Metagenome Family F092063

Overview

Basic Information

• Family ID: F092063
• Family Type: Metagenome
• Number of Sequences: 107
• Average Sequence Length: 56 residues
• Representative Sequence: MSKMAELDLTIRDMLEEGYNPVSISVRLGIPLHFVYDILEYDQDMEELSPFNTVNS
• Number of Associated Samples: 62
• Number of Associated Scaffolds: 107

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 88.79 %
• % of genes near scaffold ends (potentially truncated): 11.21 %
• % of genes from short scaffolds (< 2000 bps): 64.49 %
• Associated GOLD sequencing projects: 45
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (46.729 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (55.140 % of family members)
• Environment Ontology (ENVO): Unclassified (81.308 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (87.850 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 20.24%
  β-sheet: 14.29%
  Coil/Unstructured: 65.48%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF10902	WYL_2	9.35
PF00534	Glycos_transf_1	3.74
PF03851	UvdE	2.80
PF01844	HNH	1.87
PF13692	Glyco_trans_1_4	0.93
PF00004	AAA	0.93
PF00270	DEAD	0.93
PF05050	Methyltransf_21	0.93
PF00149	Metallophos	0.93
PF13392	HNH_3	0.93
PF13489	Methyltransf_23	0.93
PF04055	Radical_SAM	0.93
PF13385	Laminin_G_3	0.93
PF02739	5_3_exonuc_N	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	2.80
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.93

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.27 %
Unclassified	root	N/A	46.73 %

Level 2

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	48.60 %
Unclassified	root	N/A	46.73 %
cellular organisms	root	All Organisms → cellular organisms	4.67 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	16.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.67 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	16.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	16.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.80 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	16.82 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.80 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	14.02 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	2.80 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.93 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14.02 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	2.80 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.93 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000756|JGI12421J11937_10003942	Not Available	5932
3300002098|JGI24219J26650_1017523	Not Available	1015
3300004693|Ga0065167_1082931	Not Available	553
3300004770|Ga0007804_1000562	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	13417
3300004772|Ga0007791_10168488	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634
3300004774|Ga0007794_10004332	Not Available	4331
3300004774|Ga0007794_10009463	All Organisms → cellular organisms → Bacteria → Proteobacteria	2920
3300004774|Ga0007794_10009813	Not Available	2862
3300004774|Ga0007794_10040007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	1400
3300004774|Ga0007794_10116033	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	799
3300004805|Ga0007792_10007399	Not Available	3548
3300004805|Ga0007792_10035737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	1506
3300004805|Ga0007792_10094724	Not Available	910
3300006484|Ga0070744_10002819	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5241
3300006805|Ga0075464_10242829	All Organisms → Viruses → Predicted Viral	1076
3300007555|Ga0102817_1123153	Not Available	574
3300007559|Ga0102828_1004332	All Organisms → Viruses → Predicted Viral	2711
3300008999|Ga0102816_1095875	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	904
3300009026|Ga0102829_1164438	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	713
3300009068|Ga0114973_10138519	Not Available	1360
3300009151|Ga0114962_10028635	All Organisms → Viruses → Predicted Viral	3846
3300009151|Ga0114962_10103073	All Organisms → Viruses → Predicted Viral	1775
3300009151|Ga0114962_10150009	All Organisms → Viruses → Predicted Viral	1402
3300009151|Ga0114962_10174388	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1275
3300009151|Ga0114962_10227068	All Organisms → Viruses → Predicted Viral	1076
3300009151|Ga0114962_10340786	Not Available	825
3300009152|Ga0114980_10060607	All Organisms → Viruses → Predicted Viral	2284
3300009154|Ga0114963_10171379	All Organisms → Viruses → Predicted Viral	1273
3300009155|Ga0114968_10627072	Not Available	567
3300009158|Ga0114977_10130680	All Organisms → Viruses → Predicted Viral	1507
3300009158|Ga0114977_10310577	Not Available	896
3300009158|Ga0114977_10480169	Not Available	682
3300009159|Ga0114978_10637080	Not Available	613
3300009161|Ga0114966_10009084	Not Available	8015
3300009161|Ga0114966_10051007	Not Available	2940
3300009161|Ga0114966_10607226	Not Available	609
3300009161|Ga0114966_10630431	Not Available	594
3300009163|Ga0114970_10251006	Not Available	1022
3300009164|Ga0114975_10034501	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3022
3300009164|Ga0114975_10149463	All Organisms → Viruses → Predicted Viral	1336
3300009164|Ga0114975_10720778	Not Available	526
3300009180|Ga0114979_10457756	Not Available	741
3300009181|Ga0114969_10348342	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	861
3300009182|Ga0114959_10449439	Not Available	626
3300009183|Ga0114974_10040844	All Organisms → Viruses → Predicted Viral	3151
3300009183|Ga0114974_10211306	All Organisms → Viruses → Predicted Viral	1180
3300010157|Ga0114964_10034401	All Organisms → Viruses → Predicted Viral	2757
3300010157|Ga0114964_10274775	Not Available	800
3300010157|Ga0114964_10366185	Not Available	681
3300010158|Ga0114960_10251541	All Organisms → Viruses	902
3300010160|Ga0114967_10155148	Not Available	1268
3300010334|Ga0136644_10738709	Not Available	532
3300010885|Ga0133913_11147723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	1997
3300010885|Ga0133913_11384087	All Organisms → Viruses → Predicted Viral	1791
3300010885|Ga0133913_11810518	Not Available	1528
3300012006|Ga0119955_1023052	All Organisms → Viruses → Predicted Viral	2143
3300013372|Ga0177922_11149880	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1016
3300021354|Ga0194047_10244698	Not Available	699
3300021438|Ga0213920_1010315	All Organisms → Viruses → Predicted Viral	2783
3300023174|Ga0214921_10069794	All Organisms → Viruses → Predicted Viral	2877
3300023184|Ga0214919_10000213	All Organisms → Viruses	100746
3300023184|Ga0214919_10038138	All Organisms → Viruses → Predicted Viral	4834
3300023184|Ga0214919_10053025	All Organisms → Viruses → Predicted Viral	3853
3300023184|Ga0214919_10110541	All Organisms → Viruses → Predicted Viral	2305
3300023184|Ga0214919_10235588	All Organisms → Viruses → Predicted Viral	1329
3300023184|Ga0214919_10334186	All Organisms → Viruses	1021
3300024346|Ga0244775_10003812	Not Available	15951
3300024346|Ga0244775_10006330	Not Available	11825
3300025436|Ga0208103_1004998	All Organisms → Viruses → Predicted Viral	2148
3300025466|Ga0208497_1007894	Not Available	2944
3300025595|Ga0208248_1001349	Not Available	6835
3300025595|Ga0208248_1004021	Not Available	3861
3300025595|Ga0208248_1005276	All Organisms → Viruses → Predicted Viral	3324
3300025595|Ga0208248_1008378	All Organisms → Viruses → Predicted Viral	2583
3300025595|Ga0208248_1079793	Not Available	733
3300025616|Ga0208613_1048900	Not Available	977
3300025616|Ga0208613_1064051	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	841
3300025896|Ga0208916_10157494	Not Available	977
3300025896|Ga0208916_10489839	Not Available	535
3300027712|Ga0209499_1003591	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9381
3300027733|Ga0209297_1191225	Not Available	817
3300027734|Ga0209087_1269924	Not Available	620
3300027736|Ga0209190_1000043	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	87100
3300027736|Ga0209190_1009581	Not Available	5843
3300027741|Ga0209085_1055821	Not Available	1818
3300027741|Ga0209085_1284751	Not Available	635
3300027746|Ga0209597_1189764	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	849
3300027749|Ga0209084_1063296	All Organisms → Viruses → Predicted Viral	1731
3300027749|Ga0209084_1130233	All Organisms → Viruses → Predicted Viral	1075
3300027749|Ga0209084_1220697	Not Available	752
3300027749|Ga0209084_1331545	Not Available	563
3300027749|Ga0209084_1362343	Not Available	528
3300027759|Ga0209296_1035790	All Organisms → Viruses → Predicted Viral	2697
3300027759|Ga0209296_1137339	All Organisms → Viruses → Predicted Viral	1115
3300027770|Ga0209086_10377543	Not Available	577
3300027782|Ga0209500_10009699	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5986
3300027797|Ga0209107_10021254	All Organisms → Viruses → Predicted Viral	3719
3300027797|Ga0209107_10160904	All Organisms → Viruses	1139
3300027899|Ga0209668_10050134	Not Available	2243
3300027969|Ga0209191_1002538	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11278
3300027969|Ga0209191_1171553	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	872
3300027969|Ga0209191_1309979	Not Available	582
3300027974|Ga0209299_1090227	Not Available	1213
3300028393|Ga0304728_1131659	Not Available	925
3300028394|Ga0304730_1149551	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	940
3300033992|Ga0334992_0160866	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1147
3300033995|Ga0335003_0094031	All Organisms → Viruses	1558

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	90.65%
Marine	Environmental → Aquatic → Marine	9.35%

Type

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	66.36%
Lentic	Environmental → Aquatic → Freshwater → Lentic	23.36%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.74%
Coastal	Environmental → Aquatic → Marine → Coastal	2.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.80%
Creek	Environmental → Aquatic → Freshwater → Creek	0.93%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	66.36%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	19.63%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.74%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.80%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.80%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.93%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	55.14%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	18.69%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.41%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.74%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	2.80%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.80%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.80%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.87%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.93%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.93%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.93%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental
3300004693	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA7.5M (version 2)	Environmental
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental
3300004772	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M	Environmental
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental
3300004805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M	Environmental
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental
3300010885	northern Canada Lakes Co-assembly	Environmental
3300012006	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B	Environmental
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental
3300024346	Whole water sample coassembly	Environmental
3300025436	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA7.5M (SPAdes)	Environmental
3300025466	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes)	Environmental
3300025595	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M (SPAdes)	Environmental
3300025616	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M (SPAdes)	Environmental
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental
3300028393	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG (v2)	Environmental
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100039427	3300000756	Freshwater And Sediment	MSKMAELDLSIRDMLEEGYNPVSISVRLGIPLHFIYDVLEYEQDMEELSPFNTVNS*
JGI24219J26650_10175231	3300002098	Lentic	MSKMADLDLTIRDMLEEGYNPVSISVRLGIPVHFVYDILEYEQESEDLSPFNTVNS*
Ga0065167_10829311	3300004693	Freshwater	MSKMAELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPYNTVNS*
Ga0007804_10005627	3300004770	Freshwater	MSKMAEIDSGIRDMLDEGYGPVAISVRLGIPVYFVYDILESDQEFEELNPFNTINS*
Ga0007791_101684882	3300004772	Freshwater	MSKMAELDMEIRDMLDEGFSPVSVSVRLNIPLTFVYDVLDSVQEDEDLSPFNTVNS*
Ga0007794_100043323	3300004774	Freshwater	MSKMADLDLSIRDMLEEGYNPVTVSVRLGIPLHFVYDILEYEQDMEELSPFNTVNS*
Ga0007794_100094637	3300004774	Freshwater	MSKMSELDLSIRDMIEEGYNPVTISVRLGIPVHFVYDILEDDQYGEDLSPYNTVNS*
Ga0007794_100098137	3300004774	Freshwater	MSKMADLDLSIRDMLDEGYNPVSISVRLGIPLHFVYDILEYEQDIEELSPFNTMNS*
Ga0007794_100400072	3300004774	Freshwater	MSKMAELDLTIRDMLDEGYNPVSISVRLGIPLHFVYDILEYEQGPEELSPYNTVNS*
Ga0007794_101160333	3300004774	Freshwater	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLYFVYDVLEYEKDMEELRPFNTVNS*
Ga0007792_100073993	3300004805	Freshwater	MAELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPYNTVNS*
Ga0007792_100357373	3300004805	Freshwater	MSKMADLDLSIRDMLDEGYNPVSISVRLGIPVHFLYDILEYEQGPEELSTYNTVNS*
Ga0007792_100947242	3300004805	Freshwater	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPLHFVYDILEYEQESEDLSPYNTVNS*
Ga0070744_100028193	3300006484	Estuarine	MSKMAELDLTIRDMLEEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS*
Ga0075464_102428292	3300006805	Aqueous	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLHFVYDVLEYDQESEDLSPFNTVNS*
Ga0102817_11231531	3300007555	Estuarine	IKMSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTIEFSNS*
Ga0102828_10043325	3300007559	Estuarine	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDILEYEQDIEELNPFNTIEFGNS*
Ga0102816_10958751	3300008999	Estuarine	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTIEFSNS*
Ga0102829_11644382	3300009026	Estuarine	MSKMADLDLSIRDMLDEGYNPVSISVRLGIPLHFIYDVLEYEQDIEELSPYNTVNS*
Ga0114973_101385193	3300009068	Freshwater Lake	MSKISELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS*
Ga0114962_100286354	3300009151	Freshwater Lake	MSKMADLDLTIRDMLDEGYNPVSISVRLGIPVHFLYDILEYEQGPEELSPYNTVNS*
Ga0114962_101030736	3300009151	Freshwater Lake	MSKISELDLTIRDMLEEGYGPVSISVRLGIPVYFVYDILSYDEDNEELSPFNTVNF*
Ga0114962_101500093	3300009151	Freshwater Lake	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLHFIYAVLEYEQDMEELSPFNTVNS*
Ga0114962_101743885	3300009151	Freshwater Lake	MSKMADLDLSIRDMLHEGYNPVSISVRLGIPLSFVYGVLEYEEDLEELNPFNTINS*
Ga0114962_102270683	3300009151	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVTISVRLGIPVHFVYGILEDDQYGEELSPFNTVNS*
Ga0114962_103407861	3300009151	Freshwater Lake	MSKMSELDLCIRDMLEEGYNPVSISVRLGIPVHFVYDVLEDDQYGEDLSPYNTVNS*
Ga0114980_100606072	3300009152	Freshwater Lake	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTIEFGNS*
Ga0114963_101713794	3300009154	Freshwater Lake	MSKMADLDLSIRDMLHEGYNPVSISVRLGIPLSFVYDVLEYEEDLEELNPFNTINS*
Ga0114968_106270721	3300009155	Freshwater Lake	KMSKISELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS*
Ga0114977_101306801	3300009158	Freshwater Lake	ISELDLTIRDMLEEGYSPVSISVRLGIPVYFVYDILSYDEDNEELSPFNTVNS*
Ga0114977_103105773	3300009158	Freshwater Lake	MSKMADLDLSIRDMLDEGYNPVSISVRLGIPVHFVYDVLEYDQEYEDFSPFNTVNS*
Ga0114977_104801691	3300009158	Freshwater Lake	MSKMADLDLSIRDMLEEGYSPVTVSVRLGIPLHFVYDILEYEQDMEELSPFNTVNS*
Ga0114978_106370803	3300009159	Freshwater Lake	IRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS*
Ga0114966_1000908413	3300009161	Freshwater Lake	MSKMADLDLSIRDMLEEGYSPVTVSVRLGIPLHFVYDILEDDQYGEDLSPYSTVNS*
Ga0114966_1005100710	3300009161	Freshwater Lake	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLYFVYDVLEYEKDMEELSPFNTVNS*
Ga0114966_106072261	3300009161	Freshwater Lake	MSKMAELDLSIRDMLEEGYNPITISVRLGIPVHFVYDILEDDQYGEELSPFNTVNS*
Ga0114966_106304311	3300009161	Freshwater Lake	MSKMAELDLTIRDMLEEGYNPVSISVRLGIPVHFVYDVLEYDQEYEDFSPFNTVNS*
Ga0114970_102510063	3300009163	Freshwater Lake	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLHFVYDILENDQYGEELSPFNTLNS*
Ga0114975_100345011	3300009164	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPFNTVNS*
Ga0114975_101494633	3300009164	Freshwater Lake	MSKMAELDLCIRDMLEEGYNPVSISVQLGIPVHFVYDILEDDQYGEELSPFNTVNS*
Ga0114975_107207782	3300009164	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEYDQYGEDLSPYNTVNS*
Ga0114979_104577563	3300009180	Freshwater Lake	MSKMADLDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTIEFGNS*
Ga0114969_103483421	3300009181	Freshwater Lake	MSKMADLDLTIRDMLDEGYGPVSISVRLGIPVYFVYDILEYEQDIEELNPFNTIEFGNS*
Ga0114959_104494392	3300009182	Freshwater Lake	MSELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEDLSPYNTVNS*
Ga0114974_1004084410	3300009183	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPLHFVYDILEYEQDMEELSPFNTVNS*
Ga0114974_102113063	3300009183	Freshwater Lake	MSKMADLDLSIRDMLEEGYSPVSISVRLGIPLHFVYDILEYEQDMEELSPFNTVNS*
Ga0114964_100344017	3300010157	Freshwater Lake	MSKISELDLTIRDMLEEGYGPVSISVRLGIPVYFVYDILSYDEDNEELSPFNTVNS*
Ga0114964_102747751	3300010157	Freshwater Lake	MSKMAELDLSIRDMLDEGYNPVSISVRLGIPLHFVYDILEYEQGPEEL
Ga0114964_103661853	3300010157	Freshwater Lake	MSKMSELDLCIRDMLEEGYNPVSISVRLGIPVHFVYDILEYDQYGE
Ga0114960_102515412	3300010158	Freshwater Lake	MSKMAELDLSIRDMLEEGYNPVSISVRLGIPLHFVYDILEYEQDMEELSPYNTVNS*
Ga0114967_101551485	3300010160	Freshwater Lake	ELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS*
Ga0136644_107387091	3300010334	Freshwater Lake	MSELDLSIRDMIEEGYNPVTISVRLGIPVHFVYDILEDDQYGEDLSPYNTVNS*
Ga0133913_111477233	3300010885	Freshwater Lake	MSKMAELDLGIRDMLDEGYNPVSISVRLGIPLHFVYDVLEQDQYPEEYSPFDTINS*
Ga0133913_113840874	3300010885	Freshwater Lake	MSKMAELDLCIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPFNTVNS*
Ga0133913_118105181	3300010885	Freshwater Lake	LSIRDMLEEGYSPVTVSVRLGIPLHFVYDILEYEQDMEELSPFNTVNS*
Ga0119955_10230525	3300012006	Freshwater	MSKMAELDLGIRDMLDEGYSPVSISVRLGIPLHFVYDVLEQDQYPEEYSPFDTINS*
Ga0177922_111498801	3300013372	Freshwater	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELSPFNTVNS*
Ga0194047_102446983	3300021354	Anoxic Zone Freshwater	MSKMSELDLCIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEDLSPYNTVNS
Ga0213920_10103153	3300021438	Freshwater	MSKMSELDLSIRDMIEEGYNPVTISVRLGIPVHFVYDILEDDQYGEDLSPYNTVNS
Ga0214921_100697944	3300023174	Freshwater	MSKMAELDMEIRDMLDEGFSPVSVSVRLNIPLTFVYDVLDSIQEDEDLSPFNTVNS
Ga0214919_10000213146	3300023184	Freshwater	MSKMAELDLCIRDMLEEGYNPVSISVRLGVPVHFVYDILEYDQYGEDLSPYNTVNS
Ga0214919_100381382	3300023184	Freshwater	MSKMAELDLGIRDMLDEGYSPVSISVRLGIPLHFVYDVLEQDQYPEEYSPFDTINS
Ga0214919_100530256	3300023184	Freshwater	MSKMAELDLGIRDMLDEGYNPVSISVRLGIPLYFVYDVLEYEKDMEELSPFNTVNS
Ga0214919_101105413	3300023184	Freshwater	MSKISELDLTIRDMLEEGYGPVSISVRLGIPVYFVYDILSYDEDNEELSPFNTVNS
Ga0214919_102355883	3300023184	Freshwater	MSKMAELDLSIRDMLEEGYNPVSISVRLGIPLHFIYDILEYDQYGEDLSPYNTVNS
Ga0214919_103341863	3300023184	Freshwater	MSKMADLDLSIRDMLEEGYNPVTISVRLGIPLHFVYDILEYEQDMEELSPYNTVNS
Ga0244775_1000381215	3300024346	Estuarine	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTIEFSNS
Ga0244775_100063308	3300024346	Estuarine	MSKMAELDLTIRDMLEEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS
Ga0208103_10049984	3300025436	Freshwater	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPYNTVNS
Ga0208497_10078945	3300025466	Freshwater	MSKMAEIDSGIRDMLDEGYGPVAISVRLGIPVYFVYDILESDQEFEELNPFNTINS
Ga0208248_10013497	3300025595	Freshwater	MSKMADLDLSIRDMLEEGYNPVTVSVRLGIPLHFVYDILEYEQDMEELSPFNTVNS
Ga0208248_10040219	3300025595	Freshwater	MSKMADLDLSIRDMLDEGYNPVSISVRLGIPLHFVYDILEYEQDIEELSPFNTMNS
Ga0208248_10052768	3300025595	Freshwater	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPVHFVYDVLEYDQESEDLSPFNTVNS
Ga0208248_10083786	3300025595	Freshwater	MAELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPYNTVNS
Ga0208248_10797932	3300025595	Freshwater	MSKMAELDLTIRDMLDEGYNPVSISVRLGIPLHFVYDILEYEQGPEELSPYNTVNS
Ga0208613_10489003	3300025616	Freshwater	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPLHFVYDILEYEQESEDLSPYNTVNS
Ga0208613_10640511	3300025616	Freshwater	MSKMAELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPYNTVNS
Ga0208916_101574944	3300025896	Aqueous	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLHFVYDVLEYDQESEDLSPFNTVNS
Ga0208916_104898392	3300025896	Aqueous	MSKMAELDLTIRDMLEEGYNPVSISVRLGIPLHFIYDILEYEQDMEELSPYNTVNS
Ga0209499_10035911	3300027712	Freshwater Lake	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPLHFIYAVLEYEQDMEELSPFNTVNS
Ga0209297_11912252	3300027733	Freshwater Lake	MSKMADLDLSIRDMLDEGYNPVSISVRLGIPVHFVYDVLEYDQEYEDFSPFNTVNS
Ga0209087_12699242	3300027734	Freshwater Lake	EYIKMSKISELDLTIRDMLEEGYSPVSISVRLGIPVYFVYDILSYDEDNEELSPFNTVNS
Ga0209190_1000043106	3300027736	Freshwater Lake	MSKMADLDLSIRDMLEEGYSPVTVSVRLGIPLHFVYDILEDDQYGEDLSPYSTVNS
Ga0209190_100958112	3300027736	Freshwater Lake	MSKISELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPYNTVNS
Ga0209085_10558216	3300027741	Freshwater Lake	MSKMADLDLSIRDMLHEGYNPVSISVRLGIPLSFVYDVLEYEEDLEELNPFNTINS
Ga0209085_12847512	3300027741	Freshwater Lake	MSKMADLDLTIRDMLDEGYNPVSISVRLGIPVHFLYDILEYEQGPEELSPYNTVNS
Ga0209597_11897643	3300027746	Freshwater Lake	MSKMAELDMEIRDMLDEGFSPVSVSVRLNIPLTFVYDVLDSVQEDEDLSPFNTVNS
Ga0209084_10632963	3300027749	Freshwater Lake	MSKISELDLTIRDMLEEGYGPVSISVRLGIPVYFVYDILSYDEDNEELSPFNTVNF
Ga0209084_11302333	3300027749	Freshwater Lake	MSKMADLDLSIRDMLHEGYNPVSISVRLGIPLSFVYGVLEYEEDLEELNPFNTINS
Ga0209084_12206973	3300027749	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEDDQYGEELSPFNTVNS
Ga0209084_13315452	3300027749	Freshwater Lake	MSKMAELDLGIRDMLDEGYNPVSISVRLGIPLHFVYDVLEQDQYPEEYSPFDTINS
Ga0209084_13623432	3300027749	Freshwater Lake	MSKMADLDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEYDQESEDLSPFNTVNS
Ga0209296_10357906	3300027759	Freshwater Lake	MSKMADLDLSIRDMLEEGYSPVSISVRLGIPLHFVYDILEYEQDMEELSPFNTVNS
Ga0209296_11373392	3300027759	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPLHFVYDILEYEQDMEELSPFNTVNS
Ga0209086_103775431	3300027770	Freshwater Lake	MSKMAELDLSIRDMLEEGYNPITISVRLGIPVHFVYDILEDDQYGEELSPFNT
Ga0209500_1000969911	3300027782	Freshwater Lake	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTIEFGNS
Ga0209107_100212547	3300027797	Freshwater And Sediment	MSKMAELDLSIRDMLEEGYNPVSISVRLGIPLHFIYDVLEYEQDMEELSPFNTVNS
Ga0209107_101609041	3300027797	Freshwater And Sediment	MSKMAELDLTIRDMLEEGYNPVSISVRLGIPLHFVYDILEYDQDMEELSPFNTVNS
Ga0209668_100501346	3300027899	Freshwater Lake Sediment	MSKMAELDLTIRDMLDEGYNPVSISVRLGIPVHFVYDVLEYDSDVEELNPFNTVNS
Ga0209191_10025383	3300027969	Freshwater Lake	MSKMAELDLCIRDMLEEGYNPVSISVQLGIPVHFVYDILEDDQYGEELSPFNTVNS
Ga0209191_11715532	3300027969	Freshwater Lake	MSKMAELDLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTVNS
Ga0209191_13099792	3300027969	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVSISVRLGIPVHFVYDILEYDQYGEDLSPYNTVNS
Ga0209299_10902271	3300027974	Freshwater Lake	DLTIRDMLDEGCNPVSISVQLGIPLYFVYDVLEYEQDMEELNPFNTVNS
Ga0304728_11316592	3300028393	Freshwater Lake	MSKMSELDLSIRDMLEEGYNPVTISVRLGIPVHFVYGILEDDQYGEELSPFNTVNS
Ga0304730_11495513	3300028394	Freshwater Lake	MSKMADLDLTIRDMLDEGYGPVSISVRLGIPVYFVYDILEYEQDIEELNPFNTIEFGNS
Ga0334992_0160866_807_977	3300033992	Freshwater	MSKISELDLTIRDMLEEGYGPVTISVRLGIPVYFVYDILSYDEDNQELSPFNTVNS
Ga0335003_0094031_1336_1506	3300033995	Freshwater	MSKISELDLTIRDMLEEGYGPVSISVRLGIPVYFVYDILSYDEDNQELSPFNTVNS