984_109191983	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300012971\|Ga0126369_10901128	Not Available	970	Open in IMG/M
3300013105\|Ga0157369_12161366	Not Available	564	Open in IMG/M
3300014156\|Ga0181518_10060592	All Organisms → cellular organisms → Bacteria	2223	Open in IMG/M
3300014169\|Ga0181531_10990116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300015371\|Ga0132258_10100874	All Organisms → cellular organisms → Bacteria	6800	Open in IMG/M
3300016270\|Ga0182036_11916997	Not Available	503	Open in IMG/M
3300016294\|Ga0182041_12016728	Not Available	537	Open in IMG/M
3300016319\|Ga0182033_10884283	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	790	Open in IMG/M
3300016319\|Ga0182033_11533388	Not Available	602	Open in IMG/M
3300016341\|Ga0182035_10025991	All Organisms → cellular organisms → Bacteria	3716	Open in IMG/M
3300016357\|Ga0182032_10257455	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1360	Open in IMG/M
3300016371\|Ga0182034_10971232	Not Available	733	Open in IMG/M
3300016404\|Ga0182037_11065785	Not Available	706	Open in IMG/M
3300016404\|Ga0182037_12062716	Not Available	512	Open in IMG/M
3300016422\|Ga0182039_10567753	All Organisms → cellular organisms → Bacteria → Acidobacteria	988	Open in IMG/M
3300016445\|Ga0182038_11113286	Not Available	702	Open in IMG/M
3300016445\|Ga0182038_12004326	Not Available	524	Open in IMG/M
3300017955\|Ga0187817_10519176	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	760	Open in IMG/M
3300018034\|Ga0187863_10879145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	509	Open in IMG/M
3300018046\|Ga0187851_10855412	Not Available	511	Open in IMG/M
3300018060\|Ga0187765_11005657	Not Available	572	Open in IMG/M
3300018468\|Ga0066662_10342134	All Organisms → cellular organisms → Bacteria → Acidobacteria	1282	Open in IMG/M
3300021560\|Ga0126371_10908815	Not Available	1024	Open in IMG/M
3300021858\|Ga0213852_1212905	All Organisms → cellular organisms → Bacteria → Acidobacteria	1609	Open in IMG/M
3300025912\|Ga0207707_10532621	Not Available	999	Open in IMG/M
3300026845\|Ga0207760_115784	Not Available	613	Open in IMG/M
3300026895\|Ga0207758_1011303	Not Available	905	Open in IMG/M
3300026895\|Ga0207758_1030283	Not Available	507	Open in IMG/M
3300026909\|Ga0207858_1028507	Not Available	529	Open in IMG/M
3300026979\|Ga0207817_1020263	Not Available	718	Open in IMG/M
3300026981\|Ga0207822_1007930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1218	Open in IMG/M
3300027039\|Ga0207855_1006034	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300027063\|Ga0207762_1033016	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	784	Open in IMG/M
3300027313\|Ga0207780_1009570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	2081	Open in IMG/M
3300027680\|Ga0207826_1063569	Not Available	1018	Open in IMG/M
3300027703\|Ga0207862_1016828	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	2168	Open in IMG/M
3300027826\|Ga0209060_10000147	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	175246	Open in IMG/M
3300027911\|Ga0209698_10015882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7316	Open in IMG/M
3300027911\|Ga0209698_10027280	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5291	Open in IMG/M
3300027911\|Ga0209698_10033049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4710	Open in IMG/M
3300030399\|Ga0311353_10926290	Not Available	735	Open in IMG/M
3300030580\|Ga0311355_11536113	Not Available	574	Open in IMG/M
3300030760\|Ga0265762_1051833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	826	Open in IMG/M
3300031041\|Ga0265755_112180	Not Available	554	Open in IMG/M
3300031099\|Ga0308181_1047405	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	805	Open in IMG/M
3300031241\|Ga0265325_10176526	Not Available	997	Open in IMG/M
3300031250\|Ga0265331_10085121	All Organisms → cellular organisms → Bacteria → Acidobacteria	1465	Open in IMG/M
3300031545\|Ga0318541_10222764	Not Available	1046	Open in IMG/M
3300031546\|Ga0318538_10565280	Not Available	617	Open in IMG/M
3300031573\|Ga0310915_10232548	Not Available	1295	Open in IMG/M
3300031753\|Ga0307477_10112747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1893	Open in IMG/M
3300031753\|Ga0307477_10216510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1330	Open in IMG/M
3300031768\|Ga0318509_10740541	Not Available	545	Open in IMG/M
3300031890\|Ga0306925_11258963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	738	Open in IMG/M
3300031910\|Ga0306923_10778169	Not Available	1059	Open in IMG/M
3300031910\|Ga0306923_11957536	Not Available	596	Open in IMG/M
3300031910\|Ga0306923_12307658	Not Available	536	Open in IMG/M
3300031912\|Ga0306921_10603042	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300031912\|Ga0306921_11663164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	692	Open in IMG/M
3300031945\|Ga0310913_10191821	Not Available	1425	Open in IMG/M
3300031946\|Ga0310910_11542089	Not Available	509	Open in IMG/M
3300031947\|Ga0310909_10783111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	789	Open in IMG/M
3300031954\|Ga0306926_10647051	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1287	Open in IMG/M
3300031954\|Ga0306926_10692966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1236	Open in IMG/M
3300031954\|Ga0306926_11434045	Not Available	800	Open in IMG/M
3300032001\|Ga0306922_11580118	Not Available	653	Open in IMG/M
3300032001\|Ga0306922_11624143	Not Available	642	Open in IMG/M
3300032042\|Ga0318545_10097570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1028	Open in IMG/M
3300032060\|Ga0318505_10362647	Not Available	685	Open in IMG/M
3300032076\|Ga0306924_11015030	Not Available	910	Open in IMG/M
3300032261\|Ga0306920_100521154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1763	Open in IMG/M
3300032261\|Ga0306920_101634516	Not Available	915	Open in IMG/M
3300032261\|Ga0306920_104210410	Not Available	519	Open in IMG/M
3300032783\|Ga0335079_10106992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3165	Open in IMG/M
3300032805\|Ga0335078_10431893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1717	Open in IMG/M
3300032805\|Ga0335078_11204741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300032829\|Ga0335070_10249917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1739	Open in IMG/M
3300033158\|Ga0335077_10870441	All Organisms → cellular organisms → Bacteria → Acidobacteria	911	Open in IMG/M
3300033513\|Ga0316628_103744967	Not Available	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.52%
Host-Associated	Host-Associated	7.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.50%
Aquatic	Environmental → Aquatic	14.02%
Plants	Host-Associated → Plants	6.54%
Human	Host-Associated → Human	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.64%
Freshwater	Environmental → Aquatic → Freshwater	7.48%
Sediment	Environmental → Aquatic → Sediment	6.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.67%
Peat	Environmental → Terrestrial → Peat	1.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.87%
Digestive System	Host-Associated → Human → Digestive System	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.27%
Loam	Environmental → Terrestrial → Soil → Loam	16.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.93%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.41%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.87%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.87%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026895	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 12 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031041	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0058862_107153052	3300004803	Host-Associated	MKRNMELAITRLRVKQAFTAMLVATRRREAFIPGELIVVVDGSELASESRFIRLNGLRASKGLECRYTMGSDELK
Ga0070683_1005010592	3300005329	Corn Rhizosphere	VTIARFRVKEAFSATQVATRRRESFVPGELIILVEGSESPTESRFIRLNGLRPSRSVECRYTIDSEELKQKTEKAVLPRA*
Ga0008090_136792221	3300005363	Tropical Rainforest Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESPSESRFIRVNGIRRTQGAECRYTMGSDELKEKTEIAGTATVAMRPRAHHAGRAEDSPAKVDTGS*
Ga0070681_110155303	3300005458	Corn Rhizosphere	MKRNIEVTITRLRAKEAFTAMLVAARRREAFTPGELIVVVDESELASESRSIRLNGLRASKGLECR
Ga0070734_1000017217	3300005533	Surface Soil	VAITRLRVKETFIATLVATRRRETFVPGELIVVVDGAELPSESRFIRINGLRPSKGLECRYSIGSDELKEKTEVAGRPQ*
Ga0070735_107330831	3300005534	Surface Soil	MAITRFRVKEEFSATLVTTRRRERFVPGELIILVEESAATAESRFIRLNGLRPDRGVECRDSVGSDELREKTEIAGRPQ*
Ga0070733_110556221	3300005541	Surface Soil	VSMTRLRVKEAFSATLVATRRRETFVPGELIVEVDGSELPSESRFIRLNGLRPSRGVECRYTLGSDELKEKTEIAGRPQ*
Ga0070664_1017854211	3300005564	Corn Rhizosphere	LTIDRFRVTTAFSAVQVATRRRESFLPGELIILVNGSDLPSEARFIRLNGLRPSRGAECRYSIGSDELKEKTESAGGSR*
Ga0066903_1043530882	3300005764	Tropical Forest Soil	IEVAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTATVAMRPRAHHAGRAEDSPAKVDTGS*
Ga0075028_1000748942	3300006050	Watersheds	VTITRFRVKEAFSAMLVATRRREMFVPGELLVLVDGSESPSESRFIRVTGIRSSRGAECRYTIGSDELKEKTEIAGRPK*
Ga0075030_1000363694	3300006162	Watersheds	MTVTRFRVKEAFSAMLVTARRRELFVPGELIVLVDGSESPAESRFIRLNGIRPSRGAECRYTMGSDELREKTEIAGTPTDAIRRRAVWL*
Ga0075030_1001163012	3300006162	Watersheds	MTVTRFRIKEAFSATQVATRRREMFVPGELIVLVDGSESPGESRFIRLNGIRPSRGAECRYTMGSDELREKTEVAGRPK*
Ga0075021_102116661	3300006354	Watersheds	NTEVTITRFRVKEAFSAMLVATRRREMFVPGELLVLVDGSESPSESRFIRVTGIRSSRGAECRYTIGSDELKEKTEIAGRPK*
Ga0079222_120445662	3300006755	Agricultural Soil	LKTTVTFRVKEAFFATLVPTRKRENFLPGELVIPVEGSESPSESRFIRLNGLRPQRNIECRYTVGSDEFKEKTELAVRAK*
Ga0066659_101743194	3300006797	Soil	LPTTSFRVKETFSATLIPTRRREQFVPGELVVLINEAESPAESRFVRLNGLRPSRGVECRYAMESGEFREKTEIIVSRRPARPDAGA*
Ga0126374_108896991	3300009792	Tropical Forest Soil	LTITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTTTVAMRPRAHHAGRAEDSPAKVDTGS*
Ga0126373_102155874	3300010048	Tropical Forest Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSETASESRFIRVNGIRRSRGAECRYTMESAELREKTEIANPPRNTAT*
Ga0126372_112297681	3300010360	Tropical Forest Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTATVAMRPRAHHAGRAEDSPAKVDTRS*
Ga0126378_101347372	3300010361	Tropical Forest Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTTTVAMRPRAHHAGRAEDSPAKVDTGS*
Ga0126379_126385492	3300010366	Tropical Forest Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSRGTECRYTMGSDELKEKTEIAGTPTVAMRPREQSDPAS*
Ga0134128_110784912	3300010373	Terrestrial Soil	MLVATRRRETFAAGELIVVVDGSELASESRFIRLNGLRPSKGLECRYTLGSDELKEKTEIAGRPQ*
Ga0150983_112999731	3300011120	Forest Soil	VPITRLRVREAFTATLVATRRRETFVPGELIVMVDGSELRDEARFIRLNGLRSNKGLECRYTIGTDELKEKAEIVGRPQ*
Ga0150983_146813983	3300011120	Forest Soil	MPLDKHGKAEVLVTRLRVKEAFSAMLVASRRRESFAQGELIVVVDGTESTPESRFIRLNGIRPGGLECRYSLGSDELKEKTEVAVRLQ*
Ga0150983_163746885	3300011120	Forest Soil	MTITTRFRVKQEFSAMLVATRRRERFVPGELIVLVDGSESPTESRFIRLNGLRPDRGSECRYCVGAEELREKTEIAGRPQ*
Ga0151652_112530802	3300011340	Wetland	VPNTKLRIKVAFSAMMVATRRREGFAPGELIVLVEGSESPDESRFIRLNGLRPSRGVECRYTMAAVELKEKTEAVARPK*
Ga0151652_127093031	3300011340	Wetland	VTIIRLRVKEGFTATQVATRRRETFVRGELIVMVDGSELPSESRFIRLNGLRQSKGLECRYTLGVDELKEKTEAAGRP*
Ga0150985_1051560272	3300012212	Avena Fatua Rhizosphere	MLVTRLRVKESFSAVLVPTRKRETFLPGELIVLVEGAESPEETRFIRLNGLRPGRGMECRYSVSADELKLKTE
Ga0150984_1091919832	3300012469	Avena Fatua Rhizosphere	MLVTRLRVKESFSAVLVPTRKRETFLPGELIVLVEGAESPEETRFIRLNGLRPGRGVECRYSVSADELKLKTEVAGKPQ*
Ga0126369_109011282	3300012971	Tropical Forest Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTATVAMRPRAHHAGRAEDSPAKVDTGS*
Ga0157369_121613662	3300013105	Corn Rhizosphere	VKEAFSATQVATRRRESFVPGELIILVEGSESPTESRFIRLNGLRPSRSVECRYTIDSEELKQKTEKAVLPRA*
Ga0181518_100605922	3300014156	Bog	MSITRFRVKEEFSAMMVATRRRERFVPGELLVLVEESGSPAESRFIRLNGLRPDRGVECRYSMGSDELRKKTEVAGRAQ*
Ga0181531_109901161	3300014169	Bog	QEFSAAMVATRRRERFAPGELILLVDGSESPDESRFIRLNGLRSNRGAECRYSLGSEELKEKTEIARPSTAVSAR*
Ga0132258_101008744	3300015371	Arabidopsis Rhizosphere	VTIVRFRVKQEFSATLVATRRREKFVPGDLVVLVDGSESPSESRFIRLTGLRRSRGVECRYSVGSVEFQEKTEIAGRPQ*
Ga0182036_119169971	3300016270	Soil	RGIEVAITRFRVKEAFSATLLPTRRSEPFVPGELIVLVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGPTTVAMRPRAESDPAS
Ga0182041_120167281	3300016294	Soil	RREKFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTVAVAMRPRAHHAGRAEDSPAKVDTGS
Ga0182033_108842831	3300016319	Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGTTTVAMRPRAQSDPAS
Ga0182033_115333882	3300016319	Soil	TLLPTRRRERFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTATVAMRPRAHHAGRAEDSPAKVDTGS
Ga0182035_100259913	3300016341	Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMESDELKEKTEIAGTTTVAMRPRLHHAGRAEDSPAKVDTGS
Ga0182032_102574551	3300016357	Soil	VAITRFRVKEAFSATLLPTRRREKFVPGELIVLVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGTTTVAMRPRAQSDPAS
Ga0182034_109712321	3300016371	Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESASESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTTTVAMRPRAHHAGPAKVDTGS
Ga0182037_110657851	3300016404	Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESPSESQFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTTTVAMRPRAHHAGRAEDSPA
Ga0182037_120627161	3300016404	Soil	GHLRRRGIEVAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMESDELKEKTEIAGTTTVAMRPRAHHAGPAKVDTGS
Ga0182039_105677533	3300016422	Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGTTTVVMRPRAQSDPAS
Ga0182038_111132861	3300016445	Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGPTTVAMRPRAESDPAS
Ga0182038_120043261	3300016445	Soil	ITRFRVKEAFSATLLPTRRCEMFVPGELIVLVDGSETASESRFIRVNGIRRSRGAECRYTMESAELREKTEIANPPRNTAT
Ga0187817_105191761	3300017955	Freshwater Sediment	VAIIRLRVKEAFSAALVATRRRETFVPGELIVMVDGSELSSESRFIRLNGLRPDRGVECRFTMGSDELKEKTEIAGRPQ
Ga0187863_108791451	3300018034	Peatland	MAVVRLRVKQAFDAKLVAARRRESFVPGELIVLVGGSESPSESRFIRLNGLRPDGGAECRYTVGSDELKEKTEVAGRPQ
Ga0187851_108554121	3300018046	Peatland	MPVVRLRVKEAFAAKLVAARRRESFVPGELIVLVGGSESPSESRFIRLNGLRPDGGAECRYTVGSDELKQKTEVAGRPQ
Ga0187765_110056571	3300018060	Tropical Peatland	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESASESRFIRVNGIRRSRGAECRYTMGSAELREKTEIANPPRNTAT
Ga0066662_103421342	3300018468	Grasslands Soil	VTTARLKVKTAFSAVQVATRRRENFLPGELIILVDGSESPSESRFIRLNGLRPSRGVECRYSIASEELHEKTEKAGRPQ
Ga0126371_109088152	3300021560	Tropical Forest Soil	VAVTRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSRGTECRYTMGSDELKEKTEIAGTTTVAMRPGAQSDPAS
Ga0213852_12129053	3300021858	Watersheds	VTITRFRVKEAFSAMLVATRRREMFVPGELLVLVDGSESPSESRFIRVTGIRSSRGAECRYTIGSDELKEKTEIAGRPK
Ga0207707_105326212	3300025912	Corn Rhizosphere	MKRNIEVTITRLRAKEAFTAMLVAARRREAFTPGELIVVVDESELASESRSIRLNGLRASKGLECRYTMGSDELREKTEIAGRPQ
Ga0207760_1157842	3300026845	Tropical Forest Soil	FRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTTTVAMRPRAHHAGRAEDSPAKVDTGS
Ga0207758_10113032	3300026895	Tropical Forest Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGTTTVAMRPRAHHAGRAEDSPAKVDTGS
Ga0207758_10302831	3300026895	Tropical Forest Soil	VPTRRRETFLPGELIVLVDGAESPSESRFIRVNGIRRSQGAECRYTMGSAELKEKTEIAGTTIVAMRPRAHHAGRAEDSPAKVDTGS
Ga0207858_10285072	3300026909	Tropical Forest Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIALVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGTAAVAMRPRAHHAGRAEDSPAKVDTGS
Ga0207817_10202631	3300026979	Tropical Forest Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGAESPSESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTTTVAMRPRAHHAGRAEDSPAKVDTGS
Ga0207822_10079302	3300026981	Tropical Forest Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGTTTIAMRPRAHHAGRAEDSPAKVDTGS
Ga0207855_10060343	3300027039	Tropical Forest Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGTTTVAMRPRAQSDPAS
Ga0207762_10330161	3300027063	Tropical Forest Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGTTIVAMRPRAHHAGRAEDSPAKVDTGS
Ga0207780_10095702	3300027313	Tropical Forest Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIALVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGTTTIAMRPRAHHAGCAEDSPAKVDTGL
Ga0207826_10635692	3300027680	Tropical Forest Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMGSDQLKEKTEIAGTTTVAMRPRAHHAGRAEDSPAKVDTGS
Ga0207862_10168282	3300027703	Tropical Forest Soil	VAITRFRVKEAFSATLVPTRRRETFLPGELIVLVDGAESPSESRFIRVNGIRRSQGAECRYTMGSAELKEKTEIAGTTIVAMRPRAHHAGRAEDSPAKVDTGS
Ga0209060_1000014715	3300027826	Surface Soil	VAITRLRVKETFIATLVATRRRETFVPGELIVVVDGAELPSESRFIRINGLRPSKGLECRYSIGSDELKEKTEVAGRPQ
Ga0209698_100158826	3300027911	Watersheds	MTVTRFRVKEAFSAMLVTARRRELFVPGELIVLVDGSESPAESRFIRLNGIRPSRGAECRYTMGSDELREKTEIAGTPTDAIRRRAVWL
Ga0209698_100272801	3300027911	Watersheds	NTEVTITRFRVKEAFSAMLVATRRREMFVPGELLVLVDGSESPSESRFIRVTGIRSSRGAECRYTIGSDELKEKTEIAGRPK
Ga0209698_100330492	3300027911	Watersheds	MTVTRFRIKEAFSATQVATRRREMFVPGELIVLVDGSESPGESRFIRLNGIRPSRGAECRYTMGSDELREKTEVAGRPK
Ga0311353_109262901	3300030399	Palsa	CLRIGADRQPAGWGAFIEMTIATNRFRVKQEFSAMLVATRRRERFVPGELIVLVEGSESPAESRFIRLNGLRPDRGAECRYCMGSDELREKTEIAGRPQ
Ga0311355_115361131	3300030580	Palsa	KQEFSAMLVATRRRERFVPGELIVLVEGSESPAESRFIRLNGLRPDRGAECRYCMGSDELREKTEIAGRPQ
Ga0265762_10518332	3300030760	Soil	MTIATNRFRVKQEFSAMLVATRRRERFVPGELIVLVEGSESPAESRFIRLNGLRPDRGAECRYCMGSDELREKTEIAGRPQ
Ga0265755_1121801	3300031041	Soil	MPTKPRFRVKEAFTAVLVATRRIERFVPGELIIFVDGSESPAETRFIRLNGLRPDRGVECRYSMGSEELREKTEVAGRPQ
Ga0308181_10474051	3300031099	Soil	VTIDRFRVKEAFSAMLVATRRRENFVPGDLIVLVEGSESPTESRFIRLTGLRTSRGVECRYSVGSDELREKTEIAGRPQ
Ga0265325_101765261	3300031241	Rhizosphere	MATNKLQVKETFTAAQVSTRRRETFVPGELIVLIEGSHPPTESQFIRLIGLRPNNGLECRYTIASEELKQKT
Ga0265331_100851212	3300031250	Rhizosphere	MAIATPTIRFRVKQEFSAILVATRRRERFVPGELIILVDGSESPTESRFIRLNGLRPDRGVECRYTLASEELKEKTELAGRPQ
Ga0318541_102227643	3300031545	Soil	VPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTTTVAMRPRLHHAGRAEDSPAKVDTGS
Ga0318538_105652802	3300031546	Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMESDELKEKTEIAGTTTVAMRPRAHHAGRAEDSPAKVDTGS
Ga0310915_102325482	3300031573	Soil	VAITRFRVKEAFSATLLPTRKRERFVPGELIVLVDGSESASESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTVAVAMRPRAHHAGRAEDSPAKVDTGS
Ga0307477_101127475	3300031753	Hardwood Forest Soil	MAITRFRVKEAFSATLLPTRRRETFAPGELIVLVDGSESASESRFIRVNGIRRSRGAECRYTMGSAELREKTE
Ga0307477_102165103	3300031753	Hardwood Forest Soil	MAITRFRVKEAFSAMLLATRRRETFVPGELIVLVDGSESPSESRFIRINGIRRSRGAECRYTVGSAELREKTEIAGPQ
Ga0318509_107405411	3300031768	Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESASESRFIRVNGIRRSQGAECRYTIGSDELKEKTEIAGTATVAMRPRAHHAGRAEDSPAKVDTGS
Ga0306925_112589631	3300031890	Soil	VAITRFRVKEAFSATLLPTRRREMFVPGELIVLVDGSETASESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGTTTVAMRPRAQSDPAS
Ga0306923_107781692	3300031910	Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMESDELKEKTEIAGTTTVAMRPRAHHAGPAKVDTGS
Ga0306923_119575362	3300031910	Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESASESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTATVAMRPRAHHAGRAEDSPAKVDTGS
Ga0306923_123076581	3300031910	Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSETASESRFIRVNGIRRSRGAECRYTMESAELREKTEIANPPRNSAT
Ga0306921_106030422	3300031912	Soil	VAITRFRVKEAFSATLLPTRRREKFVPGELIVLVDGSESPSESRFIRVNGIRRSRGTECRYTIGSDELKEKTEIAGTTTVAMRPGAQSDPAS
Ga0306921_116631641	3300031912	Soil	VAITRFRVKEAFSATLLLTRRRETFVPGELIVLVDRSETASESRFIRVNGIRRSRGAECRYTMESAELREKTEIANPPRNTAT
Ga0310913_101918212	3300031945	Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTIGSDELKEKTEIAGTATVAMRPRAHHAGRAEDSPAKVDTGS
Ga0310910_115420891	3300031946	Soil	PAGWDPFENGHLRKRSIEVAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMESDELKEKTEIAGTTTVAMRPRAHHAGPAKVDTGS
Ga0310909_107831113	3300031947	Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMGSDE
Ga0306926_106470511	3300031954	Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESASESRFIRVNGIRRSQGAECRYTMGSDEIKEKTEIAGTTTVAMRPRAHHAGRAEDSPAKVDTGS
Ga0306926_106929663	3300031954	Soil	VAITRLRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGTTTVAMRPRAQSDPAS
Ga0306926_114340451	3300031954	Soil	VAITRFRVKEAFSATLLLTRRRETFVPGELIVLVDRSETASESRFIRVNGIRRSRGAECRYTMDSAELREKTEIANPPRNTAT
Ga0306922_115801182	3300032001	Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSESPSESQFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTTTVAMRPRAHHAGRAEDSPAKVDTGS
Ga0306922_116241432	3300032001	Soil	DPAGWDPFENGHLRKRSIEVAITRFRVKEAFSATLLPTRKRERFVPGELIVLVDGSESASESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTVAVAMRPRAHHAGRAEDSPAKVDTGS
Ga0318545_100975702	3300032042	Soil	VAITRFRVKEAFSATLLPTRRRERFVPGELIVLVDGSVSPSESQFIRVNGIRRSQGAECRYTIGSDELKEKTEIAGTATVAMRPRAHHAGRAEDSPAKVDTGS
Ga0318505_103626472	3300032060	Soil	VAITRFRVKEAFSATLLPTRRREKFVPGELIVLVDGSESASESRFIRVNGIRRSQGAECRYTMGSDELKEKTEIAGTVAVAMRPRAHHAGRAEDSPAKVDTGS
Ga0306924_110150302	3300032076	Soil	VAITRFRVKETFSATLLPTRRHERFVPGELIVLVDGSESPSESRFIRVNGIRRSQGAECRYTMESDELKEKTEIAGTTTVAMRPRAHHAGPAKVDTGS
Ga0306920_1005211541	3300032261	Soil	VAITRFRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDELKEKTEIAGTTTVAMRPRA
Ga0306920_1016345162	3300032261	Soil	TGGLATFQNGHPRGRSIEVAITRFRVKEAFSATLLPTRRREMFVPGELIVLVDGSETASESRFIRVNGIRRSRGAECRYTMESAELREKTEIANPPRNTAT
Ga0306920_1042104102	3300032261	Soil	VAITRLRVKEAFSATLLPTRRRETFVPGELIVLVDGSESPSESRFIRVNGIRRSRGAECRYTMGSDDLKEKTEIAGTTTVAM
Ga0335079_101069925	3300032783	Soil	MAVSGFRVKEAFSAMMVATRRRERFVPGELIVLVEGSESADESRFIRLNGLRPRGAECRYSMGSDELREKTETVKQPQ
Ga0335078_104318932	3300032805	Soil	MSITRFRVKEEFSAMLVATRRRERFVPGELIVLVEESGSATESRFIRLNGLRPDRGVECRYAVGSDELREKTEIAGRPQ
Ga0335078_112047412	3300032805	Soil	VAITRLRVKEAFTATLVATRRRETFVPGELIIVVDGSELPSESRFIRLNGLRSSKGLECRYTIGADELREKTEIAGRPQ
Ga0335070_102499173	3300032829	Soil	MATTRLRVKEAFTATMVATRRRETFVPGELIVLIEGSESPSESRFIRLNGLRKNNGLERRYTIGSDELKAKT
Ga0335077_108704412	3300033158	Soil	MKTNIEVAITRLRVKEAFTAALVGTRRREAFVPGELIVVVDGSELASESRFIRLNGLRPSKGLEFRYTMGSDELREKTEIAGRPQ
Ga0316628_1037449672	3300033513	Soil	VPNTRFRVKAAFSAMMVATRRREGFAPGELIALIDGAEPATESRFIRINGIRANRGVENRYSIGSDEFKEKTELAVHPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092174

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences