NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F091745

Metagenome Family F091745

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F091745
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 58 residues
Representative Sequence MTVEQSELEREMVPIVDRCFRGCGTRAVLSDGTSNFCAECALTILKAEARRLPGLAA
Number of Associated Samples 83
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 74.77 %
% of genes near scaffold ends (potentially truncated) 25.23 %
% of genes from short scaffolds (< 2000 bps) 77.57 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (93.458 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(36.449 % of family members)
Environment Ontology (ENVO) Unclassified
(51.402 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.879 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.71%    β-sheet: 7.06%    Coil/Unstructured: 68.24%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF07332Phage_holin_3_6 16.82
PF03006HlyIII 10.28
PF00501AMP-binding 6.54
PF13376OmdA 4.67
PF00275EPSP_synthase 4.67
PF01326PPDK_N 4.67
PF02153PDH_N 4.67
PF01168Ala_racemase_N 3.74
PF14300DUF4375 3.74
PF00005ABC_tran 3.74
PF04167DUF402 1.87
PF00664ABC_membrane 1.87
PF14691Fer4_20 1.87
PF00860Xan_ur_permease 0.93
PF13248zf-ribbon_3 0.93
PF04075F420H2_quin_red 0.93
PF03129HGTP_anticodon 0.93
PF08818DUF1801 0.93
PF07931CPT 0.93
PF02565RecO_C 0.93
PF01119DNA_mis_repair 0.93
PF07883Cupin_2 0.93
PF13193AMP-binding_C 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG1272Predicted membrane channel-forming protein YqfA, hemolysin III familyIntracellular trafficking, secretion, and vesicular transport [U] 10.28
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 4.67
COG0574Phosphoenolpyruvate synthase/pyruvate phosphate dikinaseCarbohydrate transport and metabolism [G] 4.67
COG0124Histidyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.93
COG0323DNA mismatch repair ATPase MutLReplication, recombination and repair [L] 0.93
COG0423Glycyl-tRNA synthetase, class IITranslation, ribosomal structure and biogenesis [J] 0.93
COG0441Threonyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.93
COG0442Prolyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.93
COG1381Recombinational DNA repair protein RecO (RecF pathway)Replication, recombination and repair [L] 0.93
COG3896Chloramphenicol 3-O-phosphotransferaseDefense mechanisms [V] 0.93
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 0.93
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 0.93
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.46 %
UnclassifiedrootN/A6.54 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002911|JGI25390J43892_10106295All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium633Open in IMG/M
3300005166|Ga0066674_10005826All Organisms → cellular organisms → Bacteria4857Open in IMG/M
3300005166|Ga0066674_10035572All Organisms → cellular organisms → Bacteria2217Open in IMG/M
3300005167|Ga0066672_10096553All Organisms → cellular organisms → Bacteria1796Open in IMG/M
3300005167|Ga0066672_10131947All Organisms → cellular organisms → Bacteria → Terrabacteria group1553Open in IMG/M
3300005167|Ga0066672_10410794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium886Open in IMG/M
3300005171|Ga0066677_10033212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2487Open in IMG/M
3300005171|Ga0066677_10456314All Organisms → cellular organisms → Bacteria → Terrabacteria group732Open in IMG/M
3300005172|Ga0066683_10456328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi783Open in IMG/M
3300005175|Ga0066673_10193773All Organisms → cellular organisms → Bacteria → Terrabacteria group1156Open in IMG/M
3300005176|Ga0066679_10154445All Organisms → cellular organisms → Bacteria1439Open in IMG/M
3300005176|Ga0066679_10160700All Organisms → cellular organisms → Bacteria1413Open in IMG/M
3300005178|Ga0066688_10051728All Organisms → cellular organisms → Bacteria2379Open in IMG/M
3300005186|Ga0066676_10553366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium780Open in IMG/M
3300005444|Ga0070694_100129343All Organisms → cellular organisms → Bacteria1822Open in IMG/M
3300005445|Ga0070708_100027744All Organisms → cellular organisms → Bacteria4862Open in IMG/M
3300005446|Ga0066686_10075384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2123Open in IMG/M
3300005446|Ga0066686_10256912All Organisms → cellular organisms → Bacteria1180Open in IMG/M
3300005446|Ga0066686_10718227All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium673Open in IMG/M
3300005447|Ga0066689_10969438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi524Open in IMG/M
3300005451|Ga0066681_10003692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6752Open in IMG/M
3300005468|Ga0070707_101558945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium627Open in IMG/M
3300005518|Ga0070699_100235923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1631Open in IMG/M
3300005553|Ga0066695_10422570Not Available824Open in IMG/M
3300005554|Ga0066661_10032214All Organisms → cellular organisms → Bacteria2903Open in IMG/M
3300005555|Ga0066692_10380574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium895Open in IMG/M
3300005557|Ga0066704_10062475All Organisms → cellular organisms → Bacteria2378Open in IMG/M
3300005557|Ga0066704_10736570Not Available618Open in IMG/M
3300005558|Ga0066698_10218831All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1307Open in IMG/M
3300005566|Ga0066693_10289659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales653Open in IMG/M
3300005568|Ga0066703_10107751All Organisms → cellular organisms → Bacteria1644Open in IMG/M
3300005568|Ga0066703_10282721All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1005Open in IMG/M
3300005568|Ga0066703_10477716Not Available743Open in IMG/M
3300005575|Ga0066702_10635952All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium638Open in IMG/M
3300005576|Ga0066708_10387791All Organisms → cellular organisms → Bacteria → Terrabacteria group897Open in IMG/M
3300005586|Ga0066691_10408161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi808Open in IMG/M
3300005598|Ga0066706_10237636All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1414Open in IMG/M
3300005598|Ga0066706_10562218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium906Open in IMG/M
3300006794|Ga0066658_10101224All Organisms → cellular organisms → Bacteria1365Open in IMG/M
3300006796|Ga0066665_11397577Not Available541Open in IMG/M
3300006854|Ga0075425_100162705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2561Open in IMG/M
3300006854|Ga0075425_100418923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1543Open in IMG/M
3300006904|Ga0075424_102120801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi592Open in IMG/M
3300007076|Ga0075435_101946822All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300007258|Ga0099793_10412513All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300009012|Ga0066710_100201653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2833Open in IMG/M
3300009012|Ga0066710_102283667All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300009088|Ga0099830_10706637All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300009088|Ga0099830_11432193All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi575Open in IMG/M
3300009089|Ga0099828_11166602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi683Open in IMG/M
3300009137|Ga0066709_101618758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium925Open in IMG/M
3300009137|Ga0066709_102050696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi791Open in IMG/M
3300009137|Ga0066709_103066055All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium612Open in IMG/M
3300009143|Ga0099792_10305476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium946Open in IMG/M
3300009162|Ga0075423_10765741All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300010301|Ga0134070_10460841All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi510Open in IMG/M
3300010333|Ga0134080_10633288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium524Open in IMG/M
3300012096|Ga0137389_10552563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi989Open in IMG/M
3300012198|Ga0137364_11450662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi506Open in IMG/M
3300012203|Ga0137399_10023847All Organisms → cellular organisms → Bacteria4071Open in IMG/M
3300012203|Ga0137399_10095796All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2285Open in IMG/M
3300012203|Ga0137399_10173857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1735Open in IMG/M
3300012206|Ga0137380_10014233All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi7254Open in IMG/M
3300012207|Ga0137381_10164103All Organisms → cellular organisms → Bacteria1916Open in IMG/M
3300012208|Ga0137376_10095306All Organisms → cellular organisms → Bacteria2515Open in IMG/M
3300012208|Ga0137376_10110382All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2339Open in IMG/M
3300012208|Ga0137376_10368138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1248Open in IMG/M
3300012209|Ga0137379_10511203All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1109Open in IMG/M
3300012363|Ga0137390_10795776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium903Open in IMG/M
3300012582|Ga0137358_10764229All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300012922|Ga0137394_10046199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium3582Open in IMG/M
3300012925|Ga0137419_10237245All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1368Open in IMG/M
3300012925|Ga0137419_11167489All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300012927|Ga0137416_11714237All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300015359|Ga0134085_10308232All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300017656|Ga0134112_10471898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium528Open in IMG/M
3300017997|Ga0184610_1142486All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300018027|Ga0184605_10010542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3517Open in IMG/M
3300018027|Ga0184605_10439502All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium577Open in IMG/M
3300018028|Ga0184608_10005002All Organisms → cellular organisms → Bacteria4251Open in IMG/M
3300018468|Ga0066662_12356343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium560Open in IMG/M
3300018482|Ga0066669_10272412All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1354Open in IMG/M
3300019878|Ga0193715_1023325All Organisms → cellular organisms → Bacteria1344Open in IMG/M
3300019885|Ga0193747_1004066All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium3591Open in IMG/M
3300020022|Ga0193733_1046522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1225Open in IMG/M
3300021080|Ga0210382_10023069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2268Open in IMG/M
3300021344|Ga0193719_10116582All Organisms → cellular organisms → Bacteria1161Open in IMG/M
3300025910|Ga0207684_10206347All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1695Open in IMG/M
3300025922|Ga0207646_10423073Not Available1202Open in IMG/M
3300025922|Ga0207646_11425371All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium602Open in IMG/M
3300026295|Ga0209234_1039600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1793Open in IMG/M
3300026296|Ga0209235_1166815All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300026300|Ga0209027_1003092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi6285Open in IMG/M
3300026301|Ga0209238_1131243Not Available809Open in IMG/M
3300026305|Ga0209688_1011564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1668Open in IMG/M
3300026307|Ga0209469_1015404All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2769Open in IMG/M
3300026312|Ga0209153_1052711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1446Open in IMG/M
3300026315|Ga0209686_1100277Not Available1005Open in IMG/M
3300026317|Ga0209154_1180693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium842Open in IMG/M
3300026325|Ga0209152_10419327All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium530Open in IMG/M
3300026536|Ga0209058_1211104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium777Open in IMG/M
3300026538|Ga0209056_10054345All Organisms → cellular organisms → Bacteria3557Open in IMG/M
3300028047|Ga0209526_10934227All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300028793|Ga0307299_10355627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium549Open in IMG/M
3300028828|Ga0307312_10238536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1174Open in IMG/M
3300028828|Ga0307312_10299029All Organisms → cellular organisms → Bacteria1048Open in IMG/M
3300032180|Ga0307471_101963970All Organisms → cellular organisms → Bacteria733Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil36.45%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil20.56%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil11.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.54%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.54%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.67%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.74%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.74%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.74%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25390J43892_1010629513300002911Grasslands SoilMTIEPSELEPEMVPIVNRCYRGCGTRAVLVDGFSAFCAKCALVMLEAEVVRRSKLAA*
Ga0066674_1000582653300005166SoilMMIERTEQEREMVPIVDRCFKGCGTRAVLSDGFSNFCAKCALAVLKAEATRPPALAA*
Ga0066674_1003557223300005166SoilMTVEQSELEREMVPIVDRCFRGCGTRAVLSDGISKFCAECALTILKAEARRLPGLAA*
Ga0066672_1009655333300005167SoilMTVEQSELEREMVPIVDRCFRGCGTRAVLSDGTSNFCAECALTILKAEARRLPGLAA*
Ga0066672_1013194713300005167SoilMTIEQTELDREMVPIAERCFRGCGTRAVIVDDFSAFCANCALAMLKAEALRLARLAA*
Ga0066672_1041079413300005167SoilMTVEQTELEREMVPIVDRCFRGCGTRAVLSHGISKFCAECALTILKAEARRLPGLPA*
Ga0066677_1003321243300005171SoilMMIERTEQEREVVPIVDRCFKGCGTRAVLSDGFSNFCAKCALAVLKAEATRLPALAA*
Ga0066677_1045631423300005171SoilMMELEQNEIERQMVPIADRCFRGCGTRAVVVKGFSAFCANCALALLQAEAKQLSSLAA*
Ga0066683_1045632813300005172SoilMTMEQTELDREMVPIADRCFRGCGTRAVFVDGFSAFCASCALAMLKAGAMRVPRLAA*
Ga0066673_1019377323300005175SoilMIELEQNEIERQVVPIADRCFRGCGTRAVVVKGFSAFCANCALALLRAEAKQLSSRAA*
Ga0066679_1015444513300005176SoilMTTDERDREPEMVPIVDRCFRGCGTRAVISDGPSNFCAKCALALLRAQALLS
Ga0066679_1016070023300005176SoilMTIEQGELEREVVPIAARCFRGCGRRAVLSDGFSNFCATCALAILKSEATRLPRLAA*
Ga0066688_1005172823300005178SoilMTIEPSELEPEMVPIVNRCYRGCGTRAVLVDGFSAFCAKCALAMLEAEVVRRSKLAA*
Ga0066676_1055336623300005186SoilMTIEQTELEREMVPIAERCFRGCGTRAVLVEGFSAFCAKCSLALLQAKVIQAPRLAA*
Ga0070694_10012934323300005444Corn, Switchgrass And Miscanthus RhizosphereMTTDESDLEREMVPIADRCFRGCGTRAVLSDGPSNFCARCALAILKAESFRFPRLAA*
Ga0070708_10002774423300005445Corn, Switchgrass And Miscanthus RhizosphereMARSWLEGFGDRMAIEQRELDREMVPIVDRCFRGCGTRAVLSDGFSNFCAKCALAVLKAEAARLPAIAA*
Ga0066686_1007538443300005446SoilMTMEQSELERQMVPIADRCFRGCGTRAVMVDSFSAYCAKCSLALLKAEVIRASTLAA*
Ga0066686_1025691233300005446SoilMTMEQTELDREIVPIADRCFRGCGTRAVFVDGFSAFCASCALAILKAEVRRAPRLAA*
Ga0066686_1071822713300005446SoilLGDNMTIEQSELEREMVPIAERCFRGCGTRAVLVEGFSAYCAKCSLALLQAKVIQAPRLAA*
Ga0066689_1096943813300005447SoilMTMEQTELDREMVPIADRCFRGCGTRAVFVDGFSAFCASCALAMLKAG
Ga0066681_1000369283300005451SoilKPLNRFGDDRMTVEQSELEREMVPIVDRCFRGCGTRAVLSDGISKFCAECALTILKAEARRLPGLAA*
Ga0070707_10155894523300005468Corn, Switchgrass And Miscanthus RhizosphereMARSWLEGFGDWMAIEQRELEREMVPIVDRCFRGCGTRAVLSDGFSNFCAKCALAVLKAEAARLPAIAA*
Ga0070699_10023592323300005518Corn, Switchgrass And Miscanthus RhizosphereMARSWLEGFGDRMAIEQRELEREMVPIVDRCFRGCGTRAVLSDGFSNFCAKCALAVLKAEAARLPAIAA*
Ga0066695_1042257013300005553SoilVWVGCISGDEMTMEQTELDREMVPIADRCFRGCGTRAVFVDGFSAFCASCALAMLKAGAMRVPRLAA*
Ga0066661_1003221433300005554SoilQVRWKCEFGDDMTIEPSELEPEMVPIVNRCYRGCGTRAVLVDGFSAFCAKCALAMLEAEVVRRSKLAA*
Ga0066692_1038057423300005555SoilMTIEQGELEREVVPIAARCFRGCGRRAVLSDGFSNFCATCALAILKSEATRLPRLA
Ga0066704_1006247533300005557SoilMTIEPSELEPEMVPIVNRCYRGCGTRAVLVDGSSAFCAKCALVMLEAEVVRRSKLAA*
Ga0066704_1073657013300005557SoilRMTVEQSELEREMVPIVDRCFRGCGTRAVLSDGTSNFCAECALTILKAEARRLPGLAA*
Ga0066698_1021883133300005558SoilMTIEQGELEREMVPIAERCFRGCGTRAVLVEGFSAYCAKCSLALLQAKVIQAPRLAA*
Ga0066693_1028965923300005566SoilMIELEQNEIERQMVPIADRCFRGCGTRAVVVKGFSAFCANCALALLQAEAKQLSSLAA*
Ga0066703_1010775113300005568SoilQVRWKCEFGDDMTIEPSELEPEMVPIVNRCYRGCGTRAVLVDGFSAFCAKCALVMLEAEVVRRSKLAA*
Ga0066703_1028272123300005568SoilMTTDERDREPEMVPIVDRCFRGCGTRAVISDGPSNFCAKCALALLRAQALLSSRLAA*
Ga0066703_1047771623300005568SoilCFGGKMTIEQGELEREVVPIAARCFRGCGRRAVLSDGFSNFCATCALAILKSEATRLPRLAA*
Ga0066702_1063595213300005575SoilMTVEQSELEREMVPIVDRCFRGCGTRAVFSDGISNFCAECALTILKAEARRLPGLAA*
Ga0066708_1038779123300005576SoilMIELEQNEIERQVVPIADRCFRGCGTRAVVVKGFSAFCANCALALLQAEAKQLSSRAA*
Ga0066691_1040816123300005586SoilMTMEQTELDREMVPIADRCFRGCGTRAVFVDGFSAFCASCALAILKAGAMRVPRLAA*
Ga0066706_1023763623300005598SoilMTMEQTELDREMVPIADRCFRGCGTRAVFVDGFSAFCASCALAILKAEGMRVPRLAA*
Ga0066706_1056221823300005598SoilMTAEQSELDREMVPIVDRCFRGCGTRAVLSDGISKFCAECALTILKAEARRLPGLAA*
Ga0066658_1010122423300006794SoilMTIEPSELEPEMVRIVNRCYRGCGTRAVLVDGFSAFCAKCALVMLEAEVVRRSKLAA*
Ga0066665_1139757713300006796SoilELEREMVPIVDRCFRGCGTRAVLSHGISKFCAECALTILKAEARRLPGLPA*
Ga0075425_10016270553300006854Populus RhizosphereSDLEREMVPIAARCFRGCGTRAVLSDGLSNFCAKCALAILKAESFRFPRLAA*
Ga0075425_10041892323300006854Populus RhizosphereMTTDESDLEREMVPIADRCFRGCGTRAVLSDGLANFCAKCALAILKAESFRVPRLAA*
Ga0075424_10212080123300006904Populus RhizosphereSDLEREMVPIADRCFRGCGTRAVLSDGHANFCAKCALAILKAESFRFPRLAA*
Ga0075435_10194682213300007076Populus RhizosphereMKTDESDLEREMVPIADRCFRGCGTRAVLSEGHANFCAKCALAILKAESFRFPRLAA*
Ga0099793_1041251323300007258Vadose Zone SoilMTVEQIELEREMVPIVVRCYRGCGTRAVVSDGFSSFCAKCALMILKAEAIRLPARAA*
Ga0066710_10020165313300009012Grasslands SoilRQMVPIADRCFRGCGTRAVMVDSFSAYCAKCSLALLKAEVTRASTLAA
Ga0066710_10228366723300009012Grasslands SoilMERFGDVMTIEPGELEREIVPIVDRCYRGCGTRAVVSDGFSSFCAKCALTIFKTEAIRLPGRAA
Ga0099830_1070663723300009088Vadose Zone SoilMTIEQSELEREMVPIADRCFRGCGRRAVMSDGFSNFCAKCALAILKVEAIRLPGLAA*
Ga0099830_1143219323300009088Vadose Zone SoilMTIDETNLDHEVVPIADRCYRGCGTRAVILDGFSAFCANCALGMLKAEARRRLGLAA*
Ga0099828_1116660223300009089Vadose Zone SoilMTIDETNLDHEVVPIADRCYRGCGTRAVILDGFSAFCANCALAMLKAEARRRLGLAA*
Ga0066709_10161875823300009137Grasslands SoilMTVEQSELDREMVPIVDRCFRGCGTRAVLSDGISKFCAECALTILKAEARRLPGLAA*
Ga0066709_10205069623300009137Grasslands SoilMTMEQTELDREMVPIADRCFRGCGTRAVFVDGFSAFCATCALAMLKAGAMRVPRLAA*
Ga0066709_10306605523300009137Grasslands SoilTIEQTELDREMVPIAERCFRGCGTRAVIVDDFSAFCANCALAMLKAEALRLARLAA*
Ga0099792_1030547633300009143Vadose Zone SoilVGGSWLEASEKKMTVEQSELEPEMVPIVDRCFKGCGTRAVLSDGSSRFCAKCALAILKAEATRLPRLAA*
Ga0075423_1076574123300009162Populus RhizosphereMKTDESDLEREMVPIADRCFRGCGTRAVLSDGLANFCAKCALAILKEESFRFPRLAA*
Ga0134070_1046084113300010301Grasslands SoilMTMEQTELDREMVPIADRCFRGCGTRAVFVDGFSAFCASCALAMLKAGA
Ga0134080_1063328823300010333Grasslands SoilMMIERTEQEREMVPIVDRCFKGCGTRAVLSDGFSNFCAKCALAVLKA
Ga0137389_1055256323300012096Vadose Zone SoilMAIEQTELDREMVPIADRCYRGCGTRAVLVAGFSAFCANCALTMLKAEAVPRLGLAA*
Ga0137364_1145066213300012198Vadose Zone SoilMTMEQTELDREMVPIADRCFRGCGTRAVFVDGFSAFCASCALAMLKAGAMRVPRLAA
Ga0137399_1002384733300012203Vadose Zone SoilMMIEQTEREREMVPIVDRCFKGCGTRAVLSDGFSNFCAKCALAILEAEARRLPRLAS*
Ga0137399_1009579623300012203Vadose Zone SoilMIIEQTELEREMVPIADRCYRGCGARAIVVEGCSAFCATCFLTILKAEIIRRSTLAA*
Ga0137399_1017385733300012203Vadose Zone SoilMAIEQSELEVEMVPIADRCYRGCGTRAVLVDRFSAFCAKCALAMLEAEVVRRSTLAA*
Ga0137380_1001423383300012206Vadose Zone SoilMTMEQTELDREMVPIADRCFRGCGNRAVFVDGFSAFCASCALAMLKAGAMRVPRLAA*
Ga0137381_1016410343300012207Vadose Zone SoilMTMEQTELDREMVPIADRCFRGCGNRAVFVDGFSAFCASCALAMLKAGAMRVSRLAA*
Ga0137376_1009530623300012208Vadose Zone SoilMTIEQVELEREMVPIVDRCYRGCGTRAVFSDGLSSFCAKCALAILKTKAIRLPARAA*
Ga0137376_1011038223300012208Vadose Zone SoilMAKSWLECFGDKMAIDQSELEREMVPIVDRCFRGCGTRAVLSDGISNFCAKCALDILKAEPARRLGQAA*
Ga0137376_1036813823300012208Vadose Zone SoilMMELEQNEIERQMVPIADRCFRGCGTRAVVVEGFSAFCAKCALTLLQTEAKQQSSLAA*
Ga0137379_1051120323300012209Vadose Zone SoilMTVEQSELEREMVPIVDRCFRGCGTRAVLSDGISNFCAECALRILKAEARRLPGLAA*
Ga0137390_1079577623300012363Vadose Zone SoilMTTDERDLEREMVPIVDRCFRGCGTRAVFSDGLSNFCAKCALGILKAQAFRSAGLAA*
Ga0137358_1076422923300012582Vadose Zone SoilMTIEQIELEREMVPIVDRCFRGCGTRAVVSDGFSSFCARCALTILKAEAIRLPARAA
Ga0137394_1004619923300012922Vadose Zone SoilMIEQTERDREMVPIVDRCFKGCGTRAVLSEGFSNFCAKCALAILEAEARRLPRLAS*
Ga0137419_1023724523300012925Vadose Zone SoilMMMIEQTEREREMVPIVDRCFKGCGTRAVLSDGFSNFCAKCALAILEAEARRLPRLAS*
Ga0137419_1116748923300012925Vadose Zone SoilMTIEQIELEREMVPIVDRCYRGCGTRAVVSDGFSSFCARCALMILNAEAIRLPARAA*
Ga0137416_1171423713300012927Vadose Zone SoilARSCFGDRMTIEQIELEREMVPIVDRCYRGCGTRAVVSDGFSSFCARCALMILKAEAIRLPARAA*
Ga0134085_1030823223300015359Grasslands SoilMMIERTEQKREMVPIVDRCFKGCGTRAVLSDGFSNFCAKCALAVLKAEATRPPALAA*
Ga0134112_1047189823300017656Grasslands SoilMTIEQSELEREMVPIAERCFRGCGTRAVLVEGFSAFCAKCSLALLKAQVIQASTLAA
Ga0184610_114248613300017997Groundwater SedimentMNTEQSELEREMVPIVDRCFRGCGTRAVFSDGCSNFCAKCALAILTAEAKRLSGLAA
Ga0184605_1001054223300018027Groundwater SedimentMMIEQTELEREMVPIVDRCFKGCGTRAVLSDGFSNFCAKCALGILRAAAKPLPGLAA
Ga0184605_1043950213300018027Groundwater SedimentMMIEQTELEREMVPIVDRCFKGCGTRAVLSDGFSNFCAKCALAILRAAAKPLPGLAA
Ga0184608_1000500233300018028Groundwater SedimentMMIEQTELEREMVPIVDRCFKGCGTRAVLSDGFSNFCARCALAILEAEARRQPRLAA
Ga0066662_1235634313300018468Grasslands SoilMAIEQSELEPEMVPIAARCYRGCGTRAVLTDGFSAFCAKCALTMLEAEVVRRSKLAA
Ga0066669_1027241223300018482Grasslands SoilMAIDQSELEREMVPIVDRCFRGCGTRAVLSDGISNFCAKCALAILKAAPARRLGQAA
Ga0193715_102332513300019878SoilMIELEQNEIERQMVPIPDRCFRGCGTRAVLVKGFSAFCANCALALLQAEAKQLSSLAA
Ga0193747_100406663300019885SoilMMELEQNEIERQMVPIADRCFRGCGTRAVLVKGFSAFCANCALALLQAEAKQLSSLAA
Ga0193733_104652223300020022SoilMMELEQNEVERQMVPIADRCFRGCGTRAVVVKGFSAFCANCALALLQAEAKQLSSLAA
Ga0210382_1002306923300021080Groundwater SedimentMMIEQTELEREMVPIVDRCFRGCGTRAVFSDGCSNFCAKCALAILEAEARRLPRLAA
Ga0193719_1011658233300021344SoilMIELEQNEIERQMVPIADRCFRGCGTRAVLVKGFSAFCANCALALLQAEAKQLSSLAA
Ga0207684_1020634723300025910Corn, Switchgrass And Miscanthus RhizosphereMTTDESDLEREMVPIADRCFRGCGTRAVLSDGPSNFCARCALAILKAESFRFPRLAA
Ga0207646_1042307323300025922Corn, Switchgrass And Miscanthus RhizosphereMARSWLEGFGDWMAIEQRELEREMVPIVDRCFRGCGTRAVLSDGFSNFCAKCALAVLKAEAARLPAIAA
Ga0207646_1142537113300025922Corn, Switchgrass And Miscanthus RhizosphereMARSWLEGFGDRMAIEQRELEREMVPIVDRCFRGCGTRAVLSDGFSNFCAKCALAVLKAE
Ga0209234_103960023300026295Grasslands SoilMTIEPSELEPEMVPIVNRCYRGCGTRAVLVDGSSAFCAKCALVMLEAEVVRRSKLAA
Ga0209235_116681513300026296Grasslands SoilQIELEREMVPIVDRCYRGCGTRAVVSDGFSSFCAKCALAILKTEAIRLPARAA
Ga0209027_100309223300026300Grasslands SoilMTAEQNDLEREIVPIVDRCFRGCGTRAVLSDGMSRFCAKCALEILKAEAMRLPGLAA
Ga0209238_113124323300026301Grasslands SoilGGNKMTAEQNDLEREIVPIVDRCFRGCGTRAVLSDGMSRFCAKCALEILKAEAMRLPGLA
Ga0209688_101156423300026305SoilMTVEQSELEREMVPIVDRCFRGCGTRAVLSDGISKFCAECALTILKAEARRLPGLAA
Ga0209469_101540443300026307SoilMMIERTEQEREMVPIVDRCFKGCGTRAVLSDGFSNFCAKCALAVLKAEATRPPALAA
Ga0209153_105271123300026312SoilMTVEQSELEREMVPIVDRCFRGCGTRAVLSDGTSNFCAECALTILKAEARRLPGLAA
Ga0209686_110027723300026315SoilMTIEQTELDREMVPIAERCFRGCGTRAVIVDDFSAFCANCALAMLKAEALRLARLAA
Ga0209154_118069313300026317SoilMTIEPSELEPEMVPIVNRCYRGCGTRAVLVDGFSAFCAKCALVMLEAEVVRRSKLAA
Ga0209152_1041932723300026325SoilIEQSELEPEMVRIVNRCYRGCGTRAVLVDGFSAFCAKCALVMLEAEVVRRSKLAA
Ga0209058_121110423300026536SoilMTIEQGELEREMVPIAERCFRGCGTRAVLVEGFSAYCAKCSLALLQAKVIQAPRLAA
Ga0209056_1005434553300026538SoilMTVEQSELEREMVPIVDRCFRGCGTRAVLSHGISKFCAECALTILKAEARRLPGLPA
Ga0209526_1093422723300028047Forest SoilELKREMVPIVDRCFRGCGTRAVLSDGFSNFCAKCALTVLKAEAKRLPALAA
Ga0307299_1035562713300028793SoilMNTEQSELEREMVPIVDRCFRGCGTRAVFSDGCSNFCAKCALAILTAEA
Ga0307312_1023853613300028828SoilMMIEQTELEREMVPIVDRCFKGCGTRAVFSDGFSNFCARCALAILEAEARRQPRLAA
Ga0307312_1029902923300028828SoilMTIEQIELEREMVPIVDRCYRGCGTRAVVSDGFSSFCAKCALAIFKTEAIRLPARAA
Ga0307471_10196397013300032180Hardwood Forest SoilMNIEQGELKREMVPIVDRCFRGCGTRAVLSDGFSNFCAKCALTVLKAEAKRLPALAA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.