Metagenome / Metatranscriptome Family F091843

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091843
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	99 residues
Representative Sequence	MSVTEYLTDHNGNRVAFFYYIDSERYRTCPQLVWKCRDYPAFSGTCASKEEAFEAFKSVLKELKRKVPVHACDTCGLTSTKMEAQLTCPDCLTDE
Number of Associated Samples	53
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	54.21 %
% of genes near scaffold ends (potentially truncated)	24.30 %
% of genes from short scaffolds (< 2000 bps)	78.50 %
Associated GOLD sequencing projects	35
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.944 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (76.636 % of family members)
Environment Ontology (ENVO)	Unclassified (88.785 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.393 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.89% β-sheet: 21.14% Coil/Unstructured: 60.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00940	RNA_pol	3.74
PF00145	DNA_methylase	2.80
PF13884	Peptidase_S74	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG5108	Mitochondrial DNA-directed RNA polymerase	Transcription [K]	3.74
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	2.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
All Organisms	root	All Organisms	42.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Viruses	superkingdom	All Organisms → Viruses	28.97 %
cellular organisms	root	All Organisms → cellular organisms	13.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.56 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.08 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	5.61 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	1.87 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.28 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	5.61 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.87 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.93 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.41 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	5.61 %
Acidithiobacillia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia	1.87 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.87 %
bacterium ADurb.Bin157	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	0.93 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.93 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.41 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	5.61 %
Acidithiobacillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales	1.87 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.87 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.93 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.93 %
bacterium ADurb.Bin157	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.56 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	8.41 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	5.61 %
unclassified Acidithiobacillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → unclassified Acidithiobacillales	1.87 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.87 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.93 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.93 %
bacterium ADurb.Bin157	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.56 %
Parvibaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum	8.41 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	5.61 %
Acidithiobacillales bacterium SM23_46	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → unclassified Acidithiobacillales → Acidithiobacillales bacterium SM23_46	1.87 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.93 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.93 %
bacterium ADurb.Bin157	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.56 %
unclassified Parvibaculum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum	8.41 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	5.61 %
Acidithiobacillales bacterium SM23_46	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → unclassified Acidithiobacillales → Acidithiobacillales bacterium SM23_46	1.87 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.93 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.93 %
bacterium ADurb.Bin157	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.56 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	8.41 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	5.61 %
Acidithiobacillales bacterium SM23_46	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → unclassified Acidithiobacillales → Acidithiobacillales bacterium SM23_46	1.87 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	1.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.93 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.93 %
bacterium ADurb.Bin157	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10227032	Not Available	582	Open in IMG/M
3300001352\|JGI20157J14317_10093869	Not Available	1110	Open in IMG/M
3300001846\|ACM22_1021920	Not Available	541	Open in IMG/M
3300001960\|GOS2230_1016443	All Organisms → Viruses → Predicted Viral	1640	Open in IMG/M
3300006025\|Ga0075474_10080156	Not Available	1071	Open in IMG/M
3300006026\|Ga0075478_10027347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1910	Open in IMG/M
3300006752\|Ga0098048_1112303	Not Available	821	Open in IMG/M
3300006793\|Ga0098055_1037517	All Organisms → Viruses → Predicted Viral	1989	Open in IMG/M
3300006793\|Ga0098055_1365504	Not Available	535	Open in IMG/M
3300006802\|Ga0070749_10017701	All Organisms → Viruses → Predicted Viral	4540	Open in IMG/M
3300006802\|Ga0070749_10039414	All Organisms → Viruses → Predicted Viral	2908	Open in IMG/M
3300006802\|Ga0070749_10115399	Not Available	1580	Open in IMG/M
3300006802\|Ga0070749_10149011	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1361	Open in IMG/M
3300006802\|Ga0070749_10161873	All Organisms → Viruses → Predicted Viral	1297	Open in IMG/M
3300006802\|Ga0070749_10247373	Not Available	1011	Open in IMG/M
3300006802\|Ga0070749_10427668	Not Available	728	Open in IMG/M
3300006802\|Ga0070749_10730860	Not Available	528	Open in IMG/M
3300006810\|Ga0070754_10017336	All Organisms → Viruses → Predicted Viral	4299	Open in IMG/M
3300006810\|Ga0070754_10021188	All Organisms → Viruses → Predicted Viral	3789	Open in IMG/M
3300006810\|Ga0070754_10089092	Not Available	1542	Open in IMG/M
3300006810\|Ga0070754_10102343	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1414	Open in IMG/M
3300006810\|Ga0070754_10141786	Not Available	1155	Open in IMG/M
3300006810\|Ga0070754_10353284	Not Available	650	Open in IMG/M
3300006810\|Ga0070754_10356828	Not Available	646	Open in IMG/M
3300006810\|Ga0070754_10365673	Not Available	636	Open in IMG/M
3300006810\|Ga0070754_10371258	Not Available	630	Open in IMG/M
3300006810\|Ga0070754_10470582	Not Available	543	Open in IMG/M
3300006867\|Ga0075476_10166660	Not Available	816	Open in IMG/M
3300006867\|Ga0075476_10292661	Not Available	573	Open in IMG/M
3300006868\|Ga0075481_10020607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	2605	Open in IMG/M
3300006916\|Ga0070750_10049804	Not Available	2032	Open in IMG/M
3300006916\|Ga0070750_10094216	All Organisms → Viruses → Predicted Viral	1393	Open in IMG/M
3300006916\|Ga0070750_10209667	Not Available	859	Open in IMG/M
3300006916\|Ga0070750_10288617	Not Available	704	Open in IMG/M
3300006916\|Ga0070750_10383987	Not Available	588	Open in IMG/M
3300006919\|Ga0070746_10186792	Not Available	993	Open in IMG/M
3300006919\|Ga0070746_10310275	Not Available	722	Open in IMG/M
3300006919\|Ga0070746_10386894	Not Available	629	Open in IMG/M
3300006919\|Ga0070746_10423459	Not Available	594	Open in IMG/M
3300006919\|Ga0070746_10470304	Not Available	556	Open in IMG/M
3300007344\|Ga0070745_1031034	Not Available	2296	Open in IMG/M
3300007344\|Ga0070745_1067055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1446	Open in IMG/M
3300007344\|Ga0070745_1183220	Not Available	780	Open in IMG/M
3300007344\|Ga0070745_1304320	Not Available	567	Open in IMG/M
3300007345\|Ga0070752_1074699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1493	Open in IMG/M
3300007346\|Ga0070753_1020105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	2973	Open in IMG/M
3300007346\|Ga0070753_1073584	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin157	1363	Open in IMG/M
3300007346\|Ga0070753_1222920	Not Available	691	Open in IMG/M
3300007539\|Ga0099849_1041939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1928	Open in IMG/M
3300007539\|Ga0099849_1173949	Not Available	822	Open in IMG/M
3300007640\|Ga0070751_1087064	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1306	Open in IMG/M
3300007640\|Ga0070751_1129383	Not Available	1023	Open in IMG/M
3300007640\|Ga0070751_1253128	Not Available	668	Open in IMG/M
3300008012\|Ga0075480_10035917	All Organisms → Viruses → Predicted Viral	2972	Open in IMG/M
3300008012\|Ga0075480_10078983	Not Available	1874	Open in IMG/M
3300010149\|Ga0098049_1139567	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	751	Open in IMG/M
3300010149\|Ga0098049_1201492	Not Available	609	Open in IMG/M
3300010296\|Ga0129348_1080236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → unclassified Acidithiobacillales → Acidithiobacillales bacterium SM23_46	1160	Open in IMG/M
3300010297\|Ga0129345_1089079	Not Available	1150	Open in IMG/M
3300016734\|Ga0182092_1376170	All Organisms → Viruses → Predicted Viral	1315	Open in IMG/M
3300017950\|Ga0181607_10093539	All Organisms → Viruses → environmental samples → uncultured marine virus	1912	Open in IMG/M
3300017951\|Ga0181577_10775718	Not Available	579	Open in IMG/M
3300017985\|Ga0181576_10450797	Not Available	796	Open in IMG/M
3300017986\|Ga0181569_10270631	All Organisms → Viruses → Predicted Viral	1182	Open in IMG/M
3300018428\|Ga0181568_10122310	Not Available	2181	Open in IMG/M
3300019751\|Ga0194029_1005690	Not Available	1681	Open in IMG/M
3300019751\|Ga0194029_1081586	Not Available	557	Open in IMG/M
3300019756\|Ga0194023_1052599	Not Available	819	Open in IMG/M
3300020188\|Ga0181605_10341108	Not Available	614	Open in IMG/M
3300020191\|Ga0181604_10190430	All Organisms → Viruses → Predicted Viral	1003	Open in IMG/M
3300020439\|Ga0211558_10001304	Not Available	13577	Open in IMG/M
3300022050\|Ga0196883_1000944	All Organisms → Viruses → Predicted Viral	3158	Open in IMG/M
3300022057\|Ga0212025_1083213	Not Available	550	Open in IMG/M
3300022068\|Ga0212021_1069407	Not Available	722	Open in IMG/M
3300022158\|Ga0196897_1049053	Not Available	500	Open in IMG/M
3300022183\|Ga0196891_1006209	All Organisms → cellular organisms → Bacteria	2455	Open in IMG/M
3300022187\|Ga0196899_1007782	All Organisms → Viruses → Predicted Viral	4387	Open in IMG/M
3300022187\|Ga0196899_1024720	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2163	Open in IMG/M
3300022187\|Ga0196899_1069866	All Organisms → Viruses → Predicted Viral	1098	Open in IMG/M
3300022187\|Ga0196899_1070146	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1095	Open in IMG/M
3300022187\|Ga0196899_1078128	Not Available	1018	Open in IMG/M
3300025108\|Ga0208793_1027570	All Organisms → Viruses → Predicted Viral	1924	Open in IMG/M
3300025671\|Ga0208898_1006112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	6602	Open in IMG/M
3300025671\|Ga0208898_1012044	Not Available	4236	Open in IMG/M
3300025671\|Ga0208898_1013526	Not Available	3920	Open in IMG/M
3300025671\|Ga0208898_1038932	Not Available	1843	Open in IMG/M
3300025671\|Ga0208898_1066645	All Organisms → Viruses → Predicted Viral	1217	Open in IMG/M
3300025671\|Ga0208898_1084700	Not Available	1009	Open in IMG/M
3300025674\|Ga0208162_1013444	All Organisms → Viruses → Predicted Viral	3341	Open in IMG/M
3300025759\|Ga0208899_1009930	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	5368	Open in IMG/M
3300025759\|Ga0208899_1100214	All Organisms → Viruses → Predicted Viral	1083	Open in IMG/M
3300025759\|Ga0208899_1121968	Not Available	935	Open in IMG/M
3300025769\|Ga0208767_1063768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1639	Open in IMG/M
3300025810\|Ga0208543_1081378	Not Available	781	Open in IMG/M
3300025815\|Ga0208785_1040683	Not Available	1359	Open in IMG/M
3300025828\|Ga0208547_1066391	Not Available	1192	Open in IMG/M
3300025853\|Ga0208645_1018767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	3867	Open in IMG/M
3300025853\|Ga0208645_1249105	Not Available	592	Open in IMG/M
3300025853\|Ga0208645_1259703	Not Available	572	Open in IMG/M
3300025880\|Ga0209534_10173961	Not Available	1108	Open in IMG/M
3300025889\|Ga0208644_1088928	All Organisms → Viruses → Predicted Viral	1555	Open in IMG/M
3300025889\|Ga0208644_1117332	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1277	Open in IMG/M
3300025889\|Ga0208644_1120919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → unclassified Acidithiobacillales → Acidithiobacillales bacterium SM23_46	1250	Open in IMG/M
3300025889\|Ga0208644_1133263	All Organisms → Viruses → Predicted Viral	1166	Open in IMG/M
3300034374\|Ga0348335_066844	Not Available	1282	Open in IMG/M
3300034418\|Ga0348337_011688	All Organisms → Viruses → Predicted Viral	4993	Open in IMG/M
3300034418\|Ga0348337_021781	All Organisms → Viruses → environmental samples → uncultured marine virus	3202	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.20%
Freshwater	Environmental → Aquatic → Freshwater	2.80%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	78.50%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.41%
Oceanic	Environmental → Aquatic → Marine → Oceanic	6.54%
River	Environmental → Aquatic → Freshwater → River	2.80%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	78.50%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	7.48%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	6.54%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	76.64%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	7.48%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.61%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	2.80%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.87%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.87%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.93%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.93%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.93%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001846	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM22, ROCA_DNA119_0.2um_25b	Environmental	Open in IMG/M
3300001960	Marine microbial communities from South of Charleston, South Carolina, USA - GS014	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300016734	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041410CS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019751	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020439	Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)	Environmental	Open in IMG/M
3300022050	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022158	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)	Environmental	Open in IMG/M
3300022183	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025815	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025828	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_102270322	3300000116	Marine	MSVTEYLTDHNGNQVVFFYYIDSERFRTCPQIVWKCRDYPAFSGTCASKSEFIEQCKSVLKEIKKKVPVRACKDCGLTTPKLEAQSTCPECLIDE*
JGI20157J14317_100938691	3300001352	Pelagic Marine	MSVTEYLTDHNGNQVAFFYYIDSERYRTCPQLVWKCRDYPAFSGTCASKSEFIEQCKSVLKEIKKKVPVRVCKDCGLTSAKMEAQSTCPECITEPNTNK*
ACM22_10219202	3300001846	Marine Plankton	MSVTIYLTDHNGNQVAFFYYIDSERYSAVPKLIWKCKQHPEYSGSCASKSEFIECAKAVLKELKKVPVCKECGLTSQKFEAQDTCPECLSNLGE*
GOS2230_10164436	3300001960	Marine	MSVTEYLTDHTGRKIAFFYYIDSERYRTCPQLVWKCRDYPSFSGSCASREEAFEAFKGVLKELKRKVPVCKECGLTSDKFESQDTCPECLITEK*
Ga0075474_100801562	3300006025	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERYSVAPKLVWQCRDYRQYSGTCASKEEAFEAFKSVLKELKKKVPSQTCDTCGLTSPKMEAQDTCPDCLTDE*
Ga0075478_100273471	3300006026	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERYSAVPKLVWKCRQHPEYSGSCASKSEFIECAKAVLKELKKNRSLPVCDDELLMSEASNGVKSESKTCDNCGLTSQKFEAQDTCP
Ga0098048_11123031	3300006752	Marine	VKSIQAKRMNALERSDMSVTEYLTDHNGNRVAFFYYIDSERYRTCPQLVWKCRDYPTFSGTCASKEEAFEAFKSVLKELKKGKACDKCGLTSPKMEAQDTCPECLTEPTTNK
Ga0098055_10375172	3300006793	Marine	MNALERSDMSVTEYLTDHNGNRVAFFYYIDSERYSVVPKLVWQCRDHRQYRGTCASKEEAFEAFKSVLKELKRKVPVQTCDTCGLTNPKMEAQLTCPECLTEPTTNK*
Ga0098055_13655042	3300006793	Marine	MNALERSDMSVTEYLTDHNGNRVAFFYYIDSERYRTCPQLVWKCRDYPTFSGTCASKEEAFEAFKSVLKELKKGKACDKCGLTSPKMEAQDTCPECLTEPTTNK*
Ga0070749_100177013	3300006802	Aqueous	MSVTEYLTDHNGNRVAFFYYIDSERYRTCPQLVWKCRDYPNFKGTCASKEEAFEAFKAVLKELKRSVPVQTCDKCGLTSPKMEGQSTCPECLTETTTNK*
Ga0070749_100394149	3300006802	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERYSVAPKLVWQCRDHRQYKGTCASKSEFIECAKTVLKELKKKVPVCKECGLTSPKMEAQLTCPQCLITEK*
Ga0070749_101153991	3300006802	Aqueous	MSVTEYLTDHNGNQVAFFYYIDSERYSAVPKLVWKCKQHPEYSGTCASKSEFRECAKAVLKELKKAKPCDTCGLTSQKLEAQSTCPECLIDE*
Ga0070749_101490111	3300006802	Aqueous	MSVTEYLTDHNGNRVAFFYYIDSERYRTCPQLVWKCRDYPSFKGTCASKEEAFEAFKDVLKELKRKVPVCKECGLTSQKFESQDTCPDCLTDE*
Ga0070749_101618733	3300006802	Aqueous	MSVTEYLTDHNGNRIAFFYYIDSERYSVAPKLVWQCRDYRQYKGTCASKEEAFEAFKSVLKELKKKVPVCKECGLTNYKMEGQSTCPECLTDE*
Ga0070749_102473732	3300006802	Aqueous	LSVTEYLTDHTGRKIAFFYYIDSERYRTCPQLVWKCRDYPAFSGTCASKEEAFEAFKGVLKELKRKVPVQTCDTCGLTSPKMEAQLTCPDCLTDE*
Ga0070749_104276683	3300006802	Aqueous	VSVTEYLTDHNGNRIAFFYYIDSERYSVAPKLVWQCRDHRQYRGTCASKEEAFEAFKAVLKELKKKVPVCKECGLTSPKMEAQSTCPQCLITDK
Ga0070749_107308602	3300006802	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERYSVAPKLVWQCRDYRQYSGTCASKEEAFEAFKDVLKELKKKVPSQTCDTCGLTSPKMEA
Ga0070754_1001733610	3300006810	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERFRTCQQLVWKCRDYPSFNGTCASKAEFIECAKAVLKELKKVPVCKECGLTSQKFEAQDTCPDCLTDE*
Ga0070754_100211887	3300006810	Aqueous	MSVTEYLTDHNGNQVAFFYYIDSERYSAVPKLVWKCKQHPEYSGSCASKSEFIECAKQVLKELKKVPVCKECGLTSQKFEAQDTCPSCLTDE*
Ga0070754_100890924	3300006810	Aqueous	MSVTEYLTDHNGNQVAFFYYIDSERFRTCPQIVWKCRDYPAFSGTCASKSEFIEQCKFVLKEIKKKVPVRACDSCGLTSPKLEAQDACPECLIDE*
Ga0070754_101023434	3300006810	Aqueous	VSVTEYLTDHTGRKIAFFYYIDSERYRTCPQLVWKCRDYPSFKGTCASKAEFVECAKQVLKELKKNRSLPVCNTCGLTSPKMEAQDTCPDCLTDE*
Ga0070754_101417861	3300006810	Aqueous	VSVTEYLTDHTGRKIAFFYYIDSERYRTCPQLVWKCRDYPNFSGTCASKEESFEAFKAVLKELKKVPVHACDTCGLTSPKMEAQDTCPECLSNLGE*
Ga0070754_103532843	3300006810	Aqueous	VSVTEYLTDHTGRKIAFFYYIDSERYSVAPKLVWQCRDHRQYKGTCASKEEAFEAFKAVLKELKRKVPVHACDNELLMSEASNGVKSEAKPCD
Ga0070754_103568282	3300006810	Aqueous	MSVTEYLTDHNGNRVAFFYYIDSERYRTCPQLVWKCRDYPAFSGTCASKEEAFEAFKSVLKELKRKVPVHACDTCGLTSTKMEAQLTCPDCLTDE*
Ga0070754_103656732	3300006810	Aqueous	MSVTEYLTDHNGNRVAFFYYIDSERYSTVPRLVWQCRDYRQYRGSCASKEEAFEAFKAVLKELKRKVPVHACDNELLMSEASNGVKSEAKPCDKCGLTNYKMEGQSTCPECLTEPTTNK*
Ga0070754_103712582	3300006810	Aqueous	MSVTEYLTDHTGRKIAFFYYIESERYSVAPKLVWRCRDYPSFKGTCASKEEAFEAFKAVLKELKKVPVHACDTCGLTSTKMESQDTCPECLSNLGE*
Ga0070754_104705821	3300006810	Aqueous	MSVTEYLTDHNGNRIAFFYYIDSERYRTCPQLVWKCRDYPNFSGTCASKEEAFEAFKSVLKELKRKVPACKECGLTSNKFESQDTCPDCLIDE*
Ga0075476_101666601	3300006867	Aqueous	NGNQIAFFYYIDSERYSVAPKLVWQCRDYPSFKGTCASKEEAFEAFKSVMKELNKISQNNRSTCEKIPCDTCGLTSPKMESQDTCSECLTEPTTNK*
Ga0075476_102926612	3300006867	Aqueous	MSVTEYLTDHNGNRVAFFYYIESERYSVVPKLVWQCRDHRQYKGTCASKEEAFEAFKAVLKELKRKVPVHACDNELLMSEASNGVKSEAKPCDKCGLTNYKMEGQSTCPECLTEPTTNK*
Ga0075481_100206072	3300006868	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERYSAVPKLVWKCRQHPEYSGSCASKSEFIECAKAVLKELKKNRSLPVCDDELLMSEASNGVKSESKTCDNCGLTSQKFEAQDTCPDCLTDE*
Ga0070750_100498047	3300006916	Aqueous	VSVTEYLTDHTGRKIAFFYYIDSERYRTCPQLVWKCRDYPNFSGTCASKEEAFEAFKAVLKELKRKPTKTCDTCGLTSPKMEAQ
Ga0070750_100942163	3300006916	Aqueous	MSVTEYLTDHNGNRIAFFYYIDSERYSAVPKLVWKCRQHPEYSGTCASKAEFIECAKAVLKELKKKVPVHTCDNELLMSEASNGVKSEAKPCDTCGLTSPKMEAQSTCPQCLITDKY*
Ga0070750_102096674	3300006916	Aqueous	MSVTEYLTDHNGNRVAFFYYIESERYSVVPKLVWQCRDHRQYKGTCASKEEAFEAFKGVLKELKKVPVCDDCGLTNYKMEGQSTCPDCLITDE*
Ga0070750_102886172	3300006916	Aqueous	MSVTEYLTDHNGNQVAFFYYIDSERYSAVPKLVWKCRDHRQYRGTCASKEEAFEAFKAVLKELKRKVPVHACDTCGLTNPKMESQSTCPQCLIND*
Ga0070750_103839872	3300006916	Aqueous	VSVTEYLTDHNGNRIAFFYYIDSERFSVAPKLVWQCRDYPSFKGTCASKEEAFEAFKSVLKELKRKVPVCKDELLMSEASNSVRSEAKPCDNCGLTSPKMESQLTCPQCLITEK*
Ga0070746_101867921	3300006919	Aqueous	VSVTEYLTDHNGNRIAFFYYIDSERYSVAPKLVWQCRDHRQYRGTCASKEEAFEAFKAVLKELKKKVPVCKECGLTSPKMEAQSTCPQCLITDKY*
Ga0070746_103102751	3300006919	Aqueous	VSVTEYLTDHTGRKIVFFYYIDSERYRTCPQLVWKCRDYPAFSGTCASKEEAFEAFKSVLKELKKKAKTCDTCGLTSPKMESQLTCPSCLTEPTTNK*
Ga0070746_103868942	3300006919	Aqueous	VSVTEYLTDHTGRKIAFFYYIDSERYSTVPRLVWQCRDHRQYKGTCASKSEFIECAKAVLKELKKVPVCKECGLTNSKMESQDTCPSCLTETTTNK*
Ga0070746_104234591	3300006919	Aqueous	VSVTEYLTDHNGNRIAFFYYIDSERFSVAPKLVWQCRDYPSFKGTCASKEEAFEAFKSVLKELKRKVPVCKDELLMSEASNGVKSEAKPCDT
Ga0070746_104703041	3300006919	Aqueous	MSVTEYLTDHNGNRVAFFYYIDSERYRTCPQLVWKCRDYPNFKGTCASKEEAFEAFKAVLKELKRSVPVQTCDKCGLTSPKME
Ga0070745_10310343	3300007344	Aqueous	MSVTEYLTDHNGNQIAFFYYIDSERYSVAPKLVWQCRDYPSFKGTCASKEEAFEAFKSVMKELNKISQNNRSTCEKIPCDTCGLTSPKMESQDTCSECLTEPTTNK*
Ga0070745_10670554	3300007344	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERYSAVPKLVWKCRQHPEYSGSCASKSEFIECAKAELKELKKNRSLPVCDDELLMSEASNGVKSESKTCDNCGLTSQKFEAQDTCPDCLTDE*
Ga0070745_11832203	3300007344	Aqueous	MSVTEYLTDHNGNRIAFFYYIDSERYRTCPQLVWKCRDYPSFSGTCASKEEAFEAFKSVLKELKKVPVHACDNELLMSEASNGVKSEAKPCDTCGLTSTKMESQDTCPECLSNLGE*
Ga0070745_13043202	3300007344	Aqueous	MSVTEYLTDHNGNRVAFFYYIDSERYRTCPQLVWKCRDYPAFSGTCASKEEAFEAFKAVLKELKKNRSLPVCDDCGLTNYKMEGQSTCPECLTEPTTNK*
Ga0070752_10746995	3300007345	Aqueous	MSVTEYLTDHNGNRIAFFYYIESERYSAVPKLVWKCRQHPEYSGSCASKSEFIECAKQVLKELKKNRSLPVCDTCGLTNPKMEAQSTCPECLTEPTTNK*
Ga0070753_10201058	3300007346	Aqueous	MSVTEYLTDHNGNRIAFFYYIDSERYSAVPKLVWKCRQHPEYSGSCASKSEFIECAKQVLKELKKNRSLPVCDTCGLTNPKME
Ga0070753_10735841	3300007346	Aqueous	MSVTIYLTDHNGNRVAFFYYIENERYLTAPQLVWQCRDHRQYKGSCASKAEFIECAKAVLKELKKRKTCDVCGLTSQKFEAQDTCPDCLTDE*
Ga0070753_12229203	3300007346	Aqueous	MSVTEYLTDHNGNRIAFFYYIDSERYSVAPKLVWQCRDYPNFRGTCASKEEAFEAFKSVMKELNKISQNNRSICEKIPCDTCGLTSPKMEAQLTCPDCLINDQ*
Ga0099849_10419395	3300007539	Aqueous	MSVTEYLTDHNGNRVAFFYYIDSERYSVAPKLVWQCRDYPNFSGTCASKEEAFEAFKSVLKELKKKAKTCDTCGLTSPKMEAQLTCPDCLTETTTNK*
Ga0099849_11739492	3300007539	Aqueous	MSVTEYLTDHNGNRIAFFYYIDSERYSAVPKLVWKCRQHPEYSGTCASKAEFIECAKAVLKELKKVPVCKECGLTSPKMEAQLTCPQCLINDQ*
Ga0070751_10870643	3300007640	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERYRTCPQLVWKCRDYPSFKGTCASKAEFIECAKQVLKELKKNRSLPVCDDCGLTNPKMEGQSTCPDCLTDE*
Ga0070751_11293833	3300007640	Aqueous	MSVTEYLTDHNGNQVAFFYYIDSERYSVAPKLVWQCRDYRQYKGTCASKEEAFEAFKAVLKELKKKVPVHACDTCGLTGQKFESQDTCPDCLITDE*
Ga0070751_12531282	3300007640	Aqueous	VSVTEYLTDHNGNRIAFFYYIDSERYSVAPKLVWRCRDYPSFKGTCASKEEAFEAFKSVMKELNKISQNNRSICEKIPCDTCGLTSPKMEAQLTCPECLTETDTNK*
Ga0075480_100359172	3300008012	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERYSTVPRLVWQCRDHRQYKGTCASKSEFIECAKAVLKELKKNRSLPVCDDELLMSEASNGVKSESKTCDNCGLTSQKFEAQDTCPDCLTDE*
Ga0075480_100789831	3300008012	Aqueous	MSVTEYLTDHNGNRIAFFYYIDSERYSTVPRLVWQCRDYRQYRGSCASKEEAFEAFKAVLKELKRKVPVHACDTCGLTSPKMEAQDTCPECLSNLGE*
Ga0098049_11395673	3300010149	Marine	MSVTEYLTDHNGNRVAFFYYIDSERYRTCPQLVWKCRDYPTFSGTCASKEEAFEAFKSVLKELKKGKACDKCGLTSPKMEAQDTCPECLTEPTTN
Ga0098049_12014922	3300010149	Marine	MSVTEYLTDHNGNRVAFFYYIDSERYSVVPKLVWQCRDHRQYRGTCASKEEAFEAFKSVLKELKRKVPVQTCDTCGLTNPKMEAQLTCPECLTEPTTNK*
Ga0129348_10802362	3300010296	Freshwater To Marine Saline Gradient	MSVTEYLTDHNGNRIAFFYYIDSERYSVAPKLVWQCRDHRQYKGTCASKEEAFEAFKGVLKELKKKVPVHGVKSEAKPCDTCGLTNPKMEAQDTCPECLITETTTNK*
Ga0129345_10890794	3300010297	Freshwater To Marine Saline Gradient	MSVTEYLTDHTGRKIAFFYYIDSERYSAVPKLVWKCRQHPEYSGTCASKAEFIECAKAVLKELKKVPVCKECGLTSPKMEAQLTCPQCLINDQ*
Ga0182092_13761701	3300016734	Salt Marsh	RKIAFFYYIDSERYSVAPKLVWQCRDHRQYSGTCASKEEAFEAFKAVLKELKKKVPSQTCDTCGLTSPKMEAQDTCPDCLTDE
Ga0181607_100935394	3300017950	Salt Marsh	MSVTEYLTDHTGRKIAFFYYIDSERYSVAPKLVWQCRDHRQYSGTCASKEEAFEAFKAVLKELKKKVPSQTCDTCGLTSPKMEAQDTCPDCLTDE
Ga0181577_107757182	3300017951	Salt Marsh	MSLTEYLTDHTGRKIAFFYYIDSERYRTCPQLVWKCRDYPSFNGTCASKSEFIECAKAVLKELKKVPVCKECGLTSQKFESQ
Ga0181576_104507972	3300017985	Salt Marsh	FKHMSVTEYLTDHNGNQVAFFYYIDSERYSVAPKLVWQCRDHQQYKGTCASKEEAFEAFKDVLKELKRKVPVQTCDTCGLTSPKMESQSTCPECLLTEK
Ga0181569_102706315	3300017986	Salt Marsh	MSVTEYLTDHTGRKIAFFYYIDSERYSVAPKLVWQCRDHRQYSGTCASREEAFEAFKDVLKELKRKVPVQTCDTCGLTSPKMESQSTCPECLLTEK
Ga0181568_101223105	3300018428	Salt Marsh	MSVTEYLTDHTGRKIAFFYYIDSERYSVAPKLVWQCRDHQQYKGTCASKEEAFEAFKDVLKELKRKVPVQTCDTCGLTSPKMESQSTCPECLLTEK
Ga0194029_10056902	3300019751	Freshwater	VLERSDMSVTEYLTDHNGNQIAFFYYIDSERYRTCPQLVWKCRDYPSFSGTCASKEEAFEAFKSVLKELKRKVPVCKDELLMSEASNGVKSEAKPCDTCGLTNYKMEGQSTCPDCLTETTTNK
Ga0194029_10815862	3300019751	Freshwater	MSVTEYLTDHNGNRVAFFYYIDSERYRTCPQLVWKCRDYPSFSGTCASKEEAFEAFKAVLKELKKNRSLPVCDDCGLTNYKMEGQSTCPDCLTETSTNK
Ga0194023_10525994	3300019756	Freshwater	MSVTEYLTDHTGREIAFFYYIDSERYSAVPKLVWKCRQHPEYSGTCASKSEFIECAKAVLKELKKNRSLPVCDDCGLTSPKMEAQ
Ga0181605_103411081	3300020188	Salt Marsh	MSVTEYLTDHTGRKIAFFYYIDSERYSVAPKLVWQCRDYRQYSGTCASKEEAFEAFKDVLKELKKKVPSQPCDTCGLTSPKMEAQDTCPDCLTDE
Ga0181604_101904304	3300020191	Salt Marsh	ALERSDMSVTEYLTDHTGRKIAFFYYIDSERYSVAPKLVWQCRDHRQYSGTCASKEEAFEAFKAVLKELKKKVPSQTCDTCGLTSPKMEAQDTCPDCLTDE
Ga0211558_1000130416	3300020439	Marine	MSVTEYLTDHNGNQVAFFYYIDSERFRTCPQLVWQCRDYPNFSGTCASKSEFIECAKQVLKELKKVPVCKDCGLTSAKMEAQSTCPDCLTETNTNK
Ga0196883_10009445	3300022050	Aqueous	MSVTEYLTDHNGNQVAFFYYIDSERYSAVPKLVWKCKQHPEYSGSCASKSEFIECAKQVLKELKKVPVCKECGLTSQKFEAQDTCPSCLTDE
Ga0212025_10832131	3300022057	Aqueous	MSVTEYLTDHNGNQVAFFYYIDSERFRTCPQIVWKCRDYPAFSGTCASKSEFIEQCKFVLKEIKKKVPVRACDSCGLTSPKLEAQDACPECLIDE
Ga0212021_10694073	3300022068	Aqueous	MSVTEYLTDHNGNRIAFFYYIDSERYSAVPKLVWKCRQHPEYSGTCASKAEFIECAKAVLKELKKKVPVHTCDNELLMSEASNGVKSEAKPCDTCGLTSPKMEAQSTCPQCLITDKY
Ga0196897_10490532	3300022158	Aqueous	MSVTEYLTDHNGNRVAFFYYIDSERYSTVPRLVWQCRDYRQYRGSCASKEEAFEAFKAVLKELKRKVPVHACDNELLMSEASNGVKSEAKPCDKCGLTNYKMEGQSTCPECLTEPT
Ga0196891_10062096	3300022183	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERYSVAPKLVWQCRDHRQYKGTCASKSEFIECAKTVLKELKKKVPVCKECGLTSPKMEAQLTCPQCLITEK
Ga0196899_10077828	3300022187	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERYSAVPKLVWKCRQHPEYSGSCASKSEFIECAKAVLKELKKNRSLPVCDDELLMSEASNGVKSESKTCDNCGLTSQKFEAQDTCPDCLTDE
Ga0196899_10247206	3300022187	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERFRTCQQLVWKCRDYPSFNGTCASKAEFIECAKAVLKELKKVPVCKECGLTSQKFEAQDTCPDCLTDE
Ga0196899_10698661	3300022187	Aqueous	MSVTEYLTDHNGNRVAFFYYIDSERYRTCPQLVWKCRDYPAFSGTCASKEEAFEAFKSVLKELKRKVPVHACDTCGLTSTKMEAQLTCPD
Ga0196899_10701462	3300022187	Aqueous	VSVTEYLTDHTGRKIAFFYYIDSERYRTCPQLVWKCRDYPSFKGTCASKAEFVECAKQVLKELKKNRSLPVCNTCGLTSPKMEAQDTCPDCLTDE
Ga0196899_10781283	3300022187	Aqueous	MSVTEYLTDHNGNRVAFFYYIDSERYSTVPRLVWQCRDYRQYRGSCASKEEAFEAFKAVLKELKRKVPVHACDNELLMSEASNGVKSEAKPCDKCGLTNYKMEGQSTCPECLTEPTTNK
Ga0208793_10275704	3300025108	Marine	MNALERSDMSVTEYLTDHNGNRVAFFYYIDSERYSVVPKLVWQCRDHRQYRGTCASKEEAFEAFKSVLKELKRKVPVQTCDTCGLTNPKMEAQLTCPECLTEPTTNK
Ga0208898_10061128	3300025671	Aqueous	MSVTEYLTDHNGNRIAFFYYIESERYSAVPKLVWKCRQHPEYSGSCASKSEFIECAKQVLKELKKNRSLPVCDTCGLTNPKMEAQSTCPECLTEPTTNK
Ga0208898_10120446	3300025671	Aqueous	MSVTEYLTDHNGNQIAFFYYIDSERYSVAPKLVWQCRDYPSFKGTCASKEEAFEAFKSVMKELNKISQNNRSTCEKIPCDTCGLTSPKMESQDTCSECLTEPTTNK
Ga0208898_10135266	3300025671	Aqueous	MSVTEYLTDHTGRKIAFFYYIESERYSVAPKLVWRCRDYPSFKGTCASKEEAFEAFKAVLKELKKVPVHACDTCGLTSTKMESQDTCPECLSNLGE
Ga0208898_10389324	3300025671	Aqueous	VSVTEYLTDHTGRKIAFFYYIDSERYRTCPQLVWKCRDYPNFSGTCASKEESFEAFKAVLKELKKVPVHACDTCGLTSPKMEAQDTCPECLSNLGE
Ga0208898_10666452	3300025671	Aqueous	MSVTEYLTDHNGNRVAFFYYIESERYSVVPKLVWQCRDHRQYKGTCASKEEAFEAFKAVLKELKRKVPVHACDNELLMSEASNGVKSEAKPCDKCGLTNYKMEGQSTCPECLTEPTTNK
Ga0208898_10847001	3300025671	Aqueous	MSVTEYLTDHNGNRIAFFYYIDSERYRTCPQLVWKCRDYPSFSGTCASKEEAFEAFKSVLKELKKVPVHACDNELLMSEASNGVKSEAKPCDTCGLTSTKMESQDTCPECLSNLGE
Ga0208162_10134443	3300025674	Aqueous	MSVTEYLTDHNGNRVAFFYYIDSERYSVAPKLVWQCRDYPNFSGTCASKEEAFEAFKSVLKELKKKAKTCDTCGLTSPKMEAQLTCPDCLTETTTNK
Ga0208899_100993010	3300025759	Aqueous	LSVTEYLTDHTGRKIAFFYYIDSERYRTCPQLVWKCRDYPAFSGTCASKEEAFEAFKGVLKELKRKVPVQTCDTCGLTSPKMEAQLTCPDCLTDE
Ga0208899_11002145	3300025759	Aqueous	AFFYYIESERYSVVPKLVWQCRDHRQYKGTCASKEEAFEAFKGVLKELKKVPVCDDCGLTNYKMEGQSTCPDCLITDE
Ga0208899_11219681	3300025759	Aqueous	EYLTDHTGRKIAFFYYIDSERYSAVPKLVWKCRQHPEYSGSCASKSEFIECAKAVLKELKKNRSLPVCDDELLMSEASNGVKSESKTCDNCGLTSQKFEAQDTCPDCLTDE
Ga0208767_10637685	3300025769	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERYSAVPKLVWKCRQHPEYSGSCASKSEFIECAKAVLKELKKNRSLPVCDDELLMSEASNGVKSESKTCDNCGLTSQKFEAQDTCPDCLTETTTNK
Ga0208543_10813782	3300025810	Aqueous	LSVTEYLTDHTGRKIAFFYYIDSERYSVAPKLVWQCRDHRQYKGTCASKSEFIECAKTVLKELKKKVPVCKECGLTSPKMEAQLTCPQCLITEK
Ga0208785_10406831	3300025815	Aqueous	VTEYLTDHNGNQVAFFYYIDSERYSAVPKLVWKCKQHPEYSGSCASKSEFIECAKQVLKELKKVPVCKECGLTSQKFEAQDTCPSCLTDE
Ga0208547_10663911	3300025828	Aqueous	NGNQIAFFYYIDSERYSVAPKLVWQCRDYPSFKGTCASKEEAFEAFKSVMKELNKISQNNRSTCEKIPCDTCGLTSPKMESQDTCSECLTEPTTNK
Ga0208645_10187678	3300025853	Aqueous	MSVTEYLTDHNGNRIAFFYYIESERYSAVPKLVWKCRQHPEYSGSCASKSEFIECAKQVLKELKKNRSLPVCDTCGLTNPKMEGQSTCPDCMIEPTTNK
Ga0208645_12491051	3300025853	Aqueous	VSVTEYLTDHTGRKIAFFYYIDSERYSVAPKLVWQCRDHRQYKGTCASKEEAFEAFKAVLKELKRKVPVHACDNELLMSEASNGVKSEAKPCDTCG
Ga0208645_12597032	3300025853	Aqueous	MSVTEYLTDHNGNRIAFFYYIDSERYRTCPQLVWKCRDYPNFSGTCASKEEAFEAFKSVLKELKRKVPACKECGLTSNKFESQDTCPDCLIDE
Ga0209534_101739614	3300025880	Pelagic Marine	MSVTEYLTDHNGNQVAFFYYIDSERYRTCPQLVWKCRDYPAFSGTCASKSEFIEQCKSVLKEIKKKVPVRVCKDCGLTSAKMEAQSTCPECITEPNTNK
Ga0208644_10889286	3300025889	Aqueous	MSVTEYLTDHNGNQVAFFYYIDSERYSAVPKLVWKCKQHPEYSGTCASKSEFRECAKAVLKELKKAKPCDTCGLTSQKLEAQSTCPECLIDE
Ga0208644_11173321	3300025889	Aqueous	MSVTEYLTDHNGNRVAFFYYIDSERYRTCPQLVWKCRDYPSFKGTCASKEEAFEAFKDVLKELKRKVPVCKECGLTSQKFESQDT
Ga0208644_11209193	3300025889	Aqueous	MSVTEYLTDHNGNQVAFFYYIDSERFRTCPQIVWKCRDYPAFSGTCASKSEFIEQCKSVLKEIKKKVPVRACKDCGLTSPKMEAQSTCPDCLIDE
Ga0208644_11332633	3300025889	Aqueous	MSVTEYLTDHNGNRIAFFYYIDSERYSVAPKLVWQCRDYRQYKGTCASKEEAFEAFKSVLKELKKKVPVCKECGLTNYKMEGQSTCPECLTDE
Ga0348335_066844_203_493	3300034374	Aqueous	MSVTEYLTDHTGRKIAFFYYIDSERYRTCPQLVWKCRDYPNFSGTCASKEESFEAFKAVLKELKKVPVHACDTCGLTSPKMEAQDTCPECLSNLGE
Ga0348337_011688_4348_4638	3300034418	Aqueous	MSVTEYLTDHNGNQVAFFYYIDSERYSVAPKLVWQCRDYRQYKGTCASKEEAFEAFKAVLKELKKKVPVHACDTCGLTGQKFESQDTCPDCLITDE
Ga0348337_021781_2614_2973	3300034418	Aqueous	MSVTEYLTDHNGNRVAFFYYIDSERYSVVPKLVWQCRDHRQYKGTCASKEEAFEAFKAVLKELKRKVPVHACDNELLMSEASNGVKSEAKPCDKCGLTNYKMEGQSTCPECLTEPTTNK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091843

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences