NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F092155

Metagenome / Metatranscriptome Family F092155

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092155
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 54 residues
Representative Sequence MNKVHGKKPNQLVLDYKISHLDIIPTPSKLTLDQVFKKYIRRYNTYAKKGVI
Number of Associated Samples 102
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 71.96 %
% of genes near scaffold ends (potentially truncated) 24.30 %
% of genes from short scaffolds (< 2000 bps) 89.72 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (85.981 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(24.299 % of family members)
Environment Ontology (ENVO) Unclassified
(78.505 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(86.916 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.69%    β-sheet: 0.00%    Coil/Unstructured: 67.31%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF01381HTH_3 4.67
PF03237Terminase_6N 1.87
PF01653DNA_ligase_aden 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0272NAD-dependent DNA ligaseReplication, recombination and repair [L] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.72 %
UnclassifiedrootN/A10.28 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10075664All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281520Open in IMG/M
3300000116|DelMOSpr2010_c10000775All Organisms → cellular organisms → Bacteria19988Open in IMG/M
3300000117|DelMOWin2010_c10017834All Organisms → cellular organisms → Bacteria3777Open in IMG/M
3300001943|GOS2226_1004064Not Available1682Open in IMG/M
3300002231|KVRMV2_100184897All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228644Open in IMG/M
3300002242|KVWGV2_10001501All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281630Open in IMG/M
3300003620|JGI26273J51734_10119628All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228714Open in IMG/M
3300004448|Ga0065861_1098977All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281265Open in IMG/M
3300004460|Ga0066222_1173978All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228847Open in IMG/M
3300005057|Ga0068511_1000408All Organisms → cellular organisms → Bacteria3662Open in IMG/M
3300005239|Ga0073579_1366174All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228841Open in IMG/M
3300005837|Ga0078893_10839859All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228703Open in IMG/M
3300006025|Ga0075474_10029643All Organisms → cellular organisms → Bacteria1933Open in IMG/M
3300006357|Ga0075502_1439664All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228914Open in IMG/M
3300006561|Ga0101389_1001615All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon924Open in IMG/M
3300006735|Ga0098038_1183123All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228685Open in IMG/M
3300006737|Ga0098037_1065290All Organisms → Viruses → Predicted Viral1294Open in IMG/M
3300006802|Ga0070749_10395454All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228763Open in IMG/M
3300006867|Ga0075476_10362359All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228500Open in IMG/M
3300006916|Ga0070750_10299947All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228687Open in IMG/M
3300006919|Ga0070746_10541359All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228506Open in IMG/M
3300007345|Ga0070752_1089924All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281329Open in IMG/M
3300007538|Ga0099851_1282142Not Available589Open in IMG/M
3300007539|Ga0099849_1000379All Organisms → cellular organisms → Bacteria20331Open in IMG/M
3300007640|Ga0070751_1126999All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281035Open in IMG/M
3300009077|Ga0115552_1043551All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2282074Open in IMG/M
3300009193|Ga0115551_1105951All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281316Open in IMG/M
3300009414|Ga0114909_1196063All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228515Open in IMG/M
3300009420|Ga0114994_10726256All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228647Open in IMG/M
3300009449|Ga0115558_1357428All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228574Open in IMG/M
3300009512|Ga0115003_10213783Not Available1156Open in IMG/M
3300009703|Ga0114933_10652889All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228676Open in IMG/M
3300010296|Ga0129348_1052094All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281474Open in IMG/M
3300010300|Ga0129351_1160858All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228883Open in IMG/M
3300010318|Ga0136656_1225569All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228622Open in IMG/M
3300010368|Ga0129324_10076291All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281480Open in IMG/M
3300011013|Ga0114934_10138058All Organisms → cellular organisms → Bacteria1159Open in IMG/M
3300011013|Ga0114934_10555532All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228506Open in IMG/M
3300012919|Ga0160422_10089829All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281804Open in IMG/M
3300012920|Ga0160423_10956803All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228574Open in IMG/M
3300012953|Ga0163179_10238305All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281412Open in IMG/M
3300017709|Ga0181387_1037560All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228955Open in IMG/M
3300017719|Ga0181390_1129236All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228653Open in IMG/M
3300017728|Ga0181419_1097695All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228725Open in IMG/M
3300017742|Ga0181399_1066071All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228924Open in IMG/M
3300017743|Ga0181402_1163548All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228560Open in IMG/M
3300017751|Ga0187219_1149985All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228672Open in IMG/M
3300017755|Ga0181411_1176580All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228607Open in IMG/M
3300017758|Ga0181409_1087380All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228936Open in IMG/M
3300017758|Ga0181409_1245664All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228508Open in IMG/M
3300017771|Ga0181425_1154160All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228728Open in IMG/M
3300017781|Ga0181423_1054094All Organisms → Viruses → Predicted Viral1601Open in IMG/M
3300017782|Ga0181380_1197622All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228675Open in IMG/M
3300017956|Ga0181580_10742233Not Available622Open in IMG/M
3300018416|Ga0181553_10158621All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281339Open in IMG/M
3300018420|Ga0181563_10078620All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2282217Open in IMG/M
3300020246|Ga0211707_1017899All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281003Open in IMG/M
3300020247|Ga0211654_1041940All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228705Open in IMG/M
3300020274|Ga0211658_1037704All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300020283|Ga0211482_1035577All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228504Open in IMG/M
3300020294|Ga0211520_1003741All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2282670Open in IMG/M
3300020299|Ga0211615_1044081All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228671Open in IMG/M
3300020306|Ga0211616_1044035All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228662Open in IMG/M
3300020336|Ga0211510_1078934All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228774Open in IMG/M
3300020374|Ga0211477_10301211All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228540Open in IMG/M
3300020378|Ga0211527_10147751All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228670Open in IMG/M
3300020381|Ga0211476_10086331All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281196Open in IMG/M
3300020385|Ga0211677_10431399All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228506Open in IMG/M
3300020394|Ga0211497_10088386All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281269Open in IMG/M
3300020411|Ga0211587_10179057All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228892Open in IMG/M
3300020436|Ga0211708_10220136All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228765Open in IMG/M
3300020452|Ga0211545_10349685All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228674Open in IMG/M
3300020460|Ga0211486_10130583All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281115Open in IMG/M
3300020474|Ga0211547_10428531All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228665Open in IMG/M
3300021375|Ga0213869_10299537All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228686Open in IMG/M
3300021958|Ga0222718_10000155Not Available66882Open in IMG/M
3300021959|Ga0222716_10358688Not Available860Open in IMG/M
3300021961|Ga0222714_10492525Not Available630Open in IMG/M
3300022067|Ga0196895_1037557All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228557Open in IMG/M
3300022068|Ga0212021_1111672All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228560Open in IMG/M
3300022074|Ga0224906_1078528All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281003Open in IMG/M
3300022158|Ga0196897_1014574All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228970Open in IMG/M
3300022158|Ga0196897_1037242All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228581Open in IMG/M
3300022169|Ga0196903_1023520All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228740Open in IMG/M
3300022176|Ga0212031_1007659All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281445Open in IMG/M
3300022183|Ga0196891_1032452All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228978Open in IMG/M
3300022198|Ga0196905_1146410All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228609Open in IMG/M
3300023685|Ga0228686_1051917All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228564Open in IMG/M
(restricted) 3300024255|Ga0233438_10317237All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228592Open in IMG/M
3300025101|Ga0208159_1066697All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228705Open in IMG/M
3300025151|Ga0209645_1009867Not Available3873Open in IMG/M
3300025570|Ga0208660_1134424All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228515Open in IMG/M
3300025646|Ga0208161_1119883All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228697Open in IMG/M
3300025674|Ga0208162_1000267All Organisms → cellular organisms → Bacteria30566Open in IMG/M
3300025680|Ga0209306_1059974All Organisms → Viruses → Predicted Viral1199Open in IMG/M
3300025687|Ga0208019_1166251Not Available608Open in IMG/M
3300025771|Ga0208427_1139488All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300025870|Ga0209666_1098986All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281422Open in IMG/M
3300028297|Ga0228617_1148634All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228524Open in IMG/M
3300031659|Ga0307986_10072615All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281728Open in IMG/M
3300031659|Ga0307986_10275377Not Available715Open in IMG/M
3300031669|Ga0307375_10557093All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228682Open in IMG/M
3300031785|Ga0310343_10040796Not Available2767Open in IMG/M
3300032073|Ga0315315_10213880All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2281799Open in IMG/M
3300034374|Ga0348335_094163All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228964Open in IMG/M
3300034374|Ga0348335_104139All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228883Open in IMG/M
3300034418|Ga0348337_103071All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED228923Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous24.30%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine16.82%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater12.15%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.61%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.74%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine3.74%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine3.74%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.80%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine2.80%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh2.80%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.80%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface2.80%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.87%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.87%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment1.87%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean0.93%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.93%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.93%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.93%
Marine WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water0.93%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.93%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.93%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.93%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.93%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.93%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001943Marine microbial communities from Cape May, New Jersey, USA - GS010EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002242Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey matEnvironmentalOpen in IMG/M
3300003620Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNAEnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300005057Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2umEnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006357Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006561Marine microbial communities from the Black Sea in Odessa region - Od_1EnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017771Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020246Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX555934-ERR599105)EnvironmentalOpen in IMG/M
3300020247Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556048-ERR598962)EnvironmentalOpen in IMG/M
3300020274Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX556029-ERR598943)EnvironmentalOpen in IMG/M
3300020283Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556066-ERR599155)EnvironmentalOpen in IMG/M
3300020294Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556124-ERR599153)EnvironmentalOpen in IMG/M
3300020299Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX555923-ERR599016)EnvironmentalOpen in IMG/M
3300020306Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX556014-ERR599098)EnvironmentalOpen in IMG/M
3300020336Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289008-ERR315860)EnvironmentalOpen in IMG/M
3300020374Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)EnvironmentalOpen in IMG/M
3300020378Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556006-ERR599102)EnvironmentalOpen in IMG/M
3300020381Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)EnvironmentalOpen in IMG/M
3300020385Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)EnvironmentalOpen in IMG/M
3300020394Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)EnvironmentalOpen in IMG/M
3300020411Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)EnvironmentalOpen in IMG/M
3300020436Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)EnvironmentalOpen in IMG/M
3300020452Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)EnvironmentalOpen in IMG/M
3300020460Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097)EnvironmentalOpen in IMG/M
3300020474Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300022067Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v3)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022158Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300023685Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 50R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300025101Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025570Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025680Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025870Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300028297Seawater microbial communities from Monterey Bay, California, United States - 18DEnvironmentalOpen in IMG/M
3300031659Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031785Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MGEnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1007566443300000101MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAKKGVIXWRY*
DelMOSpr2010_10000775473300000116MarineMNKVYGKKANSLVLNYDYSHLDTIPTPSKLNIDKMFARYIRRYNTYAIMTKKGVK*
DelMOWin2010_10017834113300000117MarineMNKLHGKRPNLLVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNVYAIMKGVK*
GOS2226_100406473300001943MarineMRESEMNKLHGKRPNLLVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNVYAIMKGVK*
KVRMV2_10018489723300002231Marine SedimentMNKVHGKKXNQLVLDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYAKKGVNXWRY*
KVWGV2_1000150153300002242Marine SedimentMNKVHGKKXNQLVLDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYAKKGVNQWRY*
JGI26273J51734_1011962823300003620MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAMKGVIQWRY*
Ga0065861_109897723300004448MarineMNKVHGKKPNQLVLNYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAKKGVI*
Ga0066222_117397833300004460MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAKKGVI*
Ga0068511_100040813300005057Marine WaterMNKLHGKRPNQLVYDYKISHLDIIPTPKKLSLDRMFARYIRRYNTYAKKGVN*
Ga0073579_136617413300005239MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAKKGVIQWRY*
Ga0078893_1083985913300005837Marine Surface WaterMNKLHGKRPNLLVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNVYATMKGVK*
Ga0075474_1002964323300006025AqueousMNKVYGKKANSLVLNYDYSHLDIIPTPSKLNIDKMFARYIRRYNTYAIMTKKGVK*
Ga0075502_143966453300006357AqueousGESEMNKVYGKKANSLVLNYDYSHLDTIPTPSKLNIDKMFARYIRRYNTYAIMIKKGVK*
Ga0101389_100161513300006561MarineMNKVYGKKANSLVLNYDYSHLDTIPTPSKLNRDKMFARYIRRYNTYAIMTKKGVK*
Ga0098038_118312313300006735MarineMNTVHGKKPNQLVYDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYAKKGVNQWRY*
Ga0098037_106529023300006737MarineMRESEMNKVHGKKANQLVYDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYAKKGVNQWRY*
Ga0070749_1039545413300006802AqueousMNKVYGKKANSLVLNYDYSHLDIIPTPSKLNRDKMFARYIRRYNTYAIMTKKGVR*
Ga0075476_1036235913300006867AqueousMGESEMNKVYGKKANSLVLNYDYSHLDIIPTPSKLNRDKMFARYIRRYNTYAIMTKKGVK
Ga0070750_1029994723300006916AqueousMNKLHGKRPNILVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNTYNNMKGVKY
Ga0070746_1054135913300006919AqueousMNKLHGKRPNILVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNTY
Ga0070752_108992433300007345AqueousMNKLHGKRPNILVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNVYATMKGVK*
Ga0099851_128214213300007538AqueousMGESEMNKVYGKKANSVVLNYDYSHLDLIPTPSRLSKDRIFARLIRRYNTYAIMTKKGVK
Ga0099849_100037913300007539AqueousMNKLHGKRPNILVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNTYNNMKGVKYD*
Ga0070751_112699933300007640AqueousMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKK
Ga0115552_104355133300009077Pelagic MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAKKGVIL*
Ga0115551_110595113300009193Pelagic MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAKKG
Ga0114909_119606323300009414Deep OceanMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYAKKGVNQWRY*
Ga0114994_1072625633300009420MarineSEMNKVHGKKPNQLVLDYKISHLNIIPTPSKLTVDQVFKKYIRRYNTYAKKGVI*
Ga0115558_135742813300009449Pelagic MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIRRY
Ga0115003_1021378313300009512MarineMNKVHGKKANTLVYDYNYTDLYIIPTPSKLSIDRRFTKYIRRYNAYAKMAMKGYDND*
Ga0114933_1065288923300009703Deep SubsurfaceMRESEMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYAKKGVNKWRY*
Ga0129348_105209423300010296Freshwater To Marine Saline GradientMGESEMNKVYGKKANSLVLNYDYSHLDIIPTPSKLNIDKMFARYIRRYNTYAIMTKKGVK
Ga0129351_116085813300010300Freshwater To Marine Saline GradientMGESEMNKVYGKKANSVVLNYDYSHLDTIPTPSKLNIDKMFARYIRRYNTYAIMTKKGVR
Ga0136656_122556933300010318Freshwater To Marine Saline GradientMGESEMNKVYGKKANSLVLNYDYSHLDIIPTPSKLNIDKMFARYIRRYNTYAIMTKKGVR
Ga0129324_1007629143300010368Freshwater To Marine Saline GradientMGESEMNKVYGKKANSVVLNYDYSHLDLIPTPSKLNIDKMFARYLRRYNTYAIMTKKGVK
Ga0114934_1013805833300011013Deep SubsurfaceMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYAKKGVNQWKY*
Ga0114934_1055553213300011013Deep SubsurfaceMNKVHGKKPNQLVLDFKISHLDIIPTPSKLTVDQVFKKYIRR
Ga0160422_1008982943300012919SeawaterMRESDMNKLHGKRLNQLVFDYKISHLDIIPTPKKLSLDKMFARYIRRYNTYAKKGVK*
Ga0160423_1095680313300012920Surface SeawaterRESDMNKLYGKRLNQLVYDYKISHLDIIPTPPKLSLDRMFKRYIRRYNTYNRMKGVKYD*
Ga0163179_1023830533300012953SeawaterMRESEMNKVHGKKANQLVYDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYAKKGVNQWKY*
Ga0181387_103756033300017709SeawaterMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTADQVFHKYIR
Ga0181390_112923623300017719SeawaterMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIR
Ga0181419_109769513300017728SeawaterMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTLDQVFKKYIRRYNTYAKKGVI
Ga0181399_106607113300017742SeawaterMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTIDQVFKKYIRRYNTYAKKRVIQWRY
Ga0181402_116354813300017743SeawaterMRESEMIKVHGKKANQLVYDYKISHLDIIPTPSKLTADQVF
Ga0187219_114998523300017751SeawaterMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYA
Ga0181411_117658013300017755SeawaterMRESEMIKVHGKKANQLVYDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYAKKGVNQWK
Ga0181409_108738043300017758SeawaterMNKVHGKKPNQLVLDYKISHLNIIPTPSKLTVDQVFKKYIRRYNTYAKKGVIQWRY
Ga0181409_124566413300017758SeawaterESEMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTLDQVFKKYIRRYNTYAKKGVIQWRY
Ga0181425_115416013300017771SeawaterMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYAKKGVNKWKY
Ga0181423_105409413300017781SeawaterMNKVHGKKPNQLVLNYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAKKGVIQWRY
Ga0181380_119762213300017782SeawaterMIKVHGKKANQLVYDYKISHLDIIPTPSKLTADQVFKKYIRRYNTYAKKGVNQWKY
Ga0181580_1074223313300017956Salt MarshMNKVYGKKANSLVLNYDYSHLDTIPTPSKLNRDKMFARYIRRYNTYAIMTKKGVR
Ga0181553_1015862113300018416Salt MarshMRESEMNKLYGKRLNQLVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNTYNRMKGVKYD
Ga0181563_1007862043300018420Salt MarshMNKLYGKRLNQLVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNTYNRMKGVKYD
Ga0211707_101789923300020246MarineMNKLHGKRLNQLVLDYKISHLDIIPTPKRLSLDRMFARYIRRYNTYAKKGVK
Ga0211654_104194023300020247MarineMNKLHGKRPNLLVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNVYATMKGVK
Ga0211658_103770413300020274MarineMNKLHGKRPNQLVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNVYATMKGVK
Ga0211482_103557713300020283MarineMNKLHGKRLNQLVLDYKISHLDIIPTPKRLSLDRMFARYIRRYNTYAKKGVR
Ga0211520_100374123300020294MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTADQVFKKYIRRYNTYAKKGVNQWRY
Ga0211615_104408113300020299MarineMNKLHGKRLNQLVYDYKISHLDIIPTPKRLSLDRIFARYIRRYNTYAKKGVK
Ga0211616_104403523300020306MarineMNKLHGKRLNQLVYDYKISHLDIIPTPKRLSLDRIFARYIRRYNTYAKKG
Ga0211510_107893423300020336MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYAKKGVNQWRY
Ga0211477_1030121123300020374MarineQMRESEMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTADQVFKKYIRRYNTYAKKGVNQWRY
Ga0211527_1014775133300020378MarineMNKLHGKRPNLLVYDYKISHLDIIPTPTKLSLDKMFKRYIRRYNVYATMKGVK
Ga0211476_1008633113300020381MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYAKKGVNKWRY
Ga0211677_1043139913300020385MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAKKGVI
Ga0211497_1008838633300020394MarineMRESDMNKLHGKRPNQLVYDYKISHLDIIPTPKKLSLDRMFARYIRRYNTYAKKGVN
Ga0211587_1017905723300020411MarineMNKLHGKRLNQLVYDYKISHLDIIPTPKRLSLDRMFARYIRRYNTYAKKGVR
Ga0211708_1022013623300020436MarineMNKLYGKRPNQLVSNWKISHLDIIPTPKRLSLDRMFARYIRRYNTYAKKGVKI
Ga0211545_1034968523300020452MarineMRESEMNKVHGKKANQLVYDYKISHLDIIPTPSKLTADQVFHKYIRRYN
Ga0211486_1013058343300020460MarineMNKLHGKRLNQLVLDYKISHLDIIPTPKRLSLDRMFARY
Ga0211547_1042853113300020474MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTADQVFHKYIRRYNTYAKKGVNQWKY
Ga0213869_1029953713300021375SeawaterMNKVHGKKPNQLVLDFKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAKKGVI
Ga0222718_10000155833300021958Estuarine WaterMNKLHGKRLNQLVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNTYNRMKGVKYD
Ga0222716_1035868823300021959Estuarine WaterMNKVYGKKANSLVLNYDYSHLDIIPTPSKLSIDKMFARYIRRYNTYAMMNNKKGVK
Ga0222714_1049252513300021961Estuarine WaterMNKVYGKKANSLVLNYDYSHLDTIPLPSKLSIDKMFARYIRRYNTYAIMNNKKGVK
Ga0196895_103755723300022067AqueousMNKVYGKKANSLVLNYDYSHLDIIPTPSKLNRDKMFARYIRRYNTYAIMTKKGVK
Ga0212021_111167223300022068AqueousMNKLHGKRPNLLVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNVYAIMKGVK
Ga0224906_107852813300022074SeawaterMIKVHGKKANQLVYDYKISHLDIIPTPSKLTADQVFKKYIRRYNTYAKKGVNQWRY
Ga0196897_101457413300022158AqueousLMGESEMNKVYGKKANSLVLNYDYSHLDIIPTPSKLNRDKMFARYIRRYNTYAIMTKKGV
Ga0196897_103724223300022158AqueousMNKVYGKKANSLVLNYDYSHLDTIPTPSKLNIDKMFARYIRRYNTYAIMIKKGVK
Ga0196903_102352013300022169AqueousMNKVHGKKPNQLVLNYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAKKGVI
Ga0212031_100765913300022176AqueousMNKVYGKKANSVVLNYDYSHLDQIPTPSKLNIDKMFARYIRRYNTYAIMTKKGVK
Ga0196891_103245213300022183AqueousMNKVYGKKANSLVLNYDYSHLDIIPTPSKLNIDKMFARYIRRYNTYAIMTKKGVK
Ga0196905_114641013300022198AqueousMNKVYGKKANSLVLNYDYSHLDTIPTPSKLNIDKMFARYIRRYNTYAIMTKKGVK
Ga0228686_105191723300023685SeawaterMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAKKGVIQWRY
(restricted) Ga0233438_1031723713300024255SeawaterMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAMKGVI
Ga0208159_106669713300025101MarineMNKLHGKRPNILVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNVYATMKGVK
Ga0209645_1009867103300025151MarineMNKLHGKRPNLLVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNVYANMKGVK
Ga0208660_113442413300025570AqueousMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYA
Ga0208161_111988313300025646AqueousMNKVYGKKANSLVLNYDYSHLDIIPTPSKLNIDKMFARYIRRYNTYAIMTKKGVR
Ga0208162_1000267173300025674AqueousMNKLHGKRPNILVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNTYNNMKGVKYD
Ga0209306_105997413300025680Pelagic MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAKKGVIL
Ga0208019_116625113300025687AqueousMNKVYGKKANSVVLNYDYSHLDLIPTPSRLSKDRIFARLIRRYNTYAIMTKKGVK
Ga0208427_113948813300025771AqueousMNKVYGKKANSLVLNYDYSHLDTIPTPSRLSKDRIFARLIRRYNTYAIMTKKGVK
Ga0209666_109898633300025870MarineMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYIRRYNTYAMKGVIQWRY
Ga0228617_114863413300028297SeawaterMNKVHGKKPNQLVLDYKISHLDIIPTPSKLTVDQVFKKYI
Ga0307986_1007261513300031659MarineMNKVHGKKANTLVYDYNYTDLYIIPTPSKLSIDRRFTKYIRRYNAYAKLAMKGYDHD
Ga0307986_1027537713300031659MarineKVHGKKANTLVYDYNYTDLYIIPTPSKLSIDRRFTKYIRRYNTYAKLAMKGYDHD
Ga0307375_1055709323300031669SoilMGESEMNKVYGKKANSLVLNYDYSHLDTIPTPSKLNIDKMFARYIRRYNTYAIMNKKGVK
Ga0310343_1004079623300031785SeawaterMNKLHGKRLNQLVYDYKISHLDIIPTPKRLSLDRMFARYIRRYNTYAKKGVK
Ga0315315_1021388013300032073SeawaterMNKLHGKRPNLLVYDYKISHLDIIPTPPKLSLDKMFKRYIRRYNTYNNMKGVKYG
Ga0348335_094163_448_6303300034374AqueousMGESEMNKVYGKKANSLVLNYDYSHLDTIPTPSKLNIDKMFARYIRRYNTYAIMTKKGVK
Ga0348335_104139_684_8663300034374AqueousMGESEMNKVYGKKANSLVLNYDYSHLDIIPTPSKLNRDKMFARYIRRYNTYAIMTKKGVR
Ga0348337_103071_342_5243300034418AqueousMGESEMNKVYGKKANSLVLNYDYSHLDTIPTPSKLNIDKMFARYIRRYNTYAIMIKKGVK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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