Metagenome / Metatranscriptome Family F092097

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092097
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	44 residues
Representative Sequence	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQ
Number of Associated Samples	59
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	78.50 %
% of genes near scaffold ends (potentially truncated)	39.25 %
% of genes from short scaffolds (< 2000 bps)	87.85 %
Associated GOLD sequencing projects	39
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Predicted Viral (35.514 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (79.439 % of family members)
Environment Ontology (ENVO)	Unclassified (81.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (85.981 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 88.64% β-sheet: 0.00% Coil/Unstructured: 11.36%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02511	Thy1	3.74
PF00589	Phage_integrase	2.80
PF13619	KTSC	1.87
PF14700	RPOL_N	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	3.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.24 %
Unclassified	root	N/A	17.76 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	58.88 %
cellular organisms	root	All Organisms → cellular organisms	23.36 %
Unclassified	root	N/A	17.76 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.51 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.36 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	19.63 %
Unclassified	root	N/A	17.76 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.36 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	19.63 %
Unclassified	root	N/A	17.76 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.51 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.36 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	19.63 %
Unclassified	root	N/A	17.76 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.51 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	23.36 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	19.63 %
Unclassified	root	N/A	17.76 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.51 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	23.36 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	19.63 %
Unclassified	root	N/A	17.76 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.51 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	23.36 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	17.76 %
Unclassified	root	N/A	17.76 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1.87 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.51 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	23.36 %
Unclassified	root	N/A	17.76 %
Poseidonvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus	12.15 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1.87 %
unclassified Autographiviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.51 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	23.36 %
Unclassified	root	N/A	17.76 %
Synechococcus virus SCBP4	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	12.15 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1.87 %
Synechococcus phage S-SRP01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae → Synechococcus phage S-SRP01	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	35.51 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	23.36 %
Unclassified	root	N/A	17.76 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1.87 %
Synechococcus phage S-CBP4	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4 → Synechococcus phage S-CBP4	0.93 %
Synechococcus phage S-SRP01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae → Synechococcus phage S-SRP01	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10069876	All Organisms → Viruses → Predicted Viral	1433	Open in IMG/M
3300002835\|B570J40625_100151088	Not Available	2650	Open in IMG/M
3300006025\|Ga0075474_10054092	All Organisms → Viruses → Predicted Viral	1353	Open in IMG/M
3300006025\|Ga0075474_10140741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	761	Open in IMG/M
3300006026\|Ga0075478_10019765	All Organisms → Viruses → Predicted Viral	2273	Open in IMG/M
3300006026\|Ga0075478_10202625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	606	Open in IMG/M
3300006026\|Ga0075478_10260136	Not Available	519	Open in IMG/M
3300006403\|Ga0075514_1764726	All Organisms → Viruses → Predicted Viral	1084	Open in IMG/M
3300006637\|Ga0075461_10199384	Not Available	600	Open in IMG/M
3300006802\|Ga0070749_10189907	All Organisms → Viruses → Predicted Viral	1180	Open in IMG/M
3300006802\|Ga0070749_10526955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	642	Open in IMG/M
3300006810\|Ga0070754_10193046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	952	Open in IMG/M
3300006810\|Ga0070754_10243848	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	823	Open in IMG/M
3300006810\|Ga0070754_10319960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	692	Open in IMG/M
3300006810\|Ga0070754_10326060	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	684	Open in IMG/M
3300006810\|Ga0070754_10428376	Not Available	576	Open in IMG/M
3300006810\|Ga0070754_10431479	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	573	Open in IMG/M
3300006867\|Ga0075476_10226267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	674	Open in IMG/M
3300006869\|Ga0075477_10378157	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	553	Open in IMG/M
3300006870\|Ga0075479_10318234	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	608	Open in IMG/M
3300006874\|Ga0075475_10258206	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	729	Open in IMG/M
3300006916\|Ga0070750_10223067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	827	Open in IMG/M
3300006916\|Ga0070750_10312922	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	669	Open in IMG/M
3300006916\|Ga0070750_10384656	Not Available	588	Open in IMG/M
3300006916\|Ga0070750_10434112	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	545	Open in IMG/M
3300006919\|Ga0070746_10206382	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	934	Open in IMG/M
3300006919\|Ga0070746_10293273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	749	Open in IMG/M
3300007236\|Ga0075463_10077101	All Organisms → Viruses → Predicted Viral	1075	Open in IMG/M
3300007344\|Ga0070745_1114465	All Organisms → Viruses → Predicted Viral	1044	Open in IMG/M
3300007344\|Ga0070745_1153623	Not Available	871	Open in IMG/M
3300007344\|Ga0070745_1246507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	647	Open in IMG/M
3300007346\|Ga0070753_1272248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	610	Open in IMG/M
3300007539\|Ga0099849_1111254	All Organisms → Viruses → Predicted Viral	1084	Open in IMG/M
3300007539\|Ga0099849_1174682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	820	Open in IMG/M
3300007539\|Ga0099849_1242200	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	665	Open in IMG/M
3300007640\|Ga0070751_1127285	All Organisms → Viruses → Predicted Viral	1034	Open in IMG/M
3300008012\|Ga0075480_10369533	All Organisms → Viruses	713	Open in IMG/M
3300009001\|Ga0102963_1311556	Not Available	619	Open in IMG/M
3300010297\|Ga0129345_1299816	Not Available	557	Open in IMG/M
3300010389\|Ga0136549_10090944	All Organisms → Viruses → Predicted Viral	1459	Open in IMG/M
3300017967\|Ga0181590_10310158	All Organisms → Viruses → Predicted Viral	1145	Open in IMG/M
3300017969\|Ga0181585_10930001	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	557	Open in IMG/M
3300018424\|Ga0181591_10216587	All Organisms → Viruses → Predicted Viral	1498	Open in IMG/M
3300019726\|Ga0193974_1020463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	751	Open in IMG/M
3300019756\|Ga0194023_1057161	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	784	Open in IMG/M
3300019765\|Ga0194024_1046448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	959	Open in IMG/M
3300019765\|Ga0194024_1051186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	915	Open in IMG/M
3300019937\|Ga0194022_1006280	All Organisms → Viruses → Predicted Viral	1541	Open in IMG/M
3300020498\|Ga0208050_1001091	All Organisms → Viruses	3906	Open in IMG/M
3300021364\|Ga0213859_10448400	Not Available	566	Open in IMG/M
3300021958\|Ga0222718_10096278	All Organisms → Viruses → Predicted Viral	1753	Open in IMG/M
3300021958\|Ga0222718_10191095	All Organisms → Viruses → Predicted Viral	1124	Open in IMG/M
3300021958\|Ga0222718_10382772	Not Available	707	Open in IMG/M
3300022050\|Ga0196883_1000467	All Organisms → Viruses → Predicted Viral	4297	Open in IMG/M
3300022050\|Ga0196883_1001532	All Organisms → Viruses → Predicted Viral	2562	Open in IMG/M
3300022050\|Ga0196883_1004645	All Organisms → Viruses → Predicted Viral	1585	Open in IMG/M
3300022050\|Ga0196883_1005954	All Organisms → Viruses → Predicted Viral	1415	Open in IMG/M
3300022050\|Ga0196883_1011751	All Organisms → Viruses → Predicted Viral	1038	Open in IMG/M
3300022050\|Ga0196883_1016326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	887	Open in IMG/M
3300022050\|Ga0196883_1018389	Not Available	838	Open in IMG/M
3300022057\|Ga0212025_1020203	All Organisms → Viruses → Predicted Viral	1075	Open in IMG/M
3300022065\|Ga0212024_1076925	Not Available	593	Open in IMG/M
3300022067\|Ga0196895_1007723	All Organisms → Viruses → Predicted Viral	1144	Open in IMG/M
3300022068\|Ga0212021_1136387	Not Available	501	Open in IMG/M
3300022149\|Ga0196907_108661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	547	Open in IMG/M
3300022158\|Ga0196897_1031894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	634	Open in IMG/M
3300022168\|Ga0212027_1022011	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	866	Open in IMG/M
3300022183\|Ga0196891_1090663	All Organisms → Viruses	539	Open in IMG/M
3300022187\|Ga0196899_1054761	All Organisms → Viruses → Predicted Viral	1294	Open in IMG/M
3300022187\|Ga0196899_1079550	All Organisms → Viruses → Predicted Viral	1006	Open in IMG/M
3300022187\|Ga0196899_1081857	All Organisms → Viruses	986	Open in IMG/M
3300022187\|Ga0196899_1136684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	692	Open in IMG/M
3300022187\|Ga0196899_1155953	Not Available	631	Open in IMG/M
3300022187\|Ga0196899_1175276	Not Available	581	Open in IMG/M
3300022187\|Ga0196899_1195149	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4 → Synechococcus phage S-CBP4	538	Open in IMG/M
3300022198\|Ga0196905_1157945	Not Available	581	Open in IMG/M
3300023180\|Ga0255768_10487119	Not Available	628	Open in IMG/M
3300025610\|Ga0208149_1016165	All Organisms → Viruses → Predicted Viral	2175	Open in IMG/M
3300025653\|Ga0208428_1013889	All Organisms → Viruses → Predicted Viral	2754	Open in IMG/M
3300025653\|Ga0208428_1150417	Not Available	624	Open in IMG/M
3300025671\|Ga0208898_1013977	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	3837	Open in IMG/M
3300025671\|Ga0208898_1014690	All Organisms → Viruses → Predicted Viral	3711	Open in IMG/M
3300025671\|Ga0208898_1064909	All Organisms → Viruses → Predicted Viral	1243	Open in IMG/M
3300025671\|Ga0208898_1074087	All Organisms → Viruses → Predicted Viral	1121	Open in IMG/M
3300025671\|Ga0208898_1077517	All Organisms → Viruses → Predicted Viral	1081	Open in IMG/M
3300025674\|Ga0208162_1013512	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	3328	Open in IMG/M
3300025674\|Ga0208162_1063991	All Organisms → Viruses → Predicted Viral	1185	Open in IMG/M
3300025759\|Ga0208899_1035606	All Organisms → Viruses → Predicted Viral	2280	Open in IMG/M
3300025759\|Ga0208899_1090560	All Organisms → Viruses → Predicted Viral	1166	Open in IMG/M
3300025759\|Ga0208899_1142014	Not Available	833	Open in IMG/M
3300025769\|Ga0208767_1115260	All Organisms → Viruses → Predicted Viral	1043	Open in IMG/M
3300025769\|Ga0208767_1144661	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	875	Open in IMG/M
3300025769\|Ga0208767_1162649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	797	Open in IMG/M
3300025769\|Ga0208767_1175579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	748	Open in IMG/M
3300025840\|Ga0208917_1017100	All Organisms → Viruses → Predicted Viral	3122	Open in IMG/M
3300025853\|Ga0208645_1055281	All Organisms → Viruses → Predicted Viral	1864	Open in IMG/M
3300025853\|Ga0208645_1132217	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	977	Open in IMG/M
3300025853\|Ga0208645_1162167	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	836	Open in IMG/M
3300025853\|Ga0208645_1209249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	683	Open in IMG/M
3300025889\|Ga0208644_1090945	All Organisms → Viruses → Predicted Viral	1530	Open in IMG/M
3300025889\|Ga0208644_1103863	All Organisms → Viruses → Predicted Viral	1392	Open in IMG/M
3300027917\|Ga0209536_101856752	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae → Synechococcus phage S-SRP01	725	Open in IMG/M
3300032136\|Ga0316201_11288561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	609	Open in IMG/M
3300034106\|Ga0335036_0073845	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	2550	Open in IMG/M
3300034374\|Ga0348335_109046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	848	Open in IMG/M
3300034374\|Ga0348335_145272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	658	Open in IMG/M
3300034418\|Ga0348337_122277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	795	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	90.65%
Freshwater	Environmental → Aquatic → Freshwater	7.48%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.93%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	82.24%
River	Environmental → Aquatic → Freshwater → River	3.74%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.74%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.80%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.93%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.93%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	81.31%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.74%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	3.74%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.80%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.93%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.93%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.93%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	79.44%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.74%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.74%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.80%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.93%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.93%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.93%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.93%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.93%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.93%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.93%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006403	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019726	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_10-11_MG	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300019937	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW29Aug16_MG	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021364	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300022050	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022067	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v3)	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022149	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (v3)	Environmental	Open in IMG/M
3300022158	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)	Environmental	Open in IMG/M
3300022168	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)	Environmental	Open in IMG/M
3300022183	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025840	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300032136	Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrow	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100698761	3300000116	Marine	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA*
B570J40625_1001510887	3300002835	Freshwater	MKYNHQQLKDLEDQFLKDFHRGLLTRTQLLNIIHRLDRISHHL*
Ga0075474_100540921	3300006025	Aqueous	MMYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEVSTTK*
Ga0075474_101407411	3300006025	Aqueous	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEIASTK*
Ga0075478_100197656	3300006026	Aqueous	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEIASTR*
Ga0075478_102026252	3300006026	Aqueous	MYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHEIASTK*
Ga0075478_102601364	3300006026	Aqueous	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHE
Ga0075514_17647261	3300006403	Aqueous	MYTTQELKDLESTAIRDYQRGLLTKTQLLNIIHRLD
Ga0075461_101993841	3300006637	Aqueous	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEIAST
Ga0070749_101899073	3300006802	Aqueous	MYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHEL*
Ga0070749_105269552	3300006802	Aqueous	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDR
Ga0070754_101930465	3300006810	Aqueous	MYTTQELKELEATAIRDHQRGLLTKTQLLNIIHRLDRISHHEIASTK*
Ga0070754_102438481	3300006810	Aqueous	LEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA*
Ga0070754_103199603	3300006810	Aqueous	MTYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRI
Ga0070754_103260602	3300006810	Aqueous	CLMYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGT*
Ga0070754_104283763	3300006810	Aqueous	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRL
Ga0070754_104314791	3300006810	Aqueous	YTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHEL*
Ga0075476_102262673	3300006867	Aqueous	MYTTQELKELEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGT*
Ga0075477_103781572	3300006869	Aqueous	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGT*
Ga0075479_103182341	3300006870	Aqueous	MYTTQELKELEATAIRDHQRGLLTRTQLLNIIHRLDRISHHEIASTK*
Ga0075475_102582062	3300006874	Aqueous	MYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHEVSTPK*
Ga0070750_102230671	3300006916	Aqueous	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLD
Ga0070750_103129221	3300006916	Aqueous	MYTTQELKDLEATAIRDHQRGLLTKTQLLNIIHRLDRISHHELQDS*
Ga0070750_103846562	3300006916	Aqueous	MYTTQKLKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA*
Ga0070750_104341123	3300006916	Aqueous	QELKDLEATAIRDHQRGLLTKTQLLNIIHRLDRISHHEL*
Ga0070746_102063825	3300006919	Aqueous	MMYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHEVSTPR*
Ga0070746_102932731	3300006919	Aqueous	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEVST
Ga0075463_100771014	3300007236	Aqueous	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRIS
Ga0070745_11144653	3300007344	Aqueous	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHERTSNH*
Ga0070745_11536235	3300007344	Aqueous	MYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHE
Ga0070745_12465073	3300007344	Aqueous	MYTTQKLKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHEL
Ga0070753_12722481	3300007346	Aqueous	MYTAQEVKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQG
Ga0099849_11112544	3300007539	Aqueous	MYTTQELKNLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA*
Ga0099849_11746823	3300007539	Aqueous	MMYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDR
Ga0099849_12422002	3300007539	Aqueous	MMYTAQQLKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA*
Ga0070751_11272851	3300007640	Aqueous	MYTAQEVKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA
Ga0075480_103695331	3300008012	Aqueous	KELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEIASTK*
Ga0102963_13115562	3300009001	Pond Water	MNEQTLKDLEDQALRDHKRGLLTRTQLLNIIHRLD
Ga0129345_12998163	3300010297	Freshwater To Marine Saline Gradient	MYTTQELKDLEVTAIRDYQRGLLTKIQLLNIIHRLDRISHHELQGA*
Ga0136549_100909441	3300010389	Marine Methane Seep Sediment	MSYTHKQLRELEAQAIEDHRRGLLTRAQLLRIIHRLDRISWITV*
Ga0181590_103101583	3300017967	Salt Marsh	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHERTSNH
Ga0181585_109300012	3300017969	Salt Marsh	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEIASTK
Ga0181591_102165876	3300018424	Salt Marsh	MMYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEIA
Ga0193974_10204632	3300019726	Sediment	MMYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGS
Ga0194023_10571612	3300019756	Freshwater	MTYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEISTPK
Ga0194024_10464482	3300019765	Freshwater	MYTTQELKELEATAIRDHQRGLLTKTQLLNIIHRLDRISHHEIASTK
Ga0194024_10511861	3300019765	Freshwater	MYTAQELKNLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA
Ga0194022_10062807	3300019937	Freshwater	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEVSTTK
Ga0208050_10010918	3300020498	Freshwater	MKYNHQQLKDLEDQFLKDFHRGLLTRTQLLNIIHRLDRISHHL
Ga0213859_104484002	3300021364	Seawater	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQDS
Ga0222718_100962784	3300021958	Estuarine Water	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEVSTPK
Ga0222718_101910952	3300021958	Estuarine Water	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEISTPK
Ga0222718_103827721	3300021958	Estuarine Water	MYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHEITTTK
Ga0196883_10004675	3300022050	Aqueous	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEIASTR
Ga0196883_10015329	3300022050	Aqueous	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHH
Ga0196883_10046451	3300022050	Aqueous	MYTTQELKELEATAIRDYQRGLLTKTQLLNIIHRLDRISHHEIATTK
Ga0196883_10059545	3300022050	Aqueous	MMYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEVSTPK
Ga0196883_10117511	3300022050	Aqueous	LMYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA
Ga0196883_10163262	3300022050	Aqueous	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGS
Ga0196883_10183891	3300022050	Aqueous	MMYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEVSTTK
Ga0212025_10202034	3300022057	Aqueous	MMYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEIASTK
Ga0212024_10769251	3300022065	Aqueous	MYTTQELKDLEVTAIRDYQRGLLTKTQLLNIIHRLDR
Ga0196895_10077231	3300022067	Aqueous	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEIASTKW
Ga0212021_11363873	3300022068	Aqueous	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEVSTP
Ga0196907_1086612	3300022149	Aqueous	MMYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA
Ga0196897_10318942	3300022158	Aqueous	MYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHEVSTTK
Ga0212027_10220111	3300022168	Aqueous	MYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRI
Ga0196891_10906633	3300022183	Aqueous	YTTQELKDLEATAIRDYQRGLLTRTQLLNIIHRLDRISHHELQGA
Ga0196899_10547614	3300022187	Aqueous	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHE
Ga0196899_10795502	3300022187	Aqueous	MYTSQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA
Ga0196899_10818574	3300022187	Aqueous	GCLMYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGT
Ga0196899_11366842	3300022187	Aqueous	MMYTAQEVKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA
Ga0196899_11559533	3300022187	Aqueous	MMYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRI
Ga0196899_11752761	3300022187	Aqueous	MYTTQELKELEATAIRDHQRGLLTRTQLLNIIHRLDRISHHEIASTK
Ga0196899_11951493	3300022187	Aqueous	GGCMMYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEVSTPK
Ga0196905_11579452	3300022198	Aqueous	MNEQTLKDLEDQALRDHKRGLLTRTQLLNIIHRLDRLSHH
Ga0255768_104871191	3300023180	Salt Marsh	MNEQTLKDLEDQALRDHKRGLLTRTQLLNIIHRLDRLS
Ga0208149_10161659	3300025610	Aqueous	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA
Ga0208428_10138891	3300025653	Aqueous	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQG
Ga0208428_11504171	3300025653	Aqueous	MYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHEVSTPK
Ga0208898_10139776	3300025671	Aqueous	MYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEIASTRXATRFARP
Ga0208898_10146907	3300025671	Aqueous	MYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHEIASTK
Ga0208898_10649095	3300025671	Aqueous	MYTTQELKDLEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEIASTR
Ga0208898_10740874	3300025671	Aqueous	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRI
Ga0208898_10775171	3300025671	Aqueous	MYTTQELKDLESTAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA
Ga0208162_101351210	3300025674	Aqueous	MNEQTLKELEDQALRDHKRGLLTRTQLLNIIHRLDRISHHE
Ga0208162_10639912	3300025674	Aqueous	MYTTQELKNLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA
Ga0208899_10356067	3300025759	Aqueous	MYTTQELKDLEATAIRDHQRGLLTKTQLLNIIHRLDRISHHELQDS
Ga0208899_10905602	3300025759	Aqueous	MYTAQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA
Ga0208899_11420145	3300025759	Aqueous	MYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISH
Ga0208767_11152603	3300025769	Aqueous	MYTTQELKDLEATAIRDYRRGLLTKTQLLNIIHRLDRISHHEL
Ga0208767_11446611	3300025769	Aqueous	MMYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHEVSTPR
Ga0208767_11626491	3300025769	Aqueous	MYTTQELKDLEVTAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGS
Ga0208767_11755794	3300025769	Aqueous	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQ
Ga0208917_10171007	3300025840	Aqueous	MMYTTQELKDLEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEVSTTK
Ga0208645_10552816	3300025853	Aqueous	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGT
Ga0208645_11322171	3300025853	Aqueous	MYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISH
Ga0208645_11621673	3300025853	Aqueous	MYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHEL
Ga0208645_12092493	3300025853	Aqueous	MTYTTQELKELEATAIRDRQRGLLTRTQLLNIIHRLDRISHHEVSTPK
Ga0208644_10909455	3300025889	Aqueous	MYTTQELKDLEVTAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA
Ga0208644_11038632	3300025889	Aqueous	MTYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHEIASTR
Ga0209536_1018567521	3300027917	Marine Sediment	MYTTQELKDLEVTAIRDYQRGLLTKTQLLNIIHRLDRISHHELQ
Ga0316201_112885611	3300032136	Worm Burrow	MMYTTQELKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHH
Ga0335036_0073845_1_117	3300034106	Freshwater	QQLKDLEDQFLKDFHRGLLTRTQLLNIIHRLDRISHHL
Ga0348335_109046_68_208	3300034374	Aqueous	MYTTQELKDLEVTAIRDYQRGLLTKTQLLNIIHRLDRISHHELQDS
Ga0348335_145272_49_192	3300034374	Aqueous	MYTTQELKELEATAIRDRQRGLLTQTQLLNIIHRLDRISHHEVSTPR
Ga0348337_122277_630_770	3300034418	Aqueous	MYTTQKLKDLEATAIRDYQRGLLTKTQLLNIIHRLDRISHHELQGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092097

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences