NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F091771

Metagenome / Metatranscriptome Family F091771

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F091771
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 64 residues
Representative Sequence MDPARLPEHTAVCKNCKKPVSWDNLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGISRKD
Number of Associated Samples 83
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 29.91 %
% of genes near scaffold ends (potentially truncated) 23.36 %
% of genes from short scaffolds (< 2000 bps) 78.50 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.196 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(10.280 % of family members)
Environment Ontology (ENVO) Unclassified
(28.037 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(35.514 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 31.87%    Coil/Unstructured: 68.13%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF07876Dabb 28.97
PF00072Response_reg 17.76
PF08448PAS_4 4.67
PF13847Methyltransf_31 3.74
PF01590GAF 3.74
PF01135PCMT 0.93
PF03712Cu2_monoox_C 0.93
PF01557FAA_hydrolase 0.93
PF01253SUI1 0.93
PF08447PAS_3 0.93
PF00326Peptidase_S9 0.93
PF04343DUF488 0.93
PF00990GGDEF 0.93
PF13469Sulfotransfer_3 0.93
PF064393keto-disac_hyd 0.93
PF00563EAL 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0023Translation initiation factor 1 (eIF-1/SUI1)Translation, ribosomal structure and biogenesis [J] 0.93
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 0.93
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.93
COG2518Protein-L-isoaspartate O-methyltransferasePosttranslational modification, protein turnover, chaperones [O] 0.93
COG2519tRNA A58 N-methylase Trm61Translation, ribosomal structure and biogenesis [J] 0.93
COG3189Uncharacterized conserved protein YeaO, DUF488 familyFunction unknown [S] 0.93
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 0.93
COG4122tRNA 5-hydroxyU34 O-methylase TrmR/YrrMTranslation, ribosomal structure and biogenesis [J] 0.93
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 0.93
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.20 %
UnclassifiedrootN/A2.80 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101719946All Organisms → cellular organisms → Bacteria2723Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101721803All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101722341All Organisms → cellular organisms → Bacteria1380Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101722504All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300000789|JGI1027J11758_12344602All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300000891|JGI10214J12806_10780806All Organisms → cellular organisms → Bacteria1056Open in IMG/M
3300003321|soilH1_10309738All Organisms → cellular organisms → Bacteria1929Open in IMG/M
3300004463|Ga0063356_101478918All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300004463|Ga0063356_102577873All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300004463|Ga0063356_103817155All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300004463|Ga0063356_105514126All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300005332|Ga0066388_107900526All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300005343|Ga0070687_100184849All Organisms → cellular organisms → Bacteria1251Open in IMG/M
3300005440|Ga0070705_100331648All Organisms → cellular organisms → Bacteria1102Open in IMG/M
3300005444|Ga0070694_101035860All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300005468|Ga0070707_100090132All Organisms → cellular organisms → Bacteria2968Open in IMG/M
3300005471|Ga0070698_100543026All Organisms → cellular organisms → Bacteria1101Open in IMG/M
3300005529|Ga0070741_10570789All Organisms → cellular organisms → Bacteria1014Open in IMG/M
3300005536|Ga0070697_100435728All Organisms → cellular organisms → Bacteria1140Open in IMG/M
3300005536|Ga0070697_101974255All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300005537|Ga0070730_10092481All Organisms → cellular organisms → Bacteria2102Open in IMG/M
3300005538|Ga0070731_10009802All Organisms → cellular organisms → Bacteria7175Open in IMG/M
3300005538|Ga0070731_10603060All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300005542|Ga0070732_10608549All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300005615|Ga0070702_101604320All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300005829|Ga0074479_10772499Not Available955Open in IMG/M
3300005829|Ga0074479_10773553All Organisms → cellular organisms → Bacteria1236Open in IMG/M
3300005836|Ga0074470_10998373All Organisms → cellular organisms → Bacteria94903Open in IMG/M
3300006791|Ga0066653_10191846All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300006844|Ga0075428_100136405All Organisms → cellular organisms → Bacteria2668Open in IMG/M
3300006844|Ga0075428_100968089All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300006852|Ga0075433_10385225All Organisms → cellular organisms → Bacteria1238Open in IMG/M
3300006865|Ga0073934_10112759All Organisms → cellular organisms → Bacteria2032Open in IMG/M
3300006894|Ga0079215_10497794All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300009094|Ga0111539_10537090All Organisms → cellular organisms → Bacteria1362Open in IMG/M
3300009094|Ga0111539_13502176All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300009156|Ga0111538_11501811All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300009157|Ga0105092_10100178All Organisms → cellular organisms → Bacteria1589Open in IMG/M
3300009527|Ga0114942_1052376All Organisms → cellular organisms → Bacteria1257Open in IMG/M
3300009597|Ga0105259_1084350All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300009597|Ga0105259_1173947All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300009678|Ga0105252_10114057All Organisms → cellular organisms → Bacteria1097Open in IMG/M
3300009678|Ga0105252_10234910All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300010337|Ga0134062_10694852All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300010398|Ga0126383_12160431All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300010399|Ga0134127_10021939All Organisms → cellular organisms → Bacteria4972Open in IMG/M
3300010400|Ga0134122_10045434All Organisms → cellular organisms → Bacteria3360Open in IMG/M
3300010400|Ga0134122_10225797All Organisms → cellular organisms → Bacteria1567Open in IMG/M
3300010400|Ga0134122_11026198All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300010400|Ga0134122_11280365All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300010400|Ga0134122_12377642All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300010403|Ga0134123_10093566All Organisms → cellular organisms → Bacteria2374Open in IMG/M
3300011120|Ga0150983_12593895All Organisms → cellular organisms → Bacteria → Proteobacteria531Open in IMG/M
3300011403|Ga0137313_1097337All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300011445|Ga0137427_10337877All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300012944|Ga0137410_10000245All Organisms → cellular organisms → Bacteria38682Open in IMG/M
3300012971|Ga0126369_11398092All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300013297|Ga0157378_13067725All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300015052|Ga0137411_1139818All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300016294|Ga0182041_11121065All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300016404|Ga0182037_12118721All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300017961|Ga0187778_10005233All Organisms → cellular organisms → Bacteria8442Open in IMG/M
3300017965|Ga0190266_10030294All Organisms → cellular organisms → Bacteria1713Open in IMG/M
3300018064|Ga0187773_10456322All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300018476|Ga0190274_11816721All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300019458|Ga0187892_10014093All Organisms → cellular organisms → Bacteria9025Open in IMG/M
3300019880|Ga0193712_1114584All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300020202|Ga0196964_10191533All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300020579|Ga0210407_11233274All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300021384|Ga0213876_10158617Not Available1203Open in IMG/M
3300021432|Ga0210384_10102283All Organisms → cellular organisms → Bacteria2570Open in IMG/M
3300022549|Ga0212091_10117802All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300025310|Ga0209172_10161237All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300025311|Ga0209343_10202243All Organisms → cellular organisms → Bacteria1482Open in IMG/M
3300025918|Ga0207662_10211954All Organisms → cellular organisms → Bacteria1258Open in IMG/M
3300025922|Ga0207646_10081910All Organisms → cellular organisms → Bacteria2886Open in IMG/M
3300026121|Ga0207683_10744432All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300027857|Ga0209166_10039357All Organisms → cellular organisms → Bacteria2821Open in IMG/M
3300027869|Ga0209579_10000884All Organisms → cellular organisms → Bacteria26717Open in IMG/M
3300027869|Ga0209579_10628157All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300027909|Ga0209382_11279728All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300031421|Ga0308194_10215391All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300031538|Ga0310888_10969649All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300031562|Ga0310886_10764117All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300031576|Ga0247727_10058828All Organisms → cellular organisms → Bacteria4543Open in IMG/M
3300031576|Ga0247727_10095968All Organisms → cellular organisms → Bacteria3150Open in IMG/M
3300031716|Ga0310813_10003408All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria9658Open in IMG/M
3300031716|Ga0310813_10142749All Organisms → cellular organisms → Bacteria1917Open in IMG/M
3300031716|Ga0310813_10202174All Organisms → cellular organisms → Bacteria1629Open in IMG/M
3300031716|Ga0310813_10249018All Organisms → cellular organisms → Bacteria1478Open in IMG/M
3300031720|Ga0307469_12274799All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300031731|Ga0307405_11425045All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300031754|Ga0307475_10097925All Organisms → cellular organisms → Bacteria2285Open in IMG/M
3300031820|Ga0307473_11051915All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300031944|Ga0310884_10772624All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300032002|Ga0307416_102921190All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300032126|Ga0307415_102447499All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300032163|Ga0315281_10130246All Organisms → cellular organisms → Bacteria2877Open in IMG/M
3300032205|Ga0307472_102632477All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300032261|Ga0306920_102435077All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300032261|Ga0306920_103240415All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300032421|Ga0310812_10000510All Organisms → cellular organisms → Bacteria14628Open in IMG/M
3300032421|Ga0310812_10186002Not Available896Open in IMG/M
3300033412|Ga0310810_11048434All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300033416|Ga0316622_102567481All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300033805|Ga0314864_0097253All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300034820|Ga0373959_0027759All Organisms → cellular organisms → Bacteria1126Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.28%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil7.48%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.48%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil6.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.54%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.54%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil5.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.74%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.74%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere3.74%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater2.80%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)2.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.80%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.80%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment1.87%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.87%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.87%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.87%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm1.87%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.93%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.93%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.93%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.93%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.93%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.93%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009527Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold CreekEnvironmentalOpen in IMG/M
3300009597Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299EnvironmentalOpen in IMG/M
3300009678Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011403Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300019880Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1EnvironmentalOpen in IMG/M
3300020202Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300022549Cold Creek_combined assemblyEnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025311Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031576Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033805Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10EnvironmentalOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10171994653300000364SoilMDPTQLPEHTAICKHCKQPVSWATLVRSDREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD*
INPhiseqgaiiFebDRAFT_10172180313300000364SoilMPEPPLPEGTATCKCCRKAVSWENVVRLERELQPRVFERAYICPHCRAVLEFASWQTGVSRKD*
INPhiseqgaiiFebDRAFT_10172234123300000364SoilMPEPPLPEGTATCKCCRKAVSWENVVRLERELQPRVFERAYICPHCRAVLEFASWQTGVSRRD*
INPhiseqgaiiFebDRAFT_10172250423300000364SoilRIGPAGTIGGMDPARLPEHTAVCKLCKKPVSWDNLVRSEREIQPRVFERAYICPYCRAVLEFASWQTGVSRKD*
JGI1027J11758_1234460223300000789SoilCLPRIGPAGTIGGMDPARLPEHTAVCKLCKKPVSWDNLVRSEREIQPRVFERAXXCPYCRAVLXFASWQTGVSRKD*
JGI10214J12806_1078080623300000891SoilVADLPLPEGTTRCKSCRKPVSWDNLVRTEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD*
soilH1_1030973843300003321Sugarcane Root And Bulk SoilMDPSRLPEHVAVCKCCKQPVSWENLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD*
Ga0063356_10147891823300004463Arabidopsis Thaliana RhizosphereMTHPALPEGTSTCKSCRKPVSWENLIRLERELQPRVFERAYVCPHCRAVLEFATWQTGVSRRD*
Ga0063356_10257787323300004463Arabidopsis Thaliana RhizosphereMSARRDDRSICKACKKPVDWDNIVRIDREIQPRVFERAYVCPHCRAVLEFSSWQTGVSRKD*
Ga0063356_10381715523300004463Arabidopsis Thaliana RhizosphereMCGGDSIILSPVSPLPENTAVCKCCRKPISWENLIRLDREIQPRVFERAYICPHCRAVLEFASWQTGVSRRD*
Ga0063356_10551412613300004463Arabidopsis Thaliana RhizosphereRLRRPMTRGEGRPTCRACKKPVDWDNLVRVDREISPRVFERAYVCPHCRAVLEFGSWQTGVSRKD*
Ga0066388_10790052613300005332Tropical Forest SoilMPEAPRGDEGPVCRFCHKPVDWSNVRRDTREIQPRVFECAYFCPHCRAVLEFASWQTGVSRKD*
Ga0070687_10018484923300005343Switchgrass RhizosphereMPEPELPDAAICKCCRKAVSWENLVRLQREIQPRVFERAYVCPHCRAVLEFASWQTGVSRRD*
Ga0070705_10033164823300005440Corn, Switchgrass And Miscanthus RhizosphereVADLPLPDNAAVCKSCKKPVSWDNLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD*
Ga0070694_10103586023300005444Corn, Switchgrass And Miscanthus RhizosphereMDARYPEGTAICKACKKPVSWANLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD*
Ga0070707_10009013223300005468Corn, Switchgrass And Miscanthus RhizosphereFREVGCVILSPMDPSRLPDHTAVCKCCKGPVSWENLLRSEREIQPRVFERAYLCPHCRAVLEFASWQTGVSRKD*
Ga0070698_10054302623300005471Corn, Switchgrass And Miscanthus RhizosphereMDPSRLPDHTAVCKCCKGPVSWENLLRSEREIQPRVFERAYLCPHCRAVLEFASWQTGVSRKD*
Ga0070741_1057078923300005529Surface SoilMEPSRLPEHTAVCKACKRPVSWDNLARSEREIQPRVFERAYICPHCRAVLEFASWQTGISRKD*
Ga0070697_10043572823300005536Corn, Switchgrass And Miscanthus RhizosphereMDPTRLPDQTAVCKCCKQPVSWDNVVRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD*
Ga0070697_10197425523300005536Corn, Switchgrass And Miscanthus RhizosphereLPDGTAVCKCCKKPVSWENLVRVEQEIQPRVFERAYICPYCRAVLEFASWQTGVSRKD*
Ga0070730_1009248133300005537Surface SoilMDPVRLPDHTAVCKHCKKPVSWENLVRSEREIQHRVFERAYICPHCRAVLEFASWQTGISRKD*
Ga0070731_1000980253300005538Surface SoilMDPTRLPEHAAVCKHCKKPVSWENLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGISRKD*
Ga0070731_1060306023300005538Surface SoilMDPARLPEHTAVCKLCKKPVSWDNMVRSEREIQPRVFERAYICPHCRAVLEFASWQTGISRKD*
Ga0070732_1060854923300005542Surface SoilMGDMDPVRLPDHSAVCKNCKKPVSWDNLVRSEREIQRRVFERAYICPHCRAVLEFASWQTGISRKD*
Ga0070702_10160432013300005615Corn, Switchgrass And Miscanthus RhizosphereDNAAVCKSCKKPVSWDNLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD*
Ga0074479_1077249913300005829Sediment (Intertidal)NGSMPDEPYSIGRSVCRSCRKPVDWSNVRRDTREIQPRVFECAYFCPHCRAVLEFASWQTGISRKD*
Ga0074479_1077355323300005829Sediment (Intertidal)MSVPPPPDSGPSCRHCRKPVDWTNLRRDTREVQPHVFECVYFCPHCRGILEFASWQTGVSRKD*
Ga0074470_10998373333300005836Sediment (Intertidal)MDAPGLPENTAVCKNCRKPVSWESLLRVQREIQPRVFECAYLCPHCRAVLEFASWQTGISRKD*
Ga0066653_1019184633300006791SoilMDPTQLPEHTAICKFCKQPVSWANLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD*
Ga0075428_10013640523300006844Populus RhizosphereMDPDPPAVCKSCRKPVSWENLIRLDREIQPRVFERAYICPHCRAVLEFASWQTGVSRGLTRP*
Ga0075428_10096808923300006844Populus RhizosphereVAELPLREGVSICKCCKKTVSWENLVRQEREIQPHVFERAYVCPHCRAVLEFATWQTGISRKD*
Ga0075433_1038522533300006852Populus RhizosphereVNDVHLPDGTAVCKCCKKPVSWENLVRVEQEIQPRVFERAYICPHCRAVLEFASWQTGVSRKD*
Ga0073934_1011275943300006865Hot Spring SedimentMSAPRREGRSICKACKKPVDWENVLRSDREIQPRVFERAYICPHCRAVLEFSSWQTGVSRRD*
Ga0079215_1049779413300006894Agricultural SoilMSARRDERSVCKACKKPVDWDNIVRIDREIHPRVFERAYVCPHCRAVLEFSSWQTG
Ga0111539_1053709013300009094Populus RhizosphereVNPLPESTAICKSCRKPISWENLIRSDREIQPRVFERAYICPHCRAVLEFASWQTGVSRRD*
Ga0111539_1350217613300009094Populus RhizosphereMDPTRLPENAAVCKNCKEPVSWDILIRSQREIQPRVFECAYICPYCRAVLEFASWQTGVSRKD*
Ga0111538_1150181123300009156Populus RhizosphereGRRGFFVAPLGLDVRRAFDHTVPVNPMPESTAICKSCRKPISWENLVRSDREIQPRVFERAYICPHCRAVLEFASWQTGVSRRD*
Ga0105092_1010017813300009157Freshwater SedimentMSPLPESTAVCKSCRKPISWENLVRSDREIQPRVFERAYICPHCRAVLEFASWQTGVSRRY*
Ga0114942_105237633300009527GroundwaterMSTPRRDDGPVCKACRKPVDWSNVRRLDREIQPRVFERAYVCPHCRAVLEFASWQTGTRRS*
Ga0105259_108435023300009597SoilMDPDQPAVCKSCRKPVSWENLIRLDREIQPRVFERAYICPHCRAVLEFASWQTGVSRGLTRP*
Ga0105259_117394723300009597SoilMTRAEGRPTCRACKKPVDWDNLVRVDREISPRVFERAYVCPHCRAVLEFGSWQTGISRKD
Ga0105252_1011405723300009678SoilMPPRPDGKPVCKACRKPVDWDNMIRSDREISPRVFERAYVCPHCRAILEFASWQTGVSRKS*
Ga0105252_1023491033300009678SoilMDPDQPPVCKSCRKPVSWENLIRLDREIQPRVFERAYICPHCRAVLEFASWQTGVSRRY*
Ga0134062_1069485223300010337Grasslands SoilMDPARLPDHVAICKCCKETVSWDNLVRSEREIQRRVFERAYICPYCRAVLEFASWQTGVSRKD*
Ga0126383_1216043113300010398Tropical Forest SoilMDPTRLPEHTAICKCCKQTVSWDNLVRSEREIQPRVFERAYICPHCRAVQEFASWQTGVSRKD*
Ga0134127_1002193923300010399Terrestrial SoilVAELPLREGVSICKCCKKTVSWENLVRLEREIQPRVFERAYVCPHCRAVLEFATWQTGISRKY*
Ga0134122_1004543413300010400Terrestrial SoilVADLPLPDNAAVCKSCKKPVSWDNLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGV
Ga0134122_1022579723300010400Terrestrial SoilVAVCKLCKKAISWDNLQWSEREIQPRVFERAYICPYCRAVLEFASWQTGVSRKD*
Ga0134122_1102619833300010400Terrestrial SoilMDASRLPEQTAVCKACQEPVTWQTLVRSMREIQPRVFECAYICPHCRAVLEFASWQTGVSRKD*
Ga0134122_1128036513300010400Terrestrial SoilVADLPYPEGAASCKSCRKPVSWENLLRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD*
Ga0134122_1237764213300010400Terrestrial SoilMDAPRLPEDHSTCKSCRKTVSWQNVARSVREIQPRVFECAYICPHCRAILEFASWQTGVSRKY*
Ga0134123_1009356623300010403Terrestrial SoilMDARYPEGTAICKACKKPVSWANLVRSEREIQPRVFERAYICPYCRAVLEFASWQTGVSRKD*
Ga0150983_1259389523300011120Forest SoilGMDPSRLPDHTAVCKHCKKPVSWDNLVRSEREIQYRVFERAYICPHCRSVLEFASWQTGISRKD*
Ga0137313_109733723300011403SoilVNPLPESTAVCKSCRKPISWENLVRSDREIQPRVFERAYVCPHCRAVLEFGSWQTGISRKD*
Ga0137427_1033787713300011445SoilMDPDQPAVCKSCRKPVSWENLIRLDREIQPRVFERAYICPHCRAVLEFASWQTGVSRRY*
Ga0137410_10000245243300012944Vadose Zone SoilMDPTRLPENTAVCKLCKKPVSWENLVRSEREIQRRVFERAYICPYCRAVMEFASWQTGVSRKD*
Ga0126369_1139809233300012971Tropical Forest SoilMPEPDLPEGTALCKCCKKSVSWEILVRQQREFQPRVFECAYICPHCRAVLEFASWQTGISRRD*
Ga0157378_1306772513300013297Miscanthus RhizosphereSLMDPGRLPDHVAVCKCCKQPVSWENLVRSEREIQPRVFERAYISPHCRAVLEFASWQTGVSRKD*
Ga0137411_113981833300015052Vadose Zone SoilMDPTRLPENTAVCKLCKKPVSWENLVRSEREIQRRVFERAYICPYCRAVMEFASWQTG
Ga0182041_1112106513300016294SoilMEPARLPDHVAICKCCKQQVSWDNVVRSEREIQPRVFERAYICPHCRAVLEFASWQ
Ga0182037_1211872113300016404SoilMDPTRLPENTAVCKACKLPVSWDNLARSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD
Ga0187778_1000523333300017961Tropical PeatlandMPEVPPAPDGPVCRFCQKPVDWSNVRRDTREVHARVFECAYFCPYCRAVLEFASWQTGVTRKD
Ga0190266_1003029423300017965SoilMDPTRLPEGTAVCKNCKLPVSWENLVRSDREIQTRVFERAYICPHCRAVLEFASWQTGVSRKKY
Ga0187773_1045632223300018064Tropical PeatlandMDPSRLPEHTAICKLCKKPVSWENLVRSEREIQPRVFERAYICPYCRAVMEFASWQTGISRKD
Ga0190274_1181672123300018476SoilMDPTRLPEGTAVCKNCKMPVSWANLVRSDREIQTRVFERAYICPHCRAVLEFASWQTGVSRKKY
Ga0187892_1001409323300019458Bio-OozeMTPSHPRDDRGPLCRHCHKLVDWTNILRSDREIQPNVFERVYSCPHCRAVLEFASWQTGTSRRH
Ga0193712_111458413300019880SoilPAGKPAGAFLLRRVPPAGRMGGMDPSRLPEHTAVCKNCKKPVSWDNLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD
Ga0196964_1019153313300020202SoilMTAPRRDGRSICKACKKPVDWENIVRLDREVQPRVFERAYVCPHCRAILEFSSWQTGVSRRD
Ga0210407_1123327413300020579SoilMLDAPSLPSDNTPMDDPRLPEHSAVCKACKGQVSWENLVRSEREIQPRVFERAYICPHCRSVLEFASWQTGISRKD
Ga0213876_1015861723300021384Plant RootsMDPARLPEHTAVCKNCKKPVSWDNLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGISRKD
Ga0210384_1010228313300021432SoilMPDEPLADGGPLCRFCRKPVDWSNVRRDTREVLPRVFECAYFCPHCRAVLEFASWQTGVSRKD
Ga0212091_1011780233300022549GroundwaterMSTPRRDDGPVCKACRKPVDWSNVRRLDREIQPRVFERAYVCPHCRAVLEFASWQTGTRR
Ga0209172_1016123713300025310Hot Spring SedimentMSAPRREGRSICKACKKPVDWENVLRSDREIQPRVFERAYICPHCRAVL
Ga0209343_1020224333300025311GroundwaterMPSAAPRPDDPLCRHCRKPVDWTTLRRDVREAQPHVFECVYYCPHCRGILEFASWQTGVSRRD
Ga0207662_1021195433300025918Switchgrass RhizosphereMPEPELPDAAICKCCRKAVSWENLVRLQREIQPRVFERAYVCPHCRAVLEFASWQTGVSRRD
Ga0207646_1008191023300025922Corn, Switchgrass And Miscanthus RhizosphereMDPSRLPDHTAVCKCCKGPVSWENLLRSEREIQPRVFERAYLCPHCRAVLEFASWQTGVSRKD
Ga0207683_1074443223300026121Miscanthus RhizosphereMDPTRLPENAAVCKHCKEPVSWDILIRSQREIQPRVFECAYICPYCRAVLEFASWQTGVSRKY
Ga0209166_1003935723300027857Surface SoilMDPVRLPDHTAVCKHCKKPVSWENLVRSEREIQHRVFERAYICPHCRAVLEFASWQTGISRKD
Ga0209579_10000884223300027869Surface SoilMDPTRLPEHAAVCKHCKKPVSWENLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGISRKD
Ga0209579_1062815723300027869Surface SoilMDPARLPEHTAVCKLCKKPVSWDNMVRSEREIQPRVFERAYICPHCRAVLEFASWQTGISRKD
Ga0209382_1127972833300027909Populus RhizosphereMDPDQPAVCKSCRKPVSWENLIRLDREIQPRVFERAYICPHCRAVLEFASWQTGVSRGLTRP
Ga0308194_1021539123300031421SoilLPRVLPTGTIGAMDPTRLPEHTAVCKHCKKPVSWDNLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD
Ga0310888_1096964923300031538SoilPAFDHTVPVNPLPESTAVCKSCRKPISWENLVRSDREIQPRVFERAYICPHCRAVLEFASWQTGVSRRD
Ga0310886_1076411713300031562SoilFFVAHLGLDARPAFDHTVPVNPLPESTAICKSCRKPISWENLIRSDREIQPRVFERAYICPHCRAVLEFASWQTGVSRRD
Ga0247727_1005882823300031576BiofilmMSQSRRRTDDALCRSCKKDVSWENLRRVDREVQPRVFERAYVCPHCRAVLEFASWQTGVSRRD
Ga0247727_1009596833300031576BiofilmMPSAAPRPDGPLCRHCRKPVDWTSVRRDVREAQPRVFECVYFCPHCRGVLEFASWQTGVSRRD
Ga0310813_1000340833300031716SoilVADLPLPDNAAVCKSCKKPVSWDNLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD
Ga0310813_1014274923300031716SoilMDPGRLPDHVAVCKCCKQPVSWDNLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD
Ga0310813_1020217443300031716SoilMDPTHLPEHVAICKCCKEPVSWENLVRSEREIQPRVFERAYICPYCRAVLEFASWQTGVSRRD
Ga0310813_1024901813300031716SoilMPPMPEPQLPEGSAICKCCRKPVSWENLVRLQREIQPRVFERAYVCPHCRAVLEFATWQTGVSRRD
Ga0307469_1227479913300031720Hardwood Forest SoilDDYGPILDTWLMDPSRLPDQTAVCKCCKLPVSWDNVVRSEREIQPRVFECAYICPHCRAVLEFASWQTGVSRKD
Ga0307405_1142504523300031731RhizospherePLCRSCRKPADWENLVRVDREIVPRVFERAYVCPHCRAVLEFASWQTGISRKD
Ga0307475_1009792523300031754Hardwood Forest SoilMGGMDPVRLPDHSAVCKNCKKPVSWDNLVRSEREIQRRVFERAYICPHCRAVLEFASWQTGISRKD
Ga0307473_1105191523300031820Hardwood Forest SoilRLPEDAAICKACKQVVTWSNLVRSQREIQPRVFECAYICPHCRAVLEFASWQTGVSRKD
Ga0310884_1077262423300031944SoilMTPAESRPTCKACKKPVDWDNLLRVDREIHPRVFERAYVCPHCRAVLEFGSWQTGISRKD
Ga0307416_10292119013300032002RhizosphereVNPLPESTAVCKSCRKPISWENLVRIDREIQPRVFERAYICPHCRAVLEFASWQTGVSRR
Ga0307415_10244749923300032126RhizosphereMSARHDERSICKACKKPVDWVNIVRVDREIHPHVFERAYVCPHCRVVLEFASWQTGISRK
Ga0315281_1013024623300032163SedimentMDVSRLPEGVAVCKACKLAVSWENLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGISRKD
Ga0307472_10263247723300032205Hardwood Forest SoilMEPRRLPEDAAICKACKQVVTWSNLVRSQREIQPRVFECAYICPHCRAVLEFASWQTGVSRKD
Ga0306920_10243507723300032261SoilALHVDHNPAMNEPGLPEGTAICKSCRKPVSWENVIRQEREIQPRVFERAYICPHCRAVLEFASWQTGISRKN
Ga0306920_10324041513300032261SoilMDPSRLPEHVAICKCCKQPVSWENVVRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD
Ga0310812_1000051023300032421SoilMNLDTSLMDPGRLPDHVAVCKCCKQPVSWDNLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD
Ga0310812_1018600213300032421SoilRPGSAHNASVADLPLPDNAAVCKSCKKPVSWDNLVRSEREIQPRVFERAYICPHCRAVLEFASWQTGVSRKD
Ga0310810_1104843413300033412SoilMPEPQLPEGSAICKCCRKPVSWENLVRLQREIQPRVFERAYVCPHCRAVLEFATWQTGVSRRD
Ga0316622_10256748123300033416SoilMTREPSKSQCRCKSCKKPVDWSNLIRVDREVQPAVFERAYVCPHCRAVLEFSSWQTGRSKKR
Ga0314864_0097253_507_7163300033805PeatlandRRKDIHVPDAPYSEGQAVCRFCRKPVDWTNVRRDTREIQPRVFECAYFCPYCRAVLEFASWQTGISRKD
Ga0373959_0027759_668_8593300034820Rhizosphere SoilMTEPQLPEGSAICKCCRKTVSWENLVRLQREIQPRVFERAYVCPHCRAVLEFATWQTGVSRRD

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.