Metagenome / Metatranscriptome Family F092166

Basic Information
Family ID	F092166
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	39 residues
Representative Sequence	FYGRMVPFKTSLKGEIEAPKAAYPFLSTLAKWAQQASK
Number of Associated Samples	100
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.07 %
% of genes from short scaffolds (< 2000 bps)	90.65 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Most Common Taxonomy
Group	Bacteria (72.897 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (8.411 % of family members)
Environment Ontology (ENVO)	Unclassified (22.430 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.991 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.24% β-sheet: 0.00% Coil/Unstructured: 75.76%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF03279	Lip_A_acyltrans	78.50
PF04613	LpxD	2.80
PF00581	Rhodanese	1.87
PF07883	Cupin_2	0.93
PF02449	Glyco_hydro_42	0.93
PF00202	Aminotran_3	0.93
PF05635	23S_rRNA_IVP	0.93
PF13442	Cytochrome_CBB3	0.93
PF14602	Hexapep_2	0.93
PF12867	DinB_2	0.93
PF05299	Peptidase_M61	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	78.50
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	78.50
COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	Cell wall/membrane/envelope biogenesis [M]	2.80
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.93
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.93
COG3975	Predicted metalloprotease, contains C-terminal PDZ domain	General function prediction only [R]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.90 %
Unclassified	root	N/A	27.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.90 %
Unclassified	root	N/A	27.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.90 %
Unclassified	root	N/A	27.10 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	47.66 %
Unclassified	root	N/A	27.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.10 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	19.63 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.95 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.10 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	19.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.95 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.10 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.95 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.87 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.95 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	8.41 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.87 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.93 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.95 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.61 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.87 %
Acidobacteriaceae bacterium TAA 166	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	0.93 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10054655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1325	Open in IMG/M
3300004152\|Ga0062386_100377145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1139	Open in IMG/M
3300005435\|Ga0070714_100200899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1823	Open in IMG/M
3300005543\|Ga0070672_100503034	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1048	Open in IMG/M
3300005602\|Ga0070762_10522288	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	780	Open in IMG/M
3300005888\|Ga0075289_1042706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	698	Open in IMG/M
3300005921\|Ga0070766_10453233	Not Available	847	Open in IMG/M
3300006059\|Ga0075017_100247707	Not Available	1302	Open in IMG/M
3300006059\|Ga0075017_100455149	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300006162\|Ga0075030_100690608	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	808	Open in IMG/M
3300006354\|Ga0075021_10821257	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	601	Open in IMG/M
3300009012\|Ga0066710_101997410	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300009038\|Ga0099829_10441459	All Organisms → cellular organisms → Bacteria → Acidobacteria	1078	Open in IMG/M
3300009623\|Ga0116133_1175199	Not Available	569	Open in IMG/M
3300009638\|Ga0116113_1018697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1515	Open in IMG/M
3300009638\|Ga0116113_1203107	Not Available	513	Open in IMG/M
3300009639\|Ga0116122_1140965	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300009660\|Ga0105854_1101596	Not Available	898	Open in IMG/M
3300009672\|Ga0116215_1453500	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300010320\|Ga0134109_10412641	Not Available	542	Open in IMG/M
3300010360\|Ga0126372_10033073	Not Available	3280	Open in IMG/M
3300010366\|Ga0126379_12972699	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300010376\|Ga0126381_101238665	Not Available	1078	Open in IMG/M
3300010376\|Ga0126381_103885526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	583	Open in IMG/M
3300010379\|Ga0136449_101721089	Not Available	943	Open in IMG/M
3300010379\|Ga0136449_102796908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300010396\|Ga0134126_10064766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4546	Open in IMG/M
3300011119\|Ga0105246_10289647	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300011270\|Ga0137391_10899691	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300012210\|Ga0137378_11643485	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300012363\|Ga0137390_11650391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300012917\|Ga0137395_10509561	Not Available	867	Open in IMG/M
3300012923\|Ga0137359_11490736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300012925\|Ga0137419_10750089	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300012929\|Ga0137404_10097081	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300012929\|Ga0137404_11437983	Not Available	637	Open in IMG/M
3300012989\|Ga0164305_11617011	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300013296\|Ga0157374_10564872	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300013297\|Ga0157378_10628528	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300014151\|Ga0181539_1068859	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1579	Open in IMG/M
3300014155\|Ga0181524_10263511	Not Available	803	Open in IMG/M
3300014158\|Ga0181521_10284669	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300014165\|Ga0181523_10398185	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300014167\|Ga0181528_10346476	Not Available	806	Open in IMG/M
3300014200\|Ga0181526_10296483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1030	Open in IMG/M
3300015372\|Ga0132256_100231305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1909	Open in IMG/M
3300017929\|Ga0187849_1352374	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300017930\|Ga0187825_10169029	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300017935\|Ga0187848_10479225	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300017943\|Ga0187819_10428940	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300017973\|Ga0187780_11339053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	527	Open in IMG/M
3300017995\|Ga0187816_10415958	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300018012\|Ga0187810_10205321	Not Available	802	Open in IMG/M
3300018057\|Ga0187858_10710284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	599	Open in IMG/M
3300018090\|Ga0187770_11162716	Not Available	623	Open in IMG/M
3300019284\|Ga0187797_1854242	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300020579\|Ga0210407_10654876	Not Available	816	Open in IMG/M
3300020582\|Ga0210395_11288873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300021171\|Ga0210405_10372989	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300021406\|Ga0210386_10014780	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6094	Open in IMG/M
3300021420\|Ga0210394_10915719	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300024227\|Ga0228598_1051290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300024271\|Ga0224564_1116167	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300025812\|Ga0208457_1095457	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300025909\|Ga0207705_10071709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2511	Open in IMG/M
3300025922\|Ga0207646_10300679	Not Available	1450	Open in IMG/M
3300025923\|Ga0207681_11389681	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300025944\|Ga0207661_10341592	Not Available	1349	Open in IMG/M
3300025945\|Ga0207679_11047733	Not Available	748	Open in IMG/M
3300025986\|Ga0207658_10697765	Not Available	917	Open in IMG/M
3300025986\|Ga0207658_12124090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300026088\|Ga0207641_10636337	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300026142\|Ga0207698_11760250	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300026294\|Ga0209839_10179888	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300026514\|Ga0257168_1096856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300026538\|Ga0209056_10029111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5240	Open in IMG/M
3300027432\|Ga0209421_1058911	Not Available	769	Open in IMG/M
3300027497\|Ga0208199_1027946	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300027610\|Ga0209528_1130348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300027635\|Ga0209625_1072271	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300027729\|Ga0209248_10067903	Not Available	1084	Open in IMG/M
3300027803\|Ga0209910_10052738	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300027825\|Ga0209039_10301758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300027894\|Ga0209068_10636025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300027898\|Ga0209067_10261845	Not Available	943	Open in IMG/M
3300028665\|Ga0302160_10021338	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300028678\|Ga0302165_10031843	Not Available	1413	Open in IMG/M
3300028747\|Ga0302219_10268673	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300028788\|Ga0302189_10411088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300028873\|Ga0302197_10411662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300029918\|Ga0302143_1186542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300029954\|Ga0311331_10082678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4212	Open in IMG/M
3300029954\|Ga0311331_10311758	Not Available	1666	Open in IMG/M
3300030019\|Ga0311348_10388070	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300030058\|Ga0302179_10034191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2354	Open in IMG/M
3300030494\|Ga0310037_10263894	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300031234\|Ga0302325_12114608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300031247\|Ga0265340_10224669	Not Available	841	Open in IMG/M
3300031249\|Ga0265339_10052750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2214	Open in IMG/M
3300031708\|Ga0310686_109533643	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300031718\|Ga0307474_10642148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	837	Open in IMG/M
3300031820\|Ga0307473_10213248	Not Available	1156	Open in IMG/M
3300032174\|Ga0307470_10438471	Not Available	936	Open in IMG/M
3300032828\|Ga0335080_10001830	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21188	Open in IMG/M
3300032892\|Ga0335081_11114103	Not Available	908	Open in IMG/M
3300033433\|Ga0326726_12118900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300034090\|Ga0326723_0104568	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.98%
Host-Associated	Host-Associated	14.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.75%
Aquatic	Environmental → Aquatic	25.23%
Plants	Host-Associated → Plants	14.02%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.60%
Freshwater	Environmental → Aquatic → Freshwater	19.63%
Peat	Environmental → Terrestrial → Peat	12.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.15%
Sediment	Environmental → Aquatic → Sediment	5.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.15%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.41%
Loam	Environmental → Terrestrial → Soil → Loam	7.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.15%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.87%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.67%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.80%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.87%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.93%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027803	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3S	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028665	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3	Environmental	Open in IMG/M
3300028678	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_2	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100546552	3300002558	Grasslands Soil	IKQDKDSTREFYNRMVPFKTALTGTIDAPANAYPLLSTLAKWAKTASEK*
Ga0062386_1003771452	3300004152	Bog Forest Soil	EFYGRMVPFKTSLQGEIEAPKAAYSFLSSLAKWAQEAAK*
Ga0070714_1002008993	3300005435	Agricultural Soil	TSTREFYGRMVPFRTSLTGEIQSPEGGRPLLVSLSKFATEAAK*
Ga0070672_1005030341	3300005543	Miscanthus Rhizosphere	STREFYARMVPFKTALTGTIPAPDSAYPFLNTLSKWATKAASK*
Ga0070762_105222882	3300005602	Soil	RDFYGRMVPFKTSLKGEVEAPKASYPFLSTLAKWAQVAAK*
Ga0075289_10427063	3300005888	Rice Paddy Soil	SSTREFYGRMVPFKTALKAQIAAPDEAFPFLNALAKWAVVAAQG*
Ga0070766_104532332	3300005921	Soil	GRMVPFKTSLKGTIDPPANAFPFLNTLAKWAKTAAASK*
Ga0075017_1002477072	3300006059	Watersheds	GRMVPFKTSLKGEVEAPKSAYPFLSPLAKWAQVASK*
Ga0075017_1004551493	3300006059	Watersheds	STREFYGRMVPFKTALKGDIEAPKAAYPFLSTLAKWAQQASK*
Ga0075030_1006906082	3300006162	Watersheds	KDSTREFYGRMVPFRTALKGEIETPKAAYPFLSTLAKWAQQASK*
Ga0075021_108212572	3300006354	Watersheds	FYNRMVPFKTSLTGTIEPPPNAYPFLSTLAKWAKTAATK*
Ga0066710_1019974101	3300009012	Grasslands Soil	TREFYNRMVPFKTSLTGTIDAPQGAYPFLNVLAKWAKTAAAK
Ga0099829_104414594	3300009038	Vadose Zone Soil	REFYGRMVPFKTSLTGEIETPKAAYPFLSTLAKWAQQASK*
Ga0116133_11751991	3300009623	Peatland	YGRMVPFKTSLTGEIDAPKGAYPFLSTLAKWAQIASR*
Ga0116113_10186972	3300009638	Peatland	RMVPFKTSLKGEVDAPKDAYPFLSSLAKWAVEAAK*
Ga0116113_12031072	3300009638	Peatland	DSTREFYGRMVPFKTSLTGEIDAPKGAYPFLSTLAKWAQIASR*
Ga0116122_11409651	3300009639	Peatland	MVPFKTSLKGDIEAPQAAYPFLSTLAKWAQEAAK*
Ga0105854_11015961	3300009660	Permafrost Soil	MVPFKTSLKGTIPPPPDANVFLTTLAKWAQVAAK*
Ga0116215_14535001	3300009672	Peatlands Soil	NGAVIKQDEASTREFYGSMVPFKTSLKGEIDPPKPSLPFLDTLAKWAKNAG*
Ga0134109_104126411	3300010320	Grasslands Soil	VPFKTALTGTIDAPANAYPLLSTLARWAKTASEK*
Ga0126372_100330734	3300010360	Tropical Forest Soil	MVPFKTSLQGNIEAPKNAYPFLNTLAKWAQEAAKK*
Ga0126379_129726991	3300010366	Tropical Forest Soil	MVPFKTSLTGEIEPPQGAYPFLSVLAKWAKVAADK*
Ga0126381_1012386651	3300010376	Tropical Forest Soil	STREFYGRMVPFKTSLSGEIEAPGTAYPFLSTLAKWAKTAANK*
Ga0126381_1038855261	3300010376	Tropical Forest Soil	STREFYGRMVPFKTSLSGEIEAPGTAYPFLSTLAKWAKTAADK*
Ga0136449_1017210891	3300010379	Peatlands Soil	ESTREFYGRMVPFPTSLKGEIEAPKDAYPFLSTLAKWALQAAK*
Ga0136449_1027969082	3300010379	Peatlands Soil	EFYGRMVPFKTSLKGEIDAPKDAYPFLSTLAKWALQAAK*
Ga0134126_100647667	3300010396	Terrestrial Soil	FYGRMVPFRTSLKGTIDAPPNAYPFLNTLAKWAKTAATK*
Ga0105246_102896471	3300011119	Miscanthus Rhizosphere	KDSTREFYGRLVPFKTSLTGSIDAPANAYPFLNTLAKWAKTAATK*
Ga0137391_108996912	3300011270	Vadose Zone Soil	RMVPFKTSLTGEVDPPAGANTFLTALAKWAQEASK*
Ga0137378_116434852	3300012210	Vadose Zone Soil	YGRMVPFKTSLTGTIDAPAGAYPFLSVLAKWAKTASEK*
Ga0137390_116503912	3300012363	Vadose Zone Soil	FYGRMVPFKTSLKGEIEAPKAAYPFLSTLAKWAQQASK*
Ga0137395_105095612	3300012917	Vadose Zone Soil	IVPFKTSLTGTIGPPSNAYPFLNTLAKWAKTAAAAK*
Ga0137359_114907362	3300012923	Vadose Zone Soil	RDFYGRMVPFKTSLEGNIEAPQAAFPFLNTLAKWAKAAEGK*
Ga0137419_107500892	3300012925	Vadose Zone Soil	FYGRMVPFKTSLTGTIDPPPNAYPLLNTLAKWAKTAATAK*
Ga0137404_100970814	3300012929	Vadose Zone Soil	YGRMVPFRTSLTGKVEAPQGAYPFLNTLAKWAKKAADK*
Ga0137404_114379832	3300012929	Vadose Zone Soil	MVPFKTSLQGTIDAPDTAYPFLSTLAKWAKAAASK*
Ga0164305_116170112	3300012989	Soil	KDATREFYERMVPFKTSLTGNVEAPAAANSFLTTLAHWAQSAAKK*
Ga0157374_105648721	3300013296	Miscanthus Rhizosphere	FYGRMVPFKTSLSGTIDAPENARPLLETIAKWAKTSADK*
Ga0157378_106285282	3300013297	Miscanthus Rhizosphere	RMVPFKTSLQGTIPAPDAAYPFLSTLAKWAKEAAKK*
Ga0181539_10688593	3300014151	Bog	FYGHMVPSKTALKGEIEAPKAAYPFLNTLAKWAQQAAK*
Ga0181524_102635112	3300014155	Bog	YGHMVPSKTALKGEIEAPKAAYPFLNTLAKWAQQAAK*
Ga0181521_102846691	3300014158	Bog	TREFYGRMVPFKTSLKGEVEAPKAAYPFLSTLAKWAQQAAK*
Ga0181523_103981851	3300014165	Bog	GRMVPFKTSLVGEIDPPAGANAFLSSLAKWAQEAAK*
Ga0181528_103464761	3300014167	Bog	RDFYGRMVPFKTSLTGAVEAPKNAYPFLSSLAKWAQQASK*
Ga0181526_102964831	3300014200	Bog	DFYGRMVPFKTSLKGEVEAPKAAYPFLSTLAKWAQQASK*
Ga0132256_1002313051	3300015372	Arabidopsis Rhizosphere	ARMVPFKTALTGTIPAPDSAYPFLNTLSKWATKAASK*
Ga0187849_13523741	3300017929	Peatland	GSTREFYGRMVPFKTSLKGEIEAPKAAYPFLSTLAKWAQQAAK
Ga0187825_101690292	3300017930	Freshwater Sediment	YGRMVPFKTSLTGEIDAPAGANAFLTTLAKWAQEASK
Ga0187848_104792252	3300017935	Peatland	FYGRMVPFKTSLKVEVEAPKAAYPFLSTLAKWAQQASK
Ga0187819_104289402	3300017943	Freshwater Sediment	STREFYGSMVPFKTSLKGEIDPPKPSMPFLDTLAKWAKNAG
Ga0187780_113390531	3300017973	Tropical Peatland	RDFYGRMVPFKTSLKGDIEAPKDAYPFLNTRAKWAQIASK
Ga0187816_104159582	3300017995	Freshwater Sediment	DFYGRMVPFKTSLKGEIEAPKSAYPFLSTLAKWAQAASK
Ga0187810_102053211	3300018012	Freshwater Sediment	STRDFYGRMVPFKTSLTGEIDAPKSAYPFLSTLAKWAQQASK
Ga0187858_107102842	3300018057	Peatland	FYGRMVPFKTSLKGDIEAPKDAYPFLSTLAKWAQEAAK
Ga0187770_111627161	3300018090	Tropical Peatland	KNATRDFYGHMVLSKTSLQGQIEAPKEAYPFLETLAKWAKAAAGK
Ga0187797_18542421	3300019284	Peatland	FYGRMVPFKTSLKGDIEAPNSAYPFLSSLAKWAQIAAK
Ga0210407_106548761	3300020579	Soil	EFFGRMVPFKTSLKGEIEAPKAAYPFLSTLAKWAQQASK
Ga0210395_112888731	3300020582	Soil	RMVPFRTSLIGEIDPPAGANAFLTSLAKWAQDAAK
Ga0210405_103729892	3300021171	Soil	YGRMVPFRTSLVGEIEPPPGANAFLTALAQWAQEAAK
Ga0210386_100147807	3300021406	Soil	MVPFKTSLTGEVEAPAGAFPFLNSLAKWAKSASSK
Ga0210394_109157191	3300021420	Soil	QDKDSTREFYGHMVPFDTALHGTIEAPKSAFPFLDTLAKWAKAAG
Ga0228598_10512902	3300024227	Rhizosphere	RMVPFRTSLTGEIDPPAGANAFLRTLAQWAQDAAK
Ga0224564_11161672	3300024271	Soil	DFYGRMVPFKTSLKGEVDAPKDAYPFLSSLAKWAQEAAK
Ga0208457_10954572	3300025812	Peatland	DKESTYEFYGRMVPFKTSLRGEIEAPKAAYPFLSTLAKWAQQAAK
Ga0207705_100717091	3300025909	Corn Rhizosphere	REFYGRMVPFKTALTGTIPAPDSAYPFLNTLSKWATKAASK
Ga0207646_103006793	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVPFKTSLEGSIDAPQTAYPFLNTLAKWGKAAEKK
Ga0207681_113896811	3300025923	Switchgrass Rhizosphere	TREFYARMVPFKTALTGTIPAPDSAYPFLNTLSKWATKAASK
Ga0207661_103415921	3300025944	Corn Rhizosphere	REFYARMVPFKTALTGTIPAPDSAYPFLNTLSKWATKAASK
Ga0207679_110477331	3300025945	Corn Rhizosphere	MVPFKTSLTGSIDAPANAYPFLNTLAKWAKTAATK
Ga0207658_106977652	3300025986	Switchgrass Rhizosphere	GRMVPFKTSLQGTIDPPDTAYPFLSTLAKWAKEAASK
Ga0207658_121240901	3300025986	Switchgrass Rhizosphere	RMVPFKTSLTGTIEAPKNAYPFLNTLAKWAKNAASK
Ga0207641_106363372	3300026088	Switchgrass Rhizosphere	MVPFRTSLKGTIDAPPNAYPFLNTLAKWAKTAATK
Ga0207698_117602502	3300026142	Corn Rhizosphere	GRMVPFRTSLQGTVDAPAGAYPFLQTLSKWAKVAAK
Ga0209839_101798882	3300026294	Soil	GHNVTFRNSLKGNIEAPKASYPFLDTLAKWAKAAS
Ga0257168_10968562	3300026514	Soil	TREFFGRMVPFKTSLKGEIEAPKAAYPFLSTLAKWAQQASK
Ga0209056_100291116	3300026538	Soil	YGRMVPFRTALTGEIEPPAAANPFLSTLAKWAQEAAK
Ga0209421_10589111	3300027432	Forest Soil	STREFYGRMVPFRTSLQETIEAPKAAYPFLSTLAKWAKTASQ
Ga0208199_10279462	3300027497	Peatlands Soil	REFYGRMVPFPTSLKGEIEAPKDAYPFLSTLAKWALQAAK
Ga0209528_11303482	3300027610	Forest Soil	REFYGRMVPFKTALTGEIDPPAGSNVFLMGLAQWAQAAAK
Ga0209625_10722711	3300027635	Forest Soil	YGRMVPFKTALTGEIDPPAGSNVFLMGLAQWAQAAAK
Ga0209248_100679031	3300027729	Bog Forest Soil	YGRMVPFKTSLKGEVDAPKDAYPFLSSLAKWAQEAAK
Ga0209910_100527381	3300027803	Thawing Permafrost	GRMVPFKTALKGEIDAPKDAYPFLSTLAKWAQQAAK
Ga0209039_103017582	3300027825	Bog Forest Soil	GRMVPFKTSLKGDIETPKAAYPFLSTLAKWAQEAAK
Ga0209068_106360252	3300027894	Watersheds	SQDKDATRQFYNRMVPFKTSLTGTIEPPPNAYPFLSTLAKWAKTAATK
Ga0209067_102618452	3300027898	Watersheds	KDSTREFYGRMVPFKTALKGDIEAPKAAYPFLSTLAKWAQQAAK
Ga0302160_100213381	3300028665	Fen	RMVPFKTSLKGEVEAPKMAYPFLSSLAKWAQQAAK
Ga0302165_100318431	3300028678	Fen	RDFYSRMVPFRTSLQGNIDAPQAAYPFLSTLAKWAKSAESK
Ga0302219_102686731	3300028747	Palsa	FYGHMVPFKTSLKGEIEAPQAAYPFLSTLAKWAQQASK
Ga0302189_104110882	3300028788	Bog	FYGRMVPFKTSLTGEIEAPPVANSFLTTLAKWAQEAAK
Ga0302197_104116621	3300028873	Bog	GRMVPFKTSLTGAVEAPKNAYPFLSSLAKWAQQASK
Ga0302143_11865421	3300029918	Bog	YGRMVPFKTSLTGEIEAPPVANSFLTTLAKWAQEAAK
Ga0311331_100826786	3300029954	Bog	STRDFYGRMVPFKTSLTGAVEAPKNAYPFLSSLAKWAQQASK
Ga0311331_103117583	3300029954	Bog	REFYGRMVPFRTSLVGEIDAPAGANAFLTSLAKWAQEAAK
Ga0311348_103880701	3300030019	Fen	FYGRMVPFKTSLKGEVEAPKMAYPFLSSLAKWAQQAAK
Ga0302179_100341911	3300030058	Palsa	KQDKDSTREFYGHMVPFKTSLKGEIEAPQAAYPFLSTLAKWAQQASK
Ga0310037_102638942	3300030494	Peatlands Soil	FYGRMVPFNTSLKGTIEAPKTAYPFLDTLAKWAKASS
Ga0302325_121146081	3300031234	Palsa	EFYGHMVPFDTSLHSTIDTPKTAYPFLDTLAKWAKAVS
Ga0265340_102246692	3300031247	Rhizosphere	YEFYGHLVPFKTALKGQIEAPKAAYPFLGTLAKFAQHAAREKE
Ga0265339_100527501	3300031249	Rhizosphere	KDSTRDFYGHMVPFKTSLKGEVEAPKAAYPFLSTLAKWAQQAAK
Ga0310686_1095336433	3300031708	Soil	REFYGRMVPFKTSLKGEVDAPKTAYPFLSTLAKWAQVASK
Ga0307474_106421482	3300031718	Hardwood Forest Soil	KQDKDSTREFYGHMVPFKTSLKGEIEAPQASYPFLSTLAKWAQQAAK
Ga0307473_102132481	3300031820	Hardwood Forest Soil	GRMVPFKTSLEGNIEAPQAAYPFLNTLAKWAKAAEGK
Ga0307470_104384712	3300032174	Hardwood Forest Soil	GRMVPFRTSLTGEIEAPAGAHEFLSSLAQWAQEAAK
Ga0335080_100018301	3300032828	Soil	FYGRMVPFKTALTGTIDAPKEAYPLLDTLAKWAKAAAAK
Ga0335081_111141032	3300032892	Soil	REFYGRMVPFKTSLQGDIEAPKSAYPFLSSLAKWAKAAEK
Ga0326726_121189001	3300033433	Peat Soil	RMVPFKTSLTGTIDAPANAYPFLSTLAKWAKTAAEK
Ga0326723_0104568_1099_1206	3300034090	Peat Soil	MVPFKTSLTGTIDAPANAYPFLNTLAKWAKTAATK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092166

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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