Metagenome Family F092059

Basic Information
Family ID	F092059
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	47 residues
Representative Sequence	MWLQNNFKLVMIGGLALIVGLSFMEARKTHKEIKKGEAQWLLKKKKK
Number of Associated Samples	70
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	31.82 %
% of genes near scaffold ends (potentially truncated)	1.87 %
% of genes from short scaffolds (< 2000 bps)	10.28 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (95.327 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (15.888 % of family members)
Environment Ontology (ENVO)	Unclassified (35.514 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (42.056 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 80.85% β-sheet: 0.00% Coil/Unstructured: 19.15%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13472	Lipase_GDSL_2	26.42
PF00303	Thymidylat_synt	2.83
PF06508	QueC	1.89
PF01464	SLT	1.89
PF13673	Acetyltransf_10	0.94
PF01592	NifU_N	0.94
PF00156	Pribosyltran	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	2.83
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	1.89
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	1.89
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	1.89
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.89
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	1.89
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	1.89
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.89
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	1.89
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	1.89
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
All Organisms	root	All Organisms	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
cellular organisms	root	All Organisms → cellular organisms	2.80 %
Viruses	superkingdom	All Organisms → Viruses	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.87 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.93 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	0.93 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.93 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.93 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.93 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.87 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.93 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.93 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005527\|Ga0068876_10208944	Not Available	1130	Open in IMG/M
3300007544\|Ga0102861_1051531	Not Available	1069	Open in IMG/M
3300008107\|Ga0114340_1005494	Not Available	8091	Open in IMG/M
3300008110\|Ga0114343_1026202	Not Available	3097	Open in IMG/M
3300008267\|Ga0114364_1044935	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	2503	Open in IMG/M
3300008267\|Ga0114364_1049253	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1521	Open in IMG/M
3300009059\|Ga0102830_1205669	Not Available	576	Open in IMG/M
3300017778\|Ga0181349_1208155	Not Available	672	Open in IMG/M
3300019784\|Ga0181359_1032061	Not Available	2032	Open in IMG/M
3300019784\|Ga0181359_1188539	Not Available	674	Open in IMG/M
3300020151\|Ga0211736_10178030	Not Available	2945	Open in IMG/M
3300021961\|Ga0222714_10144494	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1436	Open in IMG/M
3300023179\|Ga0214923_10000931	Not Available	42961	Open in IMG/M
3300024346\|Ga0244775_10001439	Not Available	27784	Open in IMG/M
3300024346\|Ga0244775_10016320	Not Available	6873	Open in IMG/M
3300024346\|Ga0244775_10555657	Not Available	934	Open in IMG/M
3300024348\|Ga0244776_10123910	All Organisms → Viruses → Predicted Viral	1908	Open in IMG/M
3300027320\|Ga0208923_1039050	Not Available	846	Open in IMG/M
3300028025\|Ga0247723_1001581	Not Available	13166	Open in IMG/M
3300028025\|Ga0247723_1009297	Not Available	3945	Open in IMG/M
3300028025\|Ga0247723_1017505	All Organisms → Viruses → Predicted Viral	2504	Open in IMG/M
3300031746\|Ga0315293_10150777	Not Available	1940	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.33%
Terrestrial	Environmental → Terrestrial	4.67%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	63.55%
Marine	Environmental → Aquatic → Marine	31.78%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	4.67%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	42.06%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	15.89%
Lentic	Environmental → Aquatic → Freshwater → Lentic	13.08%
Unclassified	Environmental → Aquatic → Marine → Unclassified	13.08%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.67%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	4.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.87%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.87%
Coastal	Environmental → Aquatic → Marine → Coastal	0.93%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.93%
Harbor	Environmental → Aquatic → Marine → Harbor	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	35.51%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	15.89%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	13.08%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	13.08%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	6.54%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.67%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	4.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Harbor → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	15.89%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	14.02%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	11.21%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	11.21%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.41%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	6.54%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	6.54%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	6.54%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.67%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	4.67%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.93%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.93%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.93%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.93%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.93%
Marine Harbor	Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300027211	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02 (SPAdes)	Environmental	Open in IMG/M
3300027224	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02 (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300029293	Marine harbor viral communities from the Indian Ocean - SCH2	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
NpDRAFT_103054642	3300000929	Freshwater And Marine	MWLQNNFKLVMIGGLALILGLSFMGARKTHKEIKKGEAQWLLKKKK*
B570J29032_1088147992	3300002408	Freshwater	VLKQMWIQNNFKLVMIAGLTLILGLSYSEARKTHKEIKKGEAQWLLKKKKK*
B570J29032_1088924673	3300002408	Freshwater	MWLQNNFKLVMIGGLTLILGLSCMEARKTHKQIKKGEAQWLLKKKKK*
Ga0069718_100288252	3300004481	Sediment	MWIQNNFKLVMIAGLTLILGLSYSEARKTHKEIKKGEAQWLLKKKKK*
Ga0068876_102089441	3300005527	Freshwater Lake	MWLQNNFNLVMIAGLTLIIGLSVGGARKTHKEIKKGEA
Ga0070744_100095182	3300006484	Estuarine	MWLQNNFKSIMNVGLALILGLSFMEARQTHKQIKKGEAQWLLKKKKKK*
Ga0070744_100308312	3300006484	Estuarine	MWLQNNFKSIMNAGLVLILGLSALGARQTHKEIKKGEAQWVLWKKHKKNK*
Ga0070744_100722842	3300006484	Estuarine	MWLQNNFKLVMIGGLTLILGLSFMEARKTHKQIKKGEAQWLLKKKK*
Ga0070744_101349542	3300006484	Estuarine	MWLQNNFKSIMNAGVALIIGLSALGARQTHKEIKKGETQWVLWKKHKKNK*
Ga0070749_102719462	3300006802	Aqueous	MWLQNNFKLVMIGGLALIVGLSYMEARKTHKEIKKGEAQWVFLKKNKKK*
Ga0102861_10515312	3300007544	Estuarine	MWLQNNFKSIMNAGLALILGLSFMEARQTHKEIKKGEAQWVIWKKHKKK*
Ga0102821_10452871	3300007557	Estuarine	MWLQNNFKLVMIGSLALILGLSFMEARQTHKEIKKGEAQWVLWKKHKKNK*
Ga0102828_10670121	3300007559	Estuarine	AGLVLILGLSALGARQTHKEIKKGEAQWVLWKKHKKNK*
Ga0102828_10670122	3300007559	Estuarine	MWLQNNFKSIMNAGLALIIGLSALGARQTHKEIKKGEAQWVLWKKHKKNK*
Ga0102871_12023622	3300007620	Estuarine	MWIRDNFNLVMIAGLTLILGLSYSEGRKTHKQIKKGEAQWLLKKKNKK*
Ga0102863_10612891	3300007622	Estuarine	NMWLQNNFKLVMIGGLALILGLSFMEARQTHKEIKKGEAQWVLWKKHKKNK*
Ga0114340_10054942	3300008107	Freshwater, Plankton	MWLQNNFNLVMIAGLTLIIGLSVGEARKTHKEIKKGEAQWLLKKKKK*
Ga0114343_10262022	3300008110	Freshwater, Plankton	MWLQNNFNWVMIAGLTLIIGLSVGEARKTHKEIKKGEAQWLLKKKKK*
Ga0114346_11295342	3300008113	Freshwater, Plankton	MWLQNNFKLVRIGGLALIVGLSFMEARKTHKEIKKGEAQWVFLKKDKKK*
Ga0114346_11633572	3300008113	Freshwater, Plankton	MWLQNNFKLVMIGGLALIVGLSFMEARKTHKQIKKGEAQWLLKKKNKK*
Ga0114355_10738674	3300008120	Freshwater, Plankton	MWLQNNFNLVMIAGLTLIIGLSVGGARKTHQEIKKGEAQWLLKKKKK*
Ga0114363_10004842	3300008266	Freshwater, Plankton	MWLQNNFNLVMIVGLTLIIGLSVGEARKTHKEIKKGEAQWLLKKKKK*
Ga0114364_10243376	3300008267	Freshwater, Plankton	MIAGLTLILGLSYSEARKTHKEIKKGEAQWLLKKKK
Ga0114364_10449352	3300008267	Freshwater, Plankton	MWLQNNFKLVMIGGLTLILGLSYMGARQTHKQIKKGEAQWLLKKNKKK*
Ga0114364_10492532	3300008267	Freshwater, Plankton	MWLQNNFKLVMIGGLALILGLSFMEARQTRKEIKKGEAQWVLWKKHKKNK*
Ga0114364_10647143	3300008267	Freshwater, Plankton	MWLQNNFKLVMIGGLALIVGLSFMEARKTHKEIKKGEAQWVFLKKDKKK*
Ga0114364_11198532	3300008267	Freshwater, Plankton	MIAGLTLILGLSYSEARKTHKEIKKGEAQWLLKKKKK*
Ga0114364_11619521	3300008267	Freshwater, Plankton	MWLQNNFKLVMIGGLALILGLSFMEARQTHKEIKKGEAQWVLWKKHKKNK*
Ga0114876_11408373	3300008448	Freshwater Lake	MWLQNNFKLVMIGGLTLILGLSYMGARQTHKQIKKGEAQWL
Ga0102811_12341922	3300009024	Estuarine	MWLQNNFKSIMNAGLVLILGLSALGARQTHKEIKKGEAQ
Ga0102829_10241142	3300009026	Estuarine	MWLQNNFKLVMIGGLALILGLSFMEARQTHKQIKKGEAQWLLKKKK*
Ga0102864_10492243	3300009051	Estuarine	LVMIAGLILILGLSYSEGRKTHKQIKKGEAQWLLKKKNKK*
Ga0102864_10886311	3300009051	Estuarine	MWLQNNFKLVMIGGLALILGLSFMEARQTHKQIKKGEAQWLLKKKKK*
Ga0102830_12056692	3300009059	Estuarine	MWLQNNFKSIMNVGLALILGLSFMEERQTHKQIKKGEAQWLLKKKKKK*
Ga0102815_104241231	3300009080	Estuarine	MIGSLALILGLSFMEARQTHKEIKKGEAQWVLWKKHKKNK*
Ga0105099_100834523	3300009082	Freshwater Sediment	MWLQNNFKLVMIGGLALIVGLSYMEARKTHKQIKKGEAQWVFLKKDKKK*
Ga0114974_104832682	3300009183	Freshwater Lake	MWLENNFKSIMNAGLALIIGLSALGARQTHKEIKKGEAQWVLWKKHKKNK*
Ga0151620_10205974	3300011268	Freshwater	MWLRNNFNLVIIASLGLIAGLSCLEARKTHKEIKKGEAQWLLKKKNKK*
Ga0151620_12328052	3300011268	Freshwater	MWIRDNFNLVMIASLTLILGLSYSEGRKTHKEIKKGEAQWLLKKKNK
Ga0153799_10383413	3300012012	Freshwater	MWLQNNFNWVMIAGLTLIIGLSVGEARKTHRKIKKGEPKWL*
Ga0153801_10062638	3300012017	Freshwater	MWLQNNFNWVMIAGLTLIIGLSVGDARKTHKEIKKGEAQWLLKKKKK*
Ga0164293_100447557	3300013004	Freshwater	MWLQNNFKLVMIGGLALILGLSFIEARQTHKEIKKGEAQWVLWKKHKKNK*
Ga0164293_100690067	3300013004	Freshwater	MWLQNNFKLVMIGGLALILGLSFMEARQTHKQIKKGEAQWLLKKKKNK*
Ga0164293_103634202	3300013004	Freshwater	MWIRNNFNLVMIAGLTLILGLSYSETRKTHKEIKKGEAQWLLK
Ga0164293_106443041	3300013004	Freshwater	QMWIQNNFKLVMIAGLTLILGLSYSEARKTHKEIKKGEAQWLLKKKKK*
Ga0164292_104251812	3300013005	Freshwater	MWLQNNFKLVMIGGLALILGLSFMGAKKTHKEIKKGEAQWLLKKKK*
Ga0164292_106018682	3300013005	Freshwater	MWLQNNFKLVMIGGLTLILGLSYMEAKKTHKQIKKGEAQWLLKKKKK*
(restricted) Ga0172367_100815893	3300013126	Freshwater	MWIQNNFKLVLIASLVLIAGLSYSEARKTHKEIKKGEAQWLLKKKKK*
Ga0177922_106149874	3300013372	Freshwater	MWLQNNFKLVMIGGLTLILGLSYMGARQTHKQIKKGEAQWLLKKKKK*
Ga0181338_10464382	3300015050	Freshwater Lake	MWLQNNFKLVMIGGLALILGLSFMGARKTHREIKKGEAQWLLKKKK*
Ga0181347_11109423	3300017722	Freshwater Lake	MWLQNNFKLVMIGGLTLILGLSYMGARQTHKQIKKGEAQWLLKKKKK
Ga0181344_11857212	3300017754	Freshwater Lake	MIGGLTLILGLSFMEARKTHKQIKKGEAQWLLKKKK
Ga0181357_12168541	3300017777	Freshwater Lake	QRVGLRSINYISGMWLQNNFKLVMIGGLALILGLSFMGARKTHKEIKKGEAQWLLKKKK
Ga0181349_11282211	3300017778	Freshwater Lake	MWLQNNFNLVMIAGLTLIIGLSVGGARKTHKEIKKG
Ga0181349_12081552	3300017778	Freshwater Lake	MWLQNNFKSIMNAGLALILGLSFMEARQTHKEIKKGEAQWVLWKKHKKNK
Ga0181349_12647831	3300017778	Freshwater Lake	MIGGLALILGLSFMGARKTHKEIKKGEAQWLLKKKK
Ga0181346_10864873	3300017780	Freshwater Lake	MWLQNNFKLVMIGGLTLILGLSYMEARKTHKQIKKGEAQWLLKKKK
Ga0181359_10320613	3300019784	Freshwater Lake	MWLQNNFNWVMIAGLTLIIGLSVGEARKTHKEIKKGEAQWLLKKKKK
Ga0181359_11885392	3300019784	Freshwater Lake	MWLQNNFNLVMIAGLTLIIGLSVGDARKTHKEIKKGEAQWLLKKKKK
Ga0211736_101780307	3300020151	Freshwater	MWIQNNFKLVMIAGLTLILGLSYSEARKTHKEIKKGEAQWLLKKKKK
Ga0211736_108688522	3300020151	Freshwater	MWLQNNFNLVMIAGLTLIIGLSVGGARKTHKEIKKGEAQWLLKKKKNK
Ga0211726_107738901	3300020161	Freshwater	QNNFNLVMIAGLTLIIGLSVGGARKTHKEIKKGEAQWLLKKKKK
Ga0211726_109765442	3300020161	Freshwater	MWIRNNFNLVMIAGLTLILGLSYSEARKTHKEIKKGEAQWLL
Ga0211729_113178652	3300020172	Freshwater	MWLQNNFKLVMIAGLTLILGLSFMEARKTHKEIKKGETQWLLKKKKNK
Ga0211731_110594632	3300020205	Freshwater	MWLQNNFKLVMIGGLALILGLSFMEARKTHKEIKKGEAQWLLKKKKNK
Ga0222714_101444942	3300021961	Estuarine Water	MWLQNNFKLVMIGGLALILGLSFMEARQTHKQIKKGEAQWLLKKKKKK
Ga0222714_104768222	3300021961	Estuarine Water	MWLRNNFNLVIIASLGLIAGLSCLEARKTHKEIKKGEAQWLLKKKNKK
Ga0222714_106799371	3300021961	Estuarine Water	MWLQNNFKLVMIGGLALIVGLSCMEARKTHKQIKKGEAQWVF
Ga0222712_101718353	3300021963	Estuarine Water	MIAGLTLIIGLSVGGARKTHKEIKKGEAQWLLKKKKNK
Ga0222712_106775532	3300021963	Estuarine Water	MIGGLTLILGLSYMEARKTHKQIKKGEAQWLLKKNK
Ga0222712_107870322	3300021963	Estuarine Water	MWLQNNFKLVMIGGLALILGLSFMGARKTHKEIKKGEAQWLLKKKK
Ga0222712_108370212	3300021963	Estuarine Water	MWLQNNFKLVMIGGLALIVGLSYMEARKTHKQIKKGEAQWVFLKKDKKK
Ga0181351_10989013	3300022407	Freshwater Lake	QNNFKLVMIGGLTLILGLSYMGARQTHKQIKKGEAQWLLKKKKK
Ga0214923_100009314	3300023179	Freshwater	MWLENNFKSIMNAGLALIIGLSALGARQTHKEIKKGEAQWVLWKKHKKNK
Ga0244775_1000143947	3300024346	Estuarine	MWLQNNFKSIMNVGLALILGLSFMEARQTHKQIKKGEAQWLLKKKKKK
Ga0244775_1001632013	3300024346	Estuarine	MWLQNNFKLVMIGSLALILGLSFMEARQTHKEIKKGEAQWVLWKKHKKNK
Ga0244775_105556572	3300024346	Estuarine	MWLQNNFKSIMNAGLALIIGLSALGAKQTHKEIKKGEAQWVLWKKHKKNK
Ga0244776_101239102	3300024348	Estuarine	MWIRDNFNLVMIAGLTLILGLSYSEGRKTHKQIKKGEAQWLLKKKNKK
Ga0244776_109211952	3300024348	Estuarine	MWLQNNFKSIMNAGLVLILGLSALGARQTHKEIKKGEAQWVLWKKHKKNK
Ga0208307_10531881	3300027211	Estuarine	MWLQNNFKLVMIGGLALILGLSFMEARQTHKQIKKGEAQWLLKKKKK
Ga0208164_10211892	3300027224	Estuarine	MWLQNNFKLVMIGGLALILGLSFMEARQTHKEIKKGEAQWVLWKKHKKNK
Ga0208923_10390502	3300027320	Estuarine	MWLQNNFKSIMNAGLALIIGLSALGARQTHKEIKKGEAQWVLWKKHKKNK
Ga0247723_100158125	3300028025	Deep Subsurface Sediment	MWLQNNFKLVMIGGLTLILGLSFMGARKTHKEIKKGEAQWLLKKKK
Ga0247723_10092972	3300028025	Deep Subsurface Sediment	MWLQNNFKLVMIGGLALIVGLSFMEARKTHKEIKKGEAQWLLKKKKK
Ga0247723_10175056	3300028025	Deep Subsurface Sediment	MWLQNNFNLVMIGGLTLILGLSFMGARQTHKEIKKGEAQWLLKKKNKK
Ga0247723_10595711	3300028025	Deep Subsurface Sediment	MWLQNNFKLVMIGGLALIIGLSYMEARKTHKQIKKGEAQWLLKKNKKK
Ga0247723_10837381	3300028025	Deep Subsurface Sediment	MWLQNNFNLVMIGGLTLILGLSFMGARQTHKEIKK
Ga0135211_10024612	3300029293	Marine Harbor	MRLRNNFNLVMIASLTLILGLSVGGARKTHKEIKKGEAQWLLKKKKK
Ga0315291_106011863	3300031707	Sediment	MWLQNNFKLVMIGGLALILGLSFMEARQTHKQIKKGEAQWVLWKKHKKNK
Ga0315293_101294691	3300031746	Sediment	MWLQNNFKLVMIGGLALILGLGFMGARKTHKEIKKGEAQWLLKKKK
Ga0315293_101507772	3300031746	Sediment	MWLQNNFKLVMIGGLALILGLSFMEARQTHKQIKKGEAQWLLKKKKNK
Ga0315907_105433113	3300031758	Freshwater	MWLQNNFKLVMIGGLALIVGLSFMEARKTHKEIKKGEAQWVFLKKDKKK
Ga0315899_111099552	3300031784	Freshwater	MWLQNNFNLVMIVGLTLIIGLSVGEARKTHKEIKKGEAQWLLKKKKK
Ga0315904_1000916531	3300031951	Freshwater	ENINYIKVIMWLQNNFNLVMIAGLTLIIGLSVGGARKTHKEIKKGEAQWLLKKKKK
Ga0315294_115857691	3300031952	Sediment	MWLQNNFKLVMISGLALILGLSFMEARQTHKEIKKGEAQWLLKKKK
Ga0315274_116997462	3300031999	Sediment	MWLQNNFKLVMIGGLALILGLSFMEARQTHKEIKKGEAQWLLKKKK
Ga0315905_100460807	3300032092	Freshwater	MIGGLALIVGLSFMEARKTHKEIKKGEAQWVFLKKDKKK
Ga0315903_108032631	3300032116	Freshwater	NNFKLVMIGGLALIVGLSYMEARKTHKEIKKGEAQWLLKKKKKIKYVD
Ga0315283_116665401	3300032164	Sediment	MWLQNNFKLVMIGGLALILGLSFMEARQTHKQIKKGEAQWLLK
Ga0334722_101032363	3300033233	Sediment	MWLQNNFKSIMNAGLALILGLSFIEARQTHKEIKKGEAQWVLWKKHKKNK
Ga0334994_0336182_256_399	3300033993	Freshwater	MWLQNNFKLVMIGGLTLILGLSCMEARKTHKQIKKGEAQWLLKKKKK
Ga0334994_0388025_377_523	3300033993	Freshwater	MWLQNNFKLVMIGGLALILGLSFMEARQTHKEIKKGEAQWLLKKKKNK
Ga0335005_0077188_199_345	3300034022	Freshwater	MWIQNNFKLVMIAGLTLILGLSYSEARKTHKEIKKGEAQWLLKKKNKK
Ga0334987_0840570_309_482	3300034061	Freshwater	MWLRDNFNLVMIGGLTLILGLSFMGARKTHKEIKKGDAEWVFLKKDNKNKIHKKVSK
Ga0335012_0241897_346_498	3300034093	Freshwater	MWLQNNFKLVMNVGLTLILGLSFMEARQTHKEIKKGEAQWVLWKKHKKNK
Ga0335068_0099548_1458_1631	3300034116	Freshwater	YNILLVLKQMWIQNNFKLVMIAGLTLILGLSYSEARKTHKEIKKGEAQWLLKKKNKK
Ga0335068_0556388_332_478	3300034116	Freshwater	MWLQNNFKLVMIGGLTLILGLSYMEARQTHKEIKKGEAQWLLKKKKNK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters