Metagenome / Metatranscriptome Family F092165

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092165
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	59 residues
Representative Sequence	MRSRKILPAILVLSAMPIAATAQQPTTVSEVVDKIVRQEQAEVQLLRQYSPLVETY
Number of Associated Samples	91
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.23 %
% of genes near scaffold ends (potentially truncated)	97.20 %
% of genes from short scaffolds (< 2000 bps)	94.39 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.701 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.299 % of family members)
Environment Ontology (ENVO)	Unclassified (28.037 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.336 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 38.10% β-sheet: 0.00% Coil/Unstructured: 61.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF07238	PilZ	9.35
PF01740	STAS	5.61
PF07228	SpoIIE	3.74
PF15919	HicB_lk_antitox	3.74
PF05973	Gp49	3.74
PF11848	DUF3368	1.87
PF03734	YkuD	0.93
PF13185	GAF_2	0.93
PF00487	FA_desaturase	0.93
PF13304	AAA_21	0.93
PF00144	Beta-lactamase	0.93
PF13744	HTH_37	0.93
PF08308	PEGA	0.93
PF04264	YceI	0.93
PF07978	NIPSNAP	0.93
PF00135	COesterase	0.93
PF03544	TonB_C	0.93
PF00174	Oxidored_molyb	0.93
PF01177	Asp_Glu_race	0.93
PF00196	GerE	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	3.74
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	3.74
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.93
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.93
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.93
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.93
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.93
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.93
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.93
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.93
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.70 %
Unclassified	root	N/A	24.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.70 %
Unclassified	root	N/A	24.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.70 %
Unclassified	root	N/A	24.30 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	58.88 %
Unclassified	root	N/A	24.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	36.45 %
Unclassified	root	N/A	24.30 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.58 %
Unclassified	root	N/A	24.30 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.74 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.93 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.58 %
Unclassified	root	N/A	24.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.74 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.93 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.93 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.58 %
Unclassified	root	N/A	24.30 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.93 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.93 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.93 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.58 %
Unclassified	root	N/A	24.30 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.93 %
Acidobacteriaceae bacterium KBS 146	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 146	0.93 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.93 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.58 %
Unclassified	root	N/A	24.30 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.93 %
Acidobacteriaceae bacterium KBS 146	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 146	0.93 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.93 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002914\|JGI25617J43924_10037360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1747	Open in IMG/M
3300002914\|JGI25617J43924_10295669	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300003367\|JGI26338J50219_1007104	Not Available	890	Open in IMG/M
3300005177\|Ga0066690_10305825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	1074	Open in IMG/M
3300005186\|Ga0066676_10424019	Not Available	899	Open in IMG/M
3300005454\|Ga0066687_10786431	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 146	566	Open in IMG/M
3300005557\|Ga0066704_10315860	Not Available	1053	Open in IMG/M
3300005559\|Ga0066700_10090877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1980	Open in IMG/M
3300005566\|Ga0066693_10174207	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	819	Open in IMG/M
3300005569\|Ga0066705_10212070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1216	Open in IMG/M
3300005921\|Ga0070766_10348138	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300006032\|Ga0066696_10371740	Not Available	932	Open in IMG/M
3300006354\|Ga0075021_10836420	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300006796\|Ga0066665_10289927	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300006797\|Ga0066659_10167044	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300009038\|Ga0099829_11734826	Not Available	512	Open in IMG/M
3300009088\|Ga0099830_10506134	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300009088\|Ga0099830_11575820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300009089\|Ga0099828_11595129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300010047\|Ga0126382_10059061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2292	Open in IMG/M
3300010048\|Ga0126373_10293176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1619	Open in IMG/M
3300010322\|Ga0134084_10137365	Not Available	812	Open in IMG/M
3300010322\|Ga0134084_10476810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300010358\|Ga0126370_10242120	Not Available	1393	Open in IMG/M
3300010360\|Ga0126372_10016335	Not Available	4212	Open in IMG/M
3300010361\|Ga0126378_11095026	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300010366\|Ga0126379_10842117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300010398\|Ga0126383_13179391	Not Available	536	Open in IMG/M
3300011269\|Ga0137392_10913050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300011269\|Ga0137392_11157407	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300011270\|Ga0137391_10732752	Not Available	819	Open in IMG/M
3300011270\|Ga0137391_11480984	Not Available	524	Open in IMG/M
3300011270\|Ga0137391_11573869	Not Available	501	Open in IMG/M
3300012096\|Ga0137389_10043988	All Organisms → cellular organisms → Bacteria	3333	Open in IMG/M
3300012096\|Ga0137389_11299689	Not Available	621	Open in IMG/M
3300012189\|Ga0137388_11453148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300012199\|Ga0137383_10306856	All Organisms → cellular organisms → Bacteria → Acidobacteria	1162	Open in IMG/M
3300012203\|Ga0137399_10567516	All Organisms → cellular organisms → Bacteria → Acidobacteria	953	Open in IMG/M
3300012205\|Ga0137362_10197036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1733	Open in IMG/M
3300012207\|Ga0137381_11541177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300012211\|Ga0137377_11910211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300012357\|Ga0137384_10729630	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300012361\|Ga0137360_11468807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300012362\|Ga0137361_11478529	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300012363\|Ga0137390_10702246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	974	Open in IMG/M
3300012363\|Ga0137390_10812346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300012683\|Ga0137398_10761455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300012918\|Ga0137396_10331589	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300012924\|Ga0137413_11325822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300012927\|Ga0137416_11930395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300016270\|Ga0182036_10927882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300016319\|Ga0182033_10412917	Not Available	1143	Open in IMG/M
3300016341\|Ga0182035_11156826	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300016357\|Ga0182032_10137089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1791	Open in IMG/M
3300016357\|Ga0182032_10487447	All Organisms → cellular organisms → Bacteria → Acidobacteria	1012	Open in IMG/M
3300016357\|Ga0182032_11477506	Not Available	590	Open in IMG/M
3300016387\|Ga0182040_10264860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1298	Open in IMG/M
3300017930\|Ga0187825_10361970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300017933\|Ga0187801_10115688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1026	Open in IMG/M
3300017936\|Ga0187821_10067344	All Organisms → cellular organisms → Bacteria → Acidobacteria	1295	Open in IMG/M
3300017973\|Ga0187780_11136114	Not Available	571	Open in IMG/M
3300017995\|Ga0187816_10095057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1277	Open in IMG/M
3300018012\|Ga0187810_10239488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300018088\|Ga0187771_11825952	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300020581\|Ga0210399_10849848	Not Available	743	Open in IMG/M
3300021046\|Ga0215015_10005988	All Organisms → cellular organisms → Bacteria → Acidobacteria	993	Open in IMG/M
3300021088\|Ga0210404_10445701	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300021560\|Ga0126371_11812326	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300026316\|Ga0209155_1023475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2560	Open in IMG/M
3300026335\|Ga0209804_1089403	All Organisms → cellular organisms → Bacteria → Proteobacteria	1431	Open in IMG/M
3300026335\|Ga0209804_1117464	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300026530\|Ga0209807_1153428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300026538\|Ga0209056_10396831	Not Available	853	Open in IMG/M
3300026540\|Ga0209376_1313179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300026551\|Ga0209648_10744026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300026928\|Ga0207779_1007330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1590	Open in IMG/M
3300026979\|Ga0207817_1011467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300027562\|Ga0209735_1032081	Not Available	1103	Open in IMG/M
3300027795\|Ga0209139_10075240	All Organisms → cellular organisms → Bacteria → Acidobacteria	1184	Open in IMG/M
3300027812\|Ga0209656_10548606	Not Available	500	Open in IMG/M
3300029636\|Ga0222749_10526009	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031544\|Ga0318534_10528172	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300031573\|Ga0310915_10722964	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300031719\|Ga0306917_10848812	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300031724\|Ga0318500_10352258	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300031753\|Ga0307477_10480385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300031754\|Ga0307475_10468130	Not Available	1012	Open in IMG/M
3300031770\|Ga0318521_10394665	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300031770\|Ga0318521_10673687	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300031833\|Ga0310917_10463380	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300031879\|Ga0306919_10337563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1149	Open in IMG/M
3300031879\|Ga0306919_10972509	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300031890\|Ga0306925_11938891	Not Available	558	Open in IMG/M
3300031897\|Ga0318520_10197595	Not Available	1185	Open in IMG/M
3300031897\|Ga0318520_10427234	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300031941\|Ga0310912_11506432	Not Available	506	Open in IMG/M
3300031942\|Ga0310916_11164794	Not Available	638	Open in IMG/M
3300031946\|Ga0310910_10302565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1258	Open in IMG/M
3300031947\|Ga0310909_11251530	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300031954\|Ga0306926_10101874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3521	Open in IMG/M
3300032044\|Ga0318558_10608155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300032063\|Ga0318504_10345067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300032094\|Ga0318540_10138325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163	Open in IMG/M
3300032094\|Ga0318540_10360188	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300032094\|Ga0318540_10558140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300032261\|Ga0306920_100483533	All Organisms → cellular organisms → Bacteria	1838	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.59%
Aquatic	Environmental → Aquatic	8.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.59%
Freshwater	Environmental → Aquatic → Freshwater	7.48%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.05%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.48%
Loam	Environmental → Terrestrial → Soil → Loam	4.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.41%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003367	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026928	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 44 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25617J43924_100373601	3300002914	Grasslands Soil	MRSLKTLYAILTLTAMPIAATAQQPLTESEVVDKIVRQEQAEVQLLRQYSPLVETYIQNI
JGI25617J43924_102956692	3300002914	Grasslands Soil	MRSLKILYAILTLTAMPIAATAQQPMTESEVVDKIVRQEQAEVQLLRQYSPLVETYIQNI
JGI26338J50219_10071041	3300003367	Bog Forest Soil	MRSLKILLVILVLSATPLITTAQQPASLNEVVDKIVAQEQVEVQL
Ga0066690_103058253	3300005177	Soil	MRSRKILPAILALSAMSIAARAQQPTTVSEVVDKVVRQEQAEVELLRQYSP
Ga0066676_104240191	3300005186	Soil	MRSRKILPAILALSAMPIAATAQEPTTVSDVVDKVVRQEQAEMELLRQYSPLVE
Ga0066687_107864311	3300005454	Soil	MRSLKILPAALALSAMPLGATAQQLEGTNQVVDRIVAQERAEVQLLRQYAPLVETYI
Ga0066704_103158604	3300005557	Soil	MRSLKILPAALALSAMPLGATAQQLEGTNQVVDRIVAQERAEVQLLRQYAPLVETYIQ
Ga0066700_100908771	3300005559	Soil	MRSRKILPAILALSAMSIAARAQQPTTVSEVVDKVVRQEQAEVELLRQYSPLVE
Ga0066693_101742073	3300005566	Soil	MRSLKILPAALALSAMPLGATAQQLEGTNQVVDRIVAQERAEVQLLRQYAPLVETYIQYLLP
Ga0066705_102120702	3300005569	Soil	MCSLRTLLAAIALGVLPLVTSAQQLTSAIEVVDNIVAQEQGEVQLLRQYAPLVETYIQYQ
Ga0070766_103481381	3300005921	Soil	MQSLKILRATLVLGAMVVAMPLAANAQQPLTESEVVDKIVAQEQVEVQLLRQYSPLVETYIQNL
Ga0066696_103717403	3300006032	Soil	MRRLKILPAILMLLAILILLTMPIAAAAQQPTTVSEVVDKVVRQEQAEVQLLRQYSPLVE
Ga0075021_108364201	3300006354	Watersheds	MKILPLALAFSAWPLPATAQQQTTMSQVVDKIVAQEQVEMQMLRQYSPLVETYIQNLR
Ga0066665_102899273	3300006796	Soil	MRSRKILPAILALSAMSIAARAQQPPTVSEVVDKVVRQEQAEVELLRQYSPLVETYIQNL
Ga0066659_101670441	3300006797	Soil	MRSRKILPAILALSAMSIAARAQQPTTVSEVVDKVVRQEQAEVELLRQYSPL
Ga0099829_117348261	3300009038	Vadose Zone Soil	MRSLKILRAILTLLAILILLAMPMAVTAQQPTTVSAVVDKIVAQEQVEVQLLRQY
Ga0099830_105061341	3300009088	Vadose Zone Soil	MRSLKTLYAILTLTAMPIAAAAQQPMTESEVVDKIVRQEQAEVQLLRQYSP
Ga0099830_115758202	3300009088	Vadose Zone Soil	MRSLKILPAILLLGAMPIAATAQQPATLSEVVDKIVSQEQVEVQLLRQYSPLVETYIQNIRPDK
Ga0099828_115951291	3300009089	Vadose Zone Soil	MRSRKILPAILVFSAMPIATAAQQPPAVSEVVDKIVRQEQVEVQYLRQFSPLVETYIQNLRPDKQLG
Ga0126382_100590611	3300010047	Tropical Forest Soil	MYSLKILPAVLALIAMPLAASAQQPASPNEVVDKIVAQEHAEVQLLRQYAPMVETYI
Ga0126373_102931763	3300010048	Tropical Forest Soil	MEMNMFSLKFLPLVLAFSVVPPAATAQQPMVLNEIVDKIAAREQAEMQLLRRYSPLVETYIQYVRADQHFG
Ga0134084_101373651	3300010322	Grasslands Soil	MRSLKILPTALALSAMPLGATAQQLEGTNQVVDRIVAQERAEVQLLRQYAPLVETYIQYLLPDKEKE
Ga0134084_104768102	3300010322	Grasslands Soil	MRRLKILPAILMLLAILILLTMPIAAAAQQPTTVSEVVDKVVRQEQAEVQLLRQYSPLVETYIQNRR
Ga0126370_102421203	3300010358	Tropical Forest Soil	MHSLKILTAALALIVISSATPAQQPANANEVVDKIVAQEHAEVELLRKYTPLV*
Ga0126372_100163351	3300010360	Tropical Forest Soil	MRSLKLLSVAVAYGVMPLAASAQQPMVLPEVVDKIMTQEHREMQLLRQYSP
Ga0126378_110950262	3300010361	Tropical Forest Soil	MRSLKILSAALFLGTLPLLATAQLPLSPSDAIDKIIAQEQAEVGLLRQYSPLVETYIQYLRPDRQL
Ga0126379_108421172	3300010366	Tropical Forest Soil	MLLAALVLSAMPLTAAAQQLRSPSEVVVDKIVAQERAEVQLLRQYSPLVETYIQYLRSDE
Ga0126381_1016832252	3300010376	Tropical Forest Soil	MFSLKILPVALAISAAPLITTGQQLATPNEIVDKLVAQEQVEMQLLRQYSPLV
Ga0126383_131793911	3300010398	Tropical Forest Soil	MRSLKILSAALFLGTLPLLATAQQPLSPSDAIDKIIAQEQAEVGLLRQYSPLV
Ga0137392_109130502	3300011269	Vadose Zone Soil	MRSLKILYAVLTLTAMPIAATAQQPMTESEVVDKIVRQEQAEVQLLRQYSPLVETYI
Ga0137392_111574072	3300011269	Vadose Zone Soil	MRSLKILPAILVLGAMPITAAAQQPATLSEVVDKIVRQEQAEVQLLRQYSPLVETYIQNIRA
Ga0137391_107327521	3300011270	Vadose Zone Soil	MRSLKILPAILVLGAMPVDAAAQQPATVSEVVEKIVRQEQAEVQLLRQYSPLVETYIQNIRAD
Ga0137391_114809841	3300011270	Vadose Zone Soil	MRSFKILPAALVLATVPLAARAQQPPTLSEVIDKIVSQEQVEVQSLRQYSPLVET
Ga0137391_115738691	3300011270	Vadose Zone Soil	MRSFKILPATLVLATVPLAARAQQPPTLSEVIDKIVSQEQVEVQSLRQYSPLVET
Ga0137389_100439887	3300012096	Vadose Zone Soil	MRSLKILPAILVLGAMPVDAAAQQPATVSEVVDKIVRQEQVEVQLLRQYSP
Ga0137389_112996891	3300012096	Vadose Zone Soil	MRSFKILPAALVLATVPLAARAQQPPTLSEVIDKIVSQEQVEVQSLRQYSPLVEPYIQNLRADKELGAVP
Ga0137388_114531482	3300012189	Vadose Zone Soil	MRSLKILPAILVLSAMPIATAAQQPPTVSEVVDKIVRQEQVEVQYLRQYSPLVETYI
Ga0137383_103068561	3300012199	Vadose Zone Soil	MRSRKILPAILALSAMPIAATAQEPTTVSDVVDKVVRQEHAEMEMLRQYSPLVETYIQNLRAVKMVGRPP
Ga0137399_105675161	3300012203	Vadose Zone Soil	MRSLKILPAILVLSAVMPVPATAQQPTTVSEVIDKIVRQEQVEVQLLRQYSPLVETYIQN
Ga0137362_101970363	3300012205	Vadose Zone Soil	MRSFKILPATLVLATVPLAARAQQPPTLSEVIDKIVSQEQVEVQSLRQYSPLVETYIQNLRADKE
Ga0137381_115411771	3300012207	Vadose Zone Soil	MRSFKILPAALVLATVPLAARAQQPPTLSEVIDKIVSQEQVEVQSLRQYSPLVETYIQNLRADK
Ga0137377_119102111	3300012211	Vadose Zone Soil	MRSRKILYAVLTLTAMPIAVTAQQPMTESEVVDKIVRQEQAEVQLLRQYSPLVETYIQN
Ga0137384_107296301	3300012357	Vadose Zone Soil	MRGRKILPAILVLSAMPIAATAQQPTTVSEVVDKIVRQEQAEVQLLRQYSPLVET
Ga0137360_114688071	3300012361	Vadose Zone Soil	MRSFKILPAALVLATVPLAARAQQPPTLSEVIDKIVSQEQVEVQSLRQYSPLVETYIQNLRADKE
Ga0137361_114785292	3300012362	Vadose Zone Soil	MRSRKILPAILVLSAMPVATTAQQPMTVSEVVDKIVRQEQTEVQLLRQYSPLVETYIQNI
Ga0137390_107022462	3300012363	Vadose Zone Soil	MRSRKILPAILVFSAMPIATAAQQPPAVSEVVDKIVRQEQVEVQYLRQFSPLV
Ga0137390_108123462	3300012363	Vadose Zone Soil	MRSLKILYAVLTLTAMPIAATAQQPMTESEVVDKIVRQEQAEVQLLRQYSPLVETYIQNIRPDK
Ga0137398_107614552	3300012683	Vadose Zone Soil	MRSLKILYAVLTLTAMPIAVTAQQPMTESEVVDKIVRQEQAEVQLLRQYSPLVETYIQNI
Ga0137396_103315891	3300012918	Vadose Zone Soil	MRSLKILPAILLLSAMPVAATPQQPTTLGDVVDKIVAQEQVDAQLLRQYSPLV
Ga0137413_113258221	3300012924	Vadose Zone Soil	MRSLKTVYAILTLTAMPIAATAQQPMTESEVVDKIVRQEQAEVQLLRQYSPLVETYIQN
Ga0137416_119303951	3300012927	Vadose Zone Soil	MRSCKILPAILALSAMPIAATAQQPTTVGEVVDKVVRQEQAEMGLLRQYSPLVETYIQNLRADKQL
Ga0182036_109278821	3300016270	Soil	MNISSLKFLAVVLVLSVMPAAARAQQPMALNEVVDKIAAREHTEMQLLRRYSPLVETYIQYIR
Ga0182033_104129173	3300016319	Soil	MRSLKILPAALALSAIPTGATAQQLGIANQVVDRIVTQEQAEVQLLRQYSPLVETYIQYRLPD
Ga0182035_111568262	3300016341	Soil	MRSLKLLSVAVAYGVMALAASAQQPMVLPEVVDKIMTQEHREMQLLRQYSPLVESY
Ga0182032_101370891	3300016357	Soil	MRSLKLLSVAVAYGVMPLAASAQQPMVLPEVVNKIMTQEHREMQLLRQYSPLV
Ga0182032_104874471	3300016357	Soil	MLSLKFLPMVLAFSAMPLAASAQQPMVLNEVVDKIVAQEQTEMQLLRQYSPLV
Ga0182032_114775062	3300016357	Soil	MRSLKYLTLVLAFHVMPLAAATQQPTTMNEVVDRIVAQERAEMQLLRRY
Ga0182040_102648601	3300016387	Soil	MEMNMLSLKFLPLVLAFSVMPPAATAQQPMVLSEIVDKIAAREHAEMQLLRRYSPLVETYIQYVRADQHFGE
Ga0187825_103619701	3300017930	Freshwater Sediment	MRSLKTLPAALALSVMPLAATAQHVISPSEVVDKIVAQEQAEVRLLRQYSPLEETYIQYLRPDKQVGAVPDG
Ga0187801_101156881	3300017933	Freshwater Sediment	MRSLKYLTLVLAFNAMPLAATQQPTTVNEAVDRIVAQERVEIQLLRRYSPLVETYIQYLRPDKK
Ga0187821_100673441	3300017936	Freshwater Sediment	MRSLTILPVCVILGVMPMDATAQQPSTVTDVVDKIVRQEQVEVQLLRQY
Ga0187780_111361141	3300017973	Tropical Peatland	MRSLTCLTLALALSATPLAATQQPTTLSELVDKIAAQERAEIQLLRRYSPLVETYIQY
Ga0187816_100950572	3300017995	Freshwater Sediment	MRSLKCLLAALAFCTMPLAATAQQPTTENAVIDRILAQEHVEMHLLRQYSPLVETYIQY
Ga0187810_102394881	3300018012	Freshwater Sediment	MRSLKCLPLALAFSAMPLAATQQPTTLSEVVDKIVAQEHVEMQLLRQYSPLVETYIQ
Ga0187771_118259521	3300018088	Tropical Peatland	MRGLRCLFAVLAFSAMPILAAAQQPMTPSEVVNKIVTQEQVEMHLLRQYSPLVE
Ga0210399_108498482	3300020581	Soil	MQSLKILRATLVLGAMVVAMPLAANAQQALTESEVVDKIVAQEQVEVQL
Ga0215015_100059882	3300021046	Soil	MRSLKTLLAALSLSVLALAANAQQPTKPSEVIDKILMQEQVEVQLLRQYLSLIHI
Ga0210404_104457012	3300021088	Soil	MRSLKILPAILMLLAVLILLAMPMAVTAQQPTTPSEVVDKIVRQEQVEVQLLRQYSPLVETYIQNIRA
Ga0126371_118123262	3300021560	Tropical Forest Soil	MCGLKILAALALSAVPLGASAQQLESTTKVVDRIVAQEQAEVQLLRQYSPLVETYIQYLRPDKEAEAVANGDK
Ga0209155_10234751	3300026316	Soil	VRSRKILPAILTLSAMSIVARAQQPTTVSEVVDKVVRQEQAEVELLRQYSPLVETYIQN
Ga0209804_10894033	3300026335	Soil	MRSRKILPAILALSAMSIAARAQQPTTVSEVVDKVVRQEQAEVELLRQYSPLV
Ga0209804_11174641	3300026335	Soil	MRRLKILPAILILLAILILLTTPIAAAAQQPTTVSEVVDKVVRQEQAEV
Ga0209807_11534283	3300026530	Soil	MRSRKILPAILALSAMSIAARAQQPTTVSEVVDKVVRQEQAEVELLRQY
Ga0209056_103968312	3300026538	Soil	MRSLKILPAALALSAMPLGATAQQLEGTNHVLDRIVAQEQVEVQLLRQYSPLVETYIQYLLPDKDREAVPNG
Ga0209376_13131791	3300026540	Soil	MRSFKILPATLVLATVPLAALAQQPPTLSEVIDKIVSQEQVEVQSLRQYSPLVETYIQNL
Ga0209648_107440261	3300026551	Grasslands Soil	MRSRKILPAILVLSAMPIAATAQQPTTVSEVVDKIVRQEQAEVQLLRQYSPLVETY
Ga0207779_10073301	3300026928	Tropical Forest Soil	MRSLKFPSVALALSVLPLTATAQQPVVLGEVVDKIVARESTEMQLLRQYSPLVETYIQYVRPDKQSGAV
Ga0207817_10114672	3300026979	Tropical Forest Soil	MLSLKFLPVVLAFSVIPPAATAQQPRVLNEVVDKIAAQEHTEMELLRQYSPLVETYIQYIRA
Ga0209735_10320811	3300027562	Forest Soil	MRSLKVLPAILVLSAMPVAATAQQPTTLSEVVDKIVRQEQVEVQLLRQYSPLV
Ga0209139_100752401	3300027795	Bog Forest Soil	MRSLKILPIALLLSAMPLAATAQQPTNLSEVVDKIVTQEQVEVQLLRQYSPLVETYIQNLRP
Ga0209656_105486061	3300027812	Bog Forest Soil	MRSLKCVVLALTFSAMPLAATAQQPTVSEAVDKIFSQEQNEVRSLRQYAPLVETYIQYFR
Ga0222749_105260091	3300029636	Soil	MKILPLALAFGAWPFAATAQQQSTMSQVVDKIVAQEQVEMQMLRQYSPLVETYIQNL
Ga0318534_105281721	3300031544	Soil	MRSLKCLALALLFCAMSEAALEPPMTPNEMVDRIVAQEQVEMQLLRQYAPLVETYIQYV
Ga0310915_107229642	3300031573	Soil	MRSLKLLSVAVAYGVMALAASAQQPMVLPEVVDKIMTQEHREMQLLRQY
Ga0306917_108488121	3300031719	Soil	MRSLKLLSVAVAYGVMPLAAAQQPMVLPEVVDKIMTQEHREMQLLRQYSPLVETYIQYVRPD
Ga0318500_103522582	3300031724	Soil	MRSLKCLALALLFCSMSRAAAEAPMTPNEMVDRIVAQEQVEMQLLRQYAPLVETYI
Ga0307477_104803851	3300031753	Hardwood Forest Soil	MRSLKILPAILMLLAILILLAMPMAVTAQQPATVSEVVDKIVRQEQVEVQLL
Ga0307475_104681301	3300031754	Hardwood Forest Soil	MRSLKFLSLALAFGALPLTATAQQPTVLSEVVDKIVAQERAEVQLLRQYSPLVETYIQYLRPDK
Ga0318521_103946651	3300031770	Soil	MRSLKFLSVALALSVMPLTATAQQPMVLGEVVDKIVARESTEMQLLRQYSPLVETYIQYVRPDKQ
Ga0318521_106736871	3300031770	Soil	MRSLKFLSALALSLMPLTATAQQPMVLGEVVDKIVAQENTEMQLLRRYSPLVETYIQYV
Ga0310917_104633801	3300031833	Soil	MRSLKFLSALALSLMPLTATAQQPMVLGEVVDKIVAQENTEMQLLRRYSPLVETYIQYVRPDK
Ga0306919_103375631	3300031879	Soil	MRSHKFLPVALALSVMPLAATAQQPVVLGEVVNKILAEESKEMQLLRQYSPLVETYIQYMRPDKQLGAV
Ga0306919_109725092	3300031879	Soil	MRSLKLLSVAVAYGVMPLAAPAQQPMVLPEVVDKIMTQEHREMQLLRQ
Ga0306925_119388911	3300031890	Soil	MRSLKLLSVAVAYGVMALAASAQQPMVLPEVVDKIMTQEHREMQLLRQYSPL
Ga0318520_101975953	3300031897	Soil	MRSLKILPAALVLSAMPLGTTAQQLDGTNQVVDRIVAQEQAEMQLLRQYTPLIETYIQFL
Ga0318520_104272341	3300031897	Soil	MRSHKFLPVALALSVMPLAATAQQPVVLGEVVNKILAEESKEMQLLRQY
Ga0310912_115064321	3300031941	Soil	MRSLKILPVALAFSVMPLAASAQQPMVVGEVVDKIVAQEQREMQLLRQYSPL
Ga0310916_111647941	3300031942	Soil	MFSLKFLPLVLALSVMPPAATAQQPMVLNEIVDKIAAREHAEMQLLRRYSPLVETYIQYI
Ga0310910_103025651	3300031946	Soil	MRSHKFLPVALALSVMPLAATAQQPVVLGEVVNKILAEESKEMQLLRQYSPLVETYIQYM
Ga0310909_112515301	3300031947	Soil	MRSLKLLSVAVAYGVMALAASAQQPMVLPEVVDKIMTQEHREMQLLRQYSPLVETYIQ
Ga0306926_101018741	3300031954	Soil	MFSLKFLPLVLAFSVMPPAATAQQPMVLNEIVDKIAAREHAEMQLLRRYSPLVETYIQYVRADQHFG
Ga0318558_106081551	3300032044	Soil	MRSLKLLSVAVAYGVMPLAAPAQQPMVLPEVVDKIMTQEHREMQLLRQYSPLVETYIQYV
Ga0318504_103450671	3300032063	Soil	MFSLKFLPLVLAFSVMPPAATAQQPMVLNEIVDKIAAREHAEMQLLRRYSPLVETYIQYIRAD
Ga0318540_101383252	3300032094	Soil	MRSLKLLSVAVAYGVMPLAAPAQQPMVLPEVVDKIMTQEHREMQLLRQYSPLVETYIQYVRPD
Ga0318540_103601882	3300032094	Soil	MRSLKLLSVAVAYGVMPLAASAQQPMVLPEVVDKIMTQEHREMQLLRQYSPLVETYIQYVRP
Ga0318540_105581401	3300032094	Soil	MRSLKCLALALLFCAMSEAALEPPMTPNEMVDRIVAQEQVEMQLLRQYAPLVETYIQYVRPDKHLG
Ga0306920_1004835331	3300032261	Soil	MRSLKYLTLVLAFHVMPLAAATQQPTTMNEVVDRIVAQERAEMQLLRRYSPLVET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092165

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences