Metagenome / Metatranscriptome Family F091817

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091817
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	63 residues
Representative Sequence	MAEERRRRRLRPARPLYGYRDIGAAGARHGRRATYRAWAILALMIVLYLAIMLTIYFVEPGLR
Number of Associated Samples	71
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.85 %
% of genes near scaffold ends (potentially truncated)	15.89 %
% of genes from short scaffolds (< 2000 bps)	91.59 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (32.710 % of family members)
Environment Ontology (ENVO)	Unclassified (28.037 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.598 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.46% β-sheet: 0.00% Coil/Unstructured: 61.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00115	COX1	15.89
PF00072	Response_reg	0.93
PF01040	UbiA	0.93
PF16327	CcmF_C	0.93
PF13442	Cytochrome_CBB3	0.93
PF00171	Aldedh	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.93
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.93
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	77.57 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	77.57 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.87 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.87 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118804235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300002568\|C688J35102_120927084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2439	Open in IMG/M
3300002568\|C688J35102_120935369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2566	Open in IMG/M
3300003990\|Ga0055455_10061382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1050	Open in IMG/M
3300003990\|Ga0055455_10131483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	756	Open in IMG/M
3300003990\|Ga0055455_10262482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300004006\|Ga0055453_10000427	All Organisms → cellular organisms → Bacteria	7179	Open in IMG/M
3300004006\|Ga0055453_10183525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300004006\|Ga0055453_10239052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300004081\|Ga0063454_100302616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1002	Open in IMG/M
3300004114\|Ga0062593_101530310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300004157\|Ga0062590_101333645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300005045\|Ga0071328_127871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3398	Open in IMG/M
3300005175\|Ga0066673_10499648	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005175\|Ga0066673_10733724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300005187\|Ga0066675_11416580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300005329\|Ga0070683_102093940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300005366\|Ga0070659_101003101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300005454\|Ga0066687_10247323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	993	Open in IMG/M
3300005535\|Ga0070684_100466175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1168	Open in IMG/M
3300005562\|Ga0058697_10393445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	685	Open in IMG/M
3300005568\|Ga0066703_10828806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300005884\|Ga0075291_1021762	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005888\|Ga0075289_1082429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300006031\|Ga0066651_10393695	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300006034\|Ga0066656_10896516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300006046\|Ga0066652_100002945	All Organisms → cellular organisms → Bacteria	9521	Open in IMG/M
3300006046\|Ga0066652_100048187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3190	Open in IMG/M
3300006046\|Ga0066652_101375209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300006755\|Ga0079222_10965524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	726	Open in IMG/M
3300009137\|Ga0066709_103781636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300010147\|Ga0126319_1308995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	987	Open in IMG/M
3300010147\|Ga0126319_1340248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300010147\|Ga0126319_1481699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1906	Open in IMG/M
3300011003\|Ga0138514_100009121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1577	Open in IMG/M
3300011003\|Ga0138514_100024325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1109	Open in IMG/M
3300011003\|Ga0138514_100108333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300012198\|Ga0137364_10985800	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300012200\|Ga0137382_10393231	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300012204\|Ga0137374_10001431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27158	Open in IMG/M
3300012204\|Ga0137374_10507079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	936	Open in IMG/M
3300012208\|Ga0137376_10303361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1386	Open in IMG/M
3300012212\|Ga0150985_113253626	Not Available	515	Open in IMG/M
3300012350\|Ga0137372_10394539	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300012355\|Ga0137369_10383992	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300012355\|Ga0137369_10516598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	842	Open in IMG/M
3300012358\|Ga0137368_10262964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1186	Open in IMG/M
3300012532\|Ga0137373_10196441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1665	Open in IMG/M
3300012918\|Ga0137396_11137123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300012955\|Ga0164298_10523989	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300012986\|Ga0164304_10260952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1167	Open in IMG/M
3300012988\|Ga0164306_10870266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300018061\|Ga0184619_10072296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1525	Open in IMG/M
3300018061\|Ga0184619_10276155	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300018071\|Ga0184618_10162279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	919	Open in IMG/M
3300018071\|Ga0184618_10174001	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300018429\|Ga0190272_10554337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	994	Open in IMG/M
3300018433\|Ga0066667_11786274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300018482\|Ga0066669_10759956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	856	Open in IMG/M
3300019865\|Ga0193748_1004371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1133	Open in IMG/M
3300020140\|Ga0179590_1033688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1270	Open in IMG/M
3300021078\|Ga0210381_10223098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300021080\|Ga0210382_10083515	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300021080\|Ga0210382_10132380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300021363\|Ga0193699_10044938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1693	Open in IMG/M
3300021363\|Ga0193699_10170125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	900	Open in IMG/M
3300025556\|Ga0210120_1001435	All Organisms → cellular organisms → Bacteria	5535	Open in IMG/M
3300025556\|Ga0210120_1099579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300025925\|Ga0207650_11855167	Not Available	509	Open in IMG/M
3300026004\|Ga0208416_1010513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	713	Open in IMG/M
3300028705\|Ga0307276_10023714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1224	Open in IMG/M
3300028705\|Ga0307276_10059184	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300028705\|Ga0307276_10077843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	775	Open in IMG/M
3300028707\|Ga0307291_1142898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300028709\|Ga0307279_10119460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300028713\|Ga0307303_10079897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300028721\|Ga0307315_10303172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300028755\|Ga0307316_10184060	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300028755\|Ga0307316_10285548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300028768\|Ga0307280_10218284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	678	Open in IMG/M
3300028784\|Ga0307282_10145087	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300028784\|Ga0307282_10303455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
3300028784\|Ga0307282_10416374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300028784\|Ga0307282_10527286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300028796\|Ga0307287_10270951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300028799\|Ga0307284_10183937	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300028799\|Ga0307284_10355861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300028828\|Ga0307312_10216620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1233	Open in IMG/M
3300028828\|Ga0307312_10383419	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300028828\|Ga0307312_10591202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300028828\|Ga0307312_10830791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300028881\|Ga0307277_10238259	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300028881\|Ga0307277_10567570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300028884\|Ga0307308_10110871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1308	Open in IMG/M
3300028884\|Ga0307308_10217047	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300031152\|Ga0307501_10213545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300031421\|Ga0308194_10062120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	987	Open in IMG/M
3300031421\|Ga0308194_10245765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300031473\|Ga0272434_1015308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7315	Open in IMG/M
3300031938\|Ga0308175_101875327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	672	Open in IMG/M
3300031938\|Ga0308175_101930122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300031938\|Ga0308175_102396620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300031996\|Ga0308176_10740399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1023	Open in IMG/M
3300031996\|Ga0308176_11423406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	738	Open in IMG/M
3300032159\|Ga0268251_10254722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300034268\|Ga0372943_0841685	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300034384\|Ga0372946_0240193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.33%
Host-Associated	Host-Associated	4.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.50%
Aquatic	Environmental → Aquatic	16.82%
Plants	Host-Associated → Plants	4.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.77%
Marine	Environmental → Aquatic → Marine	7.48%
Freshwater	Environmental → Aquatic → Freshwater	5.61%
Sediment	Environmental → Aquatic → Sediment	3.74%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.87%
Phylloplane	Host-Associated → Plants → Phylloplane	1.87%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.49%
Wetlands	Environmental → Aquatic → Marine → Wetlands	7.48%
Loam	Environmental → Terrestrial → Soil → Loam	7.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.80%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.28%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	7.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	32.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.21%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.80%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.80%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.80%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.87%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.93%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019865	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300025556	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026004	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302 (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031473	Rock endolithic microbial communities from Victoria Land, Antarctica - Trio Nunatak nord	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1188042352	3300002568	Soil	MADETPNARGRFRPARALYGYRDIGAPGARHTRQAVVRAWLILALMIVLYLAIVLTIYFIEPGLR*
C688J35102_1209270842	3300002568	Soil	MARERRRRRLTPARPLYGYRDIGAAAGARHSRRAVIRAWLILAMMILFYVAIVLTIYFVEPGLR*
C688J35102_1209353692	3300002568	Soil	MAEDHHERRLLRPARPLYGYRDIGAAGARDSRRAKIRAWVILAVMIVIYLAIVLTIYFVEPGLR*
Ga0055455_100613824	3300003990	Natural And Restored Wetlands	MAGERRRRLRPARPLYGYRDIGAAAGARHSRRAVIRAWLILALMILLYAAVVLTIYFVEPGLR*
Ga0055455_101314831	3300003990	Natural And Restored Wetlands	MAGEGGGRRSLRPARPLYGYRDIGGAGARHTRRASVRAWVILAALIVLYLAIMLTIYFVEPGLR*
Ga0055455_102624822	3300003990	Natural And Restored Wetlands	MADERRWNRLRPARPLSGYRDIGAAAGARHSRRAVTRAWLILALMILLYVAVVLTIYFVEPGLR
Ga0055453_100004276	3300004006	Natural And Restored Wetlands	MRPARPLYGYRDVGADVRHGKRATYRAWVILTVMIVLYLAIMLTIYFVEPGLR*
Ga0055453_101835251	3300004006	Natural And Restored Wetlands	MAEDKQRRRLRPARPLYGYRDTGAPEVRHTRRAVTRAWVILAVLIVIYLAIMLTIYFVEPGLR*
Ga0055453_102390522	3300004006	Natural And Restored Wetlands	MPEDRQGLRLRPARPLYGYRDIGAAGARHTKAASYRAWAILAVMIVLYLAIMLTIYFVEPGLR*
Ga0063454_1003026162	3300004081	Soil	MPPERRRRRLRPARPLYGYRDTGAAAGARHSRRAVVRAWLILAVLLLLYAAVVLTIYFVEPGLR*
Ga0062593_1015303102	3300004114	Soil	MAEDSPEPPITPAQPLAGYRDIGAPASVRHTRRAVVRAWVILAGLIVLYLAAMLTIYFVEPGLR*
Ga0062590_1013336452	3300004157	Soil	MADDSPEPPITPAQPLAGYRDIGAPASVRHTRRAVVRAWVILAGLIVLYLAAMLTIYFVEPGLR*
Ga0071328_1278715	3300005045	Permafrost	MARRRRRLLPARPLVGYRDIGAPAGARHSRRATVRAWLILAVMIVLYLAVVLTIYFVEPGLR*
Ga0066673_104996481	3300005175	Soil	GVLMADESGQRRRRRLRPARPLYGYRDIGAAAGARHSRRAVVRAWLILAVLLLIYAAVVLTIYFVEPGLR*
Ga0066673_107337242	3300005175	Soil	MARRRRLRPARPLYGYRDIGAPAGARHSRQAVTRAWVILAVLILIYLGVVLTIYFVEPGLR*
Ga0066675_114165802	3300005187	Soil	GLRPARPLYGYRDIGAAAGARHSRRAVVRAWLILAVLLLLYAAVVLTIYFVEPGLR*
Ga0070683_1020939402	3300005329	Corn Rhizosphere	MAVERRRRRLRPGRPLYGYRDIGAAHVRHSRAATVRAWVILAVLIAVYLAVTLTIYFVEPGLR*
Ga0070659_1010031012	3300005366	Corn Rhizosphere	MAEEQLPRRRLRPARPLYGYLDIGAAAARHSRRAVVRAWVILAVLIILYFAVTLTIYFVEPGLR*
Ga0066687_102473233	3300005454	Soil	MAEDHHERRLLRPARPLYGYRDIGAAGARDSRRAKIRAWVILAVMIVLYLAIVLTIYFVEPGLR*
Ga0070684_1004661751	3300005535	Corn Rhizosphere	MAEDVPRRRRLRPARPLHGYRDIGAPGARHTPQAVTRAWVILAIMIVIYLAIMLTIYFLEPGLR*
Ga0058697_103934452	3300005562	Agave	MASEERHRRRIRGRPARPLYGYRDIGPAARHTRVAEIRAWVILALLIVLYLAVVLTIYFVEPGLR*
Ga0066703_108288061	3300005568	Soil	EEPRHGEDLLMAEEPQGRRRRLRPARPLYGYRDIGAAGARDSRRAKIRAWVILAVMIVLYLAIVLTIYFVEPGLR*
Ga0075291_10217621	3300005884	Rice Paddy Soil	HGEDLLMAEDKQRRRLRPARPLYGYRDTGAPEVRHTRRAVTRAWVILAVLIVIYLAIMLTIYFVEPGLR*
Ga0075289_10824291	3300005888	Rice Paddy Soil	MAAEPRRRRLRPGRPLYGYRDIGAEGARHSRRAVYRAWAILAVMIVVYLAIMLTIYFVEPGLRSRTVWVQELSSLTFLA
Ga0066651_103936952	3300006031	Soil	MAGDEPRRGRFRPARPLYGYRDIGAPGARHTRQAVVRAWVILAVMIVVYLAIVLTIYFVEPGLR*
Ga0066656_108965161	3300006034	Soil	GRAGEEHRYGEDLLMAEDHHERRLLRPARPLYGYRDIGAAGARDSRRAKIRAWVILAVMIVLYLAIVLTIYFVEPGLR*
Ga0066652_1000029455	3300006046	Soil	MADESGQRRRRRLRPARPLYGYRDIGAAAGARHSRRAVVRAWLILAVLLLIYAAVVLTIYFVEPGLR*
Ga0066652_1000481875	3300006046	Soil	MPEEERPLRPGRPLSGYRDVGGPPGRHSRRAVNRAWLILAVMIVLYLAVVLTIYFIEPGLR*
Ga0066652_1013752091	3300006046	Soil	MAEERQRRRLRPARPLYGYRDIGAAGGRHTRAASVRAWVILAVLIVIYLAVMLTIYFVEPGLR*
Ga0079222_109655242	3300006755	Agricultural Soil	MAERRWNRLRPARPLAGYRDIGAAAGARHTRRAVIRAWLILALMILLYLAVMLTIFFVEPGLR*
Ga0066709_1037816361	3300009137	Grasslands Soil	MSEPRRRRLGPGRSLYGYRDIGAPGARHGRRATVRAWVIVALMIVLYLAVMLTIYFVEPGLR*
Ga0126319_13089951	3300010147	Soil	MAEEKRPEPRPARPLYGYRDIGAAGARGGRRASNRAWAILAVMILVYLAVMLTIYFVEPGLR*
Ga0126319_13402482	3300010147	Soil	MVDETPEPPITPAQPLTGYRDIGPPASVRHTRRAVVRAWTILAGLIVLYLAVMLTIYFIEPGLR*
Ga0126319_14816995	3300010147	Soil	MPEEQESGTPRPARPLYGYRDIGAAGARYSRRATYRAWAILAALIVIYLAVMLTIYFVEPGLR*
Ga0138514_1000091212	3300011003	Soil	MAEERRRRRLLPARPLYGYRDIGAAGARHTRRASYRAWGILALMIVLYLAIMLTIYFVEPGLR*
Ga0138514_1000243252	3300011003	Soil	MAEQEQPEKRRRGLRPGRPLYGYRDTAEPPGGRHSRRAVVRAWLILAVMILLYLAVVLTIYGVEPGLR*
Ga0138514_1001083333	3300011003	Soil	MPEDRRGRRLRPARPLYGYRDIGAAGARYSRRATYRAWAILAVLIVLYLAIVLTIYFVEP
Ga0137364_109858002	3300012198	Vadose Zone Soil	MAERRRRLRPGRPLYGYRDLGTPDARHSRRAIYRAWVILAVMIVVYLAVVLTIYFIEPGLR*
Ga0137382_103932312	3300012200	Vadose Zone Soil	MAEERQRRWLRPARPLYGYRDLGAPRHSRRAVTRAWVILAVLIVIYLAIVLTIYFIEPGLR*
Ga0137374_1000143122	3300012204	Vadose Zone Soil	MAERRRLRPGRPLYGYRDAGAPDARHSRRAVYRAWVILAVMIVLYLAVALTIYFIEPGLR
Ga0137374_105070792	3300012204	Vadose Zone Soil	MPEDRQGRRLRPARPLYGYRDIGAAGARYSRRATYRAWAILAVLIVLYLAIVLTIYFVEPGLR*
Ga0137376_103033615	3300012208	Vadose Zone Soil	MAEEPRRRRLRPARPLYGYRDIGAAGARYNRRAMTRAWVILALLIVIYLAIVLTIYFIEPGLR*
Ga0150985_1132536262	3300012212	Avena Fatua Rhizosphere	MADEADETPITPAQPLTGYRDIGPPAGVRHTRQAVVRAWMILAGLIVLYLAAVLTIYFIEPGLR*
Ga0137372_103945392	3300012350	Vadose Zone Soil	MPEDRQGRRLRPARPLYGYRDIGAAGARYSRRATYRAWAILALLIVVYLAIMLTIYFVEPGLR*
Ga0137369_103839922	3300012355	Vadose Zone Soil	MAERRRLRPGRPLYGYRDAGAPDARHSRRAVYRAWVILAVLIVLYLAVALTIYFIEPGLR
Ga0137369_105165982	3300012355	Vadose Zone Soil	MAERRRLRPARPLYGYRDIGEAGARHTRRAVYRTWVILALLIVVYLAVVLTIYFVEPGLR
Ga0137368_102629642	3300012358	Vadose Zone Soil	MAERRRLRPARPLYGYRDVGEAGARHTRRAVYRTWAVLALLIVLYLAVVLTIYFVEPGLR
Ga0137373_101964411	3300012532	Vadose Zone Soil	MAEERPRRRLRPARPLYGYRDIGAAGARYSRRAVVRAWAVLAVLIVIYLAIVLTIYFVEP
Ga0137396_111371231	3300012918	Vadose Zone Soil	MAEQRRRRLRPGRPLSGYRDTGEPPGDRHSRRAVLRAWVILAVMILIYLAVMLTIYFVEPGLR*
Ga0164298_105239892	3300012955	Soil	MAGEQERGRRRRLRPARPLYGYRDIGAAGARHSRKAVVRAWLILAAMLLIYAAVMLTIYAVEPGLR*
Ga0164304_102609522	3300012986	Soil	MARERGRKLRPARPLYGYRDIGAAAGARHSRRAVIRAWLILALMILIYAGVVLTIYFVEPGLR*
Ga0164306_108702662	3300012988	Soil	MASDRPRRRLRVGRPLYGYRDIGAAGARHGRRATIRAWLILAVMIVVYLAVMLTIYFVEPGLR*
Ga0184619_100722962	3300018061	Groundwater Sediment	MAERRRRGLRPGRPLTGYRDIGAPDARHSRRAIYRAWLILAIMIVLYLAVVLTIYFIEPGLR
Ga0184619_102761552	3300018061	Groundwater Sediment	MAEERPRRRLRPARPLYGYRDIGAAGARHTRRATYRAWAILAVMIVVYLAIVLTIYFVEPGLR
Ga0184618_101622792	3300018071	Groundwater Sediment	MAERRRRGLRPGRPLSGYRDIGAPDARHSRRAIYRAWLILAIMIVLYLAVVLTIYFVEPGLR
Ga0184618_101740012	3300018071	Groundwater Sediment	MAEQPRRRLRPGRPLSGYRDTGEPPGDRHSRRAVVRAWMILAVMILLYLAVVLTIYGVEPGLR
Ga0190272_105543372	3300018429	Soil	MAEQRRRRRLRPGRPLYGYRDVGAPDARHSRRAVYRAWVILAVMIVLYLAVALTIYFIEPGLR
Ga0066667_117862742	3300018433	Grasslands Soil	MAEDHHERRLLRPARPLYGYRDIGAAGARDSRRAKIRAWVILAVMIVVYLAIVLTIYFVEPGLR
Ga0066669_107599561	3300018482	Grasslands Soil	AREESHDGEDLLMASPEGPRRRLRPARPLYGYRDTGAAGERYSRAATLRAWAILAVLIVIYLAIVLTIYFVEPGLR
Ga0193748_10043714	3300019865	Soil	MAERRRRLRLRPGRPLSGYRDVGAPDARHSRRAVYRAWVILAMMILLYMAVALTIYFIEPGLR
Ga0179590_10336882	3300020140	Vadose Zone Soil	MAEQGQRRIRPARPLYGYRDIGGAEVRHGKRATYRAWAILAVMIVIYLAIMLTIYFAEPGLR
Ga0210381_102230982	3300021078	Groundwater Sediment	MPEDRQGRRLRPARPLYGYRDIGAAGARYSRRAKYRAWAILALMIVVYLAIMLTIYFVEPGLR
Ga0210382_100835152	3300021080	Groundwater Sediment	MAEERRRRRLRPGRPLYGYRDIGAPGARHSRRAVTRAWVILALLIVIYLAIVLTIYFIEPGLR
Ga0210382_101323801	3300021080	Groundwater Sediment	MAEERQRRWLRAARPLYGYRDLGAPGARHSRRAVTRAWVILAVLIVIYLAIVLTIYFIEPGLR
Ga0193699_100449385	3300021363	Soil	MAEEKRPEPRPARPLYGYRDIGAAGARGGRRASKRAWAILAVMILVYLAVMLTIYFVEPGLR
Ga0193699_101701252	3300021363	Soil	MADEAPEPPLQPARPLSGYRDIGAPAGARHTRQAVTRAWVILAAMIVIYLAIMLTIYFVEPGLR
Ga0210120_10014352	3300025556	Natural And Restored Wetlands	MAEDGRRRMRPARPLYGYRDVGADVRHGKRATYRAWVILTVMIVLYLAIMLTIYFVEPGL
Ga0210120_10995792	3300025556	Natural And Restored Wetlands	MPEDRQGLRLRPARPLYGYRDIGAAGARHTKAASYRAWAILAVMIVLYLAIMLTIYFVEPGLR
Ga0207650_118551671	3300025925	Switchgrass Rhizosphere	MAEDVPRRRRLRPARPLHGYRDIGAPGARHTPQAVTRAWVILAIMIVIYLAIMLTIYFLEPGLR
Ga0208416_10105132	3300026004	Rice Paddy Soil	MAEDKQRRRLRPARPLYGYRDTGAPEVRHTRRAVTRAWVILAVLIVIYLAIMLTIYFVEPGLR
Ga0307276_100237142	3300028705	Soil	MPEDRHGRRLRPARPLYGYRDIGAAGARYSRRAKYRAWAILALMIVVYLAIMLTIYFVEPGLR
Ga0307276_100591842	3300028705	Soil	MAEERPRRHVRPGRTLYGYRDIGAEGARHGRRAEIRAWVILAVMIVLYLAIMLTIYFVEPGLR
Ga0307276_100778432	3300028705	Soil	DERRRRRLRPARPLYGYRDIGAAGARHTRRASYRAWGILALMIVLYLAIMLTIYFVEPGL
Ga0307291_11428982	3300028707	Soil	MPEYRQGRRLRPARPLYGYRDIGAAGARYSRRAKYRAWAILALMIVIYLAIMLTIYFVEPGLR
Ga0307279_101194601	3300028709	Soil	RRLRPGRPLYGYRDIGAAGARYSRAAVIRAWVILAVLIVIYLAIALTIYFVEPGLR
Ga0307303_100798972	3300028713	Soil	MADERRRRRLRPARPLYGYRDIGAAGARHTRRASYRAWGILALMIVLYLAIMLTIYFVEPGLR
Ga0307315_103031722	3300028721	Soil	MAREGRRDGRREGRRRLRPARPLYGYRDIGAAAGARHSRRAVVRAWLILVLLILIYAAVVLTIYFVEPGLR
Ga0307316_101840602	3300028755	Soil	MAERRRLRPGRPLSGYRDVGAPDVRHSRRAVRRAWVILAVMIVLYLAVVLTIYFIEPGLR
Ga0307316_102855482	3300028755	Soil	MAEERRRRGLRPGRPLYGYRDIGAPGARYSRRAITRAWLILAVLIVIYLAIALTIYFIEPGLR
Ga0307280_102182842	3300028768	Soil	MAVERRRRRLRPGRPLYGYRDIGAAGARYSRAAVIRAWVILAVLIVIYLAIALTIYFVEPGLR
Ga0307282_101450872	3300028784	Soil	MPEDRQGRRLRPARPLYGYRDIGAAGARYSRRAKYRAWAILALMIVIYLAIMLTIYFVEPGLR
Ga0307282_103034551	3300028784	Soil	MAEERRRRRLRPARPLYGYRDIGAAGARHGRRATYRAWAILALMIVLYLAIMLTIYFVEPGLR
Ga0307282_104163742	3300028784	Soil	MSEEKRPEPRPARPLYGYRDIGAAGARHGRRASNRAWAILAVMILVYLAVMLTIYFVEPGLR
Ga0307282_105272862	3300028784	Soil	MAVEPRRSRLRPGRPLYGYRDIGAAGARYSRAAVIRAWVILAVLIVIYLSIALTIYFVEPGLR
Ga0307287_102709511	3300028796	Soil	MARQRRRLLPGRPLVGYRDIGAPPGARHSRRATVRAWLILAVMIVLYLAVVLTIYFVEPGLR
Ga0307284_101839371	3300028799	Soil	HGRRLRPARPLYGYRDIGAAGARYSRRAKYRAWAILALMIVVYLAIMLTIYFVEPGLR
Ga0307284_103558612	3300028799	Soil	MPEDRHGRRLRPARPLYGYRDIGAAGARYGRAAEIRAWVIVAVMILLYLAVMLTIYFVEPGLR
Ga0307312_102166202	3300028828	Soil	MAGEERPEPRPARPLYGYRDIGAAGARHGRRASNRAWAILAVLILVYLAVMLTIYFVEPGLR
Ga0307312_103834192	3300028828	Soil	MAEERRRRGLRPGRPLYGYRDIGAPGARYSRRAVSRAWVILAVLIVIYLAIALTIYFIEPGLR
Ga0307312_105912022	3300028828	Soil	LMPEDRQGRRLRPARPLYGYRDIGAAGARYSRRATYRAWAILALMIVVYLAIMLTIYFVEPGLR
Ga0307312_108307911	3300028828	Soil	EDLLMPEDRQGRRLRPARPLYGYRDIGAAGARYSRRAKYRAWAILALMIVVYLAIMLTIYFVEPGLR
Ga0307277_102382592	3300028881	Soil	MAEERRRRGVRPGRPLYGYRDIGAPGARYSRRAMTRAWVILAVLIVIYLAIALTIYFIEPGLR
Ga0307277_105675701	3300028881	Soil	MADERRRRRRLRPARPLYGYRDIGAAGARHTRRASYRAWGILALMIVLYLAIMLTIYFVEPGLR
Ga0307308_101108712	3300028884	Soil	MPEDRHGRRLRPARPLYGYRDIGAAGARYSRRATYRAWAILALMIVVYLAIMLTIYFVEPGLR
Ga0307308_102170472	3300028884	Soil	MAEQEQPERRRRGLRPGRPLYGYRDTGEPPGDRHSRRAVVRAWLILAVMILLYLAVVLTIYGVEPGLR
Ga0307501_102135452	3300031152	Soil	MAEPERPERRRRRLRPSRPLYGYRDIGAPEGARHTRRAVVRAWVILTVMILIYLAVMLTIYFVEPGLR
Ga0308194_100621202	3300031421	Soil	MPEDRHGRRLRPARPLYGYRDIGAAGARYSRRATYRAWAILAVLIVLYLAIVLTIYLVEPGLR
Ga0308194_102457651	3300031421	Soil	MAERRRRLRLRPGRPLSGYRDVGAPDARHSRRAVYRAWVILAMMILLYMAVALT
Ga0272434_10153086	3300031473	Rock	MAEPPRPRRRRPRPARPLYGYRDIGATGARHSRRATYRAWAILAVMIVVYLAIMLTIYLVEPGLR
Ga0308175_1018753272	3300031938	Soil	MPEREGRRLRRPARPLYGYRDIGAAGARHSRRAVMRSVLILAIMLVIYLAITLTIYFVEPGLR
Ga0308175_1019301222	3300031938	Soil	MAEPAKRRRLRPARSLYGYRDIGAAGARHGRRATIRAWVIVALMIVLYLAIMLTIYAVEPGLR
Ga0308175_1023966202	3300031938	Soil	MADDRQGRRFRPARPLYGYRDIGAAGARHTRGATYRAWAILAVMIVIYLAVVLTIYFVEPGLR
Ga0308176_107403994	3300031996	Soil	MTEGERHRRHLRPARPLYGYRDIGAAGARHSRRATYRAWAILAAMIVIYLAIMLTIYFVEPGLR
Ga0308176_114234062	3300031996	Soil	MAEDDRRRRVHLGRPLYGYRDIGAPGARHTRRATHRAWAILALMIVLYLAIMLTIYFVEPGLR
Ga0268251_102547222	3300032159	Agave	MASEERHRRRIRGRPARPLYGYRDIGPAARHTRVAEIRAWVILALLIVLYLAVVLTIYFVEPGLR
Ga0372943_0841685_327_509	3300034268	Soil	MARQRRLRPARPLFGFRDIGAPGARHTKRAVIRSWVILAICIVLYLAVMLTIYFVEPGLR
Ga0372946_0240193_531_734	3300034384	Soil	MASEPERRRRRGLRPARPLFGYRDIGAPEGARHSRRAVTRAWLILAVMLLLYAAVVLTIYFVEPGLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091817

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences