Metagenome / Metatranscriptome Family F092123

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092123
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	145 residues
Representative Sequence	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL
Number of Associated Samples	92
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.61 %
% of genes near scaffold ends (potentially truncated)	64.49 %
% of genes from short scaffolds (< 2000 bps)	75.70 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.084 % of family members)
Environment Ontology (ENVO)	Unclassified (49.533 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.159 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.50% β-sheet: 51.88% Coil/Unstructured: 45.62%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02482	Ribosomal_S30AE	26.17
PF07517	SecA_DEAD	7.48
PF00156	Pribosyltran	6.54
PF01008	IF-2B	4.67
PF01704	UDPGP	4.67
PF01050	MannoseP_isomer	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	26.17
COG0653	Preprotein translocase subunit SecA (ATPase, RNA helicase)	Intracellular trafficking, secretion, and vesicular transport [U]	7.48
COG0182	5-methylthioribose/5-deoxyribulose 1-phosphate isomerase (methionine salvage pathway), a paralog of eIF-2B alpha subunit	Amino acid transport and metabolism [E]	4.67
COG1184	Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family	Translation, ribosomal structure and biogenesis [J]	4.67
COG4284	UDP-N-acetylglucosamine pyrophosphorylase	Carbohydrate transport and metabolism [G]	4.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	87.85 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	87.85 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	86.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	81.31 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	81.31 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001991\|JGI24743J22301_10083264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300002244\|JGI24742J22300_10117830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300003203\|JGI25406J46586_10015805	All Organisms → cellular organisms → Bacteria	3169	Open in IMG/M
3300003996\|Ga0055467_10038741	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300004013\|Ga0055465_10082258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	932	Open in IMG/M
3300004643\|Ga0062591_101784307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300005329\|Ga0070683_100103607	All Organisms → cellular organisms → Bacteria	2682	Open in IMG/M
3300005331\|Ga0070670_100047066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3710	Open in IMG/M
3300005331\|Ga0070670_101909481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300005333\|Ga0070677_10719399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300005339\|Ga0070660_101024711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300005345\|Ga0070692_10547935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300005354\|Ga0070675_100871378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300005355\|Ga0070671_100063838	All Organisms → cellular organisms → Bacteria	3067	Open in IMG/M
3300005365\|Ga0070688_100197476	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300005366\|Ga0070659_100431220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1116	Open in IMG/M
3300005441\|Ga0070700_100420698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1009	Open in IMG/M
3300005441\|Ga0070700_100430942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	999	Open in IMG/M
3300005457\|Ga0070662_100077333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2469	Open in IMG/M
3300005458\|Ga0070681_10453510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1195	Open in IMG/M
3300005459\|Ga0068867_100050546	All Organisms → cellular organisms → Bacteria	3064	Open in IMG/M
3300005549\|Ga0070704_101008726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300005840\|Ga0068870_10113330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1552	Open in IMG/M
3300005937\|Ga0081455_10286192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1188	Open in IMG/M
3300006058\|Ga0075432_10477315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300006358\|Ga0068871_102405292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300006881\|Ga0068865_100106476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2061	Open in IMG/M
3300007076\|Ga0075435_101721419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300009098\|Ga0105245_10360147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1443	Open in IMG/M
3300009101\|Ga0105247_10038845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2907	Open in IMG/M
3300009146\|Ga0105091_10573404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300009148\|Ga0105243_10002408	All Organisms → cellular organisms → Bacteria	15667	Open in IMG/M
3300009148\|Ga0105243_10014023	All Organisms → cellular organisms → Bacteria	6066	Open in IMG/M
3300009174\|Ga0105241_10977123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300009176\|Ga0105242_10038975	All Organisms → cellular organisms → Bacteria	3824	Open in IMG/M
3300009176\|Ga0105242_10268131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1545	Open in IMG/M
3300009177\|Ga0105248_10062519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4180	Open in IMG/M
3300009873\|Ga0131077_10856645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300010362\|Ga0126377_10031133	All Organisms → cellular organisms → Bacteria	4509	Open in IMG/M
3300010371\|Ga0134125_10940238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	949	Open in IMG/M
3300010373\|Ga0134128_10727167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1102	Open in IMG/M
3300010375\|Ga0105239_10537797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1330	Open in IMG/M
3300010399\|Ga0134127_11195001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300010403\|Ga0134123_10057024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2962	Open in IMG/M
3300011107\|Ga0151490_1679550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1093	Open in IMG/M
3300012490\|Ga0157322_1017550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300012507\|Ga0157342_1001724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1677	Open in IMG/M
3300012514\|Ga0157330_1015069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	816	Open in IMG/M
3300012906\|Ga0157295_10025905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1222	Open in IMG/M
3300012915\|Ga0157302_10567263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300012943\|Ga0164241_10179563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1515	Open in IMG/M
3300012943\|Ga0164241_10242364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1289	Open in IMG/M
3300012951\|Ga0164300_10021975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2223	Open in IMG/M
3300012951\|Ga0164300_11102660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300012958\|Ga0164299_10468496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	829	Open in IMG/M
3300012958\|Ga0164299_10741947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300012961\|Ga0164302_10088121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1677	Open in IMG/M
3300012985\|Ga0164308_10452006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1064	Open in IMG/M
3300012985\|Ga0164308_10639664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	910	Open in IMG/M
3300012987\|Ga0164307_10673373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300012987\|Ga0164307_10985223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300013100\|Ga0157373_11181016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300013105\|Ga0157369_10961052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	875	Open in IMG/M
3300013306\|Ga0163162_10108315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2875	Open in IMG/M
3300013306\|Ga0163162_12109928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300013306\|Ga0163162_13190203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300014325\|Ga0163163_11316633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300014497\|Ga0182008_10498824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300014968\|Ga0157379_10037701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4311	Open in IMG/M
3300014968\|Ga0157379_10039635	All Organisms → cellular organisms → Bacteria	4203	Open in IMG/M
3300014969\|Ga0157376_10244268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1674	Open in IMG/M
3300015374\|Ga0132255_100132616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3445	Open in IMG/M
3300020082\|Ga0206353_10812776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1044	Open in IMG/M
3300025559\|Ga0210087_1046298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300025899\|Ga0207642_10154243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1226	Open in IMG/M
3300025900\|Ga0207710_10025592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2547	Open in IMG/M
3300025901\|Ga0207688_10125431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1501	Open in IMG/M
3300025901\|Ga0207688_11080914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300025903\|Ga0207680_10260670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1200	Open in IMG/M
3300025914\|Ga0207671_10125552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1965	Open in IMG/M
3300025917\|Ga0207660_10170022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1687	Open in IMG/M
3300025918\|Ga0207662_10024138	All Organisms → cellular organisms → Bacteria	3499	Open in IMG/M
3300025923\|Ga0207681_11749062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300025926\|Ga0207659_10675497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	884	Open in IMG/M
3300025927\|Ga0207687_10531577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300025934\|Ga0207686_10254298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1285	Open in IMG/M
3300025935\|Ga0207709_10046520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2634	Open in IMG/M
3300025935\|Ga0207709_11417159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300025936\|Ga0207670_11545413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300025937\|Ga0207669_10437301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1033	Open in IMG/M
3300025938\|Ga0207704_10510747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	970	Open in IMG/M
3300025941\|Ga0207711_10060707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3258	Open in IMG/M
3300025945\|Ga0207679_10544998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1040	Open in IMG/M
3300025949\|Ga0207667_10053245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4259	Open in IMG/M
3300025960\|Ga0207651_10538969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1013	Open in IMG/M
3300026078\|Ga0207702_10440979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1262	Open in IMG/M
3300026088\|Ga0207641_10064190	All Organisms → cellular organisms → Bacteria	3138	Open in IMG/M
3300026089\|Ga0207648_10085091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2759	Open in IMG/M
3300026095\|Ga0207676_10229549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1658	Open in IMG/M
3300028608\|Ga0247819_10938543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300030336\|Ga0247826_10933034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300031547\|Ga0310887_10264170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	966	Open in IMG/M
3300031940\|Ga0310901_10173518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	842	Open in IMG/M
3300032013\|Ga0310906_10383014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	924	Open in IMG/M
3300032075\|Ga0310890_10174629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1448	Open in IMG/M
3300032075\|Ga0310890_11497992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300032122\|Ga0310895_10083945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1260	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.94%
Environmental	Environmental	41.12%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	57.94%
Terrestrial	Environmental → Terrestrial	37.38%
Aquatic	Environmental → Aquatic	3.74%
Wastewater	Engineered → Wastewater	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	37.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.56%
Marine	Environmental → Aquatic → Marine	2.80%
Roots	Host-Associated → Plants → Roots	1.87%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.08%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.35%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.48%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.74%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012490	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24743J22301_100832641	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	RHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
JGI24742J22300_101178302	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	VRXPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERL
JGI25406J46586_100158054	3300003203	Tabebuia Heterophylla Rhizosphere	VTLPHDPGPHWGEVGIHGIHRQREWDVVATVPAREVEGDEAWFVLLTDGRAIVEEGSVDAVRLAEHVELAPPFRARAIRRDATLWAIAARRIETVELDEDPGGDAVEVSWDGVERTVRIDGRPTLAGVPELERLGERHARYVVTAARIDGRVWEVAVSPL*
Ga0055467_100387411	3300003996	Natural And Restored Wetlands	VVRAPHDPGPHWGEVGIHGLHRHREWDLVATADAPELDGEGEEAWFVVLDDDRIVVEDTTTDLSALRSAVALAPPFRAHAVRRGGSLWVVGARRIETVTLVDDPGGDAVELAWNGTERTVRIDGEPTLAGVPELERLAAARHRTYVVTASRLAGTTWEFSVSPL*
Ga0055465_100822581	3300004013	Natural And Restored Wetlands	APHDPGPHWGEVGIHGLHRHREWDLVATVDAPELDGEEAWFVVLDDDRIVVEDTTTDLSALRSAVALAPPFRAHAVRRGGSLWVVGARRIETVTLVDDPGGDAVELAWNGTERTVRIDGEPTLAGVPELERLAAARHRTYVVTASRLAGTTWEFSVSPL*
Ga0062591_1017843071	3300004643	Soil	WFVVLDSGDVVAEGGSVDARLVSSVALAAPFRAHAVRRDAGVWVVAASRIRTASLVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSTWEVFVAPL*
Ga0070683_1001036072	3300005329	Corn Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARIDGSTWEVFVAPL*
Ga0070670_1000470662	3300005331	Switchgrass Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0070670_1019094811	3300005331	Switchgrass Rhizosphere	LPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL*
Ga0070677_107193991	3300005333	Miscanthus Rhizosphere	DVVAEEGSIDARLVSSVALGAPFRAHAVRRGAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0070660_1010247111	3300005339	Corn Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSTWEVFVAPL*
Ga0070692_105479352	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VRLPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRS
Ga0070675_1008713781	3300005354	Miscanthus Rhizosphere	LHRHREWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSIDARLVSSVALGAPFRAHAVRRGAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSTWEVFVAPL*
Ga0070671_1000638382	3300005355	Switchgrass Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0070688_1001974763	3300005365	Switchgrass Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHA
Ga0070659_1004312202	3300005366	Corn Rhizosphere	DLVGEDVWFVVLDSGDVVAEGGSVDARLVSSVALAAPFRAHAVRRDAGVWVVAASRIRTASLVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSTWEVFVAPL*
Ga0070700_1004206982	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0070700_1004309422	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	TVDAPDLVGEDVWFVVLGPGEVVAEDGEIDARLVSSIALAAPFRAHAVRRDAGIWVVGASRIRTVALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGSERHTTYVVTAARLEGPVWEVFVAPL*
Ga0070662_1000773333	3300005457	Corn Rhizosphere	EDVWFVVLDSGDVVAEEGSIDARLVSSVALGAPFRAHAVRRGAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0070681_104535102	3300005458	Corn Rhizosphere	RRCRSRRSSRRSAPATEVRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0068867_1000505462	3300005459	Miscanthus Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGICVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0070704_1010087262	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VRLPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALKSSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERL
Ga0068870_101133301	3300005840	Miscanthus Rhizosphere	KVRLPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL*
Ga0081455_102861922	3300005937	Tabebuia Heterophylla Rhizosphere	VRQPHDPGPHWGEVGIHGLHRHREWDLVATVDAPDLSGDEAWFVVLEDGRVVIEEAAADPSALTSAVSLAPPFRAHAVRRDGSLWVVGARRIETVTLVDDPGGDAVELAWDGSERTVRIDGEPTLAGVAALEGLGASRHRSYVVTATRLVGAEWEVAVAPL*
Ga0075432_104773152	3300006058	Populus Rhizosphere	REWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSIDARLVSSVALGAPFRAHAVRRGAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSTWEVFVAPL*
Ga0068871_1024052921	3300006358	Miscanthus Rhizosphere	MTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVA
Ga0068865_1001064763	3300006881	Miscanthus Rhizosphere	RHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL*
Ga0075435_1017214191	3300007076	Populus Rhizosphere	FVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0105245_103601471	3300009098	Miscanthus Rhizosphere	VWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYV
Ga0105247_100388454	3300009101	Switchgrass Rhizosphere	VWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0105091_105734041	3300009146	Freshwater Sediment	LPLPHDPGPHWGEVGIHGLHRHREWDLVTTVESTGLAGDEAWFVGLPDGRVVTEEGMDDPSPLAEAVALAAPYRAHAVRRDVALWVIGARRIETVRLVEDPGGDAVELAWDGRERTVRIDGEPTLAGVPELERLASARHATYVV
Ga0105243_1000240814	3300009148	Miscanthus Rhizosphere	VRLPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL*
Ga0105243_100140235	3300009148	Miscanthus Rhizosphere	VWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0105241_109771232	3300009174	Corn Rhizosphere	VWDAVATVAAPDLVGEDVWFVVLDSGDVVAEGGSVDARLVSSVALAAPFRGHAVRRDAGIWVVGASRNRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAAL*
Ga0105242_100389754	3300009176	Miscanthus Rhizosphere	VRLPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAEAVRRDGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL*
Ga0105242_102681311	3300009176	Miscanthus Rhizosphere	VWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERYATYVVTAARLDGSIWEVFVAPL*
Ga0105248_100625193	3300009177	Switchgrass Rhizosphere	VWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLAGSIWEVFVAPL*
Ga0131077_108566452	3300009873	Wastewater	VRLPHDPGPHWGEVGIHGLHRHREWDVVATVDAPDLDGDEVTFVVLASGEVVVEQGVVDPRLAASIALAPPFRARAIRRDAGIWVVGATRIRTIVLADDPGGDAIELAWDGRERSVRIDGGPTLAGVPELERLGASRYATYVVTASRLSGATWEVFVAPL*
Ga0126377_100311333	3300010362	Tropical Forest Soil	VPLPHDPGPHWGEVGIHGLHRQREWDEVTVVEAPEVAGDDAWFVVLADGGILREEGAADPAVLAASLTLGPPLRAHAVRRDGALWAVGARRIETAELSRDPGGSRVELSWDGVERTVRIDGEPTLAGVPELERLGAARFGAYVVTAARLVGSIWEVAIAPL*
Ga0134125_109402382	3300010371	Terrestrial Soil	PHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSTWEVFVAPL*
Ga0134128_107271672	3300010373	Terrestrial Soil	VRLPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSSAYVVTAWRLVGSVWEVSVAPL*
Ga0105239_105377971	3300010375	Corn Rhizosphere	HGLHRHREWDAVATVAAPDLLDEDVWFVVLDSGDVVAEEGSVDARLVLSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0134127_111950012	3300010399	Terrestrial Soil	TEVRLPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGALVSEDGVGDHAALASSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL*
Ga0134123_100570243	3300010403	Terrestrial Soil	VWDAVATIAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRNRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0151490_16795501	3300011107	Soil	VRLPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAILADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL
Ga0157322_10175502	3300012490	Arabidopsis Rhizosphere	VWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTA
Ga0157342_10017242	3300012507	Arabidopsis Rhizosphere	VGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0157330_10150692	3300012514	Soil	VWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAKRHATYVVTAARIDGSTWEVFVAPL*
Ga0157295_100259052	3300012906	Soil	DVWFVVLGPGEVVAEDGEIDARLVSSIALAAPFRAHAVRRDAGIWVVGASRIRTVALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGSERHTTYVVTAARLEGPVWEVFVAPL*
Ga0157302_105672632	3300012915	Soil	APDLVGEDVWFVVLDSGDVVAEEGEIDARLVSSIALAAPFRGHAVRRDAGIWVVGAARIRTLTLADDPGGSSVELAWDGRERTVRIDGEPTLAGVPELERLGSERHATYVVTAARLEGSVWEVFVAPL*
Ga0164241_101795633	3300012943	Soil	EVVAEEGEIDARLVSSIALAAPFRAHAVRRDAGIWVVGASRLRTVALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGSERHTTYVVTAARLEGPVWEVFVAPL*
Ga0164241_102423641	3300012943	Soil	LDSGEVVAEEGEIDVRLVSSIALAAPFRAHAVRRDAGIWVVGASRIRTIGLVDDPGGSAVELAWDGRERTVRIDGEPTLVGVPELERLGAERHETYVVTAARLEGSTWEVFVAPL*
Ga0164300_100219752	3300012951	Soil	VRLPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAILADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL*
Ga0164300_111026601	3300012951	Soil	VDDATVDAPDLAGDEVWFVVLESGEVLPEDGELDARLTSSIALPPPFRAHAVRRDAGIWVVAASGIRTAVLADDPGGDAVWLAWDGRERSVRIDGAPRLAGVPELERLGAERHAAFVVTASRLRGSTWEVFVAPL*
Ga0164299_104684962	3300012958	Soil	VWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRHAAIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL
Ga0164299_107419472	3300012958	Soil	VRLPHDPGPYWGEVGIHGLHRHRQWDAVATVDAPLIAGDEMTFVVLEGGALVSEDGVGAPAALASSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL*
Ga0164302_100881212	3300012961	Soil	VRLPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYIVTAWRLVGSVWEVSVAPL*
Ga0164308_104520062	3300012985	Soil	VRLPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLIEGDEMTFVVLEGGALVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL*
Ga0164308_106396642	3300012985	Soil	VWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRNAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0164307_106733732	3300012987	Soil	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGDDVWFVVLESGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0164307_109852231	3300012987	Soil	VRLPHDPGPYWGEVGIHGLHRHRQWDAVATVDAPLIEGDEMTFVVLEGGALVSEDGVGDPAALASSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL*
Ga0157373_111810162	3300013100	Corn Rhizosphere	WFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGSERHTTYVVTAARLEGPVWEVFVAPL*
Ga0157369_109610521	3300013105	Corn Rhizosphere	HRHRVWDAVATVAAPDLVGEDVWFVVLGPGEVVAENGEIDARLVSSIALAAPFRAHAVRRDAGIWVVGASRIRTVALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGSERHTTYVVTAARLEGPVWEVFVAPL*
Ga0163162_101083153	3300013306	Switchgrass Rhizosphere	VRLPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALKSSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL*
Ga0163162_121099281	3300013306	Switchgrass Rhizosphere	PDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0163162_131902031	3300013306	Switchgrass Rhizosphere	LPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEGGSVDARLVSSVALAAPFRAHAVRRDAGVWVVAASRIRTASLVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSTWEVFVAPL*
Ga0163163_113166332	3300014325	Switchgrass Rhizosphere	VWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHA
Ga0182008_104988241	3300014497	Rhizosphere	VVAEEGEIDARLVSSIALAAPFRGHAVRRDAGIWVVGAARIRTLTLADDPGGSSVELAWDGRERTVRIDGEPTLAGVPELERLGSERHATYVVTAARLEGSVWEVFVAPL*
Ga0157379_100377013	3300014968	Switchgrass Rhizosphere	RWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL*
Ga0157379_100396352	3300014968	Switchgrass Rhizosphere	VWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGSERHTTYVVTAARLEGPVWEVFVAPL*
Ga0157376_102442683	3300014969	Miscanthus Rhizosphere	VWDAVAPVAAPDLVGEDVWFVVLDSGHVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0132255_1001326163	3300015374	Arabidopsis Rhizosphere	RLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL*
Ga0206353_108127761	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	GPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL
Ga0210087_10462981	3300025559	Natural And Restored Wetlands	VPLPHDPGPHWGEVGIHGLHRHREWDLVATADAPELDGEGEEAWFVVLDDDRIVVEDTTTDLSALRSAVALAPPFRAHAVRRGGSLWVVGARRIETVTLVDDPGGDAVELAWNGTERTVRIDGEPTLAGVPELERLAAARHRTYVVTASRLAGTTWEFSVSPL
Ga0207642_101542432	3300025899	Miscanthus Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL
Ga0207710_100255921	3300025900	Switchgrass Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVF
Ga0207688_101254311	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL
Ga0207688_110809141	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	GEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL
Ga0207680_102606701	3300025903	Switchgrass Rhizosphere	SRGAARRPPSTPSRCRSRRSSRFCAPATEVPLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGSERHTTYVVTAARLEGPVWEVFVAPL
Ga0207671_101255522	3300025914	Corn Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGEIDARLVSSIALAAPFRGHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGSERHTTYVVTAARLEGPVWEVFVAPL
Ga0207660_101700223	3300025917	Corn Rhizosphere	ATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSTWEVFVAPL
Ga0207662_100241381	3300025918	Switchgrass Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPEL
Ga0207681_117490622	3300025923	Switchgrass Rhizosphere	TVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL
Ga0207659_106754971	3300025926	Miscanthus Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSTWEVFVAPL
Ga0207687_105315773	3300025927	Miscanthus Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAE
Ga0207686_102542983	3300025934	Miscanthus Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGA
Ga0207709_100465201	3300025935	Miscanthus Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERH
Ga0207709_114171592	3300025935	Miscanthus Rhizosphere	EDVWFVVLGPGEVVAEDGEIDARLVSSIALAAPFRAHAVRRDAGIWVVGASRIRTVALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGSERHTTYVVTAARLEGPVWEVFVAPL
Ga0207670_115454132	3300025936	Switchgrass Rhizosphere	EVRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL
Ga0207669_104373012	3300025937	Miscanthus Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGHVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL
Ga0207704_105107471	3300025938	Miscanthus Rhizosphere	RSRRSSRRSAAPTEVRLPHDPGPYWGEVGIHGLHRHRRWDAVATVDAPLVEGDEMTFVVLEGGAVVSEDGVGDPAALESSVALAPPFRAQAVRREGGIWVVGATRIRTAVLADDPGGDRVEIAWDGTERSVRIDGTPTLAGVPDLERLGASRSPAYVVTAWRLVGSVWEVSVAPL
Ga0207711_100607071	3300025941	Switchgrass Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIW
Ga0207679_105449981	3300025945	Corn Rhizosphere	RCRSRRSSRRSAPATEVRPPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL
Ga0207667_100532453	3300025949	Corn Rhizosphere	EDVWFVVLGPGEVVAENGEIDARLVSSIALAAPFRAHAVRRDAGIWVVGASRIRTVALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGSERHTTYVVTAARLEGPVWEVFVAPL
Ga0207651_105389693	3300025960	Switchgrass Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVA
Ga0207702_104409791	3300026078	Corn Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLA
Ga0207641_100641901	3300026088	Switchgrass Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLD
Ga0207648_100850913	3300026089	Miscanthus Rhizosphere	VRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVAIAAPFRAHAVRRDAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL
Ga0207676_102295492	3300026095	Switchgrass Rhizosphere	RRSAPATEVRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL
Ga0247819_109385431	3300028608	Soil	VWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL
Ga0247826_109330342	3300030336	Soil	PQSPLRRCRSRRSSRRSAPATEVRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTTALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL
Ga0310887_102641701	3300031547	Soil	GEDVWFVVLDSGDVVAEEGSIDARLVSSVALGAPFRAHAVRRGAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSTWEVFVAPL
Ga0310901_101735182	3300031940	Soil	DVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGIPELERLGAERHATYVVTAARLDGSIWEVFVAP
Ga0310906_103830142	3300032013	Soil	AAPDLLGEDAWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGVWVVAASRIRTASLVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSTWEVFVAPL
Ga0310890_101746292	3300032075	Soil	LDSGDVVAEEGSIDARLVSSVALGAPFRAHAVRRGAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSTWEVFVAPL
Ga0310890_114979921	3300032075	Soil	EVRLPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSTWEVFVAPL
Ga0310895_100839453	3300032122	Soil	VRPPHDPGPHWGEVGIHGLHRHRVWDAVATVAAPDLVGEDVWFVVLDSGDVVAEEGSVDARLVSSVALAAPFRAHAVRRDAGIWVVGASRIRTAALVDDPGGSSVELAWDGRERSVRIDGEPTLAGVPELERLGAERHATYVVTAARLDGSIWEVFVAPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092123

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences