Metagenome / Metatranscriptome Family F091782

Basic Information
Family ID	F091782
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	40 residues
Representative Sequence	KERVAAYAEAGVQHIMVHPQDREVDDWDTVIEGVGRVAAG
Number of Associated Samples	95
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.67 %
% of genes near scaffold ends (potentially truncated)	92.52 %
% of genes from short scaffolds (< 2000 bps)	91.59 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Bacteria (71.028 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.234 % of family members)
Environment Ontology (ENVO)	Unclassified (29.907 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.533 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.88% β-sheet: 8.82% Coil/Unstructured: 60.29%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00296	Bac_luciferase	9.35
PF00583	Acetyltransf_1	5.61
PF01850	PIN	4.67
PF01402	RHH_1	3.74
PF05726	Pirin_C	3.74
PF00561	Abhydrolase_1	3.74
PF00903	Glyoxalase	2.80
PF13701	DDE_Tnp_1_4	2.80
PF04191	PEMT	2.80
PF07969	Amidohydro_3	2.80
PF04140	ICMT	1.87
PF12697	Abhydrolase_6	1.87
PF13561	adh_short_C2	1.87
PF13356	Arm-DNA-bind_3	1.87
PF02823	ATP-synt_DE_N	0.93
PF10431	ClpB_D2-small	0.93
PF00441	Acyl-CoA_dh_1	0.93
PF00753	Lactamase_B	0.93
PF08352	oligo_HPY	0.93
PF00691	OmpA	0.93
PF02776	TPP_enzyme_N	0.93
PF13551	HTH_29	0.93
PF00144	Beta-lactamase	0.93
PF13361	UvrD_C	0.93
PF13517	FG-GAP_3	0.93
PF00264	Tyrosinase	0.93
PF05199	GMC_oxred_C	0.93
PF01645	Glu_synthase	0.93
PF13545	HTH_Crp_2	0.93
PF00440	TetR_N	0.93
PF02602	HEM4	0.93
PF02775	TPP_enzyme_C	0.93
PF00581	Rhodanese	0.93
PF08028	Acyl-CoA_dh_2	0.93
PF10415	FumaraseC_C	0.93
PF01541	GIY-YIG	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	9.35
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	3.74
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.87
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.93
COG0355	FoF1-type ATP synthase, epsilon subunit	Energy production and conversion [C]	0.93
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.93
COG1587	Uroporphyrinogen-III synthase	Coenzyme transport and metabolism [H]	0.93
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.93
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.93
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.03 %
Unclassified	root	N/A	28.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.03 %
Unclassified	root	N/A	28.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.03 %
Unclassified	root	N/A	28.97 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.73 %
Unclassified	root	N/A	28.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.19 %
Unclassified	root	N/A	28.97 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.97 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	9.35 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.61 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.67 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.67 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.67 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.87 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.93 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.97 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.67 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.87 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.67 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.87 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.87 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.67 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.87 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.93 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.93 %
unclassified Kofleriaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.67 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.87 %
Kofleriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	0.93 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.93 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.93 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100226173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1477	Open in IMG/M
3300004635\|Ga0062388_101051270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300005178\|Ga0066688_10931138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	534	Open in IMG/M
3300005434\|Ga0070709_10290207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1192	Open in IMG/M
3300005529\|Ga0070741_10626059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	957	Open in IMG/M
3300005543\|Ga0070672_100956357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	758	Open in IMG/M
3300005566\|Ga0066693_10030835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1693	Open in IMG/M
3300005764\|Ga0066903_105575423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300006791\|Ga0066653_10022791	All Organisms → cellular organisms → Bacteria	2372	Open in IMG/M
3300006794\|Ga0066658_10579913	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300006796\|Ga0066665_10305465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1281	Open in IMG/M
3300006903\|Ga0075426_11477723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	517	Open in IMG/M
3300009137\|Ga0066709_103660188	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300009143\|Ga0099792_10124985	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300009143\|Ga0099792_10241886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1047	Open in IMG/M
3300009156\|Ga0111538_10667038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1318	Open in IMG/M
3300009156\|Ga0111538_13444655	Not Available	549	Open in IMG/M
3300010045\|Ga0126311_11228238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300010048\|Ga0126373_11485911	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300010321\|Ga0134067_10412636	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300010322\|Ga0134084_10381509	Not Available	545	Open in IMG/M
3300010325\|Ga0134064_10256433	Not Available	649	Open in IMG/M
3300010326\|Ga0134065_10381372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	561	Open in IMG/M
3300010361\|Ga0126378_12230077	Not Available	625	Open in IMG/M
3300010366\|Ga0126379_12322168	Not Available	636	Open in IMG/M
3300010376\|Ga0126381_101782508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	889	Open in IMG/M
3300010880\|Ga0126350_11262927	Not Available	589	Open in IMG/M
3300011119\|Ga0105246_10873160	Not Available	804	Open in IMG/M
3300011269\|Ga0137392_10087319	All Organisms → cellular organisms → Bacteria	2433	Open in IMG/M
3300011270\|Ga0137391_11361924	Not Available	556	Open in IMG/M
3300012096\|Ga0137389_11648207	Not Available	537	Open in IMG/M
3300012189\|Ga0137388_10172826	All Organisms → cellular organisms → Bacteria → Proteobacteria	1931	Open in IMG/M
3300012202\|Ga0137363_11377958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	595	Open in IMG/M
3300012208\|Ga0137376_11784789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	506	Open in IMG/M
3300012212\|Ga0150985_100722673	Not Available	587	Open in IMG/M
3300012212\|Ga0150985_100875919	All Organisms → cellular organisms → Bacteria → Terrabacteria group	602	Open in IMG/M
3300012212\|Ga0150985_112226468	Not Available	1283	Open in IMG/M
3300012363\|Ga0137390_11452814	Not Available	628	Open in IMG/M
3300012469\|Ga0150984_103484766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300012582\|Ga0137358_10717731	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012917\|Ga0137395_10273404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1192	Open in IMG/M
3300012917\|Ga0137395_10813230	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	677	Open in IMG/M
3300012923\|Ga0137359_10529423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1038	Open in IMG/M
3300012971\|Ga0126369_10371351	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300014492\|Ga0182013_10529180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	610	Open in IMG/M
3300016294\|Ga0182041_11501320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300016422\|Ga0182039_11362297	Not Available	644	Open in IMG/M
3300016422\|Ga0182039_11740957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300017995\|Ga0187816_10244883	Not Available	782	Open in IMG/M
3300018060\|Ga0187765_10485190	Not Available	779	Open in IMG/M
3300018088\|Ga0187771_10084832	All Organisms → cellular organisms → Bacteria → Proteobacteria	2528	Open in IMG/M
3300019786\|Ga0182025_1221046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2035	Open in IMG/M
3300020580\|Ga0210403_11349491	Not Available	542	Open in IMG/M
3300021401\|Ga0210393_11261235	Not Available	594	Open in IMG/M
3300021406\|Ga0210386_11511279	Not Available	560	Open in IMG/M
3300021432\|Ga0210384_10974442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	749	Open in IMG/M
3300021479\|Ga0210410_10221267	All Organisms → cellular organisms → Bacteria	1697	Open in IMG/M
3300025898\|Ga0207692_10943076	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300025915\|Ga0207693_11060269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300025936\|Ga0207670_11472942	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300026316\|Ga0209155_1048380	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300026490\|Ga0257153_1046119	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300026508\|Ga0257161_1135224	Not Available	518	Open in IMG/M
3300026547\|Ga0209156_10437845	All Organisms → cellular organisms → Bacteria → Terrabacteria group	541	Open in IMG/M
3300027583\|Ga0209527_1115652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300027663\|Ga0208990_1010803	All Organisms → cellular organisms → Bacteria	3043	Open in IMG/M
3300027905\|Ga0209415_10949169	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300027965\|Ga0209062_1180220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	791	Open in IMG/M
3300028781\|Ga0302223_10110189	Not Available	911	Open in IMG/M
3300030730\|Ga0307482_1215936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	589	Open in IMG/M
3300030739\|Ga0302311_10176833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1638	Open in IMG/M
3300031525\|Ga0302326_12723303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300031545\|Ga0318541_10155913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1254	Open in IMG/M
3300031545\|Ga0318541_10658738	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300031573\|Ga0310915_10885347	Not Available	626	Open in IMG/M
3300031672\|Ga0307373_10190049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1496	Open in IMG/M
3300031708\|Ga0310686_111021766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300031719\|Ga0306917_10765016	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300031719\|Ga0306917_11443845	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300031724\|Ga0318500_10441726	Not Available	650	Open in IMG/M
3300031744\|Ga0306918_10155763	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300031744\|Ga0306918_10658257	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031770\|Ga0318521_10761985	Not Available	589	Open in IMG/M
3300031779\|Ga0318566_10578016	Not Available	548	Open in IMG/M
3300031781\|Ga0318547_10713451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300031782\|Ga0318552_10223381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	955	Open in IMG/M
3300031795\|Ga0318557_10118408	Not Available	1183	Open in IMG/M
3300031795\|Ga0318557_10353162	Not Available	676	Open in IMG/M
3300031798\|Ga0318523_10045081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2055	Open in IMG/M
3300031823\|Ga0307478_10107935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2165	Open in IMG/M
3300031859\|Ga0318527_10147851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	984	Open in IMG/M
3300031880\|Ga0318544_10251040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300031890\|Ga0306925_10227715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2011	Open in IMG/M
3300031910\|Ga0306923_10350037	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300031942\|Ga0310916_10796427	Not Available	796	Open in IMG/M
3300031945\|Ga0310913_10526753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	839	Open in IMG/M
3300031954\|Ga0306926_12950064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300032060\|Ga0318505_10186831	Not Available	968	Open in IMG/M
3300032060\|Ga0318505_10368835	Not Available	678	Open in IMG/M
3300032090\|Ga0318518_10478408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300032160\|Ga0311301_10834453	All Organisms → cellular organisms → Bacteria → Proteobacteria	1258	Open in IMG/M
3300032261\|Ga0306920_100357904	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300032261\|Ga0306920_100683456	Not Available	1513	Open in IMG/M
3300032770\|Ga0335085_12173242	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300032955\|Ga0335076_11227204	Not Available	634	Open in IMG/M
3300033289\|Ga0310914_10212716	All Organisms → cellular organisms → Bacteria → Proteobacteria	1729	Open in IMG/M
3300033290\|Ga0318519_10108561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.59%
Host-Associated	Host-Associated	8.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.78%
Plants	Host-Associated → Plants	8.41%
Aquatic	Environmental → Aquatic	2.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.61%
Freshwater	Environmental → Aquatic → Freshwater	2.80%
Peat	Environmental → Terrestrial → Peat	2.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.96%
Loam	Environmental → Terrestrial → Soil → Loam	7.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Clay	Environmental → Terrestrial → Soil → Clay	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.87%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091782

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1002261731	3300004152	Bog Forest Soil	ELRDRVAEYAAVGVGHIMVHPHDRNVDDWDSVIEGVGRLAGG*
Ga0062388_1010512702	3300004635	Bog Forest Soil	GMMRDRVAAYEAAGVQHVMVHPQDREIDDWDEVIEGVGRLAAG*
Ga0066688_109311381	3300005178	Soil	GMMKERVAAYAEAGVRHIMVHPQDREIDDWDTVLDAVGKLAAG*
Ga0070709_102902071	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ERVAAYAEAGVQHIMVHPQDREVDDWDTVLDAVGKLAAG*
Ga0070741_106260591	3300005529	Surface Soil	ERVAAYAEAGVQHIMVHPQDREVDDWDAVLEGVGKVAAG*
Ga0070672_1009563571	3300005543	Miscanthus Rhizosphere	ERIAAYEAAGVQHVMVHPLDREVDEWDEVIEGVGKAAAG*
Ga0066693_100308355	3300005566	Soil	VAAYAEAGVQHIMVHPQDREIDDWDTVLDAVGKLAG*
Ga0066903_1055754232	3300005764	Tropical Forest Soil	AAYKAAGVQHVMVHPQDREVDDWDTVIEGIGRVAAG*
Ga0066653_100227916	3300006791	Soil	ERIAAYAEAGVQHIMVHPQDREIDNWDTVIEGVGKVAAG*
Ga0066658_105799132	3300006794	Soil	MMKERVAAYAEAGVQHIMVHPQDREIDDWDTVIEGVGKVAAG*
Ga0066665_103054651	3300006796	Soil	DVGMMRERVAAYAAAGVQHVMVHPQDREVDDWDTVIEGVGRLATG*
Ga0075426_114777232	3300006903	Populus Rhizosphere	GMMRERVAAYAEAGVQHIMVHPQDREVDDWDTVLDAVGKLAAG*
Ga0066709_1036601881	3300009137	Grasslands Soil	MKERVAAYAEAGVQHIMVHPQDREIDDCDTVLEGVGKLAG*
Ga0099792_101249851	3300009143	Vadose Zone Soil	ERVAAYAEAGVQHIMVHPQDREIDDWDTVIEGVGKLAAGR*
Ga0099792_102418863	3300009143	Vadose Zone Soil	ERVAAYAEAGVQHIMVHPQDREVDDWDTVLDAVGKLAG*
Ga0111538_106670382	3300009156	Populus Rhizosphere	MMKERVAAYEDAGVQHIMVHPQDREVDDWDTVIAGVGKVAAD*
Ga0111538_134446552	3300009156	Populus Rhizosphere	VAAYADAGVQHIMVHPQDREVDDWDTVIAGVGKVAAG*
Ga0126311_112282381	3300010045	Serpentine Soil	ERIAAYAKAGVQHVMVHPQDREVDDWDTVIEGVGKVAAG*
Ga0126373_114859111	3300010048	Tropical Forest Soil	QGELRERLAAYEVAGVQHVMVHPLNRDIDDWDDVIEGVGRVAGRV*
Ga0134067_104126361	3300010321	Grasslands Soil	YAEAGVQHIMVHPQDREIDDWDTVLDAVGKLTAG*
Ga0134084_103815092	3300010322	Grasslands Soil	VAAYAEAGVQHIMVHPQDREIDDWDTVLDTVGKLAAG*
Ga0134064_102564331	3300010325	Grasslands Soil	VAAYAEAGVQHIMVHPQDREIDDWDTVLDAVGKLTAG*
Ga0134065_103813722	3300010326	Grasslands Soil	YEAAGVQHVMVHPQDREVDDWDTVIEGVGRVASG*
Ga0126378_122300772	3300010361	Tropical Forest Soil	GYANAGVQHVMVHPQDREIDDWDEVIEGVGRLAAG*
Ga0126379_123221681	3300010366	Tropical Forest Soil	RDRIAGYANAGVQHVMVHPQDREIDDWDEVIEGVGRLAAG*
Ga0126381_1017825081	3300010376	Tropical Forest Soil	GELRDRIAAYAEAGVQHVMVHPLDRDIDDWDAVIEGTGRVAVRLS*
Ga0126350_112629272	3300010880	Boreal Forest Soil	VAAYAAAGVQHVMVHPQDREVDEWDTVIEGVGRLVR*
Ga0105246_108731602	3300011119	Miscanthus Rhizosphere	AMMKERVAAYAEAGVQHIMVHPQDREVDDWDTVIAGVGKVAAD*
Ga0137392_100873195	3300011269	Vadose Zone Soil	RVVAYAEAGVQHVMVHPQDREVDDWDIVIEGVGQVAAA*
Ga0137391_113619241	3300011270	Vadose Zone Soil	VGMMKERVAAYAEAGVQHVMVHPQDREVDDWDDVIEGAGKVAAA*
Ga0137389_116482071	3300012096	Vadose Zone Soil	KERVAAYAEAGVQHIMVHPQDREVDDWDTVIEGVGRVAAG*
Ga0137388_101728261	3300012189	Vadose Zone Soil	ERVVAYAEAGVQHVMVHPQDREVDDWDIVIEGVGQVAAA*
Ga0137363_113779582	3300012202	Vadose Zone Soil	MAYAAAGVQHVMVHPQDREVDDWDTVIEGVGRLATG*
Ga0137376_117847891	3300012208	Vadose Zone Soil	AYAAAGVQHVMVHPQDREVDDWDTVIEGVGRLTTG*
Ga0150985_1007226732	3300012212	Avena Fatua Rhizosphere	RVAAYREVGVQHIMVHPQDREVDDWDTVIEGVGKVAAAF*
Ga0150985_1008759192	3300012212	Avena Fatua Rhizosphere	RVAAYAEAGVQHIMVHPQDREIDDWDTVLEGVGKLAG*
Ga0150985_1122264684	3300012212	Avena Fatua Rhizosphere	MMKERVAAYAEAGVQHIMVHPQDREIDDWDTVIEGVGKVAAA*
Ga0137390_114528141	3300012363	Vadose Zone Soil	VAAYAEAGVQHVMVHPQDREDDDWDTVIDGVGKVAGG*
Ga0150984_1034847662	3300012469	Avena Fatua Rhizosphere	VGMMKERVAAYAEAGVQHIMVHPQDREVDDCETVIDGVGKIAIG*
Ga0137358_107177311	3300012582	Vadose Zone Soil	AYAEAGVQHIMVHPQDREVDDWDTVIEGVGKVAAA*
Ga0137395_102734042	3300012917	Vadose Zone Soil	YAAAGVQHVMVHPQDREVDDWDTVIEGVGRLATG*
Ga0137395_108132302	3300012917	Vadose Zone Soil	MMKERVAAYAEAGVQHIMVHPQDREVDDWDTVIEGVGKLAAQ*
Ga0137359_105294232	3300012923	Vadose Zone Soil	VGMMRERVMAYAAAGVQHVMVHPQDREVDDWDTVIEGVGRLTTG*
Ga0126369_103713511	3300012971	Tropical Forest Soil	ERVAAYAEAGVQHIMVHPQDREVDDWDTVLAAVGKLAAG*
Ga0182013_105291801	3300014492	Bog	DRVAAYAAAGVGHIMVHPHDRNVDDWDSVIEGVGRLAASGA*
Ga0182041_115013201	3300016294	Soil	GMMRERIAAYAQAGVQHIMVHPRDREVDDWDAFIESVGRMGAA
Ga0182039_113622972	3300016422	Soil	RERVAAYDAAGVQHVMVHPQDREIDDWDRVIEGVGRIAAG
Ga0182039_117409571	3300016422	Soil	MLRERVSAYEAAGVQHVMVHPQDREVDDWDTVIEGVGR
Ga0187816_102448831	3300017995	Freshwater Sediment	ERVAAYAEAGVQHIMVHPQDREIDDWHTVIEGVGKVAAG
Ga0187765_104851901	3300018060	Tropical Peatland	RDEGELRARIAAYAEAGVQHVMVHPLDRDVDDWDAVIEGAGRVAA
Ga0187771_100848325	3300018088	Tropical Peatland	KERVAAYEAAGVQHVMVHPQDREVDDWETVIAGVGKLAAG
Ga0182025_12210462	3300019786	Permafrost	MMKERVAAYAEAGVQHVMVHPQDREIDDWNTVIEGVGRLL
Ga0210403_113494912	3300020580	Soil	RERVAAYEAAGVQHVMVHPQDREIDDWDIVIEGVGKLI
Ga0210393_112612351	3300021401	Soil	KDVGMMKERVAAYEAAGVQHVMVHPQDREVDDWDTVISGVGKLI
Ga0210386_115112791	3300021406	Soil	VAAYAAAGVQHIMVHPQDREVDDWDTVIAGVGKLI
Ga0210384_109744422	3300021432	Soil	RVAAYAAAGVQHVMVHPQDREVDDWDTVIEGVGRLATG
Ga0210410_102212674	3300021479	Soil	VAAYATAGVQHVMVHPQDREIDDWDTVIEGVGKLI
Ga0207692_109430761	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	ERVAAYAEAGVQHIMVHPQDREVDDWDTVLDAVGKLAAG
Ga0207693_110602692	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MMKERVAAYAGAGVQHIMVHPQDREVDDWDTVIEGVGKLAAG
Ga0207670_114729422	3300025936	Switchgrass Rhizosphere	IAAYEAAGVQHVMVHPLDREVDEWDEVIEGVGKAAAG
Ga0209155_10483801	3300026316	Soil	KERVAAYVEAGVQHIMVHPQDREIDDWDAVLDAVGKLAG
Ga0257153_10461191	3300026490	Soil	MKERVAAYAEAGVQHIMVHPQDREIDDWDTVIEGVGKLAVA
Ga0257161_11352241	3300026508	Soil	ERVAAYAEAGVQHVMVHPQDREIDDWDTVIEGVGKVAAG
Ga0209156_104378451	3300026547	Soil	RERVAAYVEAGVQHIMVHPQDREVDDWDTVLDAVGKLAG
Ga0209527_11156522	3300027583	Forest Soil	MMKERVAAYAEAGVQHIMVHPQDREIDDWDTVIEGVGKLAAA
Ga0208990_10108035	3300027663	Forest Soil	VAAYAEAGVQHVMVHPQDREVDDWDTVIEGVGKVAAG
Ga0209415_109491692	3300027905	Peatlands Soil	GEMRERVAAYGEAGVQHIMVHPQDREVDDWDTVIEGVGRVAAG
Ga0209062_11802202	3300027965	Surface Soil	KERVAAYAEAGVQHIMVHPQDREVDDWDAVLEGVGKVAAG
Ga0302223_101101891	3300028781	Palsa	DRVAAYAAIGVGHIMIHPHDRNVDDWDSVIEGVGRLAGG
Ga0307482_12159362	3300030730	Hardwood Forest Soil	MMRDRVAAYKGAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0302311_101768332	3300030739	Palsa	RVAAYSAIGVGHIMIHPHDRNVDDWDSVIEGVGRLAGG
Ga0302326_127233032	3300031525	Palsa	PGMMQERVAAYKEAGVQHIMVHPQDREVDDWNTVIEAVGRLAAG
Ga0318541_101559133	3300031545	Soil	MRNRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVATA
Ga0318541_106587381	3300031545	Soil	MRERVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVARD
Ga0310915_108853471	3300031573	Soil	DRLAEFAAAGVQHVMVHPLNRDIDDWDEVIEGVGRVASRT
Ga0307373_101900494	3300031672	Soil	AFAEIGVQHIMVHPQDREVDDWDTVIAGVGKLAAG
Ga0310686_1110217662	3300031708	Soil	GELRERIAAYAEAGVQHVMVHPLDRDIDDWDAVIEGTGRVAA
Ga0306917_107650161	3300031719	Soil	AAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVARD
Ga0306917_114438451	3300031719	Soil	AAYEAVGVQHVMVHPHDREVDDWDTVIEGVGRVAAYM
Ga0318500_104417262	3300031724	Soil	RDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRLLH
Ga0306918_101557631	3300031744	Soil	VGMMRDRVAAYKAAGVQHVMVHPQDREVDDWDTVIEGVGRVVAS
Ga0306918_106582572	3300031744	Soil	VGMMRERVAAYAAAGVQHVMVHPQDREVDDWDTVIEGVGRLARG
Ga0318521_107619852	3300031770	Soil	MRERVAAYDAAGVQHVMVHPQDREIDDWDRVIEGVGRIAAG
Ga0318566_105780161	3300031779	Soil	GMMRNRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVATS
Ga0318547_107134511	3300031781	Soil	AYEAAGVQHVMVHPQDREVDDWDEVIEGVGRLATG
Ga0318552_102233812	3300031782	Soil	GMMRDRVAAYEAAGVQHVMVHPQDREVDDWDEVIEGVGRLATG
Ga0318557_101184082	3300031795	Soil	DIGMMRDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRLLH
Ga0318557_103531622	3300031795	Soil	SAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0318523_100450814	3300031798	Soil	VAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVATA
Ga0307478_101079352	3300031823	Hardwood Forest Soil	MMRDRVAAYKAAGVQHVMVHPQDREVDDWDTVIEGVGRVATGY
Ga0318527_101478513	3300031859	Soil	AAYKAAGVQHVMVHPQDREVDDWDTVIEGVGRIAAG
Ga0318544_102510401	3300031880	Soil	MMRDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRLANT
Ga0306925_102277151	3300031890	Soil	GMMRERVAAYEAVGVQHVMVHPQDREIDDWDTVIEGAGRVANA
Ga0306923_103500371	3300031910	Soil	DRVAAYKAAGVQHVMVHPQDREVDDWDTVIEGVGRVVAS
Ga0310916_107964273	3300031942	Soil	MMRERVAAYEAAGVQHVMVHPHDREVDDWDTVIEGVGRVASG
Ga0310913_105267531	3300031945	Soil	ERVAAYEAVGVQHVMVHPQDREIDDWDTVIEGAGRVANA
Ga0306926_129500642	3300031954	Soil	VGMMRDRIAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0318505_101868312	3300032060	Soil	DVGMLRERVSAYEAAGVQHVMVHPQDREVDDWDTVIEGVGRVAAG
Ga0318505_103688352	3300032060	Soil	MRDRVAAYKAAGVQHVMVHPQDREVDDWDSVIEGVGRVATG
Ga0318518_104784082	3300032090	Soil	GELRDRLGGYAAIGVQHVMVHPVDRDIDDWDAVIEGTGRVAARSPSLAAGRSP
Ga0311301_108344533	3300032160	Peatlands Soil	MMKERVAAYAEAGVQHIMVHPQDREVDDWDTVIEGVGKVAAG
Ga0306920_1003579041	3300032261	Soil	ARIAAYGEAGVQHVMIHPVDRNVDDWDAVIEGTGRVAN
Ga0306920_1006834561	3300032261	Soil	DVGMMRDRVAAYKAAGVQHVMVHPQDREVDDWDTVIEGVGRVVAS
Ga0335085_121732422	3300032770	Soil	VGMMQERVAAYAEAGVQHIMVHPQDREVDDWDTVLDGVGKVSGASKM
Ga0335076_112272042	3300032955	Soil	AAYAEAGVQHVMVHPLNRDIDDWDAVIDGAGRVAA
Ga0310914_102127164	3300033289	Soil	ELRERLAAYEVVVQHVMVHPLNRDIDDWNEVIEGLGRVAARI
Ga0318519_101085613	3300033290	Soil	GMMRDRVAAYEAAGVQHVMVHPQDREVDDWDTVIEGVGCLAVG

Hidden Markov Model


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