NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F092077

Metagenome / Metatranscriptome Family F092077

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092077
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 50 residues
Representative Sequence MTKELSPLQRSFDRINELIPNNSDVLLRCSLYEMCVELTNKSFAEGINTKY
Number of Associated Samples 82
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 18.69 %
% of genes from short scaffolds (< 2000 bps) 76.64 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (70.093 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(13.084 % of family members)
Environment Ontology (ENVO) Unclassified
(74.766 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(72.897 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 62.75%    β-sheet: 0.00%    Coil/Unstructured: 37.25%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF08279HTH_11 1.87
PF02796HTH_7 1.87
PF12684DUF3799 1.87
PF13619KTSC 1.87
PF13306LRR_5 0.93
PF04404ERF 0.93
PF11351GTA_holin_3TM 0.93



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A70.09 %
All OrganismsrootAll Organisms29.91 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10093290All Organisms → Viruses → Predicted Viral1279Open in IMG/M
3300000928|OpTDRAFT_10331680Not Available507Open in IMG/M
3300001344|JGI20152J14361_10036796All Organisms → Viruses → Predicted Viral1490Open in IMG/M
3300001344|JGI20152J14361_10119552Not Available500Open in IMG/M
3300001348|JGI20154J14316_10113331Not Available823Open in IMG/M
3300001351|JGI20153J14318_10063297All Organisms → Viruses → Predicted Viral1231Open in IMG/M
3300001450|JGI24006J15134_10079456Not Available1232Open in IMG/M
3300001589|JGI24005J15628_10140383Not Available749Open in IMG/M
3300001938|GOS2221_1022709All Organisms → Viruses → Predicted Viral1744Open in IMG/M
3300004448|Ga0065861_1105697Not Available555Open in IMG/M
3300004457|Ga0066224_1133914Not Available705Open in IMG/M
3300004460|Ga0066222_1147545Not Available707Open in IMG/M
3300005588|Ga0070728_10610331Not Available564Open in IMG/M
3300005589|Ga0070729_10183640Not Available1219Open in IMG/M
3300005821|Ga0078746_1107539Not Available647Open in IMG/M
3300006467|Ga0099972_11469863Not Available783Open in IMG/M
3300006735|Ga0098038_1002460Not Available7894Open in IMG/M
3300006750|Ga0098058_1174953Not Available562Open in IMG/M
3300006920|Ga0070748_1077441All Organisms → Viruses → Predicted Viral1288Open in IMG/M
3300006920|Ga0070748_1097026All Organisms → Viruses → Predicted Viral1126Open in IMG/M
3300006925|Ga0098050_1144256Not Available600Open in IMG/M
3300006929|Ga0098036_1072115Not Available1065Open in IMG/M
3300007276|Ga0070747_1088922Not Available1147Open in IMG/M
3300009074|Ga0115549_1048681Not Available1519Open in IMG/M
3300009074|Ga0115549_1126724Not Available840Open in IMG/M
3300009074|Ga0115549_1135944Not Available805Open in IMG/M
3300009074|Ga0115549_1188413Not Available661Open in IMG/M
3300009076|Ga0115550_1108395Not Available1017Open in IMG/M
3300009136|Ga0118735_10208129Not Available644Open in IMG/M
3300009149|Ga0114918_10044752Not Available3024Open in IMG/M
3300009172|Ga0114995_10442052Not Available712Open in IMG/M
3300009422|Ga0114998_10140320Not Available1168Open in IMG/M
3300009434|Ga0115562_1111852Not Available1064Open in IMG/M
3300009507|Ga0115572_10013997All Organisms → cellular organisms → Bacteria5763Open in IMG/M
3300009599|Ga0115103_1119095Not Available2146Open in IMG/M
3300009599|Ga0115103_1302056All Organisms → Viruses → Predicted Viral2166Open in IMG/M
3300009599|Ga0115103_1502111Not Available595Open in IMG/M
3300009599|Ga0115103_1624423Not Available892Open in IMG/M
3300009599|Ga0115103_1856964All Organisms → Viruses → Predicted Viral1413Open in IMG/M
3300010430|Ga0118733_105748448Not Available651Open in IMG/M
3300011118|Ga0114922_10813613Not Available763Open in IMG/M
3300011125|Ga0151663_1000341All Organisms → Viruses → Predicted Viral2425Open in IMG/M
3300013098|Ga0164320_10243665Not Available847Open in IMG/M
3300013101|Ga0164313_10129159Not Available2135Open in IMG/M
3300017724|Ga0181388_1045866All Organisms → Viruses → Predicted Viral1059Open in IMG/M
3300017746|Ga0181389_1015903All Organisms → Viruses → Predicted Viral2410Open in IMG/M
3300017762|Ga0181422_1126312Not Available791Open in IMG/M
3300017773|Ga0181386_1170206Not Available662Open in IMG/M
3300017783|Ga0181379_1093794Not Available1104Open in IMG/M
3300020165|Ga0206125_10076775All Organisms → Viruses → Predicted Viral1489Open in IMG/M
3300020166|Ga0206128_1000267Not Available62207Open in IMG/M
3300020166|Ga0206128_1001488Not Available23101Open in IMG/M
3300020166|Ga0206128_1016726Not Available4330Open in IMG/M
3300020166|Ga0206128_1059294All Organisms → Viruses → Predicted Viral1813Open in IMG/M
3300020166|Ga0206128_1064444All Organisms → Viruses → Predicted Viral1713Open in IMG/M
3300020166|Ga0206128_1073656Not Available1560Open in IMG/M
3300020166|Ga0206128_1193434Not Available785Open in IMG/M
3300020169|Ga0206127_1005996All Organisms → cellular organisms → Bacteria10053Open in IMG/M
3300020169|Ga0206127_1074901All Organisms → Viruses → Predicted Viral1548Open in IMG/M
3300020169|Ga0206127_1156038Not Available876Open in IMG/M
3300020187|Ga0206130_10087702All Organisms → Viruses → Predicted Viral1902Open in IMG/M
3300021085|Ga0206677_10034074All Organisms → Viruses → Predicted Viral2819Open in IMG/M
3300021085|Ga0206677_10227405Not Available783Open in IMG/M
3300021185|Ga0206682_10080263All Organisms → Viruses → Predicted Viral1670Open in IMG/M
3300021185|Ga0206682_10235416Not Available819Open in IMG/M
3300021185|Ga0206682_10242582Not Available803Open in IMG/M
3300021185|Ga0206682_10262951Not Available762Open in IMG/M
3300021350|Ga0206692_1184371Not Available711Open in IMG/M
3300021371|Ga0213863_10127017All Organisms → Viruses → Predicted Viral1187Open in IMG/M
3300021375|Ga0213869_10013000All Organisms → cellular organisms → Bacteria4899Open in IMG/M
3300021378|Ga0213861_10080914All Organisms → Viruses → Predicted Viral1986Open in IMG/M
3300022053|Ga0212030_1000689All Organisms → Viruses → Predicted Viral2683Open in IMG/M
3300022308|Ga0224504_10208075Not Available807Open in IMG/M
(restricted) 3300022913|Ga0233404_10150182Not Available566Open in IMG/M
(restricted) 3300022938|Ga0233409_10260277Not Available598Open in IMG/M
(restricted) 3300023109|Ga0233432_10133694Not Available1331Open in IMG/M
(restricted) 3300023210|Ga0233412_10400173Not Available614Open in IMG/M
(restricted) 3300023276|Ga0233410_10167201Not Available700Open in IMG/M
(restricted) 3300024059|Ga0255040_10009267All Organisms → Viruses → Predicted Viral3217Open in IMG/M
3300024262|Ga0210003_1070319Not Available1691Open in IMG/M
(restricted) 3300024340|Ga0255042_10134913Not Available724Open in IMG/M
(restricted) 3300024517|Ga0255049_10324679Not Available708Open in IMG/M
(restricted) 3300024519|Ga0255046_10500666Not Available582Open in IMG/M
(restricted) 3300024520|Ga0255047_10215807Not Available975Open in IMG/M
(restricted) 3300024529|Ga0255044_10423013Not Available558Open in IMG/M
(restricted) 3300024529|Ga0255044_10425303Not Available557Open in IMG/M
3300025086|Ga0208157_1025548All Organisms → Viruses → Predicted Viral1750Open in IMG/M
3300025102|Ga0208666_1013991All Organisms → Viruses → Predicted Viral2677Open in IMG/M
3300025138|Ga0209634_1014007Not Available4685Open in IMG/M
3300025543|Ga0208303_1051376Not Available1000Open in IMG/M
3300025594|Ga0209094_1042664All Organisms → cellular organisms → Bacteria1225Open in IMG/M
3300025620|Ga0209405_1087327Not Available929Open in IMG/M
3300025621|Ga0209504_1055101All Organisms → cellular organisms → Bacteria1194Open in IMG/M
3300025621|Ga0209504_1103255Not Available743Open in IMG/M
3300025632|Ga0209194_1062604Not Available1026Open in IMG/M
3300025849|Ga0209603_1016932All Organisms → Viruses → Predicted Viral4787Open in IMG/M
3300027687|Ga0209710_1002985Not Available11568Open in IMG/M
3300027687|Ga0209710_1005481Not Available7975Open in IMG/M
3300027820|Ga0209578_10495166Not Available549Open in IMG/M
3300027833|Ga0209092_10012843All Organisms → cellular organisms → Bacteria5997Open in IMG/M
(restricted) 3300027861|Ga0233415_10200038Not Available921Open in IMG/M
3300027978|Ga0209165_10051999Not Available1456Open in IMG/M
3300028599|Ga0265309_10019060Not Available3517Open in IMG/M
3300028599|Ga0265309_10249758Not Available1125Open in IMG/M
3300031519|Ga0307488_10000107Not Available57963Open in IMG/M
3300031565|Ga0307379_11572445Not Available520Open in IMG/M
3300031578|Ga0307376_10055424All Organisms → Viruses → Predicted Viral2872Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine13.08%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine12.15%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater11.21%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater9.35%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater7.48%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment5.61%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater5.61%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous4.67%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.67%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine3.74%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface2.80%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.80%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.80%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment1.87%
SedimentEnvironmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment1.87%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.87%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.93%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.93%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.93%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.93%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.93%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.93%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.93%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.93%
Marine SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000928Marine plume microbial communities from the Columbia River - 25 PSUEnvironmentalOpen in IMG/M
3300001344Pelagic Microbial community sample from North Sea - COGITO 998_met_02EnvironmentalOpen in IMG/M
3300001348Pelagic Microbial community sample from North Sea - COGITO 998_met_04EnvironmentalOpen in IMG/M
3300001351Pelagic Microbial community sample from North Sea - COGITO 998_met_03EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300001938Marine microbial communities from Bedford Basin, Nova Scotia, Canada - GS005EnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004457Marine viral communities from Newfoundland, Canada MC-1EnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300005588Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.1EnvironmentalOpen in IMG/M
3300005589Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2EnvironmentalOpen in IMG/M
3300005821Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, PM1EnvironmentalOpen in IMG/M
3300006467Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935EnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009076Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511EnvironmentalOpen in IMG/M
3300009136Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 82 cmbsfEnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009434Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009599Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300011118Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaGEnvironmentalOpen in IMG/M
3300011125Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_4, permeateEnvironmentalOpen in IMG/M
3300013098Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cmEnvironmentalOpen in IMG/M
3300013101Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cmEnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020169Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021350Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022308Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_24EnvironmentalOpen in IMG/M
3300022913 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_2_MGEnvironmentalOpen in IMG/M
3300022938 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_13_MGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300023276 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_1_MGEnvironmentalOpen in IMG/M
3300024059 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2EnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024340 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_5EnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300024519 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300024529 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_21EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025594Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)EnvironmentalOpen in IMG/M
3300025620Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)EnvironmentalOpen in IMG/M
3300025621Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)EnvironmentalOpen in IMG/M
3300025632Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300027687Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027820Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027833Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300027978Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1 (SPAdes)EnvironmentalOpen in IMG/M
3300028599Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1009329023300000101MarineMTEELSPLKLSFKRINELIPDSHDVLLRCSLYEMCVELTNKSFSEGINTKY*
OpTDRAFT_1033168023300000928Freshwater And MarineMTKELSPLQRSFDRINELIPNNSDVMLRCSLYEMCAKLTNESFSEGINTKY*
JGI20152J14361_1003679653300001344Pelagic MarineMTEELSPLKLSFKRINELIPDSHDVLLRCSLYEMCVELTNKSFSEGINPKY*
JGI20152J14361_1011955223300001344Pelagic MarineMNKELSPLQRSFNRINELMPDNKDVLLRCSLYEMCYELTNESFAEGINTKY*
JGI20154J14316_1011333143300001348Pelagic MarineKYITMTEELSPLQRSFERINELIPNNSDVMLRCSLYEMCVELTTKSFAEGINTKY*
JGI20153J14318_1006329743300001351Pelagic MarineMTKELSPLQRSFDRINELIPNNSDVMLRCSLYEMCVELTNESFSEGINTKY*
JGI24006J15134_1007945613300001450MarineMTEELSPLQRSFERINELIPHSHDVLLRCSLYEMCVELTNKSFAEGINTKY*
JGI24005J15628_1014038313300001589MarineNKDLSPLQRSFERINELIPHSHDVLLRCSLYEMCVELTNKSFAEGINTKY*
GOS2221_102270943300001938MarineMTKELSPLQRSFDRINELIPDNSDVMLRCSLYEMCAELTNESFAEGINAKY*
Ga0065861_110569723300004448MarineMNKDLSPLQRSFDRINELIPHSHDVLLRCSLYEMCVELTNKSFAEGINTKY*
Ga0066224_113391433300004457MarineMDKELSPLQRSFKRINELLPDSDQVLLRCDLYTMCTELTNK
Ga0066222_114754513300004460MarineMTEELSPLKRSFERINELIPNNHDVLLRCSLYEMCVELTNKSFAEGINTKY*
Ga0070728_1061033123300005588Marine SedimentMNKELSPLQRSFKRINELLPDSDQVLLRCDLYTMCTELTNESFAEGINTKY*
Ga0070729_1018364033300005589Marine SedimentMTEELSPLKLSFKRINELIPHSHDVLLRCSLYEMCVELTNKSFAEGINTKY*
Ga0078746_110753913300005821Marine SedimentMNKELSPLQRSFKRINELLPDSDQVLLRCNLYTMCTELTNESFAEGINTKY*
Ga0099972_1146986333300006467MarineMTEELSPLKRSFERINELIPHSHDVLLRCSLYEMCVELTNKSFAEGINTKY*
Ga0098038_100246083300006735MarineMNKELSPLQRSFERINELIPNSDDVLLRCSLYEMCVELTNKSFVEGINTKY*
Ga0098058_117495323300006750MarineMNKELSPLQRSFERINELIPDVNDVLLRCSLYEMCAELTNESFREGINAKY*
Ga0070748_107744123300006920AqueousMKELSPLQRSFERINELIPDNSDVLLRCDLYEMCVELTNKSFAEGINTKY*
Ga0070748_109702633300006920AqueousMNKDLSPLQRSFERINELIPDNKDVLLRCSLYEMCTKLTNESFAEGINTKY*
Ga0098050_114425613300006925MarineMNKELSPLQRSFERINELIPDTSDVLLRCDLYEMCVELTNKSFAEGINAKY*
Ga0098036_107211533300006929MarineMTKKLSPLQLSFQRINELLPNNNQALLRCDLYEMCVKLTNSSFAEGINTKY*
Ga0070747_108892223300007276AqueousMNKELSPLQRSFERINELIPDNKDVLLRCSLYEMCTKLTNESFAEGINTKY*
Ga0115549_104868133300009074Pelagic MarineMNKDLSPLQRSFKRINELLPDSDQVLLRCDLYTMCTELTNKSFAEGINTKY*
Ga0115549_112672413300009074Pelagic MarineMTKELSPLQRSFDRINELIPNNSDVLLRCSLYEMCVELTNESFSEGINTKY*
Ga0115549_113594443300009074Pelagic MarineMTKELSPLQRSFKRINELLPDSDQVLLRCDLYTMCTELTNKS
Ga0115549_118841313300009074Pelagic MarineMNKDLSPLQRSFDRINELIPNNSDVMLRCSLYEMCVELTNESFSEGINTKY*
Ga0115550_110839523300009076Pelagic MarineMTEELSPLQRSFERINELIPNNSDVMLRCSLYEMCVELTTKSFAEGINTKY*
Ga0118735_1020812923300009136Marine SedimentMNKDLSPLQRSFERINELIPHSHDVLLRCSLYEMCVELTNKSFAEGINTKY*
Ga0114918_1004475283300009149Deep SubsurfaceMNKELSPLQRSFDRINELIPHSHDALLRCSLYEMCVELTNKSFAEGINTKY*
Ga0114995_1044205233300009172MarineMTEELSPLKRSFERINELIPHSHDVLLRCSLYEMCVELTNKSFSEGINTKY*
Ga0114998_1014032043300009422MarineMDKELSPLQRSFDRINELIPHSHDVLLRCSLYEMCVELTNKSFAEGINTKY*
Ga0115562_111185233300009434Pelagic MarineMNKDLSPLQRSFKRINELIPDNKDVLLRCSLYEMCTELTNESFAEGINTKY*
Ga0115572_10013997133300009507Pelagic MarineMKELSPLQRSFERINELMPDNKDVLLRCSLYEMCFELTNQSFAEGINTKY*
Ga0115103_111909543300009599MarineMTEELSPLQRSFDRINELIPDNSDVMLRCSLYEMCAKLTNESFSEGINTKY*
Ga0115103_130205653300009599MarineMNKDLSPLQRSFERINELIPNNSDVMLRCSLYEMCAKLTNESFSEGINAKY*
Ga0115103_150211123300009599MarineMTKELSPLQRSFERINELIPNSHDVMLRCSLYEMCVELTNKSFAEGINTKY*
Ga0115103_162442323300009599MarineMTKELSPLQRSFERINELLPDNNDVLLRCSLYEMCAKLTNESFSEGINTKY*
Ga0115103_185696423300009599MarineMTKELSPLQRSFDRINELIPNNSDVLLRCSLYEMCVELTNKSFAEGINTKY*
Ga0118733_10574844833300010430Marine SedimentINELLPDSDQVLLRCDLYTMCTELTNESFAEGINTKY*
Ga0114922_1081361333300011118Deep SubsurfaceMNKELSPLQRSFKRINELLPDSDQVLLRCNLYTMCTELTNESFVEGINTKY*
Ga0151663_100034153300011125MarineMTEELSPLQRSFDRINELIPDNSDVMLRCSLYEMCVELTTESFSEGINTKY*
Ga0164320_1024366533300013098Marine SedimentMTKELSPLQRSFKRINELIPDNNDVLLRCSLYEMCVELTNKSFAEGINTKY*
Ga0164313_1012915933300013101Marine SedimentMSKIQSPLQRSFERINELIPNSDDVLLRCSLYEMCVELTNKSFVEGINTKY*
Ga0181388_104586623300017724SeawaterMTKELSPLQRSFDRINELIPNNSDVMLRCSLYEMCVELTNKSFAEGINTKY
Ga0181389_101590323300017746SeawaterMTKELSPLQRSFERINELIPHSHDVLLRCSLYEMCVELTNKSFAEGINTKY
Ga0181422_112631233300017762SeawaterMTKELSPLQRSFDRINELIPDNSDVILRCSLYEMCAKLTNESFSEGINAKY
Ga0181386_117020623300017773SeawaterMTKELSPLQRSFERINELIPNNNDALLRCSLYEMCVELTNKSFAEGINTKY
Ga0181379_109379413300017783SeawaterTMTKELSPLQRSFERINELIPNSHDVLLRCSLYEMCVELTNKAFAEGINTKY
Ga0206125_1007677513300020165SeawaterMKELSPLQRSFERINELIPDNSDVLLRCDLYEMCVELTNKSFAEGINTKY
Ga0206128_1000267693300020166SeawaterMNKDLSPLQRSFKRINELLPDSDQVLLRCDLYTMCTELTNKSFAEGINTKY
Ga0206128_1001488193300020166SeawaterMTEELSPLKLSFKRINELIPDSHDVLLRCSLYEMCVELTNKSFSEGINTKY
Ga0206128_101672693300020166SeawaterMTKELSPLQRSFKRINELLPDSDQVLLRCDLYTMCTELTNKSFAEGINTKY
Ga0206128_105929423300020166SeawaterMTEELSPLQRSFDRINELIPHNRDVLLRCSLYEMCVELTNKSFAEGINTKY
Ga0206128_106444423300020166SeawaterMTKELSPLQRSFDRINELIPNNSDVMLRCSLYEMCVELTNESFSEGINTKY
Ga0206128_107365643300020166SeawaterMTKELSPLQRSFDRINELIPNNNDVMLRCSLYEMCAKLTNESFSEGINTKY
Ga0206128_119343433300020166SeawaterMNKDLSPLQRSFDRINELIPHSHDVLLRCSLYEMCVELTNKSFSEGINTKY
Ga0206127_100599613300020169SeawaterMNKDLSPLQRSFKRINELLPDSDQVLLRCDLYTMCTELTNKSFAEGIN
Ga0206127_107490123300020169SeawaterMTKELSPLQRSFDRINELIPNNSDVLLRCSLYEMCVELTNESFSEGINTKY
Ga0206127_115603813300020169SeawaterMNKELSPLQRSFKRINELLPDSDQVLLRCNLYTMCTELTNESFAEGINTKY
Ga0206130_1008770213300020187SeawaterMTKELSPLQRSFDRINELIPNNSDVLLRCSLYEMCVELTNKSFSEGINTKY
Ga0206677_1003407433300021085SeawaterMTKELSPLQRSFDRINELIPNNSDVLLRCSLYEMCVELTNKSFAEGINTKY
Ga0206677_1022740533300021085SeawaterMTKELSPLQRSFERINELIPNSHDVMLRCSLYEMCVELTNKSFAEGINTKY
Ga0206682_1008026323300021185SeawaterMNKDLSPLQRSFERINELLPDNNDVMLRCSLYEMCAKLTNESFAEGINTKY
Ga0206682_1023541613300021185SeawaterMNKDLSPLQRSFERINELIPDNNDVLLRCSLYEMCVELTNKSFAEGINTKY
Ga0206682_1024258243300021185SeawaterFDRINELIPNNSDVLLRCSLYEMCVELTNESFSEGINTKY
Ga0206682_1026295113300021185SeawaterMTKELSPLQRSFERINELIPNNSDVLLRCSLYEMCAKLTNESFSEGINTKY
Ga0206692_118437113300021350SeawaterQYITMTKELSPLQRSFDRINELIPDNSDVMLRCSLYEMCAELTNESFAEGINTKY
Ga0213863_1012701713300021371SeawaterMNKELSPLQRSFERINELIPDNSDVLLRCDLYEMCVELTNKSFAEGINTKY
Ga0213869_10013000153300021375SeawaterMNKELSPLQRSFDRINELIPHSHDVLLRCSLYEMCVELTNKSFAEGINTKY
Ga0213861_1008091453300021378SeawaterMNKDLSPLQRSFDRINELIPHSHDVLLRCSLYEMCVELTNKSFAEGINTKY
Ga0212030_100068983300022053AqueousMTEELSPLKRSFERINELIPNNHDVLLRCSLYEMCVELTNKSFAEGINTKY
Ga0224504_1020807533300022308SedimentMTKELSPLQRSFERINELIPSTSDVLLRCSLYEMCTELTNESFKEGINTKYY
(restricted) Ga0233404_1015018223300022913SeawaterMTEELSPLQRSFERINELIPNNSDVMLRCSLYEMCVELTTKSFAEGINTKY
(restricted) Ga0233409_1026027723300022938SeawaterMNKDLSPLQRSFERINELIPNNSDVMLRCSLYEMCAKLTNESFSEGINAKY
(restricted) Ga0233432_1013369453300023109SeawaterMTKELSPLQRSFDRINELIPNNSDVMLRCSLYEMCAKLTNESFSEGINAKY
(restricted) Ga0233412_1040017313300023210SeawaterMTKELSPLQRSFERINELIPNNSDVLLRCSLYEMCVELTNKSFSEGINTKY
(restricted) Ga0233410_1016720113300023276SeawaterMTKELSPLQRSFDRINELIPNNSDVMLRCSLYEMCAKLTNESFSEGINTKY
(restricted) Ga0255040_1000926733300024059SeawaterMNKDLSPLQRSFERINELLPDNNDVLLRCSLYEMCAKLTNESFSEGINTKY
Ga0210003_107031963300024262Deep SubsurfaceKYITMTEELSPLKRSFERINELIPHSHDVLLRCSLYEMCVELTNKSFSEGINTKY
(restricted) Ga0255042_1013491333300024340SeawaterMNKDLSPLQRSFERINELIPDNNDVLLRCSLYEMCAKLTNESFAEGINTKY
(restricted) Ga0255049_1032467923300024517SeawaterMTEELSPLQRSFERINELIPNNSDVMLRCSLYEMCVELTNESFKEGINAKY
(restricted) Ga0255046_1050066623300024519SeawaterMTKELSPLQRSFERINELIPNNGDVLLRCSLYEMCAKLTNESFSEGINTKY
(restricted) Ga0255047_1021580713300024520SeawaterMTEELSPLQRSFERINELIPDNNDVLLRCSLYEMCAKLTNESFSEGINTKY
(restricted) Ga0255044_1042301323300024529SeawaterKYITMTEELSPLQRSFERINELIPNNSDVMLRCSLYEMCVELTTKSFAEGINTKY
(restricted) Ga0255044_1042530313300024529SeawaterMNKDLSPLQRSFERINELLPDNNDVLLRCSLYEMCAKLTNESFAEGINTKY
Ga0208157_102554843300025086MarineMNKELSPLQRSFERINELIPNSDDVLLRCSLYEMCVELTNKSFVEGINTKY
Ga0208666_101399113300025102MarineERINELIPNSDDVLLRCSLYEMCVELTNKSFVEGINTKY
Ga0209634_1014007143300025138MarineMTEELSPLQRSFERINELIPHSHDVLLRCSLYEMCVELTNKSFAEGINTKY
Ga0208303_105137623300025543AqueousMNKELSPLQRSFKRINELLPDSDQVLLRCDLYTMCTELTNESFAEGINTKY
Ga0209094_104266453300025594Pelagic MarineNELLPDSDQVLLRCDLYTMCTELTNESFAEGINTKY
Ga0209405_108732713300025620Pelagic MarineMNKDLSPLQRSFKRINELIPDNKDVLLRCSLYEMCTELTNESFAEGINTKY
Ga0209504_105510113300025621Pelagic MarineLKYITMNKELSPLQRSFKRINELLPDSDQVLLRCNLYTMCTELTNESFAEGINTKY
Ga0209504_110325533300025621Pelagic MarineLQRSFDRINELIPNNSDVMLRCSLYEMCVELTNESFSEGINTKY
Ga0209194_106260413300025632Pelagic MarineMNKELSPLQRSFNRINELMPDNKDVLLRCSLYEMCYELTNESFAEGINTKY
Ga0209603_101693233300025849Pelagic MarineMKELSPLQRSFERINELMPDNKDVLLRCSLYEMCFELTNQSFAEGINTKY
Ga0209710_100298563300027687MarineMTEELSPLKRSFERINELIPHSHDVLLRCSLYEMCVELTNKSFSEGINTKY
Ga0209710_1005481143300027687MarineMDKELSPLQRSFDRINELIPHSHDVLLRCSLYEMCVELTNKSFAEGINTKY
Ga0209578_1049516613300027820Marine SedimentEELSPLKRSFERINELIPNNHDVLLRCSLYEMCVELTNKSFAEGINTKY
Ga0209092_1001284363300027833MarineMNKDLSPLQRSFERINELIPHSHDVLLRCSLYEMCVELTNKSFAEGINTKY
(restricted) Ga0233415_1020003833300027861SeawaterMNKDLSPLQRSFERINELLPNNNDVMLRCSLYEMCAKLTNESFSEGINAKY
Ga0209165_1005199933300027978Marine SedimentMTEELSPLQRSFNRINELIPHSHDVLLRCSLYEMCVELTNKSFSEGINTKY
Ga0265309_10019060103300028599SedimentPLQRSFKRINELLPDSDQVLLRCDLYTMCTELTNKSFAEGINTKY
Ga0265309_1024975843300028599SedimentMTKELSPLQRSFKRINELLPDSDQVLLRCDLYTMCTELTNKSFAEGIN
Ga0307488_10000107103300031519Sackhole BrineMTKELSPLQRSFDRINELIPHSHDVLLRCSLYEMCVELTNKSFSEGINTKY
Ga0307379_1157244523300031565SoilMNKELSPLQRSFDRINELIPHSHDVLLRCSLYEMCVELTNKSFSEGINTKY
Ga0307376_1005542423300031578SoilMNKDLSPLQRSFDRINELIPHSHDALLRCSLYEMCVELTNKSFAEGINTKY


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