Metagenome Family F091912

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091912
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	56 residues
Representative Sequence	SDYINQHARQDAQKLGGAYGIKEGVEILPVSRTTDAVDVKALPARDPLTGEDDSL
Number of Associated Samples	89
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.91 %
% of genes near scaffold ends (potentially truncated)	91.59 %
% of genes from short scaffolds (< 2000 bps)	83.18 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (49.533 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (14.019 % of family members)
Environment Ontology (ENVO)	Unclassified (30.841 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (35.514 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.46% β-sheet: 2.41% Coil/Unstructured: 83.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13392	HNH_3	10.28
PF13411	MerR_1	3.74
PF13412	HTH_24	1.87
PF00436	SSB	0.93
PF02778	tRNA_int_endo_N	0.93
PF11735	CAP59_mtransfer	0.93
PF16363	GDP_Man_Dehyd	0.93
PF13640	2OG-FeII_Oxy_3	0.93
PF13542	HTH_Tnp_ISL3	0.93
PF02796	HTH_7	0.93
PF00210	Ferritin	0.93
PF13578	Methyltransf_24	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.93
COG1676	tRNA splicing endonuclease subunit SEN34	Translation, ribosomal structure and biogenesis [J]	0.93
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.47 %
Unclassified	root	N/A	49.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
cellular organisms	root	All Organisms → cellular organisms	41.12 %
Viruses	superkingdom	All Organisms → Viruses	9.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.12 %
unclassified bacterial viruses	clade	All Organisms → Viruses → unclassified bacterial viruses	5.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	33.64 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	5.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	33.64 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	5.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	33.64 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	5.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	33.64 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	5.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	33.64 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	5.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	33.64 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	5.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.53 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	33.64 %
Synechococcus phage S-EIVl	species	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	5.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001934\|GOS2267_102189	Not Available	1903	Open in IMG/M
3300002835\|B570J40625_100997064	Not Available	716	Open in IMG/M
3300004461\|Ga0066223_1043076	All Organisms → Viruses → Predicted Viral	1643	Open in IMG/M
3300005346\|Ga0074242_10442420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1565	Open in IMG/M
3300005527\|Ga0068876_10591989	Not Available	601	Open in IMG/M
3300005528\|Ga0068872_10134492	Not Available	1452	Open in IMG/M
3300005582\|Ga0049080_10052107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1414	Open in IMG/M
3300005955\|Ga0073922_1039099	Not Available	593	Open in IMG/M
3300006641\|Ga0075471_10229609	Not Available	959	Open in IMG/M
3300006734\|Ga0098073_1015234	Not Available	1215	Open in IMG/M
3300006802\|Ga0070749_10588955	Not Available	600	Open in IMG/M
3300007216\|Ga0103961_1073576	Not Available	1631	Open in IMG/M
3300007216\|Ga0103961_1176178	Not Available	7581	Open in IMG/M
3300007344\|Ga0070745_1131339	Not Available	960	Open in IMG/M
3300007538\|Ga0099851_1351747	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	514	Open in IMG/M
3300007541\|Ga0099848_1072366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1354	Open in IMG/M
3300007960\|Ga0099850_1203652	Not Available	778	Open in IMG/M
3300008107\|Ga0114340_1009574	Not Available	6230	Open in IMG/M
3300008107\|Ga0114340_1238119	Not Available	567	Open in IMG/M
3300008114\|Ga0114347_1274630	Not Available	500	Open in IMG/M
3300008120\|Ga0114355_1015276	All Organisms → cellular organisms → Bacteria	5739	Open in IMG/M
3300008448\|Ga0114876_1125474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	977	Open in IMG/M
3300008448\|Ga0114876_1193902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	693	Open in IMG/M
3300008448\|Ga0114876_1194022	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	693	Open in IMG/M
3300008448\|Ga0114876_1223362	Not Available	612	Open in IMG/M
3300009075\|Ga0105090_10541044	All Organisms → cellular organisms → Bacteria → Proteobacteria	708	Open in IMG/M
3300009170\|Ga0105096_10036524	All Organisms → cellular organisms → Bacteria	2413	Open in IMG/M
3300009451\|Ga0127402_1042610	All Organisms → Viruses → Predicted Viral	1007	Open in IMG/M
3300009484\|Ga0127411_1217440	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	514	Open in IMG/M
3300010296\|Ga0129348_1224283	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	636	Open in IMG/M
3300010296\|Ga0129348_1290059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	547	Open in IMG/M
3300010297\|Ga0129345_1127135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	931	Open in IMG/M
3300010297\|Ga0129345_1187602	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	737	Open in IMG/M
3300010299\|Ga0129342_1329677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	522	Open in IMG/M
3300010318\|Ga0136656_1270952	Not Available	556	Open in IMG/M
3300010354\|Ga0129333_10046507	Not Available	4075	Open in IMG/M
3300010354\|Ga0129333_10127157	Not Available	2345	Open in IMG/M
3300010354\|Ga0129333_11747124	Not Available	505	Open in IMG/M
3300010370\|Ga0129336_10713967	Not Available	530	Open in IMG/M
3300014042\|Ga0117790_1052683	Not Available	700	Open in IMG/M
3300014050\|Ga0119952_1075287	Not Available	838	Open in IMG/M
3300017701\|Ga0181364_1009169	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1676	Open in IMG/M
3300017716\|Ga0181350_1020809	Not Available	1838	Open in IMG/M
3300017747\|Ga0181352_1038661	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1417	Open in IMG/M
3300017754\|Ga0181344_1133833	Not Available	711	Open in IMG/M
3300017780\|Ga0181346_1238659	Not Available	640	Open in IMG/M
3300017784\|Ga0181348_1327238	Not Available	506	Open in IMG/M
3300017785\|Ga0181355_1107204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1152	Open in IMG/M
3300017785\|Ga0181355_1278890	Not Available	634	Open in IMG/M
3300017962\|Ga0181581_10441257	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	812	Open in IMG/M
3300018421\|Ga0181592_10520966	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	818	Open in IMG/M
3300019724\|Ga0194003_1009396	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	943	Open in IMG/M
3300019756\|Ga0194023_1127567	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	519	Open in IMG/M
3300019784\|Ga0181359_1103205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1042	Open in IMG/M
3300020074\|Ga0194113_10632615	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	751	Open in IMG/M
3300020161\|Ga0211726_10823136	Not Available	628	Open in IMG/M
3300020204\|Ga0194116_10008211	Not Available	10635	Open in IMG/M
3300020533\|Ga0208364_1046869	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	567	Open in IMG/M
3300021373\|Ga0213865_10209145	Not Available	960	Open in IMG/M
3300021961\|Ga0222714_10003397	Not Available	16254	Open in IMG/M
3300021963\|Ga0222712_10402524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	831	Open in IMG/M
3300021964\|Ga0222719_10743819	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	547	Open in IMG/M
3300022063\|Ga0212029_1014029	All Organisms → Viruses → Predicted Viral	1022	Open in IMG/M
3300022173\|Ga0181337_1057002	Not Available	505	Open in IMG/M
3300022407\|Ga0181351_1168972	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	766	Open in IMG/M
3300023116\|Ga0255751_10217652	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1055	Open in IMG/M
3300023172\|Ga0255766_10549746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	521	Open in IMG/M
3300023176\|Ga0255772_10227080	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1039	Open in IMG/M
3300025093\|Ga0208794_1012029	Not Available	2057	Open in IMG/M
3300025445\|Ga0208424_1029519	Not Available	657	Open in IMG/M
3300025646\|Ga0208161_1055886	Not Available	1238	Open in IMG/M
3300025646\|Ga0208161_1085881	All Organisms → cellular organisms → Bacteria → Proteobacteria	899	Open in IMG/M
3300025671\|Ga0208898_1030253	Not Available	2221	Open in IMG/M
3300025674\|Ga0208162_1076760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1043	Open in IMG/M
3300025769\|Ga0208767_1157214	Not Available	819	Open in IMG/M
3300027114\|Ga0208009_1054347	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	739	Open in IMG/M
3300027693\|Ga0209704_1117873	All Organisms → cellular organisms → Bacteria → Proteobacteria	761	Open in IMG/M
3300027762\|Ga0209288_10143161	All Organisms → cellular organisms → Bacteria → Proteobacteria	767	Open in IMG/M
3300027782\|Ga0209500_10090522	Not Available	1533	Open in IMG/M
3300027785\|Ga0209246_10253094	Not Available	682	Open in IMG/M
3300027793\|Ga0209972_10206466	Not Available	907	Open in IMG/M
3300027917\|Ga0209536_100216105	Not Available	2406	Open in IMG/M
3300027917\|Ga0209536_101102582	Not Available	976	Open in IMG/M
3300027917\|Ga0209536_102730455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	577	Open in IMG/M
3300027963\|Ga0209400_1020220	All Organisms → Viruses → Predicted Viral	3936	Open in IMG/M
3300029930\|Ga0119944_1022624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	847	Open in IMG/M
3300029933\|Ga0119945_1016117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	923	Open in IMG/M
3300031566\|Ga0307378_10628587	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	936	Open in IMG/M
3300031578\|Ga0307376_10922554	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	531	Open in IMG/M
3300031673\|Ga0307377_10297614	Not Available	1223	Open in IMG/M
3300031857\|Ga0315909_10004789	Not Available	15799	Open in IMG/M
3300031857\|Ga0315909_10439908	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	920	Open in IMG/M
3300031857\|Ga0315909_10573001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	761	Open in IMG/M
3300031857\|Ga0315909_10702830	Not Available	656	Open in IMG/M
3300032116\|Ga0315903_10552908	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	895	Open in IMG/M
3300032156\|Ga0315295_11646663	All Organisms → Viruses → unclassified bacterial viruses → Synechococcus phage S-EIVl	614	Open in IMG/M
3300033557\|Ga0316617_100176965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1662	Open in IMG/M
3300033816\|Ga0334980_0148762	Not Available	959	Open in IMG/M
3300033978\|Ga0334977_0573508	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	507	Open in IMG/M
3300034021\|Ga0335004_0532624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	636	Open in IMG/M
3300034062\|Ga0334995_0775178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	529	Open in IMG/M
3300034073\|Ga0310130_0012021	Not Available	2976	Open in IMG/M
3300034073\|Ga0310130_0074825	Not Available	1008	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	91.59%
Terrestrial	Environmental → Terrestrial	7.48%
Fish	Host-Associated → Fish	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	51.40%
Marine	Environmental → Aquatic → Marine	38.32%
Soil	Environmental → Terrestrial → Soil	4.67%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.80%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.93%
Unclassified	Environmental → Aquatic → Unclassified	0.93%
Skin	Host-Associated → Fish → Skin	0.93%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	25.23%
Lake	Environmental → Aquatic → Freshwater → Lake	20.56%
Lentic	Environmental → Aquatic → Freshwater → Lentic	16.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.61%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.61%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.67%
Oceanic	Environmental → Aquatic → Marine → Oceanic	4.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.80%
Clay	Environmental → Terrestrial → Soil → Clay	2.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.80%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	1.87%
River	Environmental → Aquatic → Freshwater → River	0.93%
Pond	Environmental → Aquatic → Freshwater → Pond	0.93%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.93%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Epidermal Mucus	Host-Associated → Fish → Skin → Epidermal Mucus	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	25.23%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	19.63%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	14.95%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.67%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	4.67%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	2.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.80%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.93%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.93%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.93%
Unclassified	Host-Associated → Fish → Skin → Epidermal Mucus → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	14.02%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	13.08%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	10.28%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.67%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.67%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	4.67%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.74%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.74%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.80%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	2.80%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.80%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.80%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.87%
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	1.87%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.87%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.93%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.93%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.93%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.93%
Meromictic Pond	Environmental → Aquatic → Freshwater → Pond → Unclassified → Meromictic Pond	0.93%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.93%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.93%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.93%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.93%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.93%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.93%
Epidermal Mucus	Host-Associated → Fish → Skin → Epidermal Mucus → Unclassified → Epidermal Mucus	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001934	Estuary microbial communities from Chesapeake Bay, Maryland, USA - MOVE858	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300005346	Saline sediment microbial community from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005955	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T2_23-Sept-14	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006734	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300007216	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface and Bottom layer) 16 sequencing projects	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008114	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009451	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 8m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009484	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 12m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300014042	Epidermal mucus viral and microbial communities from European eel in Spain - Ebro delta (0.22 um filter)	Host-Associated	Open in IMG/M
3300014050	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007B	Environmental	Open in IMG/M
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019724	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_9-10_MG	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020204	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surface	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020533	Freshwater microbial communities from Lake Mendota, WI - 08JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022063	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022173	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM15.D.D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300025093	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025445	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300027114	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027762	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300029930	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727	Environmental	Open in IMG/M
3300029933	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727_2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2267_1021896	3300001934	Marine	DDYINQHSRQDAEKLGGSYGIKEGVAIMPVSRTVESVDVKALPQRDSATGEDASLL*
B570J40625_1009970641	3300002835	Freshwater	SDYINQHARQDAEKLGGAYGIKDGVEILPVSRTTDVEVKALPARDAVTGEDADLF*
Ga0066223_10430764	3300004461	Marine	DAAKLGGAYGIREGVEILPELRNTKEVDVTALPSARDPITGEDDSLI*
Ga0074242_104424203	3300005346	Saline Water And Sediment	TWKFQEMYDDYINQHSRQDAEKLGGSYGIKEGVAIMPVSRTVESVDVKALPQRDSATGEDVSLF*
Ga0068876_105919893	3300005527	Freshwater Lake	MFDDYINQHSRQDAQRLGGAYGIKDGVQILPVSRTTDAVEVKALPARDELTGEDQSL*
Ga0068872_101344925	3300005528	Freshwater Lake	DYINIHAKQDAQKLNGSYGMKPGVQVLPVSRISDAVEVKSLPARNELTGEDEML*
Ga0049080_100521073	3300005582	Freshwater Lentic	STWKFQELFADYINQHSKQDADKLGGAYGIKEGVEILPASRGTEPLQLKSAQDPMTGEDDSLF*
Ga0073922_10390991	3300005955	Sand	PDEDRASTWKYQEMFNDYINIHAKQDAEKLGGAYGIKSGVQILPANRSESVEVKALPARDETTGEDFAL*
Ga0075471_102296091	3300006641	Aqueous	TWKYQEMFNDYINIHAKQDAQKLHGAYGMKQGVQVLPVSRVSDSVEVKALPARNELTGEDETL*
Ga0098073_10152344	3300006734	Marine	DYINQHSKQDAEKLGGSYGMKDGVQILPESRVREAVDVKSLPAVDPNTGEDESMF*
Ga0070749_105889551	3300006802	Aqueous	RQDAQKLGGAYGIKEGVEILPVSRTTDAVDVKALPARDPLTGEDDSL*
Ga0070754_103543621	3300006810	Aqueous	QDAQKLNGAYGIKEGVEILPASRTTEAVDVKALPARDPLTGEDDSL*
Ga0103961_10735761	3300007216	Freshwater Lake	EMFDDYINIHAKQDAQKLNGFYGMKPGVQILPVSRNSDAVEVKSLPARNELTGEDETL*
Ga0103961_11761781	3300007216	Freshwater Lake	WKFQEMFQDYINIHAKQDADKLGGAYGIKEGVEILPVSRVTDAQVKSLPGRDPMTGEDESL*
Ga0070745_11313391	3300007344	Aqueous	DYINQHARQDAQKLGGAYGIKEGVEILPVSRATDTVDVKALPGRDPLTGEDASL*
Ga0099851_13517471	3300007538	Aqueous	SRQDAQRLGGAYGIKEGVEILPVSRTTDAVEVKALPTRDEMTGEDLSF*
Ga0099848_10723661	3300007541	Aqueous	MFDDYINQHARQDAQKLNGAYGIKEGVEILPVSRTNDAVDVKALPARDELTGEDSSL*
Ga0099850_12036521	3300007960	Aqueous	ARQDAQKLGGAYGIKEGVEILPVSRTTDAVDVKALPARDPMTGEDESL*
Ga0114340_10095744	3300008107	Freshwater, Plankton	MQELFHDYINQHAKQDADKLGGVYGIKDGVEILPASRTTDPIDVKALPSRDELTGEDASLN*
Ga0114340_12381191	3300008107	Freshwater, Plankton	YQEMFDDYINQHSRQDAQRLGGAYGIKDGVQILPVSRTTDAVEVKALPARDELTGEDQSL
Ga0114347_12746302	3300008114	Freshwater, Plankton	NQHAKQDADKLGGAYGIKDGVEILPASRTTDPIDVKALPSRDELTGEDSSL*
Ga0114355_10152767	3300008120	Freshwater, Plankton	MLTNLVVDADKLGGVYGIKDGVEILPASRTTDPIDVKALPSRDELTGEDASLN*
Ga0114876_11254744	3300008448	Freshwater Lake	YINQHSRQDAQRLNGAYGIKDGVQILPVSRTTDAVEVKALPSRNELTGEDESL*
Ga0114876_11939023	3300008448	Freshwater Lake	EMFGDYINQHARQDAEKLGGAYGIKQGVEILPVSRTTDAVDVKALPSRDPMTGEDSSL*
Ga0114876_11940221	3300008448	Freshwater Lake	EMFGDYINQHARQDAEKLGGAYGIKQGVEILPVSRTTDTVDVKALPSRDPMTGEDSSL*
Ga0114876_12233621	3300008448	Freshwater Lake	LFNDYINIHAKQDAQKLGGAYGIKDGVEILPVSRTMDTVEVKALPARDEMTGEDISLA*
Ga0105090_105410442	3300009075	Freshwater Sediment	ESTWKYQEMFDDYINQHSRQDAQRLGGAYGIKDGVQILPVSRIADAVDVKALPARNELTGEDASLL*
Ga0105096_100365241	3300009170	Freshwater Sediment	NQHSRQDAQRLGGAYGIKAGVEILPVSRIADAVDVKALPARNELTGEDASLL*
Ga0127402_10426101	3300009451	Meromictic Pond	DYINQHSKQDADKLGGAYGIKPGVQILPANRSESVDVKALPARDETTGEDFAL*
Ga0127411_12174402	3300009484	Meromictic Pond	YQEMFDDYINQHSKQDADKLGGAYGIKPGVQILPANRSESVDVKALPARDETTGEDFAL*
Ga0129348_12242833	3300010296	Freshwater To Marine Saline Gradient	FNDYINQHSRQDAEKLGGAYGIKPGVQILPANRSESVEVKALPARDETTGEDFAL*
Ga0129348_12900592	3300010296	Freshwater To Marine Saline Gradient	STWKFQEMYDDYINQHSRQDAEKLGGSYGIKEGVAIMPVSRTVESVDVKALPQRDSATGEDASLL*
Ga0129345_11271353	3300010297	Freshwater To Marine Saline Gradient	PDKDRESTWKYQEMFDDYINQHSKQDAEKLGGSYGMKDGVQILPESRVREAVDVKSLPAVDPNTGEDESMF*
Ga0129345_11876023	3300010297	Freshwater To Marine Saline Gradient	SRQDAEKLGGAYGIKEGVEIQPVSRTISEVEVKALPARDPMTGEDESL*
Ga0129342_13296771	3300010299	Freshwater To Marine Saline Gradient	HSRQDAEKLGGSYGIKEGVAIMPVSRTVESVDVKALPQQDSATGEDASLL*
Ga0136656_12709523	3300010318	Freshwater To Marine Saline Gradient	QEMFGDYINQHARQDAQKLGGAYGIKEGVEILPVSRTTDAVDVKALPARDPMTGEDSSL*
Ga0129333_100465071	3300010354	Freshwater To Marine Saline Gradient	INQHAKQDAEKLGGAYGIKQGVEILPVSRTTDAVDVKALPARDPMTGEDSSL*
Ga0129333_101271571	3300010354	Freshwater To Marine Saline Gradient	QEMFDDYINQHAKQDAEKLGGAYGIKQGVEILPVSRAVHVEVKALASAQDPDTGENYSF*
Ga0129333_117471241	3300010354	Freshwater To Marine Saline Gradient	HSRQDAQRLGGAYGIKAGVEILPVSRTTDAVDVKALPARDEMTGEDLSL*
Ga0129336_102500611	3300010370	Freshwater To Marine Saline Gradient	QDAEKLGGAYGVKAGVEILPETRGSAVDVKALPARNPITGEDDSL*
Ga0129336_107139672	3300010370	Freshwater To Marine Saline Gradient	KFQEMFSDYINQHARQDAQKLGGAYGIKEGVEILPVSRTTDAVDVKALPARDPLTGEDDSL*
Ga0117790_10526833	3300014042	Epidermal Mucus	KYQEMFDDYINQHSRQDAQRLGGAYGIKEGVQILPVSRTTDAVDVKSLPGRDELTGEDSSL*
Ga0119952_10752874	3300014050	Freshwater	HARKDAEKLGGAYGIKAGVEILPVSRTTDAVDVKALPGRDELTGEDSSLM*
Ga0181364_10091691	3300017701	Freshwater Lake	TWKFQSLFFDYINQHAKQDADKLGGAYGIKEGVEILPVSRTIETFEVKALPARNAMTGEDDSLL
Ga0181350_10208095	3300017716	Freshwater Lake	FFDYINQHAKQDADKLGGAYGIKEGVEILPVSRTVEVCEVKALPARDPMTGEDDSLL
Ga0181352_10386611	3300017747	Freshwater Lake	STWKFQELFADYINQHSKQDADKLGGAYGIKEGVEILPASRGTEPFQLKSAQDPMTGEDDSLL
Ga0181344_11338331	3300017754	Freshwater Lake	QDMFADYINQHAKQDAEKLGGAYGIKEGVEILPASRGGDVDVKLLASAQDPDTGENYSFG
Ga0181346_12386592	3300017780	Freshwater Lake	YINQHAKQDADKLGGAYGIKEGVEILPVSRTVEVCEVKALPARDPMTGEDDSLL
Ga0181348_13272381	3300017784	Freshwater Lake	DRESTWKMQGIFEDYINQHARQDAKKLGGAYGIAEGVEILPVSRSGNTVDVKVLPARNEITGEDDSL
Ga0181355_11072041	3300017785	Freshwater Lake	HAKQDAEKLGGAYGIKEGVEILPASRGSNVDVKLLASAQDPDTGENYSF
Ga0181355_12788901	3300017785	Freshwater Lake	DRESTWKYQEMFDDYINQHSRQDAQRLGGAYGIKDGVQILPVSRTTDAVEVKALPARDELTGEDQSL
Ga0181581_104412573	3300017962	Salt Marsh	DYINQHSRQDAEKLGGSYGIKEGVAIMPVSRTVESVDVKALPQRDSATGEDASLL
Ga0181592_105209663	3300018421	Salt Marsh	FQEMYDDYINQHSRQDAEKLGGSYGIKEGVAIMPVSRTVESVDVKALPQRDSATGEDASL
Ga0194003_10093962	3300019724	Sediment	MYDDYINQHSRQDAEKLGGSYGIKEGVAIMPVSRTVESVDVKALPERDSATGEDASLL
Ga0194023_11275671	3300019756	Freshwater	SRQDAKKLGGSYGIKEGVAIMPVSRTVESVDVKALPQGDSATGEDASLF
Ga0181359_11032054	3300019784	Freshwater Lake	FDYINQHAKQDADKLGGAYGIKEGVEILPVSRTIETFEVKALPARNAMTGEDDSLL
Ga0194113_106326153	3300020074	Freshwater Lake	RQDAEKLGGAYGIKEGVEILPVTRTMETEVKALPGRDAVTGEDDSLL
Ga0211726_108231363	3300020161	Freshwater	GDYINQHARQDADKLGGAYGIKDGVEILPVSRTTDAVDVKALPARDELTGEDSSLS
Ga0194116_1000821125	3300020204	Freshwater Lake	EMFDDYINQHAKQDAEKLGGAYGIKQGVEILPVSRAVDVEVKALASAQDPDTGENYSF
Ga0211731_110684721	3300020205	Freshwater	QDAEKLGGAYGIKPGVQILPANRGEAVDVKALPARDETTGEDFAL
Ga0208364_10468692	3300020533	Freshwater	NVHAKQDSDKLGGAYGIKEGVEILPVSRTMDPVDVKALPSRDELTGEDSSL
Ga0213865_102091451	3300021373	Seawater	FNDYINQHSRQDAEKLGGAYGIKPGVQILPANRAESVDVKALPARDETTGEDFAL
Ga0222714_100033971	3300021961	Estuarine Water	KYQEMFNDYINQHAKQDAEKLGGAYGIKAGVEILPASRALSDAEVKALPARDPMTGEDSS
Ga0222712_104025243	3300021963	Estuarine Water	DYINQHSRQDAEKLGGAYGIKEGIEILPVSRTTDVTVKALPARDPMTGEDFDLS
Ga0222719_107438193	3300021964	Estuarine Water	SKQDADKLGGAYGIKPGVQILPANRSESVNVKALPARDETTGEDFAL
Ga0212029_10140291	3300022063	Aqueous	STWKYQEMFDDYINQHSKQDAEKLNGSYGMKDGVQILPESRVREAVDVKSLPAVDPNTGEDESMF
Ga0181337_10570021	3300022173	Freshwater Lake	KQDAAKLGGAYGIQDGVEILPQIRGNKEVDVTALPSAKDPVTGEDDSLL
Ga0181351_11689721	3300022407	Freshwater Lake	KTLFFDYINQHAKQDADKLGGAYGIKEGVEILPVSRTIETFEVKALPARNPMTGEDDSLL
Ga0255751_102176521	3300023116	Salt Marsh	DYINQHAKQDAKKLNGSYGIKEGLNILPVSRSNDTVDVKVLPARDEMTGEDSFL
Ga0255766_105497462	3300023172	Salt Marsh	RASTWKFQELFDDYINQHAKQDAKKLNGSYGIKEGLNILPVSRSNDAVDVKVLPPRDEMTGEDSFL
Ga0255772_102270801	3300023176	Salt Marsh	KFQEMYDDYINQHSRQDAEKLGGSYGIKEGVAIMPVSRTVESVDVKALPQRDSATGEDASLL
Ga0208794_10120291	3300025093	Marine	RQDAQKLGGAYGIKEGVEILPVSRATDAVDVKALPARDPMTGEDSSL
Ga0208424_10295193	3300025445	Aqueous	TWKYQEMFNDYINQHSRQDAQRLGGAYGIKAGVEILPVSRTTDAVDVKALPARDEMTGEDLSL
Ga0208161_10558861	3300025646	Aqueous	QHARQDAQKLGGAYGIKEGVEILPVSRATDAVDVKALPARDPMTGEDSSL
Ga0208161_10858811	3300025646	Aqueous	KFQEMFSDYINQHARQDAQKLGGAYGIKEGVEILPVSRTTDAVEVKALPARDPMTGEDADLS
Ga0208898_10302531	3300025671	Aqueous	YINQHARQDAQKLGGAYGIKEGVEILPVSRATDTVDVKALPGRDPLTGEDASL
Ga0208162_10767601	3300025674	Aqueous	HARQDAQKLNGAYGIKEGVEILPVSRTNNTVDVQALPARNEMTGEDSSL
Ga0208767_11572141	3300025769	Aqueous	SDYINQHARQDAQKLGGAYGIKEGVEILPVSRTTDAVDVKALPARDPLTGEDDSL
Ga0208009_10543471	3300027114	Deep Subsurface	FADYINIHAKQDAEKLGGAYGIKEGVEILPASRGGDVDVKLLASAQDPDTGENYSF
Ga0209704_11178731	3300027693	Freshwater Sediment	RLDAQRLGGAYGIKEGVQILPVSRTTDVTDETNAVNVKALPARNELTGEDASLL
Ga0209288_101431611	3300027762	Freshwater Sediment	QEMFDDYINQHSRQDAQRLGGAYGIKDGVQILPVSRTTDAVDVKALPARDELTGEDASLL
Ga0209500_100905225	3300027782	Freshwater Lake	DRASTWKYQEMFEDYINTHAKQDAEKLGGAYGIKPGVQILPANRGESVDVKALPARDETTGEDFAL
Ga0209246_102530943	3300027785	Freshwater Lake	KLGGAYGIQDGVEILPQVRGNKEVDVTALPSAKDPVTGEDDSLL
Ga0209972_102064663	3300027793	Freshwater Lake	DDYINIHAKQDAQKLNGSYGMKPGVQVLPVSRISDAVEVKSLPARNELTGEDEML
Ga0209536_1002161055	3300027917	Marine Sediment	QHARQDAQKLGGAYGIKEGVEILPVSRATDAVDVKALPAPDPMTGEDSSL
Ga0209536_1011025824	3300027917	Marine Sediment	EMFSDYINQHARQDAQKLGGAYGIKEGVEILPVSRTTDAVDVKALPARDPMTGEDDSL
Ga0209536_1027304553	3300027917	Marine Sediment	SDYIIQHARQDAEKLGGAYGIKQGVEILPVSRTSDAVDVKALPSRDPMTGEDASL
Ga0209400_10202201	3300027963	Freshwater Lake	IMQHSRQDAAKLGGAYGIKDGIEILPECRITDVAALPSAKDPVTGEDDSLL
Ga0209079_102067823	3300027972	Freshwater Sediment	KQDAEKLGGAYSIKPGVQILPANRGESVDVKALPARDETTGEDFAL
Ga0119944_10226244	3300029930	Aquatic	DRESTWKMQEMFDDYINVHSRQDAEKLGGAYGIKAGVQILPESRTTDAIDVKSLPSRDEVTGEDSSL
Ga0119945_10161171	3300029933	Aquatic	RESTWKFQEMFSDYINQHARQDAEKLGGAYGIKAGVEILPVTRTTDVEVKALPGRDAVTGEDDSLL
Ga0307378_106285871	3300031566	Soil	RASTWKYQEMFNDYINQHSRQDAEKLGGAYGIKPGVQILPANRAESVDVKALPARDETTGEDFAL
Ga0307376_109225541	3300031578	Soil	DAEKLGGAYGIKPGVQILPANRSESVDVKALPARDETTGEDFAL
Ga0307377_102976144	3300031673	Soil	YINQHSRQDAQRLGGAYGIKDGVQILPVSRTTDAVDVKSLPARNELTGEDSSL
Ga0315909_100047891	3300031857	Freshwater	HDYINQHAKQDADKLGGAYGIKDGVEILPASRTTDPIDVKALPSRDELTGEDSSL
Ga0315909_104399081	3300031857	Freshwater	HDYINQHAKQDADKLGGAYGIKDGVEILPASRTTDPIDVKALPSRDELTGEDASLN
Ga0315909_105730013	3300031857	Freshwater	DRESTWKMQEMFDDYINQHSRQDAQRLNGAYGIKDGVQILPVSRTTDAVEVKALPSRNELTGEDESL
Ga0315909_107028301	3300031857	Freshwater	DMFSDYINQHARQDAQKLGGAYGIREGVEILPVSRTTDTVDVKALPARDPLTGEDDSL
Ga0315903_105529083	3300032116	Freshwater	KQDADKLGGAYGIKDGVEILPASRTTDPIDVKALPSRDELTGEDASLN
Ga0315295_116466633	3300032156	Sediment	DYINQHSRQDAEKLGGAYGIKPGVEILPANRGEAVNVKALPARDETTGEDFSL
Ga0316617_1001769653	3300033557	Soil	RQDAEKLGGAYGIKQGVEILPVSRSSDAVDVKALPARNEVTGEDDSLF
Ga0334980_0148762_776_952	3300033816	Freshwater	MFSDYINQHARQDAQKLGGAYGIKEGVEILPVSRTTDTVDVKALPARDPLTGEDADLM
Ga0334977_0573508_332_505	3300033978	Freshwater	MFADYINQHARQDAEKLGGAYGIKEGVEILPASRGGDVNAKLLASAQDPDTGENYSF
Ga0335004_0532624_1_171	3300034021	Freshwater	QDYINVHAKQDSDKLGGAYGIKEGVEILPVSRTMDPVDVKALPSRDELTGEDASLL
Ga0334995_0775178_2_178	3300034062	Freshwater	LYTCDYINQHARQDAEKLGGAYGIKAGVEILPASRGGEVEVKALASAQDPETGENSSF
Ga0310130_0012021_2743_2916	3300034073	Fracking Water	MFSDYINQHSRQDAEKLGGAYGIKEGIEILPVSRTTDVEVKALPARDPMTGEDFDLS
Ga0310130_0074825_840_1007	3300034073	Fracking Water	SDYINIHAKQDAQKLGGAYGIKEGVEIQPVSRITDAVDVKALPARDPLTGEDDSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091912

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences