NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F092096

Metagenome / Metatranscriptome Family F092096

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092096
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 48 residues
Representative Sequence ENNQSVNVEGPNIVINIPEQKTETKTIIKEVKVPVEKKKEKEQEIDW
Number of Associated Samples 96
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.93 %
% of genes near scaffold ends (potentially truncated) 99.07 %
% of genes from short scaffolds (< 2000 bps) 90.65 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (80.374 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(29.907 % of family members)
Environment Ontology (ENVO) Unclassified
(38.318 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.589 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 25.53%    Coil/Unstructured: 74.47%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF08299Bac_DnaA_C 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A80.37 %
All OrganismsrootAll Organisms19.63 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000168|LPjun09P1210mDRAFT_c1018164Not Available561Open in IMG/M
3300000224|SI34jun09_10mDRAFT_1011482All Organisms → Viruses → Predicted Viral1735Open in IMG/M
3300000225|SI34jun09_120mDRAFT_1038576Not Available1030Open in IMG/M
3300000239|SI36aug09_120mDRAFT_1086277Not Available523Open in IMG/M
3300000930|BpDRAFT_10042246Not Available543Open in IMG/M
3300002154|JGI24538J26636_10030945Not Available1308Open in IMG/M
3300005523|Ga0066865_10039931Not Available1604Open in IMG/M
3300006404|Ga0075515_10629599Not Available517Open in IMG/M
3300006425|Ga0075486_1782536Not Available690Open in IMG/M
3300007539|Ga0099849_1078395All Organisms → Viruses → Predicted Viral1340Open in IMG/M
3300007554|Ga0102820_1095426Not Available714Open in IMG/M
3300007637|Ga0102906_1174990Not Available581Open in IMG/M
3300007647|Ga0102855_1031350All Organisms → Viruses → Predicted Viral1459Open in IMG/M
3300007862|Ga0105737_1074395Not Available841Open in IMG/M
3300008961|Ga0102887_1220708Not Available576Open in IMG/M
3300009000|Ga0102960_1210575Not Available692Open in IMG/M
3300009002|Ga0102810_1179787Not Available650Open in IMG/M
3300009080|Ga0102815_10907931Not Available504Open in IMG/M
3300009124|Ga0118687_10383971Not Available540Open in IMG/M
3300009193|Ga0115551_1273646Not Available742Open in IMG/M
3300009437|Ga0115556_1027989All Organisms → Viruses → Predicted Viral2546Open in IMG/M
3300009512|Ga0115003_10622637Not Available629Open in IMG/M
3300010148|Ga0098043_1031105Not Available1679Open in IMG/M
3300012920|Ga0160423_11050786Not Available545Open in IMG/M
3300012928|Ga0163110_10713180Not Available783Open in IMG/M
3300012936|Ga0163109_11365807Not Available516Open in IMG/M
3300017706|Ga0181377_1056726Not Available736Open in IMG/M
3300017725|Ga0181398_1115868Not Available639Open in IMG/M
3300017726|Ga0181381_1096370Not Available628Open in IMG/M
3300017743|Ga0181402_1038496All Organisms → Viruses → Predicted Viral1313Open in IMG/M
3300017756|Ga0181382_1142902Not Available628Open in IMG/M
3300017758|Ga0181409_1037431Not Available1521Open in IMG/M
3300017764|Ga0181385_1023276All Organisms → Viruses → Predicted Viral1976Open in IMG/M
3300017767|Ga0181406_1045651All Organisms → Viruses → Predicted Viral1358Open in IMG/M
3300017772|Ga0181430_1136170Not Available718Open in IMG/M
3300017818|Ga0181565_10456917Not Available835Open in IMG/M
3300017818|Ga0181565_10580522Not Available721Open in IMG/M
3300017818|Ga0181565_10611357Not Available698Open in IMG/M
3300017824|Ga0181552_10046657Not Available2563Open in IMG/M
3300017951|Ga0181577_10431468Not Available834Open in IMG/M
3300017952|Ga0181583_10005346Not Available9459Open in IMG/M
3300017957|Ga0181571_10429107Not Available815Open in IMG/M
3300017957|Ga0181571_10430382Not Available814Open in IMG/M
3300017962|Ga0181581_10619950Not Available657Open in IMG/M
3300017985|Ga0181576_10230547Not Available1200Open in IMG/M
3300017985|Ga0181576_10363868Not Available909Open in IMG/M
3300017985|Ga0181576_10953846Not Available500Open in IMG/M
3300018041|Ga0181601_10324109Not Available845Open in IMG/M
3300018048|Ga0181606_10422687Not Available708Open in IMG/M
3300019280|Ga0182068_1750661Not Available610Open in IMG/M
3300020051|Ga0181555_1179415Not Available833Open in IMG/M
3300020053|Ga0181595_10194508Not Available896Open in IMG/M
3300020174|Ga0181603_10036617All Organisms → Viruses → Predicted Viral2662Open in IMG/M
3300020191|Ga0181604_10240109Not Available855Open in IMG/M
3300020194|Ga0181597_10248425Not Available826Open in IMG/M
3300020274|Ga0211658_1109523Not Available539Open in IMG/M
3300021350|Ga0206692_1272927Not Available633Open in IMG/M
3300021364|Ga0213859_10012572Not Available3868Open in IMG/M
3300021364|Ga0213859_10122378All Organisms → Viruses → Predicted Viral1230Open in IMG/M
3300021378|Ga0213861_10063404Not Available2320Open in IMG/M
3300021389|Ga0213868_10229255Not Available1097Open in IMG/M
3300021957|Ga0222717_10111546All Organisms → Viruses → Predicted Viral1701Open in IMG/M
3300021957|Ga0222717_10600832Not Available577Open in IMG/M
3300021959|Ga0222716_10673474Not Available553Open in IMG/M
3300022369|Ga0210310_1026402Not Available603Open in IMG/M
(restricted) 3300022916|Ga0233431_1344978Not Available502Open in IMG/M
(restricted) 3300022920|Ga0233426_10402335Not Available507Open in IMG/M
3300022921|Ga0255765_1062646All Organisms → Viruses → Predicted Viral2108Open in IMG/M
3300022925|Ga0255773_10043928All Organisms → Viruses → Predicted Viral2734Open in IMG/M
3300022927|Ga0255769_10312255Not Available633Open in IMG/M
3300022934|Ga0255781_10441437Not Available539Open in IMG/M
3300022937|Ga0255770_10211958Not Available962Open in IMG/M
3300022939|Ga0255754_10162987Not Available1154Open in IMG/M
3300022939|Ga0255754_10388386Not Available629Open in IMG/M
3300022939|Ga0255754_10506136Not Available514Open in IMG/M
3300023084|Ga0255778_10409643Not Available582Open in IMG/M
3300023087|Ga0255774_10096107Not Available1705Open in IMG/M
3300023116|Ga0255751_10070222All Organisms → Viruses → Predicted Viral2296Open in IMG/M
3300023119|Ga0255762_10420261Not Available652Open in IMG/M
3300024183|Ga0228603_1003601All Organisms → Viruses → Predicted Viral1858Open in IMG/M
3300024223|Ga0228601_1054033Not Available556Open in IMG/M
3300024237|Ga0228653_1015027All Organisms → Viruses → Predicted Viral1853Open in IMG/M
3300024242|Ga0228673_1037054Not Available864Open in IMG/M
(restricted) 3300024255|Ga0233438_10063617All Organisms → Viruses → Predicted Viral1809Open in IMG/M
3300024294|Ga0228664_1031198All Organisms → Viruses → Predicted Viral1417Open in IMG/M
3300024332|Ga0228659_1058741Not Available856Open in IMG/M
3300024343|Ga0244777_10233788All Organisms → Viruses → Predicted Viral1173Open in IMG/M
3300024348|Ga0244776_10946052Not Available506Open in IMG/M
3300025666|Ga0209601_1142469Not Available675Open in IMG/M
3300025701|Ga0209771_1196513Not Available586Open in IMG/M
3300025816|Ga0209193_1031562Not Available1580Open in IMG/M
3300025830|Ga0209832_1064022Not Available1262Open in IMG/M
3300025849|Ga0209603_1313944Not Available542Open in IMG/M
3300025849|Ga0209603_1340932Not Available510Open in IMG/M
3300026183|Ga0209932_1010008All Organisms → Viruses → Predicted Viral2600Open in IMG/M
3300026183|Ga0209932_1094918Not Available665Open in IMG/M
3300026479|Ga0228622_1019098All Organisms → Viruses → Predicted Viral1956Open in IMG/M
3300026483|Ga0228620_1020997All Organisms → Viruses → Predicted Viral1658Open in IMG/M
3300027250|Ga0208310_1037475Not Available742Open in IMG/M
3300027788|Ga0209711_10336118Not Available641Open in IMG/M
3300028132|Ga0228649_1159048Not Available534Open in IMG/M
3300028136|Ga0228608_1161048Not Available600Open in IMG/M
3300028297|Ga0228617_1155831Not Available506Open in IMG/M
3300029293|Ga0135211_1031926Not Available640Open in IMG/M
3300029306|Ga0135212_1025379Not Available621Open in IMG/M
3300031766|Ga0315322_10903264Not Available536Open in IMG/M
3300031774|Ga0315331_10699144Not Available716Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh29.91%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater14.02%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine9.35%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater7.48%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine6.54%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.61%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine3.74%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater2.80%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.80%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous2.80%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.80%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water2.80%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.87%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor1.87%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.93%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.93%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.93%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.93%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.93%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000168Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 10mEnvironmentalOpen in IMG/M
3300000224Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 10mEnvironmentalOpen in IMG/M
3300000225Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 120mEnvironmentalOpen in IMG/M
3300000239Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 36 08/11/09 120mEnvironmentalOpen in IMG/M
3300000930Marine microbial communities from the coastal margin of the Columbia River, USA - 33 PSU, 16mEnvironmentalOpen in IMG/M
3300002154Marine eukaryotic phytoplankton communities from the South Atlantic Ocean - 30m ANT-15 MetagenomeEnvironmentalOpen in IMG/M
3300005523Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265EnvironmentalOpen in IMG/M
3300006404Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006425Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007554Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709EnvironmentalOpen in IMG/M
3300007637Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02EnvironmentalOpen in IMG/M
3300007647Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02EnvironmentalOpen in IMG/M
3300007862Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_0.2umEnvironmentalOpen in IMG/M
3300008961Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02EnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009002Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573EnvironmentalOpen in IMG/M
3300009080Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759EnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017957Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017985Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018048Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019280Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071401AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020051Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020053Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020174Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020191Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020194Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020274Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX556029-ERR598943)EnvironmentalOpen in IMG/M
3300021350Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021364Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300022369Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Washington, United States ? R1119 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022916 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_200_MGEnvironmentalOpen in IMG/M
3300022920 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MGEnvironmentalOpen in IMG/M
3300022921Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaGEnvironmentalOpen in IMG/M
3300022925Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaGEnvironmentalOpen in IMG/M
3300022927Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaGEnvironmentalOpen in IMG/M
3300022934Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaGEnvironmentalOpen in IMG/M
3300022937Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaGEnvironmentalOpen in IMG/M
3300022939Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaGEnvironmentalOpen in IMG/M
3300023084Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaGEnvironmentalOpen in IMG/M
3300023087Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaGEnvironmentalOpen in IMG/M
3300023116Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaGEnvironmentalOpen in IMG/M
3300023119Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaGEnvironmentalOpen in IMG/M
3300024183Seawater microbial communities from Monterey Bay, California, United States - 3DEnvironmentalOpen in IMG/M
3300024223Seawater microbial communities from Monterey Bay, California, United States - 1DEnvironmentalOpen in IMG/M
3300024237Seawater microbial communities from Monterey Bay, California, United States - 65DEnvironmentalOpen in IMG/M
3300024242Seawater microbial communities from Monterey Bay, California, United States - 91DEnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300024294Seawater microbial communities from Monterey Bay, California, United States - 78DEnvironmentalOpen in IMG/M
3300024332Seawater microbial communities from Monterey Bay, California, United States - 73DEnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300025666Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426 (SPAdes)EnvironmentalOpen in IMG/M
3300025701Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025816Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)EnvironmentalOpen in IMG/M
3300025830Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026479Seawater microbial communities from Monterey Bay, California, United States - 26DEnvironmentalOpen in IMG/M
3300026483Seawater microbial communities from Monterey Bay, California, United States - 23DEnvironmentalOpen in IMG/M
3300027250Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300028132Seawater microbial communities from Monterey Bay, California, United States - 61DEnvironmentalOpen in IMG/M
3300028136Seawater microbial communities from Monterey Bay, California, United States - 9DEnvironmentalOpen in IMG/M
3300028297Seawater microbial communities from Monterey Bay, California, United States - 18DEnvironmentalOpen in IMG/M
3300029293Marine harbor viral communities from the Indian Ocean - SCH2EnvironmentalOpen in IMG/M
3300029306Marine harbor viral communities from the Indian Ocean - SCH3EnvironmentalOpen in IMG/M
3300031766Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
LPjun09P1210mDRAFT_101816413300000168MarineGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEVEEEADW*
SI34jun09_10mDRAFT_101148263300000224MarineDDSEPQTEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVEKKKEKEQEIDW*
SI34jun09_120mDRAFT_103857653300000225MarineKSFVGIEDDSQPQTEIVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW*
SI36aug09_120mDRAFT_108627723300000239MarineIDEVKSFVGIEDDSEPQTEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW*
BpDRAFT_1004224613300000930Freshwater And MarineVFIDEVKSFVGIEDDSEPQTEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW*
JGI24538J26636_1003094513300002154MarineAGLGDEVEPQTEVVHENNQSVNVQGPNIVINIPEQQPVKERVIIKEVKIPVKKKKEKEEEVDW*
Ga0066865_1003993153300005523MarineGPNIVINIPEQKTETKTIIKEVPVKEKKEKEEEIDW*
Ga0075515_1062959933300006404AqueousQVEQKQEVNVTGPEIIINIPEQKPVQEKVIIKEVPVKEKKEKEEEIDW*
Ga0075486_178253613300006425AqueousEPQTEVVQENNQSVNVEGPNIVINIPEQKTETKTIIKEVPVEEKKEKEEKIDW*
Ga0099849_107839513300007539AqueousQKQEVNVTGPEIIINIPEQKPVQEKVIIKEVPVKEKKEKEEEIDW*
Ga0102820_109542633300007554EstuarineKSFVGIEDDSQPQTEIVQENNQSVNVEGPTIVVNIPEQQPAKERVIIKEVKVPVKKKKEVEEEADW*
Ga0102906_117499013300007637EstuarineEPQTEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVEKKKEKEQEIDW*
Ga0102855_103135013300007647EstuarineVGIEDDSEPQTEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW*
Ga0105737_107439543300007862Estuary WaterFIDEVKSFVGIEDDSEPQTEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW*
Ga0102887_122070833300008961EstuarineVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW*
Ga0102960_121057513300009000Pond WaterVNVTGPEIIINIPEQKTETKTIIKEVPVKEKKEKEEEIDW*
Ga0102810_117978713300009002EstuarineIDEVKSFIGIEDDSEPQTEIVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEVEEEADW*
Ga0102815_1090793133300009080EstuarineTIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW*
Ga0118687_1038397113300009124SedimentTEVVQENNQSVNVTGPEIIINIPEQKTETKTIIKEVPVEKKKEKEEKIDW*
Ga0115551_127364643300009193Pelagic MarineVQENNQSVNVEGPNIVINIPEQKTETKTIIKEVKVPVEKKKEKEEQVDW*
Ga0115556_102798913300009437Pelagic MarineEGPNIVINIPEQKTETKTIIKEVKVPVEKKKEKEQEIDW*
Ga0115003_1062263733300009512MarineINIPEQQPVKERVIIKEVKVPVKKKKEKEEEVDW*
Ga0098043_103110513300010148MarineTEVVQENNQSVNVEGPNIVINIPEQKTETKTIIKEVPVEEKKEKEEKIDW*
Ga0160423_1105078613300012920Surface SeawaterVQENNQSVNVEGPTIVVNIPEQKKDTVVKKVYVKPVEKPKEKEEKIDW*
Ga0163110_1071318013300012928Surface SeawaterVEVVQENKQEVNVEGPTIVVNIPEQKTETKTIIKEVPVEKKKEKEEEIDW*
Ga0163109_1136580713300012936Surface SeawaterQENNQSVNVEGPTIVVNIPEQKKDTVVKKVYVKPVEKPKEKEEKIDW*
Ga0181377_105672613300017706MarineEDDSEPQTEVVQENNQSVNVEGPTIVVNIPEQQPVKEKVIIKEVKVPVKKKKEVEEEADW
Ga0181398_111586813300017725SeawaterVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEVEEEADW
Ga0181381_109637033300017726SeawaterPEIIINIPEQKTETKTIIKEVQVPVKEKKEKEEEIDW
Ga0181402_103849613300017743SeawaterQSVNVTGPEIIINIPEQKTETKTIIKEVQVPVKEKKEKEEEIDW
Ga0181382_114290213300017756SeawaterSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVEKKKEKEQEIDW
Ga0181409_103743153300017758SeawaterVKSFIGIEDDSEPQTEIVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEVEEEADW
Ga0181385_102327613300017764SeawaterVTGPEIIINIPEQKPAQERVIIKEVPVKEKKEKEEEIDW
Ga0181406_104565143300017767SeawaterEQVQIEQKQEVNVQGPTIVVNIPEQQPVKEKVIIKEVKVPVKKKKEVEEEADW
Ga0181430_113617013300017772SeawaterNVEGPTIVVNIPEQKTETKTIIKEVPVEKKKEKEEEIDW
Ga0181565_1045691733300017818Salt MarshPEIIINIPEQKTETKTIIKEVPVEKKKEKEEEIDW
Ga0181565_1058052213300017818Salt MarshTKTEQVQVEQKQEVNVSGPEIIINIPEQKTETKTIIKEVPAKKKKEKEEEIDW
Ga0181565_1061135713300017818Salt MarshKQEVNVSGPEIIINIPEQKTETKTIIKEVPVKEKKEKEEEIDW
Ga0181552_1004665763300017824Salt MarshEQKQEVNVTGPEIIINIPEQKTETKTIIKEVPVEKKKEKEEEIDW
Ga0181577_1043146813300017951Salt MarshKQEVNVEGPTIVVNIPDQQPVKERVIVKEVPVEEKKEKEEKIDW
Ga0181583_1000534613300017952Salt MarshNDSIQEPQIIINIPEQKPVEKTVIVKEVPVKVEKEKEDVDW
Ga0181571_1042910743300017957Salt MarshVNVTGPEIIINIPEQKPAETRTIIKEVPAKKKKEKEEEIDW
Ga0181571_1043038213300017957Salt MarshQVEQKQEVNVSGPEIIINIPEQKTETKTIIKEVPAKKKKEKEEEIDW
Ga0181581_1061995033300017962Salt MarshVNVTGPEIIINIPEQKTETKTIIKEVPVEKKKEKEEEIDW
Ga0181576_1023054753300017985Salt MarshVTGPEIIINIPEQKTETKTIIKEVPVEKKKEKEEEIDW
Ga0181576_1036386813300017985Salt MarshDEDTAGVEVVQENKQEVNVEGPTIVVNIPDQQPVKERVIVKEVPVEEKKEKEEKIDW
Ga0181576_1095384623300017985Salt MarshVNVSGPEIIINIPEQKTETKTIIKEVPVKEKKEKEEEIDW
Ga0181601_1032410913300018041Salt MarshPEIIINIPEQKTETKTIIKEVPAKPVEKPKEKEELLDW
Ga0181606_1042268713300018048Salt MarshKTEQVEVKAEQNQSVNVTGPEIIINIPEQKPTETKTIIKEVPVKRKKEKEEEIDW
Ga0182068_175066133300019280Salt MarshEQVQVEQKQEVNVTGPEIIINIPEQKTETKTIIKEVPVEKKKEKEEEIDW
Ga0181555_117941543300020051Salt MarshESEPQTEIVQENNQSVNVTGPEIIINIPEQKTETKTIIKEVPVEKKKEKEEEIDW
Ga0181595_1019450833300020053Salt MarshTGPEIIINIPEQKPTETKTIIKEVPVKRKKEKEEEIDW
Ga0181603_1003661713300020174Salt MarshPEIIINIPEQKTETKTIIKEVPAKPVEKPKEKEQEIDW
Ga0181604_1024010913300020191Salt MarshVTGPEIIINIPEQKTETKTIIKEVPAKPVEKPKEKEQEIDW
Ga0181597_1024842513300020194Salt MarshNVTGPEIIINIPEQKPAETRTIIKEVPAKKKKEKEEEIDW
Ga0211658_110952333300020274MarineQTEVVQENNQSVNVEGPTIVVNIPEQQPVKEKVIVKEVPVEKKKEKEEEIDW
Ga0206692_127292713300021350SeawaterENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVEKKKEKEQEIDW
Ga0213859_1001257273300021364SeawaterETGPEIIINIPEQKTETKTIIKEVPVEKKKEKEEEIDW
Ga0213859_1012237843300021364SeawaterVNVTGPEIIINIPEQKTETKTIIKEVPAKKKKEKEEEIDW
Ga0213861_1006340413300021378SeawaterEPQTEVVQENNQSVNVEGPNIVINIPEQKTETKTIIKEVPVEKKKEKEEEIDW
Ga0213868_1022925513300021389SeawaterNVEGPNIVINIPEQKTETKTIIKEVKVPVKKKKEKEQEIDW
Ga0222717_1011154613300021957Estuarine WaterKSFVGIEDDSEPQTEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW
Ga0222717_1060083213300021957Estuarine WaterEVKAEQNQSVNVTGPEIIINIPEQKPAETKTIIKEVPAKKKKEKEEEIDW
Ga0222716_1067347413300021959Estuarine WaterTEQVRVEQKQEVNVSGPEIIINIPEQKTETKTIIKEVPVKEKKEKEQEIDW
Ga0210310_102640213300022369EstuarineDDSEPQTEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVEKKKEKEQEIDW
(restricted) Ga0233431_134497813300022916SeawaterEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW
(restricted) Ga0233426_1040233513300022920SeawaterIEDDSEPQTEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW
Ga0255765_106264643300022921Salt MarshQVEVKAEQNQSVNVTGPEIIINIPEQKPTETKTIIKEVPVKKKKEKEEEIDW
Ga0255773_1004392813300022925Salt MarshTEQVQVEQKQEVNVTGPEIIINIPEQKPVQEKVIIKEVPVKEKKEKEEEIDW
Ga0255769_1031225533300022927Salt MarshVTGPEIIINIPEQKPVQEKVIIKEVPVKEKKEKEEEIDW
Ga0255781_1044143733300022934Salt MarshTIVVNIPDQQPVKERVIVKEVPVEEKKEKEEKIDW
Ga0255770_1021195853300022937Salt MarshGPEIIINIPEQKPAETKTIIKEVPAKKKKEKEEEIDW
Ga0255754_1016298743300022939Salt MarshNVTGPEIIINIPEQKTETKTIIKEVPVEKKKEKEEEIDW
Ga0255754_1038838613300022939Salt MarshTEQVQVEQKQEVNVTGPEIIINIPEQKTETKTIIKEVPVEKKKEKEEEIDW
Ga0255754_1050613623300022939Salt MarshNKTEQVQVEQKQEVNVSGPEIIINIPEQKTETKTIIKEVPAKKKKEKEEEIDW
Ga0255778_1040964333300023084Salt MarshEVVQEQKQEVNVTGPEIIINIPEQKPAETRTIIKEVPAKKKKEKEEEIDW
Ga0255774_1009610763300023087Salt MarshQKQEVNVSGPEIIINIPEQKTETKTIIKEVPVKEKKEKEEEIDW
Ga0255751_1007022263300023116Salt MarshEKNQSVNVTGPEIIINIPEQKTETKTIIKEVPVEKKKEKEEEIDW
Ga0255762_1042026113300023119Salt MarshIQEPQIIINIPEQKPVEKTVIVKEVPVKVEKEKEDVDW
Ga0228603_100360113300024183SeawaterKQEVNVTGPEIIINIPEQKPAQERVIIKEVPVKEKKEKEEEIDW
Ga0228601_105403333300024223SeawaterPQTEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW
Ga0228653_101502713300024237SeawaterEVNVQGPTIVVNIPEQQPVKEKVIIKEVKVPVKKKKEVEEEADW
Ga0228673_103705413300024242SeawaterNVEGPSIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW
(restricted) Ga0233438_1006361763300024255SeawaterTIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW
Ga0228664_103119813300024294SeawaterSEPQTEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVEKKKEKEQEIDW
Ga0228659_105874113300024332SeawaterENAQVEVVQENKQEVNVEGPTIVVNIPEQKTETKTIIKEVKVPVEKKKEKEQEIDW
Ga0244777_1023378853300024343EstuarineIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW
Ga0244776_1094605223300024348EstuarineTEIVQENNQSVNVEGPTIVVNITEQQVKEKVIIKEVKVPVKKKKEVEEEADW
Ga0209601_114246933300025666Pelagic MarineENNQSVNVEGPNIVINIPEQKTETKTIIKEVKVPVEKKKEKEQEIDW
Ga0209771_119651313300025701MarineQTEQVQVEQKQEVNVTGPEIIINIPEQKPVETKTIIKEVPAKKKKEKEEEIDW
Ga0209193_103156243300025816Pelagic MarineVGIEDDSEPQTEVVQENNQSVNVEGPNIVINIPEQKTETKTIIKEVPVKKKKEVEEEADW
Ga0209832_106402253300025830Pelagic MarineQTEVVQENNQSVNVEGPNIVINIPEQKTETKTIIKEVKVPVEKKKEKEQEIDW
Ga0209603_131394413300025849Pelagic MarineESEPQTEIVQENNQSVNVEGPNIVINIPEQKTETKTIIKEVKVPVKKKKEVEEEADW
Ga0209603_134093233300025849Pelagic MarineENNQSVNVEGPNIVINIPEQKTETKTIIKEVKVPVEKKKEKEEQVDW
Ga0209932_101000813300026183Pond WaterIQVEQKQEVNVTGPEIIINIPEQKTETKTIIKEVPVKKKKEKEEEIDW
Ga0209932_109491833300026183Pond WaterSGPEIIINIPEQKTETKTIIKEVPVKEKKEKEQEIDW
Ga0228622_101909813300026479SeawaterPQTEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVEKKKEKEQEIDW
Ga0228620_102099713300026483SeawaterQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW
Ga0208310_103747533300027250EstuarineSVNVQGPTIVVNIPEQQPAKERVIIKEVKVPVKKKKEVEEEADW
Ga0209711_1033611813300027788MarineAGIGDVVEPQTEVVHENNQSVNVQGPNIIINIPEQQPVKERVVIKEVKVPIKKKKEKEEEVDW
Ga0228649_115904823300028132SeawaterQEVNVQGPTIVVNIPEQQPVKEKVIIKEVKVPVKKKKEVEEEADW
Ga0228608_116104833300028136SeawaterSFVGIEDDSEPQTEVVQENNQSVNVEGPTIVVNIPEQQVKEKVIIKEVKVPVKKKKEKEQEIDW
Ga0228617_115583133300028297SeawaterTIVVNIPEQKTETKTIIKEVKVPVEKKKEKEQEIDW
Ga0135211_103192613300029293Marine HarborAVVDTTKVETPQIVINIPEQKTETKTIIKEVPVEKKKEKEQEIIW
Ga0135212_102537913300029306Marine HarborMESIFSPAEPEVVQEIKQDSIQQPNIVINLPETKTEVKTIIKEVPVEKKKEKEEEIDW
Ga0315322_1090326413300031766SeawaterPTIVVNIPEQQPVKEKVIIKEVKVPVKKKKEVEEEADW
Ga0315331_1069914413300031774SeawaterEGPTIVVNIPEQQVKEKVIIKEVKVPVEKKKEKEQEIDW


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