Metagenome / Metatranscriptome Family F091742

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091742
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	120 residues
Representative Sequence	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAAEDLTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR
Number of Associated Samples	90
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	49.06 %
% of genes near scaffold ends (potentially truncated)	44.86 %
% of genes from short scaffolds (< 2000 bps)	86.92 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.065 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (16.822 % of family members)
Environment Ontology (ENVO)	Unclassified (34.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.682 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.53% β-sheet: 14.09% Coil/Unstructured: 56.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00076	RRM_1	45.79
PF04028	DUF374	1.87
PF00849	PseudoU_synth_2	1.87
PF03602	Cons_hypoth95	1.87
PF02581	TMP-TENI	0.93
PF00440	TetR_N	0.93
PF07584	BatA	0.93
PF00211	Guanylate_cyc	0.93
PF13193	AMP-binding_C	0.93
PF03006	HlyIII	0.93
PF13360	PQQ_2	0.93
PF14535	AMP-binding_C_2	0.93
PF00171	Aldedh	0.93
PF02371	Transposase_20	0.93
PF02566	OsmC	0.93
PF13414	TPR_11	0.93
PF13893	RRM_5	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	1.87
COG0742	16S rRNA G966 N2-methylase RsmD	Translation, ribosomal structure and biogenesis [J]	1.87
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	1.87
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	1.87
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	1.87
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	1.87
COG2242	Precorrin-6B methylase 2	Coenzyme transport and metabolism [H]	1.87
COG2121	Uncharacterized conserved protein, lysophospholipid acyltransferase (LPLAT) superfamily	Function unknown [S]	1.87
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.93
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.93
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.93
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.93
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.93
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.93
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.93
COG0352	Thiamine monophosphate synthase	Coenzyme transport and metabolism [H]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	82.24 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.87 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	80.37 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.87 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	80.37 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	79.44 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	79.44 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Unclassified	root	N/A	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10192624	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	989	Open in IMG/M
3300004268\|Ga0066398_10046256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	863	Open in IMG/M
3300005171\|Ga0066677_10008227	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4399	Open in IMG/M
3300005180\|Ga0066685_10078032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2181	Open in IMG/M
3300005332\|Ga0066388_100188509	All Organisms → cellular organisms → Bacteria	2676	Open in IMG/M
3300005332\|Ga0066388_100926124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1446	Open in IMG/M
3300005332\|Ga0066388_107587954	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300005439\|Ga0070711_100393555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1123	Open in IMG/M
3300005444\|Ga0070694_100647036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	855	Open in IMG/M
3300005445\|Ga0070708_100109626	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2536	Open in IMG/M
3300005450\|Ga0066682_10226823	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1200	Open in IMG/M
3300005467\|Ga0070706_100842311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	848	Open in IMG/M
3300005471\|Ga0070698_101671094	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300005518\|Ga0070699_100008404	All Organisms → cellular organisms → Bacteria	8941	Open in IMG/M
3300005518\|Ga0070699_100160465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1990	Open in IMG/M
3300005526\|Ga0073909_10054553	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1462	Open in IMG/M
3300005529\|Ga0070741_10005328	All Organisms → cellular organisms → Bacteria	28683	Open in IMG/M
3300005529\|Ga0070741_10014758	All Organisms → cellular organisms → Bacteria	13435	Open in IMG/M
3300005536\|Ga0070697_100762370	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	855	Open in IMG/M
3300005536\|Ga0070697_102131027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300005538\|Ga0070731_10213139	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300005546\|Ga0070696_100842547	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	757	Open in IMG/M
3300005546\|Ga0070696_101344593	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	608	Open in IMG/M
3300005549\|Ga0070704_101123562	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	714	Open in IMG/M
3300005549\|Ga0070704_101931444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300005552\|Ga0066701_10396046	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	854	Open in IMG/M
3300005561\|Ga0066699_11290257	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300005576\|Ga0066708_10669821	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300005614\|Ga0068856_100620593	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1102	Open in IMG/M
3300005614\|Ga0068856_102680187	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300005713\|Ga0066905_100161418	All Organisms → cellular organisms → Bacteria → Proteobacteria	1629	Open in IMG/M
3300005764\|Ga0066903_100122844	All Organisms → cellular organisms → Bacteria	3617	Open in IMG/M
3300005764\|Ga0066903_102765111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	952	Open in IMG/M
3300005764\|Ga0066903_104688635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	728	Open in IMG/M
3300005985\|Ga0081539_10048206	All Organisms → cellular organisms → Bacteria → Proteobacteria	2425	Open in IMG/M
3300006794\|Ga0066658_10123615	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1267	Open in IMG/M
3300006797\|Ga0066659_10988247	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300006797\|Ga0066659_11250546	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300006804\|Ga0079221_11561695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300006852\|Ga0075433_10069834	All Organisms → cellular organisms → Bacteria	3086	Open in IMG/M
3300006854\|Ga0075425_100300760	All Organisms → cellular organisms → Bacteria	1846	Open in IMG/M
3300006871\|Ga0075434_100893195	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300006903\|Ga0075426_10641223	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	795	Open in IMG/M
3300006954\|Ga0079219_11086834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	676	Open in IMG/M
3300009012\|Ga0066710_101766608	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	936	Open in IMG/M
3300009147\|Ga0114129_11062675	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1016	Open in IMG/M
3300009162\|Ga0075423_10225610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1963	Open in IMG/M
3300010043\|Ga0126380_11705058	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300010046\|Ga0126384_10266007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1394	Open in IMG/M
3300010047\|Ga0126382_10124265	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300010112\|Ga0127458_1035342	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300010304\|Ga0134088_10068829	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1643	Open in IMG/M
3300010325\|Ga0134064_10479579	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300010336\|Ga0134071_10237117	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	906	Open in IMG/M
3300010337\|Ga0134062_10401166	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	671	Open in IMG/M
3300010359\|Ga0126376_10238894	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300010359\|Ga0126376_12615982	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	553	Open in IMG/M
3300010360\|Ga0126372_10094677	All Organisms → cellular organisms → Bacteria	2224	Open in IMG/M
3300010397\|Ga0134124_10698745	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1004	Open in IMG/M
3300010401\|Ga0134121_13268151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300012372\|Ga0134037_1119159	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300012382\|Ga0134038_1066055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	522	Open in IMG/M
3300012384\|Ga0134036_1062716	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	828	Open in IMG/M
3300012400\|Ga0134048_1266342	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	649	Open in IMG/M
3300012402\|Ga0134059_1242856	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	751	Open in IMG/M
3300012403\|Ga0134049_1379374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	733	Open in IMG/M
3300012406\|Ga0134053_1436645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	826	Open in IMG/M
3300012410\|Ga0134060_1193660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300012410\|Ga0134060_1382690	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300012582\|Ga0137358_11002489	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300012929\|Ga0137404_11256094	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	682	Open in IMG/M
3300012929\|Ga0137404_11474911	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300012948\|Ga0126375_11118683	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	650	Open in IMG/M
3300012971\|Ga0126369_12159419	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M
3300013297\|Ga0157378_12272298	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300014154\|Ga0134075_10066800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1498	Open in IMG/M
3300014154\|Ga0134075_10232266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	796	Open in IMG/M
3300015264\|Ga0137403_11028912	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	670	Open in IMG/M
3300015371\|Ga0132258_13483926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1078	Open in IMG/M
3300015372\|Ga0132256_100393439	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300015374\|Ga0132255_101786274	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	934	Open in IMG/M
3300017656\|Ga0134112_10415764	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300017659\|Ga0134083_10178738	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	869	Open in IMG/M
3300018058\|Ga0187766_10058503	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2279	Open in IMG/M
3300018431\|Ga0066655_10005360	All Organisms → cellular organisms → Bacteria	5207	Open in IMG/M
3300018468\|Ga0066662_11074980	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	802	Open in IMG/M
3300021560\|Ga0126371_13710213	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300025319\|Ga0209520_10706761	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	567	Open in IMG/M
3300025326\|Ga0209342_10471002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1051	Open in IMG/M
3300025910\|Ga0207684_10744932	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	831	Open in IMG/M
3300025916\|Ga0207663_10957164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	686	Open in IMG/M
3300026078\|Ga0207702_10538987	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1141	Open in IMG/M
3300026296\|Ga0209235_1136752	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1002	Open in IMG/M
3300026328\|Ga0209802_1107571	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1245	Open in IMG/M
3300026329\|Ga0209375_1183605	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	822	Open in IMG/M
3300026332\|Ga0209803_1155465	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	881	Open in IMG/M
3300026332\|Ga0209803_1195649	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	751	Open in IMG/M
3300026528\|Ga0209378_1263752	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300026536\|Ga0209058_1164036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1014	Open in IMG/M
3300027821\|Ga0209811_10056459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1351	Open in IMG/M
3300027869\|Ga0209579_10136209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1306	Open in IMG/M
3300031740\|Ga0307468_100301922	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1163	Open in IMG/M
3300031820\|Ga0307473_10200230	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300031962\|Ga0307479_10854042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	884	Open in IMG/M
3300032009\|Ga0318563_10740152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
3300032180\|Ga0307471_100576388	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.98%
Host-Associated	Host-Associated	14.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.98%
Plants	Host-Associated → Plants	14.02%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.68%
Loam	Environmental → Terrestrial → Soil → Loam	23.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	16.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010112	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012384	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_101926242	3300002908	Grasslands Soil	VRFKDVTASHQRLLRDVTNRISSGLETEFSELPGVDGPNVGLILRERRRQVVMELPAALLMQAVEDISAREAIRVRIKGRRDRMLFQAPPSPLPKHIATAPAPGSMHFGFGRGGGGPRGRR*
Ga0066398_100462561	3300004268	Tropical Forest Soil	LRLKDVTESHRRLLRDLTSRISRALETEFSELPDADGPSVGIILRERRREVTVEIPAALLTEATGDATAREAIRVRIKARRDRMLFKAPPSPLPKHIATVPGAMPFGVGRTGGGPRGRR*
Ga0066677_100082279	3300005171	Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0066685_100780325	3300005180	Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAAEDLTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0066388_1001885093	3300005332	Tropical Forest Soil	VRLKEITASHQRLLRDLTTRISSGLESEFSELPGPEGPNVGVTLRERRREVVMEIPAALLAQAAEDRSAREAIRVRIKTRRDRMLFQAPPRPLPKRIATATALDGVFGWSRGGGGPRGRR
Ga0066388_1009261241	3300005332	Tropical Forest Soil	AAAIARAVASAAAATTDRCLVRLHDVTASHQRLLRDLTSRISNGLESEFSELPDADSPNVGIILRERRCQVLMEIPAALLMQAVDDLTAREAIRVRIKGRRDRMLFKAAPSPLPKHIATAPAPGGLFGFGRGGGGPRGRR*
Ga0066388_1075879542	3300005332	Tropical Forest Soil	VHLKDVTASHRRLLQELTGRISARLETEFSELPSPDGLNVGIILRERGRHVTMEVPGALLIEAAQDPTAREAIRVRIKGRRDRMLFQAPPSPLPKHIATAPAPGGMFGFGRSGGGQRRR*
Ga0070711_1003935553	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VRIRDITESHRRLLRDLSSRISRALETEFSELPDADGPGVGIILRERRREVTVEIPAALLTEAAGDATAREAIRVRIKARRDRMLLKAPPSPLPKRIAMAPRAMPFGVGRTDGGPRGRR*
Ga0070694_1006470362	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VRVKDVTPSHQHLLRDLTGRISSGLESEFSDLPGEDGPNVGVILRERRRQVVMEIPAALLAQAADDVTAREAIRVRIKARRDRMLFQAPPSPLPKHIATAPAPGSMQFGFGRGGGG
Ga0070708_1001096264	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRLKDVTASHQRLLRDLTSRISCGLETEFSELPGADGPNVGVILREQHRQVVMEIPAALLMQAADDLAAREAIRVRIKGRRDRMLFRAPPAPLPKHIAVAPAPGMSHFGFGGRGGGRRGRR*
Ga0066682_102268233	3300005450	Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPRHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0070706_1008423111	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LLRDLTTRISSGLESEFSELPGPDGPNVGITLRERRRQVVMEVPGALLTQAADDLSARETLRVRIKTRRDRMLFQAPPRPLPKNIPSTVMPGGFGFGRDGGGPRGRR*
Ga0070698_1016710941	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LKDITPAHKRLLRDLTTRISSGLESEFSELPGPDGPNVGITLRERRRQVVMEVPGALLTQAADDLSARETLRVRIKTRRDRMLFQAPPRPLPKNIPSTVMPGGFGFGRDGGGPRGRR*
Ga0070699_1000084046	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VAAIARAVASAAAATTRRRPVRFKEVTASHQRLLRDVTGRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPGALLIQAVEDLTAREAIRVRIKGRRDRMLFQAPPTPLPKHIATAPAPGGMHFGFGRGGGGSRGRR*
Ga0070699_1001604653	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VRLKDVTASHQRLLRDLTSRISCGLETEFSELPGADGPNVGVVLREQHRQVVMEIPAALLMQAADDLAAREAIRVRIKGRRDRMLFRAPPAPLPKHIAVAPAPGMSHFGFGGRGGGRRGRR*
Ga0073909_100545532	3300005526	Surface Soil	VAAIAHAVASAAAATTERRPVRIDDVTAAHQRLLRDLTGRISNGLESEFSELRDADGPNVGIVLRERRCEVVMEIPAALLMQAVDDLAAREAVRVRIKSRRDRMLFKAPPSPLPKHVASAPAPGAFQFGFGRGGGGPRGRR*
Ga0070741_100053289	3300005529	Surface Soil	MRLKDVTASQQRLLRDLTNQISTGLEATFSEMPGAEGRSVGIGVVLRERHREVVIEIPEALLVQAVDDVSAREAVRVRIKGRRDRMLFREPPKPLPKHIAAAAAPGSMNFGFGAGRGGGRPRGRR*
Ga0070741_1001475812	3300005529	Surface Soil	VRLRDISPSQHRLLRDVTSQISNKLETEFSELPGVEGPSVGIVLHERHRHVLIEIPADLLMRAAGDLTAREAIRVHIKGRRDRMLFRAPPKPLPKHIAAAATPGSMHSGFGYRRGGGPRGRR*
Ga0070697_1007623701	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GGATSLPVRLKDITQSHQRLLRDLTNRISGGLETEFSELPGADGPNVGVILRERRRQVQMEISGALLMQAADDLTAREAIRVRIKTRRDRMLFQAPPSPLPKQIASAPTPGSMPFGFGRGGGGPRGRR*
Ga0070697_1021310271	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GTTSDRRPVRLKDVTESHRRLLRDLTSRISNALETEFSELPDADGPSVGIILRERRREVMMEIPAALLAEAAGDATAREAIRVRIKARRDRMLFKAPPSPLPKHIATVPGSLPFGFGRAGGGGPRGRR*
Ga0070731_102131391	3300005538	Surface Soil	VRLKDITAAHQRLLRDLTTRISSGLESEFSELPGPDGPNVGITLRERRRHVVMEVPGTLLAQAAEDLSARETLRVRIKTRRDRMLFQAPPRPLPKKITSTVMPGGFGFGRDGGGPRGRR*
Ga0070696_1008425472	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RISSGLESEFSDLPGEDGPNVGVILRERRRQVVMEIPGALLAQAADDVIAREAIRVRIKARRDRMLFQAPPSPLPKHIATAPAPGSMQFGFGRGGGGPRGRR*
Ga0070696_1013445931	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VAAIAHAVASAAAATTDRRPVRIDDVTAAHQRLLRDLTGRISNGLESEFSELRDADGPNVGIVLRERRCEVVMEIPAALLMQAVDDLAAREAIRVRIKSRRDRMLFKAPPSPLPKRVAAAPAPGAFQFGFGRGGGGPRGRR*
Ga0070704_1011235622	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VRVKDVTPSHQHLLRDLTGRISSGLESEFSDLPGEDGPNVGVILRERRRQVVMEIPAALLAQAADDVTAREAIRVRIKARRDRMLFQAPPSPLPKHIATAPAPGSMQFGFGRGGGGPRGRR*
Ga0070704_1019314441	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AVRLKEITSSHQRLLRDLTNRISTGLETEFSELPGADGPNVGLILRERRRHVQMEIPAALLMQAADDLTAREAIRVRIKTRRDRMLFQAPPAPLPKQVATAPAPGSMPFGFGRGGGGPRGRR*
Ga0066701_103960462	3300005552	Soil	VRFKDVTASHQRLLRDVTNRISSGLETEFSELPGVDGPNVGLILRERRRQVVMELPAALLMQAVEDISAREAIRVRIKGRRDRMLFQAPPSPLPKHIATAPAPGSMHFGFGR
Ga0066699_112902572	3300005561	Soil	VRLKEITAAHQRLLRDLTTRISNGLESEFSELPVPDGPNVGITLRERRRHVVMEVPAALLAQAADDLSAREMLRVRIKARRDRMLYQAPPRPLPKKIASTVMPGGFGFGRDGGGPRGRR*
Ga0066708_106698211	3300005576	Soil	TASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0068856_1006205933	3300005614	Corn Rhizosphere	TRISTGLESEFSELPGPDGPNVGITLRERRRHVVMEVPGALLAQAADDLSARETLRVRIKTRRDRMLFQAPPRPLPKNIQSTVMPGGFGFGRDGGGPRGRR*
Ga0068856_1026801872	3300005614	Corn Rhizosphere	TRPAPVRLKDITPAHQRLLRDLTTRISTGLESEFSELPGPDGPSVGITLRERKRHVVMEVPTALLVQAADDLSARETLRVRIKARRDRMLFQAPPRPLPKKIASATMPGGFGWGRDGGGPRGRR*
Ga0066905_1001614183	3300005713	Tropical Forest Soil	RWLRRPPQLLGDRRPLRLKDVTESHRRLLRDLTSRISRALETEFSELPDADGPSVGIILRERRREVTVEIPAALLTEATGDATAREAIRVRIKARRDRMLFKAPPSPLPKHIATVPGAMPFGVGRTGGGPRGRR*
Ga0066903_1001228443	3300005764	Tropical Forest Soil	VHLKDITASHRRLLQELTGRISARLETEFSELPSPDGLNVGIILRERGRHVTMEVPGALLIEAAQDPTAREAIRVRIKGRRDRMLFQAPPSPLPKHIATAPAPGGMFGFGRSGGGQRRR*
Ga0066903_1027651112	3300005764	Tropical Forest Soil	VVAIAAVAASAAVATTRRRRPLRLKDVTESHRRLLRDLTTRISRALEAEFSELPDADGPSVGVILRERRREVTLEIPATLLTEAAGDATAREAIRVRIKARRDRMLFKAPPSPLPKHIATVPGAMPFGFGRGGGGGPRGRR*
Ga0066903_1046886351	3300005764	Tropical Forest Soil	VRLKDITPSQQRLLRDLSARISGGLESEFSELPGPDGPNVGVMLRERRREVLMEIPAALLAQAAEDPAAKEAIRVRIKARRDRMLFQPPPSPLPKRIATAPVAGSPFGFGSGRGGSPRGR
Ga0081539_100482063	3300005985	Tabebuia Heterophylla Rhizosphere	VRLKEITPSHNRLLRDLSSRISNGLESEFSELPGADGPNVGITLRERRRHVVMEVPAALLLQATEDASAREALRVRIKARRDRMLFTPPPSPLPKRIATTPAPGGLLTGFGRGGGGPRGRR*
Ga0066658_101236152	3300006794	Soil	VRFKDVTASHQRLLRDVTNRISSALETEFSELPGVDGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0066659_109882471	3300006797	Soil	VRLKEITAAHQQLLRDLTSRISSGLESEFSELPGPDGPNVGITLRERRRHVVMEVPAVLLAQAADDLTARETLRVRIKTRRDRMLFQAPPRPLPKHIASAATPGG
Ga0066659_112505462	3300006797	Soil	VRFKDVTASHQRLLRDVTNRISSALETEFSELPGVDGPNVGLILRERRRQVVMEIPGALLMQAVEDISAREAIRVRIKGRRDRMLFQAPPSPLPKHIAMAPAPGGMHFGFGRSGGGSRGRR*
Ga0079221_115616952	3300006804	Agricultural Soil	VRLKDITAAHQRLLRDLTTRISTGLESEFSELPGPDGPNVGVTLRERRRHVVMEVPGALLAQAADDLSARETLRVRIKTRRDRMLFQAPPRPLPKNIQS
Ga0075433_100698342	3300006852	Populus Rhizosphere	VRLHEVTASHQRLLRDLTSRISNGLESEFSELKDADGPNVGVILRERRCEVVMEIPAALLMQAVDDLTAREAIRIRIKGRRDRMLFKAPPGPLPKHIARAPAPGGFQFGFGRGGPRGRR*
Ga0075425_1003007603	3300006854	Populus Rhizosphere	VRIRDITESHRRLLRDLSSRISRALETEFSELPDADGPGVGIILRERRREVTVEIPAALLTEAAGDATAREAIRVRIKARRDRMLFKAPPSPLPKRSAMAPRAMPFGVGRTDGGPRGRR*
Ga0075434_1008931952	3300006871	Populus Rhizosphere	VAAIAHAVASAAAATTDRRPVRIDDVTAAHQRLLRDLTGRISNGLESEFSELRDADGPNVGIVLRERRCEVVMEIPAALLMQAVDDLAAREAIRVRIKSRRDRMLFKAPPSPLPKRVAAAPAPGAFQFGFGRGGGGHRGRR*
Ga0075426_104514682	3300006903	Populus Rhizosphere	NGLESEFSELKDADGPNVGVILRERRCEVVMEIPAALLMQAVDDLTAREALRVRIKGRRDRMLFKVPPGPLPKHIARAPAPGGFQFGFGRGGPRGRR*
Ga0075426_106412231	3300006903	Populus Rhizosphere	RWLRRPPQLLGAVVRYKEITPSHQRLLRDVTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPAVLLAQAVEDLTAREAMRVRIKGRRDRMLYQAPPSPLPKHIASAPAPGGMHFGFGRSGGGPRGRR*
Ga0079219_110868342	3300006954	Agricultural Soil	VAAIAHAVSSAAAATTDRRPVRIDDVTAAHQRLLRDLTGRISNGLESEFSELRDADGPNVGIVLRERRCEVVMEIPAALLMQAVDDLAAREAIRVRIKSRRDRMLFKAPPSPLPK
Ga0066710_1017666081	3300009012	Grasslands Soil	MGKNFKDVTASHQRLLRDLTNRISSGLETEFSELPDPDGPNVGLILRERRRQVVMEIPVALLMQAAEDLTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR
Ga0114129_110626752	3300009147	Populus Rhizosphere	VRIDDVTAAHQRLLRDLTGRISNGLESEFSELRDADGPNVGIVLRERRCEVVMEIPAALLMQAVDDLAAREAIGVRIKSRRHRMLFKAPPSPLPKRVAAAP
Ga0075423_102256102	3300009162	Populus Rhizosphere	VRIDDVTAAHQRLLRDLTGRISNGLESEFSELRDADGPNVGIVLRERRCEVVMEIPAALLMQAVDDLAAREAIRVRIKSRRDRMLFKAPPSPLPKRVAAAPAPGAFQFGFGRGGGGHRGRR*
Ga0126380_117050581	3300010043	Tropical Forest Soil	GAASAAGAAIRAGRAVRLKEITASHQRLLRDLTTRISSGLESEFSELPGPEGPNVGVTLRERRRAVVMEIPAALLAQAAEDLSAREAIRVRIKTRRDRMLFQAPPRPLPKRIAPATALDGVFGWGRGGGGPRGRR*
Ga0126384_102660071	3300010046	Tropical Forest Soil	VHLKDVTASHRRLLQDLTNRISTGLETGFSEPSSPDGPNVGIVLRERHRQVTIEVPGALLTQAIDDPTAREAIRVRIKGRRDRMLFQAPPTPLPKRIATAPAPGGMFGFGRG
Ga0126382_101242652	3300010047	Tropical Forest Soil	TESHRRLLRDLSSRISRSLEAEFSELPDADGPSVGVILREKRREVTVEIPAALLTEATGDATAREAIRVRIKARRDRMLFKAPPSPLPKHIATVPGAMPFGVGRTGGGPRGRR*
Ga0127458_10353421	3300010112	Grasslands Soil	IARAGASAAGATTRRRAVRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPKHVATAPAPGSFHFGFGRGGGGPRGRR*
Ga0134088_100688295	3300010304	Grasslands Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGS
Ga0134064_104795791	3300010325	Grasslands Soil	ARAGASAAGATTRRRAVRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPRHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0134071_102371172	3300010336	Grasslands Soil	LRDLTTRISSGLETEFSELRGGDGPNVGILLRERRRQVVVEIPAALLMQAAEDLTAREAIRVRIKSRRDRMLFRAPPGPLPKHIATAPTPGFMTFGFGRGRADPRGRR*
Ga0134062_104011662	3300010337	Grasslands Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPKHMATAPAPGSMHFGFGRSGGGPRGRR*
Ga0126376_102388942	3300010359	Tropical Forest Soil	VRLKEITASHQRLLRDLTTRISSGLESEFSELPGPEGPNVGVTLRERRREVVMEIPAALLAQAAEDLSAREAIRVRIKTRRDRMLFQAPPRPLPKRIAPATALDGVFGWGRGGGGPRGRR
Ga0126376_126159821	3300010359	Tropical Forest Soil	LRLKDVTESHRRLLRDLTSRISRALETEFSELPDADGPSVGIILRERRREVTVEIPAALLTEAAGDATAREAIRVRIKARRDRMLFKAPPSPLPKHIATAPGAIPFGFGRTGGGPRGRR*
Ga0126372_100946772	3300010360	Tropical Forest Soil	VRLKEITASHQRLLRDLTTRISSGLESEFSELPGPDGPNVGVTLRERRRQVVMEIPAVLLAQAAGDPTAREAIRVRIKTRRDRMLFQAPPSPLPKRIATAPTPGSAFGFGFGRSGGGPRGRR*
Ga0134124_106987451	3300010397	Terrestrial Soil	VRIDDVTAAHQRLLRDLTGRISNGLESEFSELRDADGPNVGIVLRERRCEVVMEIPAALLMQAVDDLAAREAIRVRIKSRRDRMLFKAPPSPLPKRVAAAPAPGAFQFGFGRGGGGPRGRR*
Ga0134121_132681511	3300010401	Terrestrial Soil	HQRLLRDLTNGISNSLETEFVNPSTEDGPNVGIMLREKRRQTMIEIPATLLIEAGEDLVAREAIRVHIKGRRDRMLFKAPPSPLPKHITSAPPPGGMHFGPGRGGGGFRGRR*
Ga0134037_11191591	3300012372	Grasslands Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRINGRRDRMLYQVPPSPLPKHIATAP
Ga0134038_10660551	3300012382	Grasslands Soil	PIARAGASAAGATTRRRAVRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0134036_10627161	3300012384	Grasslands Soil	VRFKDVTASHPRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0134048_12663422	3300012400	Grasslands Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAAEDLTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRS
Ga0134059_12428561	3300012402	Grasslands Soil	MRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0134049_13793742	3300012403	Grasslands Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDLSAREAIRVRIKGRRDRMLFQAPPSPLPKHIAMAPAPGGMHFGFGRSGGGSRGRR*
Ga0134053_14366452	3300012406	Grasslands Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAADDLTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0134060_11936601	3300012410	Grasslands Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAADDLTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGG
Ga0134060_13826901	3300012410	Grasslands Soil	VRLKDITASHQRLLRDLTTRISSGLETEFSELRGGDGPNVGILLRERRRQVVMEIPAALLMQAAEDLTAREAIRVRIKSRRDRMLFRAPPGPLPKHIATAPTPGFMTFGF
Ga0137358_110024891	3300012582	Vadose Zone Soil	VRLKDITAAHQRLLRALSNRISNGLEAEFTELPDADGPNVGVVLREHRRRVVMEIPALLLDQAGADLTAREAIRIRIKIRRDRMLFQAPPSPLPKRIATAPSPGSMHSGFGWGGGPRGRR
Ga0137404_112560942	3300012929	Vadose Zone Soil	AAAATTRRRRVRFKEVTASHQRLLRDVTSRISSGLETEFSELPGADGPNVGVILRERRRQVVMEIPAALLMQAVEDLTAREAVRVRIKGRRDRMLFQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0137404_114749112	3300012929	Vadose Zone Soil	VRLKDVTESHRRLLRDLTSRISNALESEFSELPDADGPNVGIILRERRREVMVEIPAALLAEAGGDLAAREAIRVRIKTRRDRMLFKAPPSPLPKNIATLPSS
Ga0126375_111186832	3300012948	Tropical Forest Soil	VHLKDVTASHRRLLQDLTNRISTGLETGFSEPSSPDGPNVGIVLRERHRQVTIEVPGALLTQAIDDPTAREAIRVRIKGRRDRMLFQAPPTPLPKRIATAPAPGGMFGFGRGGGGQRR*
Ga0126369_121594191	3300012971	Tropical Forest Soil	VRLKDITPSQQRLLRDLSARISGGLESEFSELPGPDGPNVGVMLRERRREVLMEIPAALLAQAAEDPAAKEAIRVRIKARRDRMLFQPPPSPLPKHIATAP
Ga0157378_122722981	3300013297	Miscanthus Rhizosphere	MRLRDITPTHHRLLRDLTNGISSSLETEFVNPSAEDGPSVGIMLREKRRQTMIEIPATLLIEAAEDLVAREAIRVHIKGRRDRMLFKAPPSPLPKHITSAPPPGGMHFGPGRGGGGFRGRR*
Ga0134075_100668003	3300014154	Grasslands Soil	AAPIARAGASAAGATTRRRAVRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0134075_102322662	3300014154	Grasslands Soil	MRFKDVTASHQRLLRDVTNRISSGLETEFSELPGEDGPNVGLILRERRRQVVMEIPVALLMQAVEDLTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0137403_110289122	3300015264	Vadose Zone Soil	VRFKEVTASHQRLLRDVTSRISSGLETEFSELPGADGPNVGVILRERRRQVVMEIPAALLMQAVEDLTAREAVRVRIKGRRDRMLFQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR*
Ga0132258_134839261	3300015371	Arabidopsis Rhizosphere	RRRDMTASHHRLLRDLTGRISGGLETEFSDLPGDDGPNVGIILRERRRQVVIEIPATLLIEATGDATAREAIRVHIKLRRDRMLFQAPPSPLPKRISAAPAPGSMHFGFGRGGARGRR*
Ga0132256_1003934393	3300015372	Arabidopsis Rhizosphere	VAAIAHAVASAAAATTDRRLVRLHEVTASHQRLLRDLTSRISNGLESEFSELKDADGPNVGVILRERRCEVVMEIPAALLMQAVDDLTAREALRVRIKGRRDRMLFKVPPGPLPKHIARAPAPGGFQFGFGRGGPRGRR*
Ga0132255_1017862742	3300015374	Arabidopsis Rhizosphere	VRLHEVTASHQRLLRDLTSRISNGLESEFSELKDADGPNVGVILRERRCEVVMEIPAALLMQAVDDLTAREALRVRIKGRRDRMLFKVPPGPLPKHIARA
Ga0134112_104157641	3300017656	Grasslands Soil	PRGDMGKNFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPRHIATAPAPGSMHFGFGRSGGGPRGRR
Ga0134083_101787381	3300017659	Grasslands Soil	MRFKDVTASHQRLLRDVTNRISSGLETEFSELPGEDGPNVGLILRERRRQVVMEIPVALLMQAVEDLTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGR
Ga0187766_100585033	3300018058	Tropical Peatland	VRLKDITASHQRLLRDLTNRISSGLETEFSELADADGPNVGIVLRERRRQVVMEIPAALLMQAAGDATVREAIRVRIKGRRDRMLFQAPPSPLPKHIATTPAPGPMHLGFGRGGGGPRGR
Ga0066655_100053606	3300018431	Grasslands Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGR
Ga0066662_110749803	3300018468	Grasslands Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAAEDLTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGR
Ga0126371_137102132	3300021560	Tropical Forest Soil	VHLKDITASHRRLLQELTGRISARLETEFSELPSPDGLNVGIILRERGRHVTMEVPGALLIEAAQDPTAREAIRVRIKGRRDRMLFQAPPSPLPKHIATAPAPGGMFGFGRSGGGQRRR
Ga0209520_107067611	3300025319	Soil	VRLKEIARSHERLLRDLAGRISNGLETEFSELPDADGPNVGVTLRERGRRVVMEIPGALLMQAGDDATAREAIRVRIKARRDRMLFRPPPSPLPKHIAPAATPGAMHFGFGRGPMNRRGR
Ga0209342_104710021	3300025326	Soil	PVRLKEIARSHERLLRDLAGRISNGLETEFSELPDADGPNVGVTLRERGRRVVMEIPGALLMQAGDDATAREAIRVRIKARRDRMLFRPPPSPLPKHIAPAATPGSMHFGFGRGPMNRRGRR
Ga0207684_107449321	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TRISSGLESEFSELPGPDGPNVGITLRERRRQVVMEVPGALLTQAADDLSARETLRVRIKTRRDRMLFQAPPRPLPKNIPSTVMPGGFGFGRDGGGPRGRR
Ga0207663_109571641	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VAAIAHAVASAAAATTDRRPVRIDDVTAAHQRLLRDLTGRISNGLESEFSELRDADGPNVGIVLRERRCEVVMEIPAALLMQAVDDLAAREAIRVRIKSRRDRMLFKAPPSPLPKRVAA
Ga0207702_105389871	3300026078	Corn Rhizosphere	AHQRLLRDLTTRISTGLESEFSELPGPDGPNVGITLRERRRHVVMEVPGALLAQAADDLSARETLRVRIKTRRDRMLFQAPPRPLPKNIQSTVMPGGFGFGRDGGGPRGRR
Ga0209235_11367521	3300026296	Grasslands Soil	VRFKEVTASHQRLLRDVTNRISSALETEFSELPGVDGPNVGLILRERRRQVVMELPAALLMQAVEDLTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGR
Ga0209802_11075712	3300026328	Soil	VRFKDVTASHQRLLRDVTNRISSGLETEFSELPGVDGPNVGLILRERRRQVVMELPAALLMQAVEDISAREAIRVRIKGRRDRMLFQAPPSPLPKHIATAPAPGSMHFGFGRGGGGPRGR
Ga0209375_11836051	3300026329	Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPRHIATAPAPGSMHFGFGRSGGGPRGR
Ga0209803_11554652	3300026332	Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAAEDLTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGR
Ga0209803_11956492	3300026332	Soil	VRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAVEDVTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPGRLIVRRALDGVRACWAGS
Ga0209378_12637521	3300026528	Soil	SVRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAAEDLTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR
Ga0209058_11640361	3300026536	Soil	SALRAAPIARAVASAAAGTTRRRSVRFKDVTASHQRLLRDLTNRISSGLETEFSELPGADGPNVGLILRERRRQVVMEIPVALLMQAAEDLTAREAIRVRIKGRRDRMLYQAPPSPLPKHIATAPAPGSMHFGFGRSGGGPRGRR
Ga0209811_100564591	3300027821	Surface Soil	VAAIAHAVASAAAATTERRPVRIDDVTAAHQRLLRDLTGRISNGLESEFSELRDADGPNVGIVLRERRCEVVMEIPAALLMQAVDDLAAREAVRVRIKSRRDRMLFKAPPSPLPKHVASAPAPGAFQFGFGRGGGGPRGRR
Ga0209579_101362091	3300027869	Surface Soil	VRLKDITAAHQRLLRDLTTRISSGLESEFSELPGPDGPNVGITLRERRRHVVMEVPGTLLAQAAEDLSARETLRVRIKTRRDRMLFQAPPRPLPKKITSTVMPGGFGFGRDGGGPRGRR
Ga0307468_1003019221	3300031740	Hardwood Forest Soil	VRVKDVTPSHQHLLRDLTGRISSGLEYEFSDLPGEDGPNVGVILRERRRQVVMEIPAALLAQAADDVIAREAIRVRIKSRRDRMLFQAPPSPLPKHIATAPAPGSMQFGFGRGGGGPRGR
Ga0307473_102002302	3300031820	Hardwood Forest Soil	VRLKDITPSHHRLLRDLTNRISSGLETEFSELPGADGPNVGIVLRERRRQVVIEIPGALLLQAAGDVIAREAIRVHIKGRRDRMLFQAPPSALPKHIATAPAPGSMPYGFGRGGGGPRGR
Ga0307479_108540421	3300031962	Hardwood Forest Soil	VRLKDVTASQHRLLRDLTHGISNGLETEFAELPSGDGPNVGVILRERRRQVVIEIPAALLMQADGDLTAREAMRVRIKGRRDRMLFQAPPGPLPKHIATAPAPGSMLFGFGRGGGGRRGR
Ga0318563_107401521	3300032009	Soil	VLLKEITGGQHRMLRELSSRISNRLEAEFSELAGPNVGITLRERGKTVVMEVPGALLAQAGTDPTAQEAMRVRIKGRRDRMLFRPPPAPLPKRIEPAGTPGGGYFGSRGGGRKSI
Ga0307471_1005763882	3300032180	Hardwood Forest Soil	VRLKDITPSHHRLLRDLTNRISSGLETEFSELPGADGPNVGIVLRERRRQVVIEIPGALLMQAAGDVIAREAIRVHIKGRRDRMLFQAPPSALPKHIATAPAPGSMPYGFGRGGGGPRGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091742

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences