Metagenome / Metatranscriptome Family F092131

Basic Information
Family ID	F092131
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	55 residues
Representative Sequence	IRGTVTGPEFVATARILPPEEHPRARQAINRKYWMARIPLIWARTDTYFEISFA
Number of Associated Samples	97
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.94 %
% of genes near scaffold ends (potentially truncated)	92.52 %
% of genes from short scaffolds (< 2000 bps)	83.18 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Unclassified (50.467 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (9.346 % of family members)
Environment Ontology (ENVO)	Unclassified (22.430 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.860 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.83% β-sheet: 12.20% Coil/Unstructured: 60.98%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00044	Gp_dh_N	29.91
PF07992	Pyr_redox_2	17.76
PF02800	Gp_dh_C	14.95
PF00162	PGK	3.74
PF08241	Methyltransf_11	3.74
PF04014	MazE_antitoxin	3.74
PF10418	DHODB_Fe-S_bind	2.80
PF01243	Putative_PNPOx	1.87
PF00121	TIM	0.93
PF02518	HATPase_c	0.93
PF00437	T2SSE	0.93
PF13671	AAA_33	0.93
PF01850	PIN	0.93
PF01326	PPDK_N	0.93
PF04542	Sigma70_r2	0.93
PF13011	LZ_Tnp_IS481	0.93
PF02472	ExbD	0.93
PF05977	MFS_3	0.93
PF03693	ParD_antitoxin	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	44.86
COG0126	3-phosphoglycerate kinase	Carbohydrate transport and metabolism [G]	3.74
COG0149	Triosephosphate isomerase	Carbohydrate transport and metabolism [G]	0.93
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.93
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	0.93
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.93
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.93
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.93
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	0.93
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
All Organisms	root	All Organisms	49.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
cellular organisms	root	All Organisms → cellular organisms	49.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.60 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.89 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.28 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.80 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.28 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.28 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.93 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.93 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.93 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.93 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.93 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.93 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.93 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Rhabditina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina	0.93 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Rhabditomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha	0.93 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Rhabditoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea	0.93 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Rhabditidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae	0.93 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Rhabditidae incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis	0.93 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Diploscapter	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter	0.93 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.80 %
Diploscapter pachys	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	0.93 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10119059	Not Available	1082	Open in IMG/M
3300000567\|JGI12270J11330_10253245	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300001990\|JGI24737J22298_10176917	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300004080\|Ga0062385_10652651	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300004114\|Ga0062593_100047017	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300005184\|Ga0066671_11023344	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005340\|Ga0070689_101748525	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005539\|Ga0068853_102031318	Not Available	557	Open in IMG/M
3300005564\|Ga0070664_101283684	Not Available	691	Open in IMG/M
3300005569\|Ga0066705_10940577	Not Available	513	Open in IMG/M
3300005578\|Ga0068854_102281144	Not Available	501	Open in IMG/M
3300005586\|Ga0066691_10043600	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2377	Open in IMG/M
3300005602\|Ga0070762_10096503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1704	Open in IMG/M
3300005719\|Ga0068861_100067164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2766	Open in IMG/M
3300006028\|Ga0070717_11064631	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300006028\|Ga0070717_11064732	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300006034\|Ga0066656_10327446	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300006358\|Ga0068871_101922371	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300006860\|Ga0063829_1483000	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300006893\|Ga0073928_10533372	Not Available	837	Open in IMG/M
3300009038\|Ga0099829_11207732	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300009092\|Ga0105250_10513285	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300009101\|Ga0105247_10918658	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300009147\|Ga0114129_10377795	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1872	Open in IMG/M
3300009520\|Ga0116214_1215164	Not Available	725	Open in IMG/M
3300009624\|Ga0116105_1052040	Not Available	943	Open in IMG/M
3300009824\|Ga0116219_10716918	Not Available	547	Open in IMG/M
3300010043\|Ga0126380_10090650	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300010048\|Ga0126373_10151135	All Organisms → cellular organisms → Bacteria	2207	Open in IMG/M
3300010359\|Ga0126376_11897956	Not Available	635	Open in IMG/M
3300010373\|Ga0134128_11059556	All Organisms → cellular organisms → Bacteria → Acidobacteria	896	Open in IMG/M
3300012096\|Ga0137389_11764412	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300012203\|Ga0137399_10296717	Not Available	1335	Open in IMG/M
3300012207\|Ga0137381_10598144	Not Available	961	Open in IMG/M
3300012582\|Ga0137358_11011462	Not Available	537	Open in IMG/M
3300014169\|Ga0181531_10774329	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300014657\|Ga0181522_10031414	All Organisms → cellular organisms → Bacteria	2934	Open in IMG/M
3300014657\|Ga0181522_10149350	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1366	Open in IMG/M
3300014968\|Ga0157379_10365523	Not Available	1323	Open in IMG/M
3300015193\|Ga0167668_1006291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2664	Open in IMG/M
3300015373\|Ga0132257_100558184	Not Available	1411	Open in IMG/M
3300017936\|Ga0187821_10267007	Not Available	672	Open in IMG/M
3300017948\|Ga0187847_10034380	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2991	Open in IMG/M
3300017970\|Ga0187783_10532019	Not Available	851	Open in IMG/M
3300017972\|Ga0187781_10486629	Not Available	885	Open in IMG/M
3300017972\|Ga0187781_11136285	Not Available	574	Open in IMG/M
3300017995\|Ga0187816_10011380	All Organisms → cellular organisms → Bacteria	3303	Open in IMG/M
3300018007\|Ga0187805_10339046	Not Available	694	Open in IMG/M
3300018085\|Ga0187772_10254313	Not Available	1194	Open in IMG/M
3300018085\|Ga0187772_10262098	Not Available	1176	Open in IMG/M
3300018085\|Ga0187772_10522884	Not Available	838	Open in IMG/M
3300018088\|Ga0187771_10236133	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300018088\|Ga0187771_10642817	Not Available	900	Open in IMG/M
3300018090\|Ga0187770_11099340	Not Available	641	Open in IMG/M
3300019278\|Ga0187800_1388403	Not Available	1265	Open in IMG/M
3300020579\|Ga0210407_10755725	Not Available	752	Open in IMG/M
3300021046\|Ga0215015_11099067	Not Available	1140	Open in IMG/M
3300021170\|Ga0210400_10434477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M
3300021171\|Ga0210405_10173066	Not Available	1711	Open in IMG/M
3300021401\|Ga0210393_10329121	Not Available	1243	Open in IMG/M
3300021401\|Ga0210393_10748239	Not Available	796	Open in IMG/M
3300021405\|Ga0210387_10265742	Not Available	1503	Open in IMG/M
3300021420\|Ga0210394_10451334	Not Available	1131	Open in IMG/M
3300021420\|Ga0210394_11442166	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300021861\|Ga0213853_10552704	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300025320\|Ga0209171_10484047	Not Available	616	Open in IMG/M
3300025473\|Ga0208190_1080217	Not Available	652	Open in IMG/M
3300025494\|Ga0207928_1000646	All Organisms → cellular organisms → Bacteria	5325	Open in IMG/M
3300025711\|Ga0207696_1187962	Not Available	545	Open in IMG/M
3300025900\|Ga0207710_10751799	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300025906\|Ga0207699_11353523	Not Available	527	Open in IMG/M
3300025928\|Ga0207700_10010419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5864	Open in IMG/M
3300025936\|Ga0207670_11453186	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300025945\|Ga0207679_12125529	Not Available	510	Open in IMG/M
3300025981\|Ga0207640_12196492	Not Available	501	Open in IMG/M
3300026291\|Ga0209890_10286206	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300026514\|Ga0257168_1002142	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2839	Open in IMG/M
3300026551\|Ga0209648_10103460	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2329	Open in IMG/M
3300026557\|Ga0179587_10924223	Not Available	575	Open in IMG/M
3300027502\|Ga0209622_1076270	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300027681\|Ga0208991_1122658	Not Available	774	Open in IMG/M
3300027854\|Ga0209517_10000384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	77115	Open in IMG/M
3300027884\|Ga0209275_10024320	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2739	Open in IMG/M
3300027898\|Ga0209067_10648652	Not Available	609	Open in IMG/M
3300027898\|Ga0209067_10904217	Not Available	519	Open in IMG/M
3300028562\|Ga0302151_10315829	Not Available	517	Open in IMG/M
3300028780\|Ga0302225_10034842	All Organisms → cellular organisms → Bacteria	2521	Open in IMG/M
3300028906\|Ga0308309_11906353	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300030043\|Ga0302306_10029109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2243	Open in IMG/M
3300030045\|Ga0302282_1134157	Not Available	986	Open in IMG/M
3300030053\|Ga0302177_10122985	Not Available	1484	Open in IMG/M
3300030057\|Ga0302176_10435249	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300030503\|Ga0311370_10458801	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	1578	Open in IMG/M
3300031057\|Ga0170834_103920266	Not Available	750	Open in IMG/M
3300031128\|Ga0170823_16261380	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300031231\|Ga0170824_109961388	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300031708\|Ga0310686_106043678	Not Available	1011	Open in IMG/M
3300031753\|Ga0307477_10225157	Not Available	1301	Open in IMG/M
3300031823\|Ga0307478_10085443	All Organisms → cellular organisms → Bacteria	2417	Open in IMG/M
3300031954\|Ga0306926_12125339	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031962\|Ga0307479_10442893	Not Available	1283	Open in IMG/M
3300032094\|Ga0318540_10645349	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300032174\|Ga0307470_10444638	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300032770\|Ga0335085_10768433	Not Available	1064	Open in IMG/M
3300032898\|Ga0335072_10487825	Not Available	1282	Open in IMG/M
3300034163\|Ga0370515_0430518	Not Available	557	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.98%
Host-Associated	Host-Associated	14.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.96%
Aquatic	Environmental → Aquatic	14.02%
Plants	Host-Associated → Plants	14.02%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.42%
Freshwater	Environmental → Aquatic → Freshwater	10.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.48%
Peat	Environmental → Terrestrial → Peat	6.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.61%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.87%
Sediment	Environmental → Aquatic → Sediment	1.87%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.06%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.08%
Loam	Environmental → Terrestrial → Soil → Loam	10.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.67%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.15%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.87%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.35%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.61%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.87%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.87%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.93%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006860	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092131

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101190591	3300000567	Peatlands Soil	VTGPEFAATARILPSEEHARARQAINRKYWMARLPLVWVRTDTYFEIIFA*
JGI12270J11330_102532452	3300000567	Peatlands Soil	VAPCTIRGRVTGPAFAATVRILPPEEHAHARQTIDRKYWAARLPLIWGRTDTYFELSFSES*
JGI24737J22298_101769171	3300001990	Corn Rhizosphere	RIHNNPKVKVAPCTIRGKVTGSEFNAVARILPAADGPAARKTIDRKYFMARLPLIWSRTDTYLEIEIVP*
Ga0062385_106526511	3300004080	Bog Forest Soil	TIRGKATGPEFAASARILPPEEHARAREAINRKYWAARLPLIWRRTDTYVELTFP*
Ga0062593_1000470171	3300004114	Soil	IRGKVTGPEFAARARILPPEQHRSARQTLDRKYWMARLPWIWRRTDTYIEISFE*
Ga0066671_110233441	3300005184	Soil	VKVAPCTIRGKVTGPEFNAVARILPAQDGPAARRAINRKYFMARLPLIWSRTDTYFEIEIVP*
Ga0070689_1017485251	3300005340	Switchgrass Rhizosphere	CTIRGKVTGSEFNAVARILPAADGPAARKTIDRKYFMARLPLIWSRTDTYLEIEIVP*
Ga0068853_1020313181	3300005539	Corn Rhizosphere	RGKVTGREFAATARILSPDEFAAARRTINRKYWAARIPFIWYRTNAYFEITVK*
Ga0070664_1012836842	3300005564	Corn Rhizosphere	GKVTGSEFNAVARILPAADGPAARKTIDRKYFMARLPLIWSRTDTYLEIEIVP*
Ga0066705_109405771	3300005569	Soil	PEFAARARILPPEEHRSARQRLDRKYWMARIPWIWRRTDTYIEISFG*
Ga0068854_1022811441	3300005578	Corn Rhizosphere	IRGKVTGSEFNAVARILPAADGPAARKTIDRKYFMARLPLIWSRTDTYLEIEIVP*
Ga0066691_100436001	3300005586	Soil	GRVTGPESPATARILPVEEHSRARQIINRKYWLARLPLLWNRTDAYLEIAFP*
Ga0070762_100965033	3300005602	Soil	TIRGKVTGAEFGAAARILPPEEQARARQAINRKYWMARIPLVWARTDTYIEISFP*
Ga0068861_1000671641	3300005719	Switchgrass Rhizosphere	PKVKVAPCTIRGKVTGSEFNAVARILPAADGPAARKTIDRKYFMARLPLIWSRTDTYLEIEIVP*
Ga0070717_110646312	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IAPCTMRGRVTGAESPAIARILAVEEHSRARQIINRKYWLTRLPLLWSRTDAYIEIGFP*
Ga0070717_110647322	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IRGKVTGPEFAARARILPPEEHRSARQTLDRKYWMARIPWIWRRTDTYIEISFG*
Ga0066656_103274461	3300006034	Soil	APCTIRGVITGLMFDAIARILPPEEHADARKAINRKYWAARIPFLWWRTDAYLEITLP*
Ga0068871_1019223711	3300006358	Miscanthus Rhizosphere	PQVRVAPCTIGGKVTGAEVAATARILSVDEHARARKTINRKYWMARIPLVWWRTDTYLEISFE*
Ga0063829_14830002	3300006860	Peatlands Soil	TGAELAATARILPPEEHARARQAINHKYWMARIPLIWARTDTYLEVSFA*
Ga0073928_105333722	3300006893	Iron-Sulfur Acid Spring	GRVRGPESPAIARILPVEEHSRARQIINRKYWLARLPLLWSRTDAYIEIGFP*
Ga0099829_112077321	3300009038	Vadose Zone Soil	TIRGTVNGAEFAATARILPPEEHARARQAINRKYWMARIPLLWWRTDTYLELSLDQPQTG
Ga0105250_105132851	3300009092	Switchgrass Rhizosphere	PKVKVAPCTIRGKVTGPEFNAVARILPAGDGPAARKTINRKYFLARLPLIWSRTDTYFEIEFVP*
Ga0105247_109186581	3300009101	Switchgrass Rhizosphere	NNPKVKVAPCTIRGKVTGSEFNAVARILPAADGPAARKTIDRKYFMARLPLIWSRTDTYLEIEIVP*
Ga0114129_103777951	3300009147	Populus Rhizosphere	ACTMRGTITGPEFAGTARMLPVQEHAQARKAINEKYWAARIPFIWRRTDAYLEVSFT*
Ga0116214_12151642	3300009520	Peatlands Soil	IRGTVTGPEFVATARILPPEEHPRARQAINRKYWMARIPLIWARTDTYFEISFA*
Ga0116105_10520401	3300009624	Peatland	KVTGPEFDAMARILSQEEHAHARRGINRKYWAARLPLVWRRTDTYIEITFP*
Ga0116219_107169182	3300009824	Peatlands Soil	RGRVTGPAFAATVRILPPEEHAHARQTIDRKYWAARLPLIWGRTDTYFELSFSES*
Ga0126380_100906501	3300010043	Tropical Forest Soil	PCTMRGKVTGSALSAQARILPPEEHELARAAINRKYWLARIPLIWARTDTYFEITFG*
Ga0126373_101511352	3300010048	Tropical Forest Soil	TGPEFEGTARILQREEHQHARQTINRKYWMAKIPLIWARTDTYFEISFS*
Ga0126376_118979562	3300010359	Tropical Forest Soil	APCTIRGKVTGPEFNAVARILPAADGPAARKTINRKYFMARLPLIWSRTDTYFEIEFVP*
Ga0134128_110595562	3300010373	Terrestrial Soil	VTGPEFAARARILPPEEHRSARQTLDRKYWMARIPWIWRRTDTYIEISFG*
Ga0137389_117644122	3300012096	Vadose Zone Soil	NNPQVRVAPCTIRGVVNGPEVAATARILPVEDHSRARRAINRKYWAARIPFLWWRTDAYLEITFP*
Ga0137399_102967171	3300012203	Vadose Zone Soil	GPEYAALARIVPPEEHAHGREAINRKYWMARLPLIWRRTDTYLEITFP*
Ga0137381_105981441	3300012207	Vadose Zone Soil	NPQVGVAPCTIRGKVTGAEFAATARILPVEEHERARRTINRKYWAARLPLIWARTDTYLEISFA*
Ga0137358_110114621	3300012582	Vadose Zone Soil	RGKITGPEYAALARIVPPEEHAHGREAINRKYWMARLPLIWRRTDTYLEITFP*
Ga0181531_107743291	3300014169	Bog	PQVQVAPCTIRGKVTGPEFAAAARILSPPDHPHARETINRKYWMAKLPLVWWRTDTYLELTFS*
Ga0181522_100314144	3300014657	Bog	GKVTGPELAAMARILPPSEQEHARQSINHKYWLARLPLVWSRTDTYLEITFV*
Ga0181522_101493501	3300014657	Bog	PESPATARILPPQDHAHARATINRKYWLARIPLVWYRTNTYFEITFD*
Ga0157379_103655231	3300014968	Switchgrass Rhizosphere	IHNNPKVKVAPSTIRGKVTGSEFNAVARILPAADGPAARKTIDRKYFMARLPLIWSRTDTYLEIEIVP*
Ga0167668_10062912	3300015193	Glacier Forefield Soil	PEFAARARILPAEDNGRARQAINRKYWAARIPLLWWRTDTYLELSFE*
Ga0132257_1005581842	3300015373	Arabidopsis Rhizosphere	VTGPEFNAAARILPPADGPAARKTINRKYFMARLPLIWSRTDTYLEIEIVP*
Ga0187821_102670071	3300017936	Freshwater Sediment	CTMSGKITGPDFAGSARLLPPGEFSHARQTINRKYWLARLPWIWRRTDAYLEISITA
Ga0187847_100343805	3300017948	Peatland	VAPCTIRGTVTGEQVAATARILPPEDHARARQTINRKYWPARIPLVWWRTDTYIEISFG
Ga0187783_105320191	3300017970	Tropical Peatland	IGSAVEALARILPPEEHAHARLAIDRKYWMARLPLIWSRTETYLELSFP
Ga0187781_104866291	3300017972	Tropical Peatland	PQVKVAPCTIGGRVTGPEFAATARILPKEEHTRARQTINRKYWMARIPLIWWRTDTYFEISFG
Ga0187781_111362851	3300017972	Tropical Peatland	KVTGPEFAATARILPPEEQAHARQTINQKYWMARIPLIWARTDTYFEISFD
Ga0187816_100113801	3300017995	Freshwater Sediment	RVTGAEFAATARILPPEEHARARQPINRKYWMARLPLIWSRTDTYIEISFE
Ga0187805_103390462	3300018007	Freshwater Sediment	PCTIRGKVTGPEFAATARILPPDEHKHARQTINRKYWMARLPLIWAGTDTYFEITFA
Ga0187772_102543132	3300018085	Tropical Peatland	APCTIRGTVTGPEFDATARILPADEHQRARQSINRKYWMARIPLIWARTDTYFELTFG
Ga0187772_102620982	3300018085	Tropical Peatland	MRGKVTGPEFPATARILPPEDFRHGRESINRKYWMARIPWIWRRTDTCFEISFG
Ga0187772_105228842	3300018085	Tropical Peatland	GRVTGAEVDATARILPAEEHAHARGTINRKYWMARVPLIWRRTDTYLELTFA
Ga0187771_102361331	3300018088	Tropical Peatland	GPEFSAMARILPPEEQARARQTINRKYWMARLPLIWARTDTYFELSFA
Ga0187771_106428171	3300018088	Tropical Peatland	PQVTVSPCTMTGKVTGAEFAATARILPPEEHARARQTINRKYWMARIPLIWARTDTYFEISFA
Ga0187770_110993401	3300018090	Tropical Peatland	GKVTAPVEFFAQARILPQEEHAHARKTINKKYWMARVPLIWFRTDTYLELTFPSGKIEID
Ga0187800_13884032	3300019278	Peatland	PEFAATARILPPEEHGHARQTINRRYWLARLPLIWARTDTYFEISFV
Ga0210407_107557251	3300020579	Soil	RVAPSTIRGRVTGPESPAIARLLPVEEHSRARQIINRKYWLARLPLLWIRTDAYIEIAFP
Ga0215015_110990671	3300021046	Soil	VTGPEFAATARILPVEDHARARKAINRKYWAARIPFLWWRTDAYLEITFP
Ga0210400_104344772	3300021170	Soil	TIRGKVTGAEFGAAARILPPEEQARARQAINRKYWMARIPLVWARTDTYIEISFP
Ga0210405_101730661	3300021171	Soil	VKVAPCTIRGKVTGAEFAATARLLPAEEHARARKAINRKYWMTRLPLVWMRSDTYIELRF
Ga0210393_103291212	3300021401	Soil	TIRGKVTGPEFPARARILPPEEHASARQTINRRYWMARLPLIWARTDTYFEISFA
Ga0210393_107482392	3300021401	Soil	RGNVTGAKFFAQARILPPEEHGHARQAINRKYWAARLPLIWRRTDAYLELSFP
Ga0210387_102657422	3300021405	Soil	CTIRGKVTGDKLFAQARILPPEEHAHARQAINRKYWAARLPWVWWRTDTYLELTFP
Ga0210394_104513341	3300021420	Soil	VTGAEIAATARILPPEEHERARRPINRKYWAARIPFLWWRTDTYLELSFG
Ga0210394_114421662	3300021420	Soil	RAAPCTIRGKVTGAEFGATARILPPEDHARARQTIDRKYWMARIPLLWSRTDTYIELSFS
Ga0213853_105527042	3300021861	Watersheds	RGKVTGPEFPATARILPQEDHARARQTINRKYWMARLPLIWARTDTYFELSFS
Ga0209171_104840471	3300025320	Iron-Sulfur Acid Spring	PESPAIARILPVEEHSRARQIINRKYWLARLPLLWSRTDAYIEIGFP
Ga0208190_10802171	3300025473	Peatland	CVAPCTIRGKVTGAQFDASARILTQAEQAHARERINQKYWAARLPLIWYRTDTYIALTFP
Ga0207928_10006467	3300025494	Arctic Peat Soil	VRVAPCTMRGTVTGAEFAATARILPPEEHARARQTINRKYWMARIPLVWFRTDTYFEISF
Ga0207696_11879621	3300025711	Switchgrass Rhizosphere	PKVKVAPCTIRGKVTGPEFNAVARILPAGDGPAARKTINRKYFLARLPLIWSRTDTYFEIEFVP
Ga0207710_107517992	3300025900	Switchgrass Rhizosphere	NNPKVKVAPCTIRGKVTGSEFNAVARILPAADGPAARKTIDRKYFMARLPLIWSRTDTYLEIEIVP
Ga0207699_113535232	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	PCTIRGKVTGPEFAARARILPPAEHRSARQTLDRKYWMSRIPWIWRRTDTYIEISFE
Ga0207700_100104195	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTGSEFAATARILPAEEHKHARQTINRKYWMARIPLIWSRTDTYFEISFP
Ga0207670_114531862	3300025936	Switchgrass Rhizosphere	VKVAPCTIRGKVTGSEFNAVARILPAADGPAARKTIDRKYFMARLPLIWSRTDTYLEIEIVP
Ga0207679_121255291	3300025945	Corn Rhizosphere	GKVTGSEFNAVARILPAADGPAARKTIDRKYFMARLPLIWSRTDTYLEIEIVP
Ga0207640_121964921	3300025981	Corn Rhizosphere	IRGKVTGSEFNAVARILPAADGPAARKTIDRKYFMARLPLIWSRTDTYLEIEIVP
Ga0209890_102862061	3300026291	Soil	VTGAEFAATARILPVEDHARARKAINRKYWAARIPFLWWRTDTYIELSF
Ga0257168_10021421	3300026514	Soil	PAIARILPVEEHSRARQIINRKYWLARLPLLWSRTDAYIEIGFP
Ga0209648_101034601	3300026551	Grasslands Soil	SPQVQVAPCTFRGTVRGPESPAIARILPVEEHSRARQIINRKYWLARLPLLWSRTDAYIEIGFP
Ga0179587_109242232	3300026557	Vadose Zone Soil	GAVTGAESAAVARILPPEEHARARETINRKYWLARVPLIWRRTDTYLELSFP
Ga0209622_10762702	3300027502	Forest Soil	PQVKVAPSTIRGKVTGPEFPATARIVPPEEHKHAREAINRKYWMARIPLIWSRTDTYFEITFG
Ga0208991_11226581	3300027681	Forest Soil	RGRVKGPEYPAIARILPVEEHSRARQIINGKYWLARLPLLWSRTDAYIEIAFP
Ga0209517_100003846	3300027854	Peatlands Soil	VAPCTIRGRVTGPAFAATVRILPPEEHAHARQTIDRKYWAARLPLIWGRTDTYFELSFSE
Ga0209275_100243203	3300027884	Soil	TGNEVAATARLLPAEEHARARKAINRKYWMTRLPLVWMRSDTYIELRFG
Ga0209067_106486522	3300027898	Watersheds	PCTIRGTVSGPEFAATARILPPEEHARARQAINRKYWMARIPLIWARTDTYFEISFA
Ga0209067_109042172	3300027898	Watersheds	TGPEFPATARILPPEDHARARQTINRKYWMARLPLIWSRTDTYFEISFG
Ga0302151_103158291	3300028562	Bog	RGKVTGPEFPALARILPPQNHAQARQTINRKYWAARLPLLWRRTDTYLELTFP
Ga0302225_100348421	3300028780	Palsa	VALCTIRGKVTGPEFAATARILPREEQARARQTINRKYWLARLPLVWWRTDTYIEISFG
Ga0308309_119063531	3300028906	Soil	QVAPCTIRGAVTGPEFAATARILPPEEHAHARQTINRKYWMARIPLVWWRTDTYFELSF
Ga0302306_100291092	3300030043	Palsa	MRGKVTGPEVAATARILPPEEHSHARQAINRKYWAARLPLLWRRTDAYLELSFP
Ga0302282_11341571	3300030045	Fen	TIRGKVTGPEFPAMARILPPQNHAQARQTINRKYWAARLPLLWRRTDTYLELTFP
Ga0302177_101229852	3300030053	Palsa	RGRVTGPLFPATARILPPEQHTHARQAINRKYWAARLPLIWWRTDTYLELSFSST
Ga0302176_104352491	3300030057	Palsa	PEFAATARILPREEQARARQTINRKYWLARLPLVWWRTDTYIEISFG
Ga0311370_104588011	3300030503	Palsa	APCKIRGKVTGAEVAATARLLPAKEHARARQAINRKYWLARLPLVWVRTDTYVELRFE
Ga0265762_12011431	3300030760	Soil	GKVTGSEFAATARVLPPEEHARARQTINRKYWAARLSAKWSRADAFVELTFG
Ga0170834_1039202661	3300031057	Forest Soil	HVKVAPSTIRGKVKGAEFGAIARILPPEEHKHARESINRKYWMARIPLIWSRTDTYFEITFN
Ga0170823_162613803	3300031128	Forest Soil	APCTIRGTVTGTEFAATARILSPEEHARARQAINRKYWMARIPLLWWRTDTYLELSFD
Ga0170824_1099613882	3300031231	Forest Soil	VRVAPCTIRGTVTGTEFAATARILSPEEHARARQAINRKYWMARIPLLWWRTDTYLELSF
Ga0310686_1060436781	3300031708	Soil	IRGKVTGPEFAAVARILPPPEHAHARQTLNRKYWMARLPLIWWRTDTYLEITFP
Ga0307477_102251571	3300031753	Hardwood Forest Soil	IRGTVMGPEFEATARILPAEEHPDARQTINRKYWAARLPLLWSRTDAYLELTFP
Ga0307478_100854431	3300031823	Hardwood Forest Soil	PCTIRGTVTGSEFDAKARILPPEEHNHARETINRKYWMARIPLVWRRTDTYLELSFS
Ga0306926_121253392	3300031954	Soil	TGPEFPAIARILPPEEHKHARETINRKYWMARIPLIWSRTDAYFEITFA
Ga0307479_104428931	3300031962	Hardwood Forest Soil	VIGPEFEATARILPAEEHPDARQTINRKYWAARLPLLWSRTDAYLELTFP
Ga0318540_106453491	3300032094	Soil	GKVTGAEFTATARILPAEEHQHARAAINRKYWMARIPLVWARTDTYFEISFV
Ga0307470_104446382	3300032174	Hardwood Forest Soil	GAELPATARILSPEEHPRARQAINRKYWMARIPLVWWRTDTYLELSFD
Ga0335085_107684332	3300032770	Soil	RVAPCSIRGIVTGPESAATARILPPQDHARARQTINRKYWMARIPLVWWRTDTYIEISFE
Ga0335072_104878251	3300032898	Soil	AVAPCTIRGKVTGAEFPAAARILPPEEHAHARQTINRKYWMARLPLIWSKTDTYFEITFG
Ga0370515_0430518_3_173	3300034163	Untreated Peat Soil	CTILGRVTGAEFAATARVLPQEEHARARQAINRKYWAARLSSIWSRADAFVELTFG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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