Metagenome / Metatranscriptome Family F091948

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F091948
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	79 residues
Representative Sequence	VKRSTTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGMPALRARLGKRPRRRLSLVEHFKRLKGLELPPYLD
Number of Associated Samples	80
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.38 %
% of genes near scaffold ends (potentially truncated)	30.84 %
% of genes from short scaffolds (< 2000 bps)	78.50 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (94.393 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.757 % of family members)
Environment Ontology (ENVO)	Unclassified (26.168 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.533 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.38% β-sheet: 0.00% Coil/Unstructured: 59.62%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01850	PIN	38.32
PF11453	DUF2950	3.74
PF04551	GcpE	2.80
PF02378	PTS_EIIC	1.87
PF13174	TPR_6	1.87
PF00248	Aldo_ket_red	0.93
PF07394	DUF1501	0.93
PF01695	IstB_IS21	0.93
PF01381	HTH_3	0.93
PF01409	tRNA-synt_2d	0.93
PF13560	HTH_31	0.93
PF02452	PemK_toxin	0.93
PF10282	Lactonase	0.93
PF01916	DS	0.93
PF00932	LTD	0.93
PF13188	PAS_8	0.93
PF05960	DUF885	0.93
PF07519	Tannase	0.93
PF02823	ATP-synt_DE_N	0.93
PF00144	Beta-lactamase	0.93
PF06347	SH3_4	0.93
PF00160	Pro_isomerase	0.93
PF00005	ABC_tran	0.93
PF13701	DDE_Tnp_1_4	0.93
PF00401	ATP-synt_DE	0.93
PF00578	AhpC-TSA	0.93
PF00440	TetR_N	0.93
PF00155	Aminotran_1_2	0.93
PF16126	DUF4838	0.93
PF13432	TPR_16	0.93
PF00873	ACR_tran	0.93
PF14282	FlxA	0.93
PF00582	Usp	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0821	4-hydroxy-3-methylbut-2-enyl diphosphate synthase IspG/GcpE	Lipid transport and metabolism [I]	2.80
COG0355	FoF1-type ATP synthase, epsilon subunit	Energy production and conversion [C]	1.87
COG0016	Phenylalanyl-tRNA synthetase alpha subunit	Translation, ribosomal structure and biogenesis [J]	0.93
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.93
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.93
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1899	Deoxyhypusine synthase	Translation, ribosomal structure and biogenesis [J]	0.93
COG2024	O-phosphoseryl-tRNA(Cys) synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.93
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.93
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.39 %
Unclassified	root	N/A	5.61 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	70.09 %
Unclassified	root	N/A	5.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	69.16 %
Unclassified	root	N/A	5.61 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	57.94 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	7.48 %
Unclassified	root	N/A	5.61 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.94 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	7.48 %
Unclassified	root	N/A	5.61 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.93 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.94 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	7.48 %
Unclassified	root	N/A	5.61 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.93 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.94 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	6.54 %
Unclassified	root	N/A	5.61 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	0.93 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.93 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.94 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5.61 %
Unclassified	root	N/A	5.61 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.93 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.93 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.94 %
Unclassified	root	N/A	5.61 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	0.93 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.93 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.93 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003319\|soilL2_10317569	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1238	Open in IMG/M
3300005172\|Ga0066683_10442125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300005446\|Ga0066686_10080683	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300005446\|Ga0066686_10508497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	820	Open in IMG/M
3300005557\|Ga0066704_10682783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300005561\|Ga0066699_10166692	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300005591\|Ga0070761_10254895	Not Available	1049	Open in IMG/M
3300005591\|Ga0070761_10364556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	877	Open in IMG/M
3300005591\|Ga0070761_10897518	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300005712\|Ga0070764_10791477	Not Available	589	Open in IMG/M
3300006638\|Ga0075522_10208199	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300009012\|Ga0066710_100373115	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300009012\|Ga0066710_100455994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1918	Open in IMG/M
3300009012\|Ga0066710_100960929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1317	Open in IMG/M
3300009012\|Ga0066710_101358898	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1102	Open in IMG/M
3300009012\|Ga0066710_102010850	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	856	Open in IMG/M
3300009012\|Ga0066710_104194250	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300009137\|Ga0066709_100707711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1449	Open in IMG/M
3300009137\|Ga0066709_103077462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300009502\|Ga0114951_10039657	All Organisms → cellular organisms → Bacteria	2923	Open in IMG/M
3300009547\|Ga0116136_1122946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	666	Open in IMG/M
3300009630\|Ga0116114_1020269	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300010333\|Ga0134080_10205195	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	855	Open in IMG/M
3300010391\|Ga0136847_10860245	All Organisms → cellular organisms → Bacteria	1898	Open in IMG/M
3300010398\|Ga0126383_11132742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	872	Open in IMG/M
3300011120\|Ga0150983_15580883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300012202\|Ga0137363_10171943	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300012203\|Ga0137399_10277581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1380	Open in IMG/M
3300012203\|Ga0137399_10834902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	776	Open in IMG/M
3300012205\|Ga0137362_11756604	Not Available	507	Open in IMG/M
3300012207\|Ga0137381_11023588	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300012207\|Ga0137381_11405529	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300012210\|Ga0137378_10728868	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300012210\|Ga0137378_10747654	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	890	Open in IMG/M
3300012210\|Ga0137378_11139121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	695	Open in IMG/M
3300012211\|Ga0137377_10669651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	973	Open in IMG/M
3300012356\|Ga0137371_11194769	Not Available	568	Open in IMG/M
3300012362\|Ga0137361_10706330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	921	Open in IMG/M
3300012469\|Ga0150984_119895888	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300012683\|Ga0137398_10026785	All Organisms → cellular organisms → Bacteria	3212	Open in IMG/M
3300012922\|Ga0137394_10629707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	906	Open in IMG/M
3300012923\|Ga0137359_10371542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1270	Open in IMG/M
3300012923\|Ga0137359_11196574	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300012944\|Ga0137410_11153776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	665	Open in IMG/M
3300013296\|Ga0157374_10709576	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300014151\|Ga0181539_1031332	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2741	Open in IMG/M
3300014151\|Ga0181539_1165977	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300014155\|Ga0181524_10038926	All Organisms → cellular organisms → Bacteria	3160	Open in IMG/M
3300014159\|Ga0181530_10200624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1098	Open in IMG/M
3300014159\|Ga0181530_10335327	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	784	Open in IMG/M
3300014162\|Ga0181538_10639297	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	553	Open in IMG/M
3300014491\|Ga0182014_10627754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300014493\|Ga0182016_10002689	All Organisms → cellular organisms → Bacteria	20677	Open in IMG/M
3300014494\|Ga0182017_10627179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300014495\|Ga0182015_10467760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	808	Open in IMG/M
3300014495\|Ga0182015_10618013	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300014498\|Ga0182019_10787337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
3300014498\|Ga0182019_11336946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300014501\|Ga0182024_10010265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	19122	Open in IMG/M
3300014501\|Ga0182024_10141842	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3395	Open in IMG/M
3300014501\|Ga0182024_11231026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	873	Open in IMG/M
3300014838\|Ga0182030_10836057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	836	Open in IMG/M
3300014839\|Ga0182027_10115888	All Organisms → cellular organisms → Bacteria	3203	Open in IMG/M
3300014839\|Ga0182027_10652698	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1122	Open in IMG/M
3300015359\|Ga0134085_10384920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300017925\|Ga0187856_1065916	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300018003\|Ga0187876_1047754	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300018017\|Ga0187872_10037710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2657	Open in IMG/M
3300018033\|Ga0187867_10780050	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300018043\|Ga0187887_10705305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300018057\|Ga0187858_10446499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	797	Open in IMG/M
3300019082\|Ga0187852_1256046	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	706	Open in IMG/M
3300019278\|Ga0187800_1632825	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300020000\|Ga0193692_1003533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4073	Open in IMG/M
3300020016\|Ga0193696_1048353	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1124	Open in IMG/M
3300020581\|Ga0210399_10149204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1933	Open in IMG/M
3300020582\|Ga0210395_10144227	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1775	Open in IMG/M
3300021168\|Ga0210406_10568875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	888	Open in IMG/M
3300021171\|Ga0210405_10022852	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5055	Open in IMG/M
3300021181\|Ga0210388_10845544	Not Available	791	Open in IMG/M
3300022555\|Ga0212088_10128922	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300023101\|Ga0224557_1137558	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	922	Open in IMG/M
3300024323\|Ga0247666_1119028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300025862\|Ga0209483_1106728	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300026320\|Ga0209131_1124231	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1335	Open in IMG/M
3300026537\|Ga0209157_1353906	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300027853\|Ga0209274_10524676	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300027903\|Ga0209488_10069147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2616	Open in IMG/M
3300028536\|Ga0137415_11212749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300028798\|Ga0302222_10052166	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1657	Open in IMG/M
3300030399\|Ga0311353_10007935	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	12979	Open in IMG/M
3300030707\|Ga0310038_10346161	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300031234\|Ga0302325_11039077	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300031234\|Ga0302325_12015853	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300031525\|Ga0302326_11017404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1162	Open in IMG/M
3300031708\|Ga0310686_102175694	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3024	Open in IMG/M
3300031708\|Ga0310686_108397471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	10595	Open in IMG/M
3300031788\|Ga0302319_11191342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	705	Open in IMG/M
3300032256\|Ga0315271_10718089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	859	Open in IMG/M
3300033402\|Ga0326728_10002746	All Organisms → cellular organisms → Bacteria	57450	Open in IMG/M
3300033402\|Ga0326728_10014822	All Organisms → cellular organisms → Bacteria	16399	Open in IMG/M
3300033402\|Ga0326728_10035941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	8022	Open in IMG/M
3300033402\|Ga0326728_10798694	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300033405\|Ga0326727_10000520	All Organisms → cellular organisms → Bacteria	158217	Open in IMG/M
3300033983\|Ga0371488_0339477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	709	Open in IMG/M
3300034091\|Ga0326724_0096005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	1956	Open in IMG/M
3300034091\|Ga0326724_0451760	Not Available	669	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.13%
Host-Associated	Host-Associated	1.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.37%
Aquatic	Environmental → Aquatic	17.76%
Plants	Host-Associated → Plants	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.36%
Freshwater	Environmental → Aquatic → Freshwater	17.76%
Peat	Environmental → Terrestrial → Peat	14.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.66%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.02%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.08%
Loam	Environmental → Terrestrial → Soil → Loam	5.61%
Lake	Environmental → Aquatic → Freshwater → Lake	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.02%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.15%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	12.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.61%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.41%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	7.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.61%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.67%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.74%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.87%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.87%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.87%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.93%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilL2_103175692	3300003319	Sugarcane Root And Bulk Soil	VKRSGAYKQTIPVPGSSELSKELAATAAETELSQADVIRQSLKLGLPALRSRLGKRPRRRLSLQEHFKGLKGLELPPYLD*
Ga0066683_104421252	3300005172	Soil	MKSKSGAHSAHACNSSLWYYDFSVKRSKTIPVPSSPSLAKDLAATAAETGLSQADVIRQSLKLGMPALRDRLGKRPRRRLSLVSHFKGLKGLELPPYLT*
Ga0066686_100806834	3300005446	Soil	VKRSNGRSQTIPVPGSADLSRDLKATAAETELSQADVIRQALKLGLPALRARLGPKPRRRKTLRQHFAGLKGLELPPYLE*
Ga0066686_105084972	3300005446	Soil	MKSKSGAHSAHACNSSLWYYDFSVKRSKTIPVPSSPSLAKDLAATAAETGLSQADVIRQSLKLGMPALRDRLGKRPRRRLSLVSHFKGLKGLELPPYLD*
Ga0066704_106827832	3300005557	Soil	VKRSKTIPVPSSPSLAKDLAATAAETGLSQADVIRQSLKLGMPALRDRLGKRPRRRLSLVSHFKGLKGLELPPYLD*
Ga0066699_101666922	3300005561	Soil	VKRSTTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGMPALRARLGKRPRRRLSLVEHFKRLKGLELPPYLD*
Ga0070761_102548953	3300005591	Soil	SASRTNAKVTDAKTGRSKSDVTQQALKLGLFKLDTRLAKRPRRRLSLVEHFKRMKGLELPPYLDE*
Ga0070761_103645562	3300005591	Soil	VKHNATIPVPSSLDLARELAATAAETELSQADVIRQSLKLGVPALRARLGKKPRRRLTLSEHFKRLKGIELPHYLEE*
Ga0070761_108975182	3300005591	Soil	VKHTSTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGLPVLRARLGKSPQRRLSLVKHFKRMKGLELPPYLAE*
Ga0070764_107914772	3300005712	Soil	LQSCQTLLHFSVKRASTTPVVISQSLANDLGSTAVATELSLMDVIRKSLALGLPVLRARLGKRPQRRLSLVEHFKRMKGLELPTYLDE*
Ga0075522_102081991	3300006638	Arctic Peat Soil	VKRSNTIPVPGSPALAHDLAATAAETELSQADVIRQSLKLGIPALRARLGKKPQRRLSLVEHFKRLKGLELPPYLNE*
Ga0066710_1003731154	3300009012	Grasslands Soil	VKRSKTISVPSSLGLAQDLAATAAETGLSQADVIRQSLKLGMPALRDRLGKRPRRRLSLVRHFKGLKGLELPPYLD
Ga0066710_1004559943	3300009012	Grasslands Soil	MKSKSGAQSTHACNSSLWYYDFSVKRSKTIPVPSSPSLAKDLAATAAETGLSQADVIRQSLKLGMPALRDRLGKRPRRRLSLVSHFKGLKGLELPPYLD
Ga0066710_1009609291	3300009012	Grasslands Soil	VKHSSTIPVPGSPALVQDLAATAAETELSQADVIRQSLKLGMPALRARLGKRPRRRLPLWEHFRRLKGLQLPPWLD
Ga0066710_1013588982	3300009012	Grasslands Soil	VKRSTTIPVPSSSALAHDIAATAAETELSQADVIRQSLKLGMPALRARLGKRPRRRLSLVDHFKRLKGLELPPYLD
Ga0066710_1020108502	3300009012	Grasslands Soil	VKRFNTIPVPSSPALAREIAATAAETDLSQADVIRQALKLGVPALRARLGKPPRRRLPLWEHFRRLKGLKLPPWLEEE
Ga0066710_1041942501	3300009012	Grasslands Soil	SVKRSKTIPVPSSPGLAADLAATATETGLSQADVIRQSLKLGIPALRSRLGKAPRRRLSLVEHFKGLKGLELPPYLE
Ga0066709_1007077112	3300009137	Grasslands Soil	MKSKSGAQSTHACNSSLWYYDFSVKRSKTIPVPSSPSLAKDLAATAAETGLSQADVIRQSLKLGMPALRDRLGKRPRRRLSLVSHFKGLKGLELPPYLD*
Ga0066709_1030774621	3300009137	Grasslands Soil	MLQRYHDFSVKRSTTIWVPSSPELTEDLAATAAETGLSQADVIRQSLKLGIPALKERLGLGPRRRRSLVEHFKGLKGLELPPYLEQ*
Ga0114951_100396573	3300009502	Freshwater	VKRFSTIPVPGSPALAKDLAATAVETDLSQADVIRQSLKLGLPALRARLGNRPLRRLSLVEHFKRLKGLELPPYLDE*
Ga0116136_11229462	3300009547	Peatland	SRDLAATAAETGLSQADLIRQSLKLGIPALRSRLGRPARRRLSLVDHLKRFKGIELPPYLEE*
Ga0116114_10202693	3300009630	Peatland	VKRATTIPVPASPALAQDLAATALETELSQADVIRQSLKLGMPALRARLGRRPRRRLSLVDHFKRVKGLELPACLDE*
Ga0134080_102051951	3300010333	Grasslands Soil	AATAAETELSQADVIRQSLKLGMPALRARLGKRPRRRLPLWEHFRRLKGLQLPPWLD*
Ga0136847_108602451	3300010391	Freshwater Sediment	VKRSNAHENATIPVPSSAALQRELKDTAAETELKESDVIRQSLKLGLPELRARLGRRPRRRLSLPAHFKRLAGLELPPYLD*
Ga0126383_111327422	3300010398	Tropical Forest Soil	YDFSVKRSKTIPVPSSLALAEDLAATAEETGLSQADVIRQSLKLGIPALRTRLGKRPCRRRSLVQHFKALKGLELPPYLD*
Ga0150983_155808832	3300011120	Forest Soil	GSPALARDLAATAAEIELSQADVIRQSLKLGMPALRARLGKKPRRRLSLAQHFKRLKGLELPPYLNE*
Ga0137363_101719433	3300012202	Vadose Zone Soil	CACVGYDSSVKHSKTIPVPGSAALAEDLAATAAETGLSQADVIRQSLKLGMPVLRERLGTKPRRRLPLWEHFKRLKGLELPPWLD*
Ga0137399_102775814	3300012203	Vadose Zone Soil	MGYDSSVKRSKAIPVPGSAALAEDLAATAADTGLSQADVIRQSLKLGMPVLRERLGTKPRRRLPLWEHFKRLKGLELPPWLD*
Ga0137399_108349021	3300012203	Vadose Zone Soil	GFRIYVYSMKRSKIIRVPSSPNLAQDLAATAADTGLSQADVIRQSLKLGMPALRNRLRTRPRRRLPLWEHFKGLKGLKLPPWLD*
Ga0137362_117566042	3300012205	Vadose Zone Soil	VIRKTKNPKLTTIPVPGSPALSEDLATTAAETGLSQADVIRQSLKLGLHPLRSRLRQRPQHRFPPGEHFKRL
Ga0137381_110235881	3300012207	Vadose Zone Soil	MKSKSGAHSAHACNSNLWYYDFSVKRSKTIPVPSSPSLAKDLAATAAETGLSQADVIRQSLKLGMPALRDRLGKRPRRRLSLVSHFKGLKGLELPPYLD*
Ga0137381_114055292	3300012207	Vadose Zone Soil	VKRSYSSSKTIPVPSSPSLAKDLVATAEETELSQADVIRQSLKLGMPVLRARLGKRPRRRLSLVEHFKRLKGIELPPYLD*
Ga0137378_107288681	3300012210	Vadose Zone Soil	KSPKLTTIPVPGSPALSQDLAATAAETGLSQADVIRQSLKLGLPQLRARLRQRPQHRLPLGEHFKRLKGLPLPPWLE*
Ga0137378_107476542	3300012210	Vadose Zone Soil	VKRSYSNSKTIPVPSSPSLAKDLVATAEETELSQADVIRQSLKLGMPVLRARLGKRPRRRLSLVEHFKRLKGLELPPYLD*
Ga0137378_111391211	3300012210	Vadose Zone Soil	VIRKTKNPKLTTIPVPGSPALSEDLAATAAETGLSQADVIRQSLKLGLPQLRARLRQRPQHRLPLGEHFKRLKGLKLPPWLE*
Ga0137377_106696511	3300012211	Vadose Zone Soil	VKRKTKSPKLTTIPVPGSPALSEDLAATAAETGLSQADVIRQSLKLGLPQLRARLRQRPQHRLPLGEHFKRLKGLPLPPWLE*
Ga0137371_111947692	3300012356	Vadose Zone Soil	VKRTTTTIPVPGSPALRQELQATVKNTKLSQNNVIHQSLKLNMPKLRRRLNKRPRRRLPLPEHFK
Ga0137361_107063302	3300012362	Vadose Zone Soil	VKKNNKRGKDKVIPVPASAELSQDLVDTASVTGLSQADVIRQSIKLGIPRLRASLGKPRRHRLPLFEHFKRLKGLELPPYLDDAR*
Ga0150984_1198958882	3300012469	Avena Fatua Rhizosphere	LNPTGWRLSGLLAAVAIISSVGYDSSVKRSKTIPVPSSPGLAHDLAATAADTGLSQADVIRQSLKLGMPVLRDRLRTKPRRRLPLWQHFKGLKGLQLPPWLD*
Ga0137398_100267853	3300012683	Vadose Zone Soil	VKRSKTISVPSSPGLAEDLAATAAETGLSQADVIRQSLKLGIPSLRFRLGKGPRRRLSLVEHFKGLKGLELPSYLD*
Ga0137394_106297073	3300012922	Vadose Zone Soil	VPGSPALAKDIASTALETDLSQADVIRQSIKLGMPALRARLGKTPQRRLSLVEHFKRLKGLELPPYLD*
Ga0137359_103715422	3300012923	Vadose Zone Soil	VKRSTTIPVPSSPSLVQDIAATAAETELSQADVIRQSLKLGMPALRARLGKRPRRRLSLVEHFKRLKGLELPPYLD*
Ga0137359_111965741	3300012923	Vadose Zone Soil	KTIPVPGSAALAEDLAATAAETGLSQADVIRQSLKLGMPVLRERLGTKPRRRLPLWEHFKRLKGLELPPWLD*
Ga0137410_111537762	3300012944	Vadose Zone Soil	VGYDSSVKHSKTIPVPGSAALAEDLAATAAETGLSQADVIRQSLKLGMPVLRERLGTKPRRRLPLWEHFKRLKGLELPPWLD*
Ga0157374_107095761	3300013296	Miscanthus Rhizosphere	VKRNVTIPVPGSPELAEELAAAAAETGMSQADVIRQSLKLGIPALKGRLGPRPRRRRSLNDHFKGLKGLELPPYLEP*
Ga0181539_10313322	3300014151	Bog	VKRSHSHTTIPVPGSPKLSQDLAATAAETGLSQADVIRQSLKLGIPALRSRLGKPPRRRLSLVDHLKRFKGIELPPYLEG*
Ga0181539_11659772	3300014151	Bog	VKRSSTIPVPGFPALAQDLAATAAGTKISQPDVIRQSLKLGMPALRARLGKSPRRRLSLVEHFKRLKGLELPPYLNE*
Ga0181524_100389263	3300014155	Bog	VKRATTIPVPASPALAQDLAATALETELSQADVIRQSLKLGMPALRARLGRRPRRRLSLVAHFKRLKGLELPACLDE*
Ga0181530_102006242	3300014159	Bog	VPGSRNLAKDLAATAAETELSQADVIRQSLKLGIPALRARLGKRPGRRLPLGEHFKRLKGLELPPYLDE*
Ga0181530_103353273	3300014159	Bog	QDLAATALETELSQADVIRQSLKLGMPALRARLGRRPRRRLSLVAHFKRLKGLELPACLDE*
Ga0181538_106392971	3300014162	Bog	MPACNAGRACYDFSVKRATTIPVPASPALAQDLAATALETELSQADVIRQSLKLGMPALRARLGRRPRRRLSLVAHFKRLKGLELPACLD
Ga0182014_106277542	3300014491	Bog	AILTEHHYDFSVKRSNTIPVPGTPALARDLATTAVETELSQADVIRQSLKLGLPSLRARLGRSPQRRLSLVKHFKRLKGLELPPYLDE*
Ga0182016_100026893	3300014493	Bog	VKHTTTIPVPGSVDLARALAATAAETDLSQADVIRQSLKLGIPALRARLGKKPRRRLSLQEHFKRLKGLELPPYLNE*
Ga0182017_106271792	3300014494	Fen	VKRSNTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGLPTLRARLGKRPQRRLSLVEHFKRLKGLELPPYLDE*
Ga0182015_104677602	3300014495	Palsa	YDFSVKRSHTIPVPGSPALARELAATAAEIELSQADVIRQSLKLGLPALRARLGKGPRRRLSLVQHFKRLKGLELPPYLDE*
Ga0182015_106180132	3300014495	Palsa	VPGSPALAQDLAATAAETELSQADVIRQSLKLGIPALRARLGKSPRRRLSLVEHFKRMKGLELPPYLDE*
Ga0182019_107873372	3300014498	Fen	MKRTKNVPVPGSPALAQDIAATAAETELSQVDVIRQSLKLGLPPSRTRLGKAPHRRLSLAQHFKRLKGLELPPYLDE*
Ga0182019_113369462	3300014498	Fen	QADVIRQSLKLGLPTLRARLGKAPQRRLTLVQHFKRLKGLELPPYLDE*
Ga0182024_1001026516	3300014501	Permafrost	VKRSNTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGIPALRARLGKRPRRRLSLVEHFKRLKGLALPPYLDE*
Ga0182024_101418423	3300014501	Permafrost	MSACNEARLSYDFSVKHSSTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGLPVLRARLGKRPQRRLSLVEHFKRMKGLELPPYLDE*
Ga0182024_112310263	3300014501	Permafrost	VKHTHTIPVPGSRNLARDLAATAAETELSQADVIRQSLKLGIPALRARLGKKPRRRLPLAEHFKRLKGLELPPYLDE*
Ga0182030_108360572	3300014838	Bog	VKRSNTISVPGFPALARELATTAAETELSQADVIRQSLKLGMPALRARLGKSPGRRLSLVEHFKRLKGLELPPYLDE*
Ga0182027_101158883	3300014839	Fen	VKRSCTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGLPTLRARLGKRPQRRLSLVEHFKRLKGLELPPYLDE*
Ga0182027_106526981	3300014839	Fen	MRVSTIPVPGSPALARDLAATAAETELSQADVIRQSLKLGLPTLRARLGKSPQRRLSLVEHFKRLK
Ga0134085_103849202	3300015359	Grasslands Soil	VKRSSTIPVPSSPALAEDIAATAAETELSQADVIRQSLKLGMPVLRARLGKGPRRHLSLVEHFKRLKGLELPPYLD*
Ga0187856_10659162	3300017925	Peatland	VKRSNSHTNIPVRGSPELSRDLAATAAETGLSQADLIRQSLKLGIPALRSRLGRPARRRLSLVDHLKRFKGIELPPYLEE
Ga0187876_10477542	3300018003	Peatland	LAATAAETGLSQADLIRQSLKLGIPALRSRLGRPARRRLSLVDHLKRFKGIELPPYLEE
Ga0187872_100377102	3300018017	Peatland	VKRATTIPVPASPALAQDLAATALETELSQADVIRQSLKLGMPALRARLGRRPRRRLSLVAHFKRLKGLELPACLDE
Ga0187867_107800502	3300018033	Peatland	VRYDFSVKRSNTIPVPGSPALAEDLAATAAETELSQADVIRQSLKLGLPTLRARLGKRPKRRLSLVEHFKRLKGLELPPYLDA
Ga0187887_107053052	3300018043	Peatland	VKHFSTIPVPGSPALAKDLAATAAETELSQADVLRQSLKLGLPALRARLGKRPQRRLALVDHFKRMKGLELPPYLNE
Ga0187858_104464991	3300018057	Peatland	MPACNAGRVRYGSSVNRSNTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGLPALRARLGKGPRRRLSLVQHFKRLKGLEMPPYLDE
Ga0187852_12560461	3300019082	Peatland	VKRSNTISVPGFPALARELATTAAETELSQADVIRQSLKLGMPALRARLGKSPGRRLSLVEHFKRLKGLELPPY
Ga0187800_16328251	3300019278	Peatland	TALISELKAAAADTEMTQADVIRQALKLGIPALRSRLGKPPRRRLAMVDHFARLKGLQLPPYLD
Ga0193692_10035335	3300020000	Soil	LAAAAAETGLSQADVIRQSLKLGIPVLKGRLGPRPRRRRSLADHFKGLKGLELPPYLEP
Ga0193696_10483531	3300020016	Soil	VKRKVTIPVPSSPQLAQELAAAAAETGLSQADVIRQSLKLGIPVLKGRLGPRPRRRRSLADHFKGLKGLELPPYLEP
Ga0210399_101492041	3300020581	Soil	MLFSYDSSVKRSNTIPVPGTRELAHDLAATAVETDLSRADVIRQSLKLGIPALRARLGKRPRRRLSLVEHFKRLKGLELRPYLDE
Ga0210395_101442271	3300020582	Soil	MSTRNEARFGYDFSVKHSSTISVPSSPALAQALAATAAETELSQADVIRQSLKLGLPVFRARLDKRPQRRLSLVEHFKRMKRLELPPYLDE
Ga0210406_105688752	3300021168	Soil	VKRSKTIPVPSSPDLAQDLAATAADTGLSQADVIRQSLKLGMPALRDRLRARPRRRLPLWEHFKGLKGLQ
Ga0210405_100228526	3300021171	Soil	MLFSYDSSVKRSNTIPVPGTRELAHDLAATAVETDLSQADVIRQSLKLGIPALRAGLGKRLRRRLSLVEHFRRLKGLELRPYLDE
Ga0210388_108455441	3300021181	Soil	LQSCQTLLHFSVKRASTIPVVISQSLANDLGSTAVATELSLMDVIRKSLALGLPVLRARLGKRPQRRLSLVEHFKRMKGLELPTYLDE
Ga0212088_101289222	3300022555	Freshwater Lake Hypolimnion	VKRFSTIPVPGSPALAKDLAATAVETDLSQADVIRQSLKLGLPALRARLGNRPLRRLSLVEHFKRLKGLELPPYLDE
Ga0224557_11375582	3300023101	Soil	VKRSITIPVPGSPTLARDLAATASETELSQADVIRQSLKLGMPSLRARLGKRPQRRLSLVEHFKRLKGLELPPYLDE
Ga0247666_11190281	3300024323	Soil	VIRKTKNPKLTTIPVPGSPALSEDLAATAAETGLSQADVIRQSLKLGLPQLRARLRQRPQHRLPLGEHFKRLKGLKLPPWLE
Ga0209483_11067281	3300025862	Arctic Peat Soil	VRSCNAVRISYDFSVKRSNTIPVPGSPALAHDLAATAAETELSQADVIRQSLKLGIPALRARLGKKPQRRLSLVEHFKRLKGLELPPYLNE
Ga0209131_11242313	3300026320	Grasslands Soil	VYYDFSVKRSKTIPVPSSVELAEDLAATAAETGLSQADVIRQSLKLGIPALKGRLGLGPRRRRSLIEHFKGLKGLELPPYLEP
Ga0209157_13539062	3300026537	Soil	LRRDLKATAAETELSQADVIRQALKLGLPALRARLGPKPRRRKTLRQHFAGLKGLELPPYLE
Ga0209274_105246761	3300027853	Soil	NPGELSYDFSVKHTSTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGLPVLRARLGKSPQRRLSLVKHFKRMKGLELPPYLAE
Ga0209488_100691472	3300027903	Vadose Zone Soil	VKRSTTIPVPGSLALAQDLAATAAETELSQADVIRQSLKLGIPALRARLGKRPRRRLSLVEHFKRLKGLELPPYLD
Ga0137415_112127491	3300028536	Vadose Zone Soil	VCAACNAREITYTFSVKRFNPHPTIPVPGSRELAKELSAIAAETGLSQADVIRQSLKLGMPALRARLGKRLRHRLSLGEHFKGLKGLELRPNLD
Ga0302222_100521661	3300028798	Palsa	GGRASYDFSVKRSNTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGIPALRARLGKSPRRRLSLVEHFKRMKGLELPPYLDAV
Ga0311353_100079352	3300030399	Palsa	LAQGYSAQVRVVDTRISPCNGGRASYDFSVKRSNTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGIPALRARLGKSPRRRLSLVEHFKRMKGLELPPYLDAV
Ga0310038_103461611	3300030707	Peatlands Soil	ARDIVATAAETELSQADVIRQSLKLGMPALRARLGKRPRRHLSLVEHFRRLRGLELPPYL
Ga0302325_110390772	3300031234	Palsa	MSARKGGTGSYDFSVKRFSTIPVPGSAALVQDLAATAAETELSQADVIRQSLKLGLPTLRERLGKRPRRRLTLVQHFKKLKGLELPPYLDE
Ga0302325_120158532	3300031234	Palsa	VPGSPALAQDLAATAAETELSQADVIRQSLKLGLPALRARLGKRPQRRLSLVEHFKRMKGLELPPYLNE
Ga0302326_110174043	3300031525	Palsa	TDDARRSACNAGRLSYDFSVKHFSTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGLPALRARLGKRPQRRLSLVEHFKRMKGLELPPYLNE
Ga0310686_1021756945	3300031708	Soil	LSYDFSVKLYNAIPVHGSPALAQDLAATAAETDLSQADVIRQSLKLGIPALRARLGKRPRRRLSLVEHFKRLKGLELPPYLDE
Ga0310686_1083974718	3300031708	Soil	MVSWLSACVVDTKTSACNGGRISYGFSVKRSNTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGIPALRARLGKRPRRRLSLVEHFKRMKGLELPPYLDE
Ga0302319_111913422	3300031788	Bog	VKHTNTIPVPGSRDLARDLAATAAETELSQADVIRQSLKLGMPALRARLGKKPRRRLPLAEHFKRLKGLELPSYLDR
Ga0315271_107180892	3300032256	Sediment	LTELSQADVIRQSLKLGMAQLRARLGHPPARRQTLAQHFKPFARLKLPPYLE
Ga0326728_1000274644	3300033402	Peat Soil	MPACNAGRVRYDASVHRSSTIPVPGSPALAQNLAATAAETELSQANVIRQSLKLGLPALRARLGKGPRRRLSLVQHFKRLKGLELPPYLDE
Ga0326728_100148223	3300033402	Peat Soil	MSACNPGGVSYGFSVKRTNTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGLPALRARLGKRPRRRLSLVEHFKRLKGLELPPYLDE
Ga0326728_100359418	3300033402	Peat Soil	MSACNSSKVSYVFSVKRSNTIPVPGSPALAQDLAATAAETELSQADVIRQSLKLGMPALRSRLGKRPRRRLSLVEHFKRLKGLELPPYLDE
Ga0326728_107986941	3300033402	Peat Soil	RDKYCNRITLRLQSQSGELVFSVKRSNTIPVPGSPALAQDLVATAAETELSQADVIRQSLKLGMPALRARLGKRPRRRLSLVEHFKRLKGLELPP
Ga0326727_10000520126	3300033405	Peat Soil	VPGSPALAQDLAATAAETELSQADVIRQSLKLGLPALRARLGKRPRRRLSLVQHFKRLKGLELPPYLDK
Ga0371488_0339477_2_190	3300033983	Peat Soil	AQDLAATAAETELSQADVIRQSLKLGLPALRARLGKRPRRRLSLVEHFKRLKGLELPPYLDE
Ga0326724_0096005_934_1209	3300034091	Peat Soil	MSACNPGGVSYGFSVKRTNTIPVPGSPALAQDLAATAAETELSQADVIRQSLELGLPALRARLGKRPRRRLSLVEHFKRLKGLELPPYLDE
Ga0326724_0451760_499_669	3300034091	Peat Soil	TAAETELSQADVIRQSLKLGVPALRARLGKSPRRRLSLPEHFKRLKGLELPPYLDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091948

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences