Metagenome / Metatranscriptome Family F092013

Basic Information
Family ID	F092013
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	50 residues
Representative Sequence	EQQRKNDAMTKWVETKKKSYCKSGIKYQVGYQPNPDPCATLTGATTTTTQ
Number of Associated Samples	93
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.80 %
% of genes near scaffold ends (potentially truncated)	96.26 %
% of genes from short scaffolds (< 2000 bps)	95.33 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (94.393 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (30.841 % of family members)
Environment Ontology (ENVO)	Unclassified (27.103 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.682 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF03819	MazG	84.11
PF03952	Enolase_N	12.15
PF13616	Rotamase_3	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0148	Enolase	Carbohydrate transport and metabolism [G]	12.15

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.05 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	85.05 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	72.90 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	8.41 %
Unclassified	root	N/A	5.61 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	72.90 %
Unclassified	root	N/A	5.61 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	72.90 %
Unclassified	root	N/A	5.61 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	72.90 %
Unclassified	root	N/A	5.61 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	72.90 %
Unclassified	root	N/A	5.61 %
unclassified Gaiella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	72.90 %
Unclassified	root	N/A	5.61 %
Gaiella sp. SCGC AG-212-M14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_11648562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300001536\|A1565W1_10403717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300004153\|Ga0063455_101493161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300004157\|Ga0062590_102158584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300004479\|Ga0062595_100042188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2005	Open in IMG/M
3300004480\|Ga0062592_102528537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300004643\|Ga0062591_102403934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300005180\|Ga0066685_10621274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300005184\|Ga0066671_10586447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300005355\|Ga0070671_100940337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300005367\|Ga0070667_102288996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300005447\|Ga0066689_10223527	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300005450\|Ga0066682_10976011	Not Available	501	Open in IMG/M
3300005468\|Ga0070707_101348373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300005526\|Ga0073909_10156373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300005544\|Ga0070686_101848236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300005552\|Ga0066701_10520901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300006046\|Ga0066652_100127218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2102	Open in IMG/M
3300006573\|Ga0074055_10018458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300006606\|Ga0074062_10047612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300006794\|Ga0066658_10478925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300006794\|Ga0066658_10577616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300006854\|Ga0075425_102167246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300006953\|Ga0074063_14217403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1137	Open in IMG/M
3300009012\|Ga0066710_102597257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300009012\|Ga0066710_103950208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300009088\|Ga0099830_11366078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300009098\|Ga0105245_12052200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300009137\|Ga0066709_101554422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	951	Open in IMG/M
3300009148\|Ga0105243_12124964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300010093\|Ga0127490_1041043	Not Available	507	Open in IMG/M
3300010322\|Ga0134084_10361504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300010401\|Ga0134121_12775381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300010905\|Ga0138112_1046177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	610	Open in IMG/M
3300012355\|Ga0137369_10651068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300012356\|Ga0137371_11316716	Not Available	534	Open in IMG/M
3300012356\|Ga0137371_11338646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300012362\|Ga0137361_10738623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	898	Open in IMG/M
3300012403\|Ga0134049_1200975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300012910\|Ga0157308_10403054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300012930\|Ga0137407_11280433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	696	Open in IMG/M
3300012930\|Ga0137407_12330015	Not Available	512	Open in IMG/M
3300012957\|Ga0164303_10212481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1080	Open in IMG/M
3300012976\|Ga0134076_10132482	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300012976\|Ga0134076_10632611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300012977\|Ga0134087_10121680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1112	Open in IMG/M
3300012986\|Ga0164304_11321423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300012988\|Ga0164306_10385486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1049	Open in IMG/M
3300012988\|Ga0164306_11418536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300013100\|Ga0157373_11130242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300013296\|Ga0157374_10191245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2002	Open in IMG/M
3300013296\|Ga0157374_11153903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	796	Open in IMG/M
3300013765\|Ga0120172_1065159	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300015356\|Ga0134073_10336632	Not Available	550	Open in IMG/M
3300015372\|Ga0132256_100616825	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300017654\|Ga0134069_1356260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300018027\|Ga0184605_10087802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1362	Open in IMG/M
3300018027\|Ga0184605_10332215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300018027\|Ga0184605_10497823	Not Available	531	Open in IMG/M
3300018051\|Ga0184620_10217268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300018054\|Ga0184621_10007432	All Organisms → cellular organisms → Bacteria	3065	Open in IMG/M
3300018081\|Ga0184625_10248196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	932	Open in IMG/M
3300018433\|Ga0066667_11290941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300019867\|Ga0193704_1033410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300019869\|Ga0193705_1036226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300019875\|Ga0193701_1022962	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300019882\|Ga0193713_1189598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300021510\|Ga0222621_1009676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1804	Open in IMG/M
3300025315\|Ga0207697_10452190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300025922\|Ga0207646_11473312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300025924\|Ga0207694_10601044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300025931\|Ga0207644_10776248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300025931\|Ga0207644_11777533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300025949\|Ga0207667_12016415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300025960\|Ga0207651_11008146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300026325\|Ga0209152_10100873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1087	Open in IMG/M
3300026343\|Ga0209159_1180866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300026538\|Ga0209056_10328257	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300026552\|Ga0209577_10850008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300027866\|Ga0209813_10447177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300027882\|Ga0209590_10262698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1103	Open in IMG/M
3300028704\|Ga0307321_1037223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	898	Open in IMG/M
3300028707\|Ga0307291_1190196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300028711\|Ga0307293_10203797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300028719\|Ga0307301_10226950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300028784\|Ga0307282_10544232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300028791\|Ga0307290_10272089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300028799\|Ga0307284_10241271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300028799\|Ga0307284_10321609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300028807\|Ga0307305_10076339	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300028810\|Ga0307294_10251947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300028811\|Ga0307292_10237754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300028814\|Ga0307302_10182934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1020	Open in IMG/M
3300028819\|Ga0307296_10137153	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300028824\|Ga0307310_10050325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1738	Open in IMG/M
3300028828\|Ga0307312_10080630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1989	Open in IMG/M
3300028828\|Ga0307312_10813358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300028872\|Ga0307314_10137360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300028878\|Ga0307278_10036807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2229	Open in IMG/M
3300028878\|Ga0307278_10054062	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300028881\|Ga0307277_10271791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300028881\|Ga0307277_10571630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300028884\|Ga0307308_10658753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300028885\|Ga0307304_10176303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	904	Open in IMG/M
3300031152\|Ga0307501_10262747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300031543\|Ga0318516_10797945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300032180\|Ga0307471_101147422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	942	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.05%
Host-Associated	Host-Associated	14.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.50%
Plants	Host-Associated → Plants	14.95%
Aquatic	Environmental → Aquatic	6.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.15%
Sediment	Environmental → Aquatic → Sediment	6.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.87%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.61%
Loam	Environmental → Terrestrial → Soil → Loam	3.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.87%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	30.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010093	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010905	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092013

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_116485622	3300000891	Soil	RDAMTKWVDDTKNKYCNSRIKYQVGYAPNPDPCATTGTTTSQ*
A1565W1_104037172	3300001536	Permafrost	AMTKWVETKKKSYCKSGIKYQIGYQPNPDPCATLTGATTTTTQ*
Ga0063455_1014931611	3300004153	Soil	IKQQLGQQKKNDKITKWLEDTKKSYCNGKIKYQVGYTPSPDPCVTLTGATSTSQ*
Ga0062590_1021585842	3300004157	Soil	QLEDQQKRDAMTKWVDDTKNKYCKSRIKYQVGFAPNPDPCVTTGTTTSQ*
Ga0062595_1000421881	3300004479	Soil	SIKQQLEQQRKNDEMTKWVEDKKKSYCKSGIKYQVGYQPNPDPCATVSGTTTTTSQ*
Ga0062592_1025285371	3300004480	Soil	DKITKWLEDTKKGYCGGKIKYQIGYEPNPDPCATLTGATSTSQ*
Ga0062591_1024039342	3300004643	Soil	QQLEQQRKNDAMTKWVDQKKKSYCKSGIKYQVGYQPNPDPCATVTGTTDRTTTSQ*
Ga0066685_106212741	3300005180	Soil	VEDKKKQYCGSKIKYQVGYEPNPQADPCASVTGTTTTSP*
Ga0066671_105864471	3300005184	Soil	LEQQRKNDKMTQWLANTKKDYCNGRIKYQVGYQPNPDPCASLTSTASTTG*
Ga0070671_1009403371	3300005355	Switchgrass Rhizosphere	KNDVMTRWVADKKKSYCKAGIKYQVGYQPNPDPCASVTGATTTTTQ*
Ga0070667_1022889961	3300005367	Switchgrass Rhizosphere	STTSLAKVKASIKQQLTQQKKNDKLTKWLEDTKKSYCGGKIKYQIGYTPNPDPCAALTGSTATSQ*
Ga0066689_102235273	3300005447	Soil	EAMTKWVDKKKQSFCKSGIKYQVGYQPNPDPCATLTGTTTTTSQ*
Ga0066682_109760111	3300005450	Soil	QRKNDKITKWLEETKKDYCSGKIKYQVGYQPNPDPCATLTSSTTSTQ*
Ga0070707_1013483732	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SQPLSKVSATIKTQLEQQRKNDKMTKWLTDTKKNYCNSRIKYQVGYQPSPDPCASVTSSTSTSK*
Ga0073909_101563732	3300005526	Surface Soil	KNESMTKWVDDKKKQYCKSGIKYQIGYQPNPDPCATLSGATTTTSQ*
Ga0070686_1018482361	3300005544	Switchgrass Rhizosphere	AIKPAQTTSLSKVESSIKQQLEQQRKNDVMTRWVADKKKSYCKAGIKYQVGYQPNPDPCASVTGATTTTTQ*
Ga0066701_105209012	3300005552	Soil	KKSFCKSGIKYQIGYQPNPDPCATLTGSTTTTTQ*
Ga0066652_1001272181	3300006046	Soil	SIRQQLEQQRKNDQITKWLDDTKKSYCNGKIKYQIGYQPSPDPCATLTGATSTSQ*
Ga0074055_100184581	3300006573	Soil	SIKQQLEQQRKNESMTKWVDDKKKQYCKSGIKYQIGYQPNPDPCATLSGSTTTTSQ*
Ga0074062_100476121	3300006606	Soil	SMTKWVDDKKKQYCKSGIKYQIGYQPNPDPCATLSGSTTTTSQ*
Ga0066658_104789251	3300006794	Soil	VDKKKQSFCKSGIKYQVGYQPNPDPCATLTGTTTTTSQ*
Ga0066658_105776161	3300006794	Soil	SGKVKASIKQQLEQQRKNDKMTQWLANTKKDYCNGRIKYQVGYQPNPDPCASLTSTASTTG*
Ga0075425_1021672461	3300006854	Populus Rhizosphere	DDTKKSYCNGKIKYQIGYQPNPDPCATVTGATSTSK*
Ga0074063_142174031	3300006953	Soil	QQLEQQRKNESMTKWVDDKKKQYCKSGIKYQIGYQPNPDPCATLSGSTTTTSQ*
Ga0066710_1025972571	3300009012	Grasslands Soil	NDLMTKWVENKKKSYCKSRIKYQVGYEPNPDPCASVTGATTTSP
Ga0066710_1039502081	3300009012	Grasslands Soil	SIKQQLEQQRKNDAMTKRVDDKKKSFCKSGIKYQIGYQPNPDPCATLTGSTTTTTQ
Ga0099830_113660781	3300009088	Vadose Zone Soil	DNKKTSFCKSGIKYQVGYQPSPDPCATLTGTTTTG*
Ga0105245_120522001	3300009098	Miscanthus Rhizosphere	KPASTTSLAKVKASIKQQLTQQKKNDKLTKWLEDTKKSYCGGKIKYQIGYTPNPDPCAALTGSTATSQ*
Ga0066709_1015544221	3300009137	Grasslands Soil	QKTPFDSVKASIKQQLEQQKKTEQVTKWDESTRKYFCGDTRIKYQVGYQPNPDPCAALTASTQTT*
Ga0105243_121249642	3300009148	Miscanthus Rhizosphere	VDDKKKQYCKSGIKYQIGYQPNPDPCATLSGSTTTTSQ*
Ga0127490_10410431	3300010093	Grasslands Soil	MKGPATSLSKVESSIRQQLEQQRKNEAMTKWVETKRKSYCKSGIKYQVGYQPNPDPCATV
Ga0134084_103615041	3300010322	Grasslands Soil	NDKVTKWLDDTKKSYCNGKIKYQIGYQPNPDPCATLTSSTATTG*
Ga0134121_127753811	3300010401	Terrestrial Soil	MTKWVDDKKKQYCKSGIKYQIGYQPNPDPCATLSGSTTTTSQ*
Ga0138112_10461771	3300010905	Grasslands Soil	VRASIQQQLEQQKKNDKITKWLEDTKKGYCNNKIKYQIGYQPSPDPCATLTGATSTSQ*
Ga0137369_106510681	3300012355	Vadose Zone Soil	KNDKITKWLEDTKKDYCSGKIKYQVGYQPNPDPCATLTSSTTSTQ*
Ga0137371_113167162	3300012356	Vadose Zone Soil	SLSKVESSIKQQLEQQRKNDAMTKWVETKKKSFCKSGIKYQVGYQPNPDPCATLTGTTTTG*
Ga0137371_113386461	3300012356	Vadose Zone Soil	DKKKKSYCKSGIKYQVGYQPNPDPCATVTGTTTTTSQ*
Ga0137361_107386231	3300012362	Vadose Zone Soil	KKKSFCKSGIKYQVGYQPNPDPCATLTGSTTTTTQ*
Ga0134049_12009751	3300012403	Grasslands Soil	MTKWVETKKKSFCKSGIKYQVGYQPNPDPCATLTGTTTTG
Ga0157308_104030541	3300012910	Soil	TKWVETKKKSYCRSGIKYQVGYQPNPDPCATLPGATTTTTQ*
Ga0137407_112804332	3300012930	Vadose Zone Soil	VMTKWVDKKKKSYCKSGIKYQVGYQPNPDPCATLTGTTTTTSQ*
Ga0137407_123300152	3300012930	Vadose Zone Soil	MTKWVDKKKKSYCKSGIKYQVGYQPNPDPCATLTGTTTTTSQ*
Ga0164303_102124811	3300012957	Soil	LADTKKSYCGGKIKYQIGYQPNPDPCATLTGSTSTTQ*
Ga0134076_101324822	3300012976	Grasslands Soil	LSKVESSIKQQLEQQRKNDAMTKWVETKKTSFCKSGIKYQVGYQPNPDPCATLTGTTTTG
Ga0134076_106326112	3300012976	Grasslands Soil	QQRKNDAMTKWVETKKTSFCKSGIKYQVGYQPNPDPCATVTGATTTTSQ*
Ga0134087_101216802	3300012977	Grasslands Soil	MTKWVDDKKKSFCRSGIKYQIGYQPNPDPCATLTGSTTTTTQ*
Ga0164304_113214231	3300012986	Soil	SKVESSIKQQLEQQRKNDVMTKWVTDKKKSYCKAGIKYQVGYQPNPDPCASVTGATTTTTQ*
Ga0164306_103854861	3300012988	Soil	NDEITKWLADTKKSYCGGKIKYQIGYQPNPDPCATLTGSTSTTQ*
Ga0164306_114185362	3300012988	Soil	ADKKKSYCKAGIKYQVGYQPNPDPCASVTGATTTTTQ*
Ga0157373_111302421	3300013100	Corn Rhizosphere	QQRKNDAMTKWVETKKKSYCKAGIKYQVGYQPNPDPCATLPGATTTTSQ*
Ga0157374_101912453	3300013296	Miscanthus Rhizosphere	QLEQQRKNDVMTRWVADKKKSYCKAGIKYQVGYQPNPDPCASVTGATTTTTQ*
Ga0157374_111539031	3300013296	Miscanthus Rhizosphere	AKVKASIKQQLTQQKKNDKLTKWLEDTKKSYCGGKIKYQIGYTPNPDPCAALTGSTATSQ
Ga0120172_10651592	3300013765	Permafrost	MSKVEASIKGQLEQQRKNDAMTKWVEDTKKDYCKSRIKYQVGYRPNPDPCLTTGTTTSQ*
Ga0134073_103366322	3300015356	Grasslands Soil	DNKKSYCNGKIKYQVGYQPSPDPCATLTGATSTSQ*
Ga0132256_1006168251	3300015372	Arabidopsis Rhizosphere	QQLEQQKKNDEITKWLENTKKSYCGGKIKYQVGYQPNPDPCAAVTNAATTG*
Ga0134069_13562601	3300017654	Grasslands Soil	KKQYCGSKIKYQVGYEPNPQADPCASVTGATTTSP
Ga0184605_100878021	3300018027	Groundwater Sediment	QQLEQQKKNQVMTKWVDKKKKSYCKSGIKYQVGYQPNPDPCATLTGTTTTTSQ
Ga0184605_103322152	3300018027	Groundwater Sediment	AMTKWVETKKKSYCKSGIKYQVGYQPNPDPCATVTGATTTTTQ
Ga0184605_104978231	3300018027	Groundwater Sediment	TKWVETKRKSYCKSGIKYQVGYQPNPDPCATVTGATTTTSQ
Ga0184620_102172682	3300018051	Groundwater Sediment	AMTKWVETKKKSYCKSGIKYQVGYQPNPDPCATLPGATTTTTQ
Ga0184621_100074321	3300018054	Groundwater Sediment	KQQLEQQKKNEVMTKWVDKKKQTYCKSGIKYQVGYQPNPDPCATVTGTTTTTSQ
Ga0184625_102481962	3300018081	Groundwater Sediment	QQRKNESMTKWVDDKKKQYCKSGIKYQIGYQPNPDPCATLSGSTTTTSQ
Ga0066667_112909411	3300018433	Grasslands Soil	KNELMTNWVNDMKKKYCKPGGIKYAQGYQPTPDPCASVSGTTTTTK
Ga0193704_10334101	3300019867	Soil	QLEQQRKNDKVTKWLADTKKGYCGGKIKYQVGYQPNPDPCVTLTNSTTTSQ
Ga0193705_10362263	3300019869	Soil	EQQRKNDKVTKWLADTKKGYCGGKIKYQVGYQPNPDPCVTLTNSTTTSQ
Ga0193701_10229621	3300019875	Soil	SLDKVRASIKQQLEQQRKNDKVTKWLADTKKGYCGGKIKYQVGYQPNPDPCVTLTNSTTTSQ
Ga0193713_11895981	3300019882	Soil	KNESMTKWVDDKKKQYCKSGIKYQIGYQPNPDPCATLSGSTTTTSQ
Ga0222621_10096763	3300021510	Groundwater Sediment	SKVQASIKQQLEQQHKNDAMTKWVDKKKQTYCKSGIKYQVGYQPNPDPCATVTGTTTTTS
Ga0207697_104521901	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	IRQQLEQQRKNESMTKWVDDKKKQYCKSGIKYQIGYQPNPDPCATLSGSTTTTSQ
Ga0207646_114733122	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	QQLEQQRKNESMTKWVDDKKKQYCKSGIKYQIGYQPNPDPCAQYTATTTTPTTTG
Ga0207694_106010442	3300025924	Corn Rhizosphere	SMTKWVDDKKKQYCKSGIKYQIGYQPNPDPCATLSGSTTTTSQ
Ga0207644_107762482	3300025931	Switchgrass Rhizosphere	KVEASIKQQLEQQRKNDVMTRWVADKKKSYCKAGIKYQVGYQPNPDPCASVTGATTTTTQ
Ga0207644_117775332	3300025931	Switchgrass Rhizosphere	AIKPASTTSLAKVKASIKQQLTQQKKNDKLTKWLEDTKKSYCGGKIKYQIGYTPNPDPCAALTGSTATSQ
Ga0207667_120164152	3300025949	Corn Rhizosphere	TTSLAKVKASIKQQLTQQKKNDKLTKWLEDTKKSYCGGKIKYQIGYTPNPDPCAALTGSTATSQ
Ga0207651_110081461	3300025960	Switchgrass Rhizosphere	EQQRKNESMTKWVDDKKKQYCKSGIKYQIGYQPNPDPCATLSGSTTTTSQ
Ga0209152_101008731	3300026325	Soil	SGKVKASIKQQLEQQRKNDKMTQWLANTKKDYCNGRIKYQVGYQPNPDPCASLTSTASTT
Ga0209159_11808661	3300026343	Soil	QQLEQQRKNDVMTKWVEKKKKSFCKSGIKYQVGYQPNPDPCATLTGTTTTTTQ
Ga0209056_103282571	3300026538	Soil	ESTKWLENTKKDYCGGRIKYQVGYQPNPDPCATVTSSTSTG
Ga0209577_108500081	3300026552	Soil	VMTKWVDQKKKDYCKSSIKYQVGYAPNPDPCASTTAATTTSQ
Ga0209813_104471771	3300027866	Populus Endosphere	VTKWLDDTKKSYCNGKIKYQIGYQPNPDPCATVTGATSTSK
Ga0209590_102626983	3300027882	Vadose Zone Soil	KQQLEQQKKNDVMTKWVDDKKKSFCKSGIKYQVGYQPSPDPCATLTGTTTTG
Ga0307321_10372231	3300028704	Soil	SIKQQLEQQRKNDAMTKWVDTKKKSYCKSGIKYQVGYQPNPDPCATLPGATTTTTQ
Ga0307291_11901962	3300028707	Soil	EQQRKNDAMTKWVETKKKSYCKSGIKYQVGYQPNPDPCATLTGATTTTTQ
Ga0307293_102037972	3300028711	Soil	QQLEQQRKNEAMTKWVETKRKSYCKSGIKYQVGYQPNPDPCATVTGATTTTSQ
Ga0307301_102269502	3300028719	Soil	ASIKQQLEQQRKNDKVTKWLADTKKNYCGGKIQYQVGYQPNPDPCVTLTNSTTTSQ
Ga0307282_105442322	3300028784	Soil	LAKVEKTIKQNLEDQQKRDAMTRWVQDKTKNYCKSGIKYQVGYAPVNDPCLTTGTTTSK
Ga0307290_102720891	3300028791	Soil	QASIKQQLEQQRKNESMTKWVDDKKKQYCKSGIKYQIGYQPNPDPCATLSGSTTTTSQ
Ga0307284_102412712	3300028799	Soil	KWVETKKKSYCKSGIKYQVGYQPNPDPCATLPGATTTTTQ
Ga0307284_103216091	3300028799	Soil	VETSIKQNLEDQQKRDAMTKWVQDKTKSYCKSGIKYQVGYAPVNDPCLTTGTTTSQ
Ga0307305_100763391	3300028807	Soil	PLAKVEKSIKQNLEDQQKRDAMTKWVQDKTKSYCKSGIKYQVGYAPVNDPCLTTGTTTSQ
Ga0307294_102519471	3300028810	Soil	SIKTQLEQQRKNDAMTKWVETKKKSYCKSGIKYQVGYQPNPDPCATLTGATTTTTQ
Ga0307292_102377542	3300028811	Soil	KTQLEQQRKNDAMTKWVETKKKSYCKSGIKYQVGYQPNPDPCATLPGATTTTTQ
Ga0307302_101829341	3300028814	Soil	QQLEQQQKNDKVTKWLADTKKNYCGGKIQYQVGYQPNPDPCVTLTNSTTTSQ
Ga0307296_101371531	3300028819	Soil	QLEQQRKNDAMTKWVETKKKSYCKSGIKYQVGYQPNPDPCATLPGATTTTTQ
Ga0307310_100503253	3300028824	Soil	VMTKWVDKKKKSYCKSGIKYQVGYQPNPDPCATLTGTTTTTSQ
Ga0307312_100806301	3300028828	Soil	QQLEQQKKNEVMTKWVDKKKKSYCKSGIKYQVGYQPNPDPCATLTGTTTTTSQ
Ga0307312_108133581	3300028828	Soil	QQRKNDKVTKFLEDTKKTYCGGKIKYQIGYQPNPDPCATLTGASSTSQ
Ga0307314_101373602	3300028872	Soil	KQQLEQQRKNDAMTKWVETKKKSYCKSGIKYQVGYQPNPDPCATLTGATTTTTQ
Ga0307278_100368071	3300028878	Soil	LEQQRKNEAMTTWVETKRKSYCKSGIKYQVGYQPNPDPCATVTGATTTTSQ
Ga0307278_100540623	3300028878	Soil	QRKNDKVTKWLADTKKDYCGGKIKYQVGYQPNPDPCVTLTNSTTTSQ
Ga0307277_102717911	3300028881	Soil	EQQRKNEAMTKWVETKRKSYCKSGIKYQVGYQPNPDPCATVTGATTTTSQ
Ga0307277_105716301	3300028881	Soil	KQQLEQQQKNDKVTKWLADTKKNYCGGKIQYQVGYQPNPDPCVTLTNSTTTSQ
Ga0307308_106587531	3300028884	Soil	KKKSYCKSGIKYQVGYQPNPDPCATLTGTTTTTSQ
Ga0307304_101763032	3300028885	Soil	LAKVEKSIKQNLEDQQKRDAMTKWVQDKTKSYCKSGIKYQVGYAPVNDPCLTTGTTTSQ
Ga0307501_102627472	3300031152	Soil	MTKWVETKKKSYCKSGIKYQVGYQPNPDPCATLPGATTTTTQ
Ga0318516_107979452	3300031543	Soil	QKKNDEITKWLTDTKKSYCSGKIKYQVGYQPSPDPCSTLTNATTTG
Ga0307471_1011474222	3300032180	Hardwood Forest Soil	LEQQRKNESMTKWVDDKKKQYCKSGIKYQIGYQPNPDPCATLSGSTTTTSQ

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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