Metagenome / Metatranscriptome Family F091814

Basic Information
Family ID	F091814
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	54 residues
Representative Sequence	TAIWFLHDRLGWTYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVAEEGGRA
Number of Associated Samples	92
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.234 % of family members)
Environment Ontology (ENVO)	Unclassified (49.533 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.617 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.66% β-sheet: 0.00% Coil/Unstructured: 46.34%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF12838	Fer4_7	64.49
PF00499	Oxidored_q3	12.15
PF00420	Oxidored_q2	9.35
PF01059	Oxidored_q5_N	1.87
PF00662	Proton_antipo_N	0.93
PF00361	Proton_antipo_M	0.93
PF13237	Fer4_10	0.93
PF00146	NADHdh	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0839	NADH:ubiquinone oxidoreductase subunit 6 (chain J)	Energy production and conversion [C]	12.15
COG1009	Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit	Energy production and conversion [C]	1.87
COG0650	Formate hydrogenlyase subunit HyfC	Energy production and conversion [C]	0.93
COG1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	Energy production and conversion [C]	0.93

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.13%
Host-Associated	Host-Associated	1.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.39%
Aquatic	Environmental → Aquatic	3.74%
Plants	Host-Associated → Plants	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.52%
Freshwater	Environmental → Aquatic → Freshwater	1.87%
Sediment	Environmental → Aquatic → Sediment	1.87%
Floodplain	Environmental → Terrestrial → Floodplain	1.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.50%
Loam	Environmental → Terrestrial → Soil → Loam	7.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.74%
Sand	Environmental → Terrestrial → Soil → Sand	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.80%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	17.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.02%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.80%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300010095	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025992	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104 (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300033815	Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_105144063	3300000953	Soil	YLTVIATAIWFFHDQLGWAYDTRFSLALFGVNLALAVPLVFVLDRGHIVAGSVQRRRA*
JGI25384J37096_100405603	3300002561	Grasslands Soil	VIATAIWFLHDRLGWTYDSRFALALFALNLVLAVPLFFVLDRGHIIAGSVVEQGGRA*
JGI25382J37095_102641531	3300002562	Grasslands Soil	GYVTVIATAMWILHGVLGWTYDTRFGLVLFALNVLLAIPLFFGLDRGHLVAGSVAEERA*
Ga0062590_1015411452	3300004157	Soil	LGWAYDARFALALFGMNLLIGIPVFFVLDRGRLVAGSVAEERA*
Ga0066672_101849921	3300005167	Soil	WILHAVLGWTYDTRFGLVLFGLNVLLAIPLFFVLDRGHIVAGSMAGERA*
Ga0066677_101267561	3300005171	Soil	IWFLHDGLGWTYDTRFALALFALNLVLAVPLFFVLDRGRIVAGAVAEA*
Ga0066677_107357882	3300005171	Soil	ATAIWFLHDGLGWTYDTRFALALFALNLALAVPLFFVLDRGRIVAGSMAEGEA*
Ga0066673_100838661	3300005175	Soil	IWFLHDRLGWTYDTRFALALFGVNLLLAVPLFFVLDRGHIIAGSVAEEGGRA*
Ga0066690_100069381	3300005177	Soil	AMWILHAVLGWTYDTRFGLVLFGLNVLLAIPLFFVLDRGHIVAGSMAGERA*
Ga0066690_100761395	3300005177	Soil	TAIWFLHDGLGWTYDTRFALALFALNLVLAVPLFFVLDRGRIVAGSVAEA*
Ga0066690_105841452	3300005177	Soil	HDGLGWTYDTRFALALFALNLVLAVPLFFVLDRGRIVAGSVAEA*
Ga0066684_105481811	3300005179	Soil	LGWSYDTRFGLVLFALNVLLAVPLFFGLDRGHLIAGAVAEEPA*
Ga0066676_101985151	3300005186	Soil	LGWTYDSRFALALFALNLVLAVALFFVLDRGHLIAGSVTEQGERA*
Ga0066388_1078043081	3300005332	Tropical Forest Soil	LTVIATAIWLFHDFLGWAYDTRFSLALFAVNVALAIPLLFVLDRGHIVAGSVERRRA*
Ga0070714_1008732421	3300005435	Agricultural Soil	VLHERLGWAYDSRFALALFGVNILLAVPLFFVLDRGHIVSGSAAEERA*
Ga0066686_102042011	3300005446	Soil	AIWFLHDRLGWTYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVVEEGGRA*
Ga0066689_101278451	3300005447	Soil	LHDRLAWTYDTRFALTLFALNVLLAIPLFFVLDRGHIVAGSVAEEGRAS*
Ga0070706_1000953285	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VMLPLALGYITVMATAIWLLHARLGWNYDARFALALFSLNVLLAIPLFFALDRGHLISGSEARGET*
Ga0070706_1002731284	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	YLTVIATAIWFFHDQLGWAYDTRFNLALFAVNVALAVPLVFVLDRGHVVAGSVERRRA*
Ga0070707_1006940283	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	YITVMATAIWLLHARLGWNYDARFALALFSLNVLLAIPLFFALDRGHLISGSEARGET*
Ga0066692_108456752	3300005555	Soil	IWFLHDQLGWMYDSRFALALFGLNVLLAVPLFFGLDRGHIIAGSVVEEGGRA*
Ga0066699_103046831	3300005561	Soil	ALWILHAVLGWAYDTRFGLALFGLNVLLAIPLFFVLDRGHIVAGSMAGERA*
Ga0066702_107756072	3300005575	Soil	IWFLHDGLGWTYDTRFALALFALNLVLAVPLFFVLDRGRIVAGSVVEA*
Ga0066706_105401533	3300005598	Soil	LVYLTVIATAIWYLHERLGWVYDARFALALGAVNVALAVPLFFVLDRGRLVSGSVAREGA
Ga0075285_10185221	3300005890	Rice Paddy Soil	ATAIWLLHEGLGWTYDTRFALTLFGLNLLLAVPLFFVLDRGHIVSGSVAEERA*
Ga0075023_1006399411	3300006041	Watersheds	AIWFFHDQLGWAYDTRFSVAMFAVNLALAVPLFFVLDRGHLVSGSVQRRRA*
Ga0066652_1017053211	3300006046	Soil	VIASAIWFLHDRLGWTYDARFALTLFGLNVLLAVSLLFWLDRGHIVAGSVAEEGGRA*
Ga0079222_111579042	3300006755	Agricultural Soil	SYVSVVATAVWFFHDRLGWAYDTRFALALFGVNVLLAVPLFFVLDRGHIVSGSVAEERV*
Ga0066653_100532531	3300006791	Soil	IWILHALLGWTYDTRFGLVLFALNVLLAIPLLFGLDRGHLVAGSVAEERA*
Ga0066665_100958311	3300006796	Soil	TAMWILHGVLGWTYDTRFGLVLFALNVLLAIPLFFGLDRGRLVAGSVAEERA*
Ga0066665_108899382	3300006796	Soil	AIWYLHARLGWAYDARFALALAAVNLALAVPLVFVLDRGRLVNGSVARERA*
Ga0066659_115289421	3300006797	Soil	LTYLTVIASAIWFLHDRLGWTYDARFALTLFGLNVLLAVPLLFWLDRGHIVAGSVAEEGGRA*
Ga0079221_102645391	3300006804	Agricultural Soil	AALLPLALTYVTVIASAIWLLHDRMGWTYDSRFALTLFGLNVLLAVPLLFWLDRGHIVAGSMAEQGGRA*
Ga0075424_1025870171	3300006904	Populus Rhizosphere	LLYVSVIATVVWVLRARLGWAYDSRFALALFGVNLLLAVPLFFVLDRGHIVSGSTAEERA
Ga0075435_1019651121	3300007076	Populus Rhizosphere	VTVIATAIWFLHDQLGWMYNTQFALALFGLNLLLAVPLFFVLDRGHIIAGSVAEEGGRA*
Ga0099828_115239522	3300009089	Vadose Zone Soil	AAIWFLHAQLGWEYDARFAATLFGVNLILGVFVFFVLDRGRIVSGSVARERG*
Ga0099828_117257162	3300009089	Vadose Zone Soil	LGWGYDRRFALALFGVNVLLAVPLFFVLDRGRVIAGSVAEERV*
Ga0066709_1008999254	3300009137	Grasslands Soil	LGWTYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVVEEGGQA*
Ga0066709_1023897911	3300009137	Grasslands Soil	TAIWFLHDQLGWTYDTRFALALFGVNLLLAVPLFFVLDRGHIIAGSVAEEGGRA*
Ga0105067_11011522	3300009812	Groundwater Sand	LVYLMVIATAIWYLHDQLGWSYDGRFAGVLFGVNLVLAVPLVFVLDRGRLVSGSMEEEEGKA*
Ga0105057_10611051	3300009813	Groundwater Sand	QLGWSYDGRFAGVLFGVNLVLAVPLVFVLDRGRLVSGSMEEEEGKA*
Ga0127475_10582172	3300010095	Grasslands Soil	VIATAIWILHGLLGWNYDRQFGLALFGLNVLLALPLLFLLDRGHLVAGAVAQEPS*
Ga0127482_10361251	3300010126	Grasslands Soil	ATAIWILHGLLGWNYDRQFGLALFGLNVLLALPLLFLLDRGHLVAGAVAQEPS*
Ga0127482_11178283	3300010126	Grasslands Soil	ATAIWFLHDRLGWTYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVVEEGGRA*
Ga0127455_11708632	3300010132	Grasslands Soil	WILHGLLGWNYDRQFGLALFGLNVLLALPLLFLLDRGHLVGRSGSGAELTWPSA*
Ga0134070_101614893	3300010301	Grasslands Soil	TAIWLLHDQLGWSYGTPFALALFGLNVLLAIPLFFVLDRGHLVSGSVAEEAG*
Ga0134070_102682542	3300010301	Grasslands Soil	AIWILHEQLGWTYGTRFALALFALNVLLAIPLFFVLDRGRIVAGSVAEERA*
Ga0134088_101091841	3300010304	Grasslands Soil	VLHDRLGWTYDSRFALALCGLNVLLAIPLFFVLDRGHLIAGSVAEGGA*
Ga0134064_101092551	3300010325	Grasslands Soil	IATAIWILHGLLGWNYDRQFGLALFGLNVLLALPLLFLLDRGHLVAGAVAQEPS*
Ga0134064_103681552	3300010325	Grasslands Soil	LAYVTVIATAIWILHEQLGWTYGTRFALALFGLNVLLAIPLFFVLDRGRIVAGSVAEERA
Ga0134111_104732622	3300010329	Grasslands Soil	AYVTIIATAIWFLHDRLDWTYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVAEEGGRA*
Ga0134080_102585441	3300010333	Grasslands Soil	PLALGYVTVIATAMWILHGVLGWTYDTRFGLVLFALNVLLAIPLFFGLDRGHLVAGSVAEERA*
Ga0126376_128055561	3300010359	Tropical Forest Soil	IATAIWVFHDSLGWAYDTRFSLALFAVNVALAIPLLFVLDRGHIVAGSVERRRA*
Ga0134066_101315222	3300010364	Grasslands Soil	PLALTYLTVIASAIWFLHDRLGWTYDARFALTLFGLNVLLAVSLLFWLDRGHIVAGSVAEEGGRA*
Ga0137364_102576111	3300012198	Vadose Zone Soil	GWTYDTRFALALFGVNLLLAVPLFFVLDRGHIIAGSVAEEGRRA*
Ga0137382_108906491	3300012200	Vadose Zone Soil	TIIATAIWFLHDRLGWTYDTRFALALFGVNLLLAVPLFFVLDRGHIIAGSVAEEGGRA*
Ga0137382_109140741	3300012200	Vadose Zone Soil	ATAIWFLHDQLGWLYDSRFALALFGLNVLLAVPLFFGLDRGHIIAGSVVEEGGRA*
Ga0137380_100725325	3300012206	Vadose Zone Soil	PLALGYVSVIATAIWLLHDRLAWTYDTRFALTLFALNALLAIPLFFVLDRGHIVAGSVAPEGGRA*
Ga0134028_12530762	3300012224	Grasslands Soil	IWFLHDQLGWTYDTRFALALFGVNLLLAVPLFFVLDRGHIIAGSVAEEGGRA*
Ga0137387_100341861	3300012349	Vadose Zone Soil	VMASAIWLLHARLGWTYDTRFALALFGLNVLLAIPLFFALDRGHLISGSEARGEA*
Ga0137387_101889381	3300012349	Vadose Zone Soil	TAIWFLHDRLGWTYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVAEEGGRA*
Ga0137387_106104273	3300012349	Vadose Zone Soil	LLHDRLAWTYDTRFALTLFALNALLAIPLFFVLDRGHIVAGSVAPEGGRA*
Ga0137369_109904292	3300012355	Vadose Zone Soil	ALGYVTVIATAIWFLHDQLGWTYDTRFALALFGLNLLLAVPLFLVLDRGHIIAGSEAAEGT*
Ga0137404_117431041	3300012929	Vadose Zone Soil	TVIATAIWFLHDQLGWTYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVAAEGAGGGGA*
Ga0134110_103223211	3300012975	Grasslands Soil	IATAMWILHAVLGWTYDTRFGLVLFVLNVLLAIPLFFGLDRGHLVAGSVAEERA*
Ga0134076_101494191	3300012976	Grasslands Soil	QLGWTYGTRFALALFGLNVLLAIPLFFVLDRGRIVAGSVAEERA*
Ga0134075_100495335	3300014154	Grasslands Soil	LTVIATAIWFLHNRLGWSYDSRFALALFGLNLLLAVLLFFVLDRGHIIAGSVAAEEGAGGV*
Ga0134078_101986573	3300014157	Grasslands Soil	DGLGWTYDTRFALALFALNLTLAVPLFFVLDRGRIVAGSVAEA*
Ga0134112_103013921	3300017656	Grasslands Soil	VQLGWAYDTRFALALGAVNVVLAIPLLFVLDRGHLVSGSVARGRA
Ga0134083_104653571	3300017659	Grasslands Soil	HDWLGWTYDSRFALALFALNLVLAVPLFFVLDRGHLIAGSVVEQGERA
Ga0187824_100730123	3300017927	Freshwater Sediment	WFFHDFLGWAYDTRFSLALFAVNVALAIPLLFVLDRGHIVAGSVERRRA
Ga0187787_102663082	3300018029	Tropical Peatland	LALVYVTLLAGAIWVLHERLGWQYDQRFALALLGLNVALAIPLFFVLDRGHLIAGSEARAGGEV
Ga0179592_103422692	3300020199	Vadose Zone Soil	GWNYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVAAEGAGGGGP
Ga0215015_109809122	3300021046	Soil	VLHNRLGWSYDQRFALALFGVNLLLAVPLFFVLDRGRLVAGSVAEERV
Ga0210379_103730552	3300021081	Groundwater Sediment	ALGYLAVLATAIWVLHDRLGWAYNTRFALALFGVNLLIAVPLVFVLDRGRLVAGSVAEEH
Ga0209520_107190561	3300025319	Soil	LASAIWLLHDRLGWAYDTRFSLALFGLNVLLAIPLFFVLDRGRIVAGSVAEEGA
Ga0208775_10179372	3300025992	Rice Paddy Soil	ATAIWLLHEGLGWTYDTRFALTLFGLNLLLAVPLFFVLDRGHIVSGSVAEERA
Ga0209234_12363932	3300026295	Grasslands Soil	ERLGWVYDARFALALGAVNVALAVPLFFVLDRGRLVSGSVARERA
Ga0209237_12865961	3300026297	Grasslands Soil	TIIATAIWFLHDQLGWMYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVAEEGGRA
Ga0209265_10502591	3300026308	Soil	FLHDQLGWTYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVVEEGGRA
Ga0209239_11502083	3300026310	Grasslands Soil	VLATAIWILHALLGWSYDTRFGLVLFALNVLLAVPLFFGLDRGHLIAGAVAEEPA
Ga0209239_12001612	3300026310	Grasslands Soil	TALWILHAVLGWSYDTRFGLVLFVLNVLLAIPLFFGLDRGHLVAGSVAEERA
Ga0209470_11084881	3300026324	Soil	HARLGWTYDARFALALFGLNVLLAIPLFFALDRGHLISGSEARGEA
Ga0209375_12352191	3300026329	Soil	DRLGWPYDTRFALALFGLNLLLAVLLFFVLDRGHIIAGSVAAEEGAGGV
Ga0209804_11881853	3300026335	Soil	LHDGLGWTYDTRFALALFALNLVLAVPLFFVLDRGRIVAGSVAEA
Ga0209159_11898971	3300026343	Soil	DRLGWPYDTRFALALFGLNLLLAVLLFFVLDRGHIIAGSVAAEEGAAGRGA
Ga0209808_13176651	3300026523	Soil	TANWFLHDRLGWTYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVVEEGGRA
Ga0209690_11525143	3300026524	Soil	YITVMASAIWLLHARLGWTYDTRFALALFGLNVLLAIPLFFALDRGHLISGSEARGEA
Ga0209058_13266252	3300026536	Soil	MLPLALGYVTVIATAMWILHGVLGWTYDTRFGLVLFALNVLLAIPLFFGLDRGHLVAGSVAEERA
Ga0179587_106445071	3300026557	Vadose Zone Soil	VIATAIWLLHDQLGWNYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVAAEGAGGGGP
Ga0209689_10070971	3300027748	Soil	AVLGWAYDTRFGLALFGLNVLLAIPLFFVLDRGHIVAGSMAGERA
Ga0209177_100832121	3300027775	Agricultural Soil	WFLHARLGWAYDSRFALALFGVNLLLAVPLFFVLDRGHIVSGSAAEERA
Ga0209074_102886301	3300027787	Agricultural Soil	IATAIWFLHDQLGWTYDTRFALALFALNLALAVPLFFVLDRGRLVAGSMAEGEA
Ga0209180_103911853	3300027846	Vadose Zone Soil	LHDRLGWGYDRRFALALFGVNVLLAVPLFFVLDRGRVIAGSVAEERV
Ga0209590_102142811	3300027882	Vadose Zone Soil	LTVIATAIWFLHDQLGWTYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVAAEGAGGGGA
Ga0209069_106787221	3300027915	Watersheds	VYLTVIATAIWFFHDQLGWAYDTRFSVAMFAVNLALAVPLFFVLDRGHLVSGSVQRRRA
Ga0209853_10911661	3300027961	Groundwater Sand	TVVASAIWLLHDRLGWVYDTRFSLALFGLNVLLAIPLFFVLDRGHIIAGSVAEERA
Ga0307282_104249921	3300028784	Soil	DRLGWTYDTRFALVLFAVNLLLAVPLFFVLDRGHIIAGSVAEERA
Ga0308194_100823603	3300031421	Soil	IWLLHDRLGWTYDTRFALVLFAVNLLLAVPLFFVLDRGHIIAGSVAEERA
Ga0307469_117070222	3300031720	Hardwood Forest Soil	LHDRLKWAYDTRFALALFGMNLLIGIPLFFLLDRGRLVAGSVVEEQV
Ga0307471_1000101041	3300032180	Hardwood Forest Soil	LSWAYDSRFALALFGVNLLLAVPLFFVLDRGHIVSGSAAEERA
Ga0307471_1014808121	3300032180	Hardwood Forest Soil	VTVIATAIWFLHDRLGWMYDTRFALALFGLNLLLAVPLFFVLDRGHIIAGSVLEEGGSA
Ga0307472_1023567502	3300032205	Hardwood Forest Soil	LALGYVTVIATAIWFLHDQLGWIYNTQFALALFGLNLLLAVPLFFVLDRGHIIAGSVAEEGGRA
Ga0310812_104881872	3300032421	Soil	ALIYLTVIATAIWFFHDQLGWAYDTRFSLALFGVNLALAVPLVFVLDRGHIVAGSVQRRR
Ga0316628_1011581343	3300033513	Soil	YLTVVATAIWYLHAVLGWAYDMRFSLVMFALNLVLAVPVFLVLDRGHLISGSVQRRSA
Ga0364930_0138561_633_818	3300033814	Sediment	VYLMVIATAIWYLHDQLGWGYDGRFAGVLFAINLALAVPLFFVLDRGRLVSGSMEGEGGK
Ga0364946_014478_3_170	3300033815	Sediment	ATAIWYLHDQLGWGYDRRFAGVLFAVNLALAVPLVFVLDRGRLVSGSMEEEGGKA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091814

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign