Metagenome / Metatranscriptome Family F091901

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091901
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	60 residues
Representative Sequence	MKPHPEMIEGPEAFTRFDALVRKVLSVPHEEIMRREAEYKRQSAMNPNRRGPKPKVKRSR
Number of Associated Samples	86
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.43 %
% of genes near scaffold ends (potentially truncated)	23.36 %
% of genes from short scaffolds (< 2000 bps)	68.22 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.963 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (14.019 % of family members)
Environment Ontology (ENVO)	Unclassified (37.383 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.318 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.23% β-sheet: 0.00% Coil/Unstructured: 64.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF12762	DDE_Tnp_IS1595	29.91
PF12686	DUF3800	6.54
PF00873	ACR_tran	1.87
PF06296	RelE	0.93
PF16762	RHH_6	0.93
PF05973	Gp49	0.93
PF00857	Isochorismatase	0.93
PF13442	Cytochrome_CBB3	0.93
PF00005	ABC_tran	0.93
PF02874	ATP-synt_ab_N	0.93
PF00962	A_deaminase	0.93
PF14163	SieB	0.93
PF03404	Mo-co_dimer	0.93
PF02472	ExbD	0.93
PF00459	Inositol_P	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.93
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG1816	Adenosine/6-amino-6-deoxyfutalosine deaminase	Nucleotide transport and metabolism [F]	0.93
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.93
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.93
COG4737	Uncharacterized conserved protein	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.96 %
Unclassified	root	N/A	28.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.96 %
Unclassified	root	N/A	28.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.96 %
Unclassified	root	N/A	28.04 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.01 %
Unclassified	root	N/A	28.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	50.47 %
Unclassified	root	N/A	28.04 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	40.19 %
Unclassified	root	N/A	28.04 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.87 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.93 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	0.93 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.93 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	40.19 %
Unclassified	root	N/A	28.04 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	4.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.93 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	40.19 %
Unclassified	root	N/A	28.04 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2.80 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.93 %
unclassified Nitrospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae	0.93 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	40.19 %
Unclassified	root	N/A	28.04 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.93 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.93 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.93 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	40.19 %
Unclassified	root	N/A	28.04 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %
Candidatus Sulfopaludibacter sp. SbA6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	0.93 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.93 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.93 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.93 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10066162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1831	Open in IMG/M
3300004631\|Ga0058899_11449868	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	696	Open in IMG/M
3300004631\|Ga0058899_12126490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1127	Open in IMG/M
3300005467\|Ga0070706_100216651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1787	Open in IMG/M
3300005468\|Ga0070707_100806969	Not Available	902	Open in IMG/M
3300005534\|Ga0070735_10065448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2356	Open in IMG/M
3300005993\|Ga0080027_10388271	Not Available	562	Open in IMG/M
3300006046\|Ga0066652_100940180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	823	Open in IMG/M
3300006050\|Ga0075028_100023574	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2748	Open in IMG/M
3300006052\|Ga0075029_100000946	All Organisms → cellular organisms → Bacteria	16767	Open in IMG/M
3300006642\|Ga0075521_10241610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	863	Open in IMG/M
3300006795\|Ga0075520_1110915	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1233	Open in IMG/M
3300009012\|Ga0066710_101724637	Not Available	951	Open in IMG/M
3300009137\|Ga0066709_103014593	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	618	Open in IMG/M
3300009147\|Ga0114129_13158060	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	537	Open in IMG/M
3300009524\|Ga0116225_1201303	Not Available	900	Open in IMG/M
3300009623\|Ga0116133_1095540	Not Available	753	Open in IMG/M
3300009628\|Ga0116125_1003662	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5092	Open in IMG/M
3300009665\|Ga0116135_1273061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	662	Open in IMG/M
3300009759\|Ga0116101_1114452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	637	Open in IMG/M
3300009764\|Ga0116134_1031606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	2097	Open in IMG/M
3300009764\|Ga0116134_1200178	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	695	Open in IMG/M
3300009839\|Ga0116223_10487163	Not Available	719	Open in IMG/M
3300010379\|Ga0136449_100016263	All Organisms → cellular organisms → Bacteria	19601	Open in IMG/M
3300010379\|Ga0136449_100248906	All Organisms → cellular organisms → Bacteria	3304	Open in IMG/M
3300012200\|Ga0137382_11037709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300012354\|Ga0137366_10164756	All Organisms → cellular organisms → Bacteria → Acidobacteria	1665	Open in IMG/M
3300012359\|Ga0137385_11659705	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	503	Open in IMG/M
3300012361\|Ga0137360_11554443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	566	Open in IMG/M
3300012362\|Ga0137361_11555879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	583	Open in IMG/M
3300012469\|Ga0150984_116458198	Not Available	630	Open in IMG/M
3300014151\|Ga0181539_1045987	All Organisms → cellular organisms → Bacteria	2093	Open in IMG/M
3300014151\|Ga0181539_1098197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1239	Open in IMG/M
3300014151\|Ga0181539_1337421	Not Available	546	Open in IMG/M
3300014160\|Ga0181517_10005314	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	11420	Open in IMG/M
3300014164\|Ga0181532_10157083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1363	Open in IMG/M
3300014200\|Ga0181526_10572864	Not Available	714	Open in IMG/M
3300014491\|Ga0182014_10064534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2402	Open in IMG/M
3300014492\|Ga0182013_10158273	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1418	Open in IMG/M
3300014495\|Ga0182015_10271495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1115	Open in IMG/M
3300014501\|Ga0182024_10205455	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2687	Open in IMG/M
3300014501\|Ga0182024_10313254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2067	Open in IMG/M
3300014501\|Ga0182024_10802986	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1146	Open in IMG/M
3300014502\|Ga0182021_10017338	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8542	Open in IMG/M
3300014839\|Ga0182027_12292628	Not Available	510	Open in IMG/M
3300014873\|Ga0180066_1020867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1202	Open in IMG/M
3300014882\|Ga0180069_1045618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	977	Open in IMG/M
3300016701\|Ga0181509_1117400	All Organisms → cellular organisms → Bacteria → Acidobacteria	2751	Open in IMG/M
3300016750\|Ga0181505_10613944	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	556	Open in IMG/M
3300016750\|Ga0181505_11031592	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300017948\|Ga0187847_10355067	Not Available	803	Open in IMG/M
3300017972\|Ga0187781_10226562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1320	Open in IMG/M
3300018026\|Ga0187857_10011804	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	5338	Open in IMG/M
3300018033\|Ga0187867_10013330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5550	Open in IMG/M
3300018035\|Ga0187875_10395726	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	739	Open in IMG/M
3300018038\|Ga0187855_10104619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1708	Open in IMG/M
3300018047\|Ga0187859_10045824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2327	Open in IMG/M
3300020579\|Ga0210407_10876740	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	689	Open in IMG/M
3300020581\|Ga0210399_11061254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	650	Open in IMG/M
3300021168\|Ga0210406_10040965	All Organisms → cellular organisms → Bacteria → Acidobacteria	4109	Open in IMG/M
3300021168\|Ga0210406_10048277	All Organisms → cellular organisms → Bacteria	3738	Open in IMG/M
3300021476\|Ga0187846_10272753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	701	Open in IMG/M
3300021861\|Ga0213853_11254543	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1526	Open in IMG/M
3300022713\|Ga0242677_1087881	Not Available	510	Open in IMG/M
3300022714\|Ga0242671_1129056	Not Available	505	Open in IMG/M
3300022873\|Ga0224550_1022619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	889	Open in IMG/M
3300022881\|Ga0224545_1001767	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4221	Open in IMG/M
3300023088\|Ga0224555_1014810	All Organisms → cellular organisms → Bacteria	4273	Open in IMG/M
3300024288\|Ga0179589_10362509	Not Available	660	Open in IMG/M
3300027641\|Ga0208827_1032436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1855	Open in IMG/M
3300027854\|Ga0209517_10054143	All Organisms → cellular organisms → Bacteria → Acidobacteria	2993	Open in IMG/M
3300027854\|Ga0209517_10507375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	656	Open in IMG/M
3300027889\|Ga0209380_10680713	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	591	Open in IMG/M
3300027898\|Ga0209067_10000897	All Organisms → cellular organisms → Bacteria	18687	Open in IMG/M
3300027911\|Ga0209698_10013309	All Organisms → cellular organisms → Bacteria	8124	Open in IMG/M
3300027986\|Ga0209168_10101527	Not Available	1484	Open in IMG/M
3300029943\|Ga0311340_10013933	All Organisms → cellular organisms → Bacteria	10215	Open in IMG/M
3300029999\|Ga0311339_10057911	All Organisms → cellular organisms → Bacteria	5118	Open in IMG/M
3300029999\|Ga0311339_10402658	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1426	Open in IMG/M
3300030007\|Ga0311338_10435089	Not Available	1396	Open in IMG/M
3300030399\|Ga0311353_10232221	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300030509\|Ga0302183_10181843	Not Available	823	Open in IMG/M
3300030618\|Ga0311354_11355030	Not Available	636	Open in IMG/M
3300031231\|Ga0170824_101425396	Not Available	524	Open in IMG/M
3300031234\|Ga0302325_10607047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1609	Open in IMG/M
3300031234\|Ga0302325_10668369	Not Available	1507	Open in IMG/M
3300031234\|Ga0302325_13274719	Not Available	515	Open in IMG/M
3300031236\|Ga0302324_101181368	Not Available	1021	Open in IMG/M
3300031236\|Ga0302324_101701974	Not Available	807	Open in IMG/M
3300031236\|Ga0302324_102200457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	684	Open in IMG/M
3300031525\|Ga0302326_10044493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	8580	Open in IMG/M
3300031525\|Ga0302326_12794752	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	603	Open in IMG/M
3300031708\|Ga0310686_111926640	Not Available	1534	Open in IMG/M
3300032160\|Ga0311301_10148529	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	4252	Open in IMG/M
3300032893\|Ga0335069_10061021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	4891	Open in IMG/M
3300032895\|Ga0335074_10005762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	17155	Open in IMG/M
3300032895\|Ga0335074_10256866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2049	Open in IMG/M
3300032898\|Ga0335072_10452828	Not Available	1352	Open in IMG/M
3300033158\|Ga0335077_11175470	Not Available	753	Open in IMG/M
3300033158\|Ga0335077_11305890	Not Available	704	Open in IMG/M
3300033402\|Ga0326728_10039365	All Organisms → cellular organisms → Bacteria	7460	Open in IMG/M
3300033402\|Ga0326728_10521086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	957	Open in IMG/M
3300033402\|Ga0326728_10586161	Not Available	874	Open in IMG/M
3300033405\|Ga0326727_10177528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2408	Open in IMG/M
3300033405\|Ga0326727_10951781	Not Available	634	Open in IMG/M
3300033983\|Ga0371488_0232179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	912	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.13%
Host-Associated	Host-Associated	1.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.03%
Aquatic	Environmental → Aquatic	27.10%
Plants	Host-Associated → Plants	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.66%
Peat	Environmental → Terrestrial → Peat	22.43%
Freshwater	Environmental → Aquatic → Freshwater	21.50%
Sediment	Environmental → Aquatic → Sediment	5.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.87%
Cave	Environmental → Terrestrial → Cave	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	22.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.61%
Loam	Environmental → Terrestrial → Soil → Loam	4.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	22.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.54%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.02%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.41%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.61%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	5.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.80%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.87%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.87%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.87%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.93%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100661624	3300000567	Peatlands Soil	MSTDHHRLRSLPECVEGLEAAARFDALVRKVLSVPHDEIMRREEEYKQRSVMNPRRRGPKRKLKPSA*
Ga0058899_114498681	3300004631	Forest Soil	SDPETKFTGCIEGPEATRRFDALVRKVLSVPREEILRREALYKKQSLANPNRRGPKRKVKRSAS*
Ga0058899_121264902	3300004631	Forest Soil	MKSEPATSSPNAIEGTEAAMRFDTLVRKVLSVPHNEIMRREAEYKRQSLANPNRRGPKPKAKR*
Ga0070706_1002166512	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MMDFVKPKPEYEEGPQVWKRFDTLVRKVLSVPHDEIMRREAEYKRQSAMNPNRRGPKPKVKPSA*
Ga0070707_1008069691	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKPNAENIEGPEAARLFDTLVRKVLSVPREEILRREAEYKRQSAMNPNRRGPKKKHKS*
Ga0070735_100654483	3300005534	Surface Soil	MAYHTIMKAHPDEGPETAARFDALVRKVLSVPHEEIMRREAEYQKQAKQNPHRRGPKPKAKR*
Ga0080027_103882712	3300005993	Prmafrost Soil	MKTPTEIIEGPEAKARFDSLLRMVLSVSHDESMRREAEYKRESATNPN*
Ga0066652_1009401802	3300006046	Soil	GPQAATRFDAMVRKLLSVPHAEIQRREAEYRKQSAANPKRRGPKPKHAS*
Ga0075028_1000235742	3300006050	Watersheds	VKPQPETVEGPDAPARFDVLVRKVLSVPHEEIMRREAEYKRQSAMNPHRRGPKPKRKR*
Ga0075029_10000094615	3300006052	Watersheds	MKPNVEMIQEPEASVRFDTLVRKVLSIPRKEIMRREAEYKRQSALNPRRRGPKKKRDQSFSHK*
Ga0075521_102416101	3300006642	Arctic Peat Soil	MKPKETAEGPEAAIRFDALVRKVLSIPHDEIMRRKAEYKRQSAANPNRRGPFVPFLFVSV
Ga0075520_11109154	3300006795	Arctic Peat Soil	MKAKPEYVEGPEAAARFDALVRKVLAVPHTEIVRREAEYRRQSALNPHRRGPKPKVKPSA
Ga0066710_1017246372	3300009012	Grasslands Soil	MPVEDHHRLPECNEGPEVAKRFDALVRKVLAVPHDENVRREAEYKRHSALNPNRRGPKPKIKPSA
Ga0066709_1030145931	3300009137	Grasslands Soil	MKPHPEMIEGPEAFKRFDALVRKVLSVPHEEIMRREAEYKRQSAMNPKRRGPKPKGKASVPRA*
Ga0114129_131580602	3300009147	Populus Rhizosphere	TFSCHHVGMKPHPEKIEGPEAAARFDAIVRKVLSVPHDEIMRREAEYKRQSAMNANRRGPKRKIKPSA*
Ga0116225_12013032	3300009524	Peatlands Soil	MNPRPEMIEGPEAAARFDALVRKVLSVPHEEIMRREAAYQRQAARNPNRRGPKPKVTRKRARGSRITPFK*
Ga0116133_10955402	3300009623	Peatland	MSMKPSSEIIEGPEAVARFDALVRRVLSVPHAEIMRREEKYKRQSLANPNRRGPK
Ga0116125_10036624	3300009628	Peatland	MNGKPDRVEDPEVAARFDALVRRVLSVPHEEIIRREAEYKRQSAMNPNRRGPKRRAKSE*
Ga0116135_12730612	3300009665	Peatland	MKQQDIEGTGAAARFEALVRRVLSVPHEVVMRREAEYKRQSLLNPNRRGPKPKRMRPNAA
Ga0116101_11144522	3300009759	Peatland	MNGKRGTIIETEAAARFDAIVRKVLSVPHEEIMRREAEYRRQSALNPNRRGPKRKTKPEN
Ga0116134_10316064	3300009764	Peatland	MKQPDAEGAEAAARFDALVRKVLSVPHEEIMRREAEYKRQSAMNPHRRGPKPK
Ga0116134_12001782	3300009764	Peatland	MDAKQADEGADVATRFDALVRKVLSVPHEEIMRREAEYKRQSAMSPTRRGPKRKAKT*
Ga0116223_104871631	3300009839	Peatlands Soil	PMKPQTETVEGPEAAIRFDTLVRKVLSVPHSEIMRREAEYKRQSALNPKRRGPKPKVKPSSVSPDAART*
Ga0136449_10001626320	3300010379	Peatlands Soil	MKQQPEYVEGPEATARFDALVRKVLSVPHAEIMRREAEYKQRSNENPHKRGPKPKCKDS*
Ga0136449_1002489063	3300010379	Peatlands Soil	MIEGPEATARFDALVRKVLSVPHEEIMRREAEYQRQAAPNPNRGGPKRTERAKKKG*
Ga0137382_110377091	3300012200	Vadose Zone Soil	MKREPQPVNGPETMARFDAIVRKVLSVSHEEIMRREAEYKRQADLNPNKRGPKPKAR*
Ga0137366_101647563	3300012354	Vadose Zone Soil	MKPKPEYVEGPEAAARFDTLVRKVLSVSHEEIMRREAEYKRQSAANPHRRGPKPKVKPSA
Ga0137385_116597051	3300012359	Vadose Zone Soil	MKPHPEMIEGPEAFKRFDALVRKVLSVPHEEIMRREAEYKRQSAMNPKRRGPKRKPKR*
Ga0137360_115544431	3300012361	Vadose Zone Soil	PKPEYEEGPQVLKRFDALVRKVLSVPHEEIVRREAEYKRQSALNSHRRGPKPKVKPSA*
Ga0137361_115558791	3300012362	Vadose Zone Soil	MKPKPEYEEGPQVLKRFDALVRKVLSVPHEEIVRREAEYKRQSALNSHRRGPKPKVKPSA
Ga0150984_1164581981	3300012469	Avena Fatua Rhizosphere	MKAKPEYVEGPEAATRFDAFVRKILSVPHSEIVKREAEYKRQSTANPNRRGPKPKRKLR*
Ga0181539_10459873	3300014151	Bog	MKAKAEYAEGPEVAAWFDVLVRKVLSVPHDEIVRREAEYKRLSALNPHRRGPKPKFK*
Ga0181539_10981973	3300014151	Bog	MKPKPEYVEGPESALRFDALVRRVLSVPHDQIMRREAEYKRLSALNPHRRGPKPKAK*
Ga0181539_13374212	3300014151	Bog	MMELMKSKTEYVEGPEAAARFDALVRKVLSVPHTEIMRREADYRRLSALNPHRRGPKPKAK*
Ga0181517_100053149	3300014160	Bog	MSMKPSSEIIEGPEAVARFDALVRRVLSVPHAEIMRREEKYKRQSLANPNRRGPKPKAKVK*
Ga0181532_101570831	3300014164	Bog	MKPHPEPIEGPEASARFDALVRQVLSVPHAEIMRREAEYQKQSQENPNRRGPKPKVKPSV
Ga0181526_105728642	3300014200	Bog	MVARMKPHPEPIEGPEASARFDALVRQVLSVPHAEIMRREAEYQKQSQENPNRRGPKPKVKPSV*
Ga0182014_100645342	3300014491	Bog	MDMKPLEQSEGQAAFERFDALVRKVLSVPHSEIMRREAEYKKQSDANPHKRGPKRKIKPSAS*
Ga0182013_101582732	3300014492	Bog	MVARMKPHPEPIEGPEAAARFDALVRQVLSVPHAEIMRREAEYKRQSDANPHKRGPKTQKSANDSRT*
Ga0182015_102714952	3300014495	Palsa	MDGKQPDVEGAEVAARFDALVRKVLSVPHEGIMRREAEYKRQSLLNPQRRGPKPKIKS*
Ga0182024_102054552	3300014501	Permafrost	MKTHTETIEGPEAWTRFDALVTAVMKVPHSVIVEREAEYKRQAALNPKRRGPKRKPKPSTSDHAEATN*
Ga0182024_103132544	3300014501	Permafrost	DMIYGMMESMKQTGTIEGTEAAARFDALLQKVLSVSRAEIMRREAEYQREAAKNPHRRGPKPKAKH*
Ga0182024_108029862	3300014501	Permafrost	MKANPEPIEGPEASKRFDALVRKVLSVPHDEIMRREAEYKRQSALNPNRRGPKPKGKAGN
Ga0182021_100173387	3300014502	Fen	MRDRTQESTEGPQAASRFDALVRKVLSVPHAEIMRREAEYKRQSLANPNRRGPKPKLKPASSLPTA*
Ga0181519_104098461	3300014658	Bog	MSMKPSSEIIEGPEAVARFDALVRRVLSVPHAEIMRREEKYKRQSLANPNR
Ga0182027_122926281	3300014839	Fen	MNKAMKTEPERMEGVEAMERFNALVRKVLSVPREEIMRREAEYRRLAALNPHKRGPKPKAG*
Ga0180066_10208671	3300014873	Soil	MKLKPEFLEGPEAAARFNALVRKVLSVPHEEIMRREAEYKRQSAMNPNRRGPKPKRPTT*
Ga0180069_10456181	3300014882	Soil	TIEGPEAYRRFDALVRKVLSVPHEEIMRREAEYKRQSAMNPNRRGPKRKVKPSAFPGPGA
Ga0181509_11174001	3300016701	Peatland	GPEAVARFDALVRRVLSVPHAEIMRREEKYKRQSLANPNRRGPKPKAKVK
Ga0181505_106139441	3300016750	Peatland	EASARFDALVRQVLSVPHAEIMRREAEYQKQSQENPNRRGPKPKVKPSV
Ga0181505_110315921	3300016750	Peatland	PVKPEYIEGPEAAARFDAFVRQVIAVPHEEIMRREAEYRRKVALNPRKRGPKPKAKPSEQ
Ga0187847_103550672	3300017948	Peatland	MKPSTNAVEGPEAAKRFVALVRKELSVPHEEIVRREANYKRQSLTNPNRRGPKRKAKS
Ga0187781_102265622	3300017972	Tropical Peatland	MKSEPEPVNGPDAMARLDVLVRKVLTVPHAEIMRREGEYKRKSDANPSKRGPKRKP
Ga0187857_100118045	3300018026	Peatland	MKQPDAEGAEAAARFDALVRKVLSVPHEEIMRREAEYKRQSAMNPHRRGPKPKVKPK
Ga0187867_100133304	3300018033	Peatland	MSMKPSSEIIEGPEAVARFDALVRRVLSVPHAEIMRREEKYKRQSLANPNRRGPKPKAKV
Ga0187875_103957261	3300018035	Peatland	MKPPSPPCISGKTEAEFPESQEAAARFDALVRRVLSVPHEEIMRREAEYKRQSALNPNRRGPKRKVKSQ
Ga0187855_101046193	3300018038	Peatland	MNEKQPDIEGPEAAARFDALVRKVLSVPHEEIVRREAEYKRQSLLNPHRRGPKLKVKAK
Ga0187859_100458243	3300018047	Peatland	MNGKPDRVEDPEVAARFDALVRRVLSVPHEEIIRREAEYKRQSAMNPNRRGPKRRAKSE
Ga0210407_108767402	3300020579	Soil	MKPHTPEYIEGPEAYQRFDALVRKVLSVPHEEIMRREAEYKRQSAMNPNRRGPKRKANPAAQ
Ga0210399_110612542	3300020581	Soil	MKSPSEKTEGPEPPSRFDVLVRKVLSVPHDEIMRREAEYKRQSALNPKRRGPKRKAKD
Ga0210406_100409653	3300021168	Soil	MKPHTPEYIEGPEAYQRFDALVRKVLSVPHEEIMRREAEYKRQSAMNPNRRGPKPKVESKRMTKG
Ga0210406_100482774	3300021168	Soil	MKPHPEMIEGPEAFTRFDALVRKVLSVPHEEIMRREAEYKRQSAMNPNRRGPKPKVKRSR
Ga0187846_102727532	3300021476	Biofilm	MIEGHEAFARFDALVRKVLSVPHKEIMRREAEYKKQSAANPRRRGPKTKRKGSRRA
Ga0213853_112545433	3300021861	Watersheds	GRVKPQPETVEGPDAPARFDVLVRKVLSVPHEEIMRREAEYKRQSAMNPHRRGPKPKRKR
Ga0242677_10878811	3300022713	Soil	MAIDQLSAIEGPEAAKRFDAMVRKVLTVPHSVIVEREAEYKRQSLANPNRRGPKRRVNP
Ga0242671_11290561	3300022714	Soil	MPATPNSDAIEGPEAAKRFDAMVRKVLAVPHSVIMEREAEYKRQSMANPNRRGPKPK
Ga0224550_10226192	3300022873	Soil	MDGKQPDVEGAEVAARFDALVRKVLSVPHEGIMRREAEYKRQSLLNPQRRGPKPKIKS
Ga0224545_10017673	3300022881	Soil	MGFMKPHPENEGPEAAKQFDALVRKVLSVPHEEIMRREAEYKRQSLANPRRRGPKPKANA
Ga0224555_10148104	3300023088	Soil	MVARMKPHPEPIEGPGAAARFDALVRQVLSVPHAEIMRREAEYQRQSQANPHRRGPKSKVKPSSS
Ga0179589_103625092	3300024288	Vadose Zone Soil	MESDPERVNGPETMARLDGIVRHVLTISHEEIKRREEEYKRQASLNPKRRGPKPRIK
Ga0208827_10324363	3300027641	Peatlands Soil	MSTDHHRLRSLPECVEGLEAAARFDALVRKVLSVPHDEIMRREEEYKQRSVMNPRRRGPKRKLKPSA
Ga0209517_100541433	3300027854	Peatlands Soil	MNPRPEMIEGPEAAARFDALVRKVLSVPHEEIMRREAAYQRQAARNPNRRGPKPKVTRKRARGSRITPFK
Ga0209517_105073751	3300027854	Peatlands Soil	MKQQPEYVEGPEATARFDALVRKVLSVPHAEIMRREAEYKQRSNENPHKRGPKPKCKDS
Ga0209380_106807131	3300027889	Soil	MKPYTPEMIEGPEAFQRFDALVRKVLSVPHEEIMRREAEYKRQSAMNPNRRGPKRKEKTKAQT
Ga0209067_1000089715	3300027898	Watersheds	MKPNVEMIQEPEASVRFDTLVRKVLSIPRKEIMRREAEYKRQSALNPRRRGPKKKRDQSFSHK
Ga0209698_100133092	3300027911	Watersheds	MNGKPETIEGPEVAAAFDALVRKVLSVPHDEIMRREAEYKRQSALNPHRRGPKPKLPASPVTDFEE
Ga0209168_101015273	3300027986	Surface Soil	MAYHTIMKAHPDEGPETAARFDALVRKVLSVPHEEIMRREAEYQKQAKQNPHRRGPKPKAKR
Ga0311340_100139335	3300029943	Palsa	MVSRADEGTEAAARFDALMRKVLSVPREEIVCREAEYKRQSALDPNRRGSKPKDKHA
Ga0311339_100579115	3300029999	Palsa	MVSRADEGTEAAARFDALMRKVLSVPREEIMCREAEYKRQSALDPNRRGSKPKDKHA
Ga0311339_104026581	3300029999	Palsa	TIEGPEAAARFDALVRKVLSVPHSEIMRREEEYQRQSLANPKRRGPKRKVLKPSA
Ga0311338_104350893	3300030007	Palsa	MVSRADEGTAAAARFDALMRKVLSVPREEIMCREAEYKRQSALDPNRRGSKPKDKHA
Ga0311353_102322213	3300030399	Palsa	MVSRADEGTEAAARFDALMRKVLSVPREEILCREAEYKRQSALDPNRRGSQPKDKHA
Ga0302183_101818431	3300030509	Palsa	AARFDALMRKVLSVPREEIMCREAEYKRQSALDPNRRGSKPKDKHA
Ga0311354_113550302	3300030618	Palsa	MVSRADEGTEAAARFDALMRKVLSVPREEIVCREAEYKRQSALDPNRRGSQPKDKHA
Ga0170824_1014253962	3300031231	Forest Soil	MNRQDETLEGPEAAARFDTLVRKVLSVPHSEIMRREAEYKWQAERNPNKRGPKPKAK
Ga0302325_106070473	3300031234	Palsa	MDNGNMKTDPQETIEGPEAAARFDALVRKVLSVPHAEIMRRESQYKKQSMENPNRRGPKPKKA
Ga0302325_106683692	3300031234	Palsa	MKSKPEYIEGPEVTTRFDALVRKVLAVPHTEIMRREADYKKQSLANPKRRGPKPKRPPR
Ga0302325_132747192	3300031234	Palsa	MKQQPEQIEGPEATARFDALVRKVLSVPHAEIMRREAEYKKKSAANPNRRGPKTKVTS
Ga0302324_1011813682	3300031236	Palsa	MDNGNMKTDPQETIEGPEAAARFDALVRKVLSVPHAEIMRREEEYKKQSAANPNRRGPKPKVKPST
Ga0302324_1017019742	3300031236	Palsa	MKERQAEPIEGPEATARFDVLVRKVLSVPHAEIVRREAEYKKQSMANPKRRGPKRNRTV
Ga0302324_1022004571	3300031236	Palsa	MSGKPVEVEGTEASARFDALVRKVLSVPHEEIMRREAEYKRHSAENPNRRGPKRKVKS
Ga0302326_100444931	3300031525	Palsa	MKPQPGTIEGPEAAARFDALVRKVLSVPHSEIMRREEEYQRQSLANPKRRGPKRKVLK
Ga0302326_127947521	3300031525	Palsa	MDNGNMKTDPQETIEGPEAAARFDALVRKVLSVPHAEIMRREEEYKKHSAANPNRRGPKPKVKPST
Ga0310686_1119266404	3300031708	Soil	MKPQLEPIEGPEATACFDALVRKVLSVPHAEIMRREAEYKKQSLANPNRRGPKPSSKGDS
Ga0311301_101485293	3300032160	Peatlands Soil	MKPHPEMIEGPEAAARFDALVRKVLSVPHDEIMRREAAYQRQAAKNPNRRGPKRKTRT
Ga0335069_100610214	3300032893	Soil	MASMKAATEAPGTSQRMDALVRKVMSVPREEIMRREAEYKRQSLANPRRRGPKPKVKQ
Ga0335074_1000576214	3300032895	Soil	MKSEPGPVEGPEASALFDALVRKVLSVPHAEILRREEEYKKQAAQNPHKRGPKRKRKPTA
Ga0335074_102568665	3300032895	Soil	MKSNPGPEEGPEVFARFDALVRKVLSVPHDEVLRREAEYQKQAAINPHKRGPKPKKKS
Ga0335072_104528281	3300032898	Soil	MTHDEHFDGPEARARFDALVRKVLSVPHSEIMRREAAYKKQSMENPNRRGPKRKRSPDQ
Ga0335077_111754702	3300033158	Soil	HPEPIEGPEASALFDALVRKVLSVPHAEIMRREAEYQKQSLANPNRRGPKRKVKPSRSVS
Ga0335077_113058902	3300033158	Soil	MCHDEGMKPQPQPLAGKEATAAFDALVRKVLSVPHAEIMRREAEYKRQSLANPNRRGPKRKSAQ
Ga0326728_100393659	3300033402	Peat Soil	MKAKAEYAEGPEVAAWFDVLVRKVLSVPHDEIVRREAEYKRLSALNPHRRGPKPKFK
Ga0326728_105210862	3300033402	Peat Soil	MKTHPKPIEGPQVVAQFDALVRKVLSVPHAEIVRREAEYKLQSLANPNRRGPKPKLKPASVPPTA
Ga0326728_105861613	3300033402	Peat Soil	MKPIEGPEAARRFDALVRRVISVPHEEIMRREAEYKRRSKLNPHRRGPKPKTKP
Ga0326727_101775282	3300033405	Peat Soil	MGPTMKAKAEYAEGPEVAAWFDVLVRKVLSVPHDEIVRREAEYKRLSALNPHRRGPKPKF
Ga0326727_109517811	3300033405	Peat Soil	MKPIEGPEAARRFDALVRRVISVPHEEIMRREAEYKRRSKLNPHRRGPKP
Ga0371488_0232179_421_597	3300033983	Peat Soil	MNPKPEYVEGPEAALRFDSLVRRVLAVPHAEIMRREAEYKRQSAMNPHRRGPKPKGKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091901

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences