Metagenome / Metatranscriptome Family F091695

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F091695
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	68 residues
Representative Sequence	IQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Number of Associated Samples	73
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	0.94 %
% of genes near scaffold ends (potentially truncated)	96.26 %
% of genes from short scaffolds (< 2000 bps)	90.65 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Archaea (95.327 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (34.579 % of family members)
Environment Ontology (ENVO)	Unclassified (60.748 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.682 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.87% β-sheet: 26.87% Coil/Unstructured: 46.27%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00701	DHDPS	3.74
PF04199	Cyclase	3.74
PF00171	Aldedh	1.87
PF01938	TRAM	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	7.48
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	3.74
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.87
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.87
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.26 %
Unclassified	root	N/A	3.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.26 %
Unclassified	root	N/A	3.74 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	95.33 %
Unclassified	root	N/A	3.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	34.58 %
Unclassified	root	N/A	3.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	31.78 %
Unclassified	root	N/A	3.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	31.78 %
Unclassified	root	N/A	3.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	31.78 %
Unclassified	root	N/A	3.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10172823	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	579	Open in IMG/M
3300002562\|JGI25382J37095_10062449	All Organisms → cellular organisms → Archaea	1407	Open in IMG/M
3300002912\|JGI25386J43895_10060527	All Organisms → cellular organisms → Archaea	1059	Open in IMG/M
3300005172\|Ga0066683_10789691	All Organisms → cellular organisms → Archaea → TACK group	553	Open in IMG/M
3300005176\|Ga0066679_10207682	All Organisms → cellular organisms → Archaea	1250	Open in IMG/M
3300005176\|Ga0066679_10208599	All Organisms → cellular organisms → Archaea	1247	Open in IMG/M
3300005176\|Ga0066679_11022563	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	513	Open in IMG/M
3300005181\|Ga0066678_11085195	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	515	Open in IMG/M
3300005186\|Ga0066676_10450170	All Organisms → cellular organisms → Archaea	872	Open in IMG/M
3300005187\|Ga0066675_10640627	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	798	Open in IMG/M
3300005450\|Ga0066682_10216514	All Organisms → cellular organisms → Archaea	1229	Open in IMG/M
3300005558\|Ga0066698_10231077	All Organisms → cellular organisms → Archaea	1272	Open in IMG/M
3300005558\|Ga0066698_10326001	All Organisms → cellular organisms → Archaea	1062	Open in IMG/M
3300005586\|Ga0066691_10623610	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	640	Open in IMG/M
3300005586\|Ga0066691_10637221	All Organisms → cellular organisms → Archaea	633	Open in IMG/M
3300005587\|Ga0066654_10058087	All Organisms → cellular organisms → Archaea	1735	Open in IMG/M
3300006034\|Ga0066656_10634573	All Organisms → cellular organisms → Archaea	689	Open in IMG/M
3300006796\|Ga0066665_10751334	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	772	Open in IMG/M
3300006796\|Ga0066665_11036254	All Organisms → cellular organisms → Archaea	627	Open in IMG/M
3300006796\|Ga0066665_11258752	All Organisms → cellular organisms → Archaea	566	Open in IMG/M
3300006914\|Ga0075436_100941111	All Organisms → cellular organisms → Archaea	647	Open in IMG/M
3300007258\|Ga0099793_10130432	All Organisms → cellular organisms → Archaea	1181	Open in IMG/M
3300009012\|Ga0066710_104146915	All Organisms → cellular organisms → Archaea	542	Open in IMG/M
3300009038\|Ga0099829_11552162	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	546	Open in IMG/M
3300009088\|Ga0099830_10446284	All Organisms → cellular organisms → Archaea	1050	Open in IMG/M
3300009088\|Ga0099830_10551985	All Organisms → cellular organisms → Archaea	943	Open in IMG/M
3300009089\|Ga0099828_10705651	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	906	Open in IMG/M
3300009089\|Ga0099828_11820061	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	535	Open in IMG/M
3300009090\|Ga0099827_10955627	All Organisms → cellular organisms → Archaea	743	Open in IMG/M
3300009090\|Ga0099827_11903730	All Organisms → cellular organisms → Archaea → TACK group	518	Open in IMG/M
3300009137\|Ga0066709_102945047	All Organisms → cellular organisms → Archaea	627	Open in IMG/M
3300009137\|Ga0066709_103899974	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	542	Open in IMG/M
3300009806\|Ga0105081_1055179	All Organisms → cellular organisms → Archaea	589	Open in IMG/M
3300010106\|Ga0127472_1026054	All Organisms → cellular organisms → Archaea	624	Open in IMG/M
3300010107\|Ga0127494_1046475	All Organisms → cellular organisms → Archaea	641	Open in IMG/M
3300010126\|Ga0127482_1060180	All Organisms → cellular organisms → Archaea	657	Open in IMG/M
3300010140\|Ga0127456_1012422	All Organisms → cellular organisms → Archaea	640	Open in IMG/M
3300010304\|Ga0134088_10497545	All Organisms → cellular organisms → Archaea	600	Open in IMG/M
3300010321\|Ga0134067_10318723	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	604	Open in IMG/M
3300010337\|Ga0134062_10010608	All Organisms → cellular organisms → Archaea	3387	Open in IMG/M
3300010905\|Ga0138112_1013220	All Organisms → cellular organisms → Archaea	645	Open in IMG/M
3300011269\|Ga0137392_11156143	All Organisms → cellular organisms → Archaea	632	Open in IMG/M
3300011271\|Ga0137393_10775323	All Organisms → cellular organisms → Archaea	820	Open in IMG/M
3300012189\|Ga0137388_10366287	Not Available	1331	Open in IMG/M
3300012189\|Ga0137388_11420508	All Organisms → cellular organisms → Archaea	632	Open in IMG/M
3300012189\|Ga0137388_11502783	All Organisms → cellular organisms → Archaea	611	Open in IMG/M
3300012198\|Ga0137364_11307627	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	540	Open in IMG/M
3300012199\|Ga0137383_10104902	All Organisms → cellular organisms → Archaea	2054	Open in IMG/M
3300012203\|Ga0137399_10042860	All Organisms → cellular organisms → Archaea	3229	Open in IMG/M
3300012203\|Ga0137399_10549874	All Organisms → cellular organisms → Archaea	970	Open in IMG/M
3300012203\|Ga0137399_10574110	All Organisms → cellular organisms → Archaea	948	Open in IMG/M
3300012203\|Ga0137399_11342957	All Organisms → cellular organisms → Archaea	600	Open in IMG/M
3300012206\|Ga0137380_11166763	All Organisms → cellular organisms → Archaea	655	Open in IMG/M
3300012207\|Ga0137381_10353721	All Organisms → cellular organisms → Archaea	1281	Open in IMG/M
3300012207\|Ga0137381_10743019	All Organisms → cellular organisms → Archaea	852	Open in IMG/M
3300012207\|Ga0137381_11535994	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	557	Open in IMG/M
3300012207\|Ga0137381_11653766	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	531	Open in IMG/M
3300012349\|Ga0137387_10334065	All Organisms → cellular organisms → Archaea	1097	Open in IMG/M
3300012349\|Ga0137387_10789716	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	687	Open in IMG/M
3300012349\|Ga0137387_10827656	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	670	Open in IMG/M
3300012349\|Ga0137387_11138149	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	554	Open in IMG/M
3300012349\|Ga0137387_11190337	All Organisms → cellular organisms → Archaea	539	Open in IMG/M
3300012351\|Ga0137386_10578277	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	808	Open in IMG/M
3300012354\|Ga0137366_11177211	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	523	Open in IMG/M
3300012356\|Ga0137371_10063375	All Organisms → cellular organisms → Archaea	2862	Open in IMG/M
3300012356\|Ga0137371_10568329	All Organisms → cellular organisms → Archaea	872	Open in IMG/M
3300012356\|Ga0137371_10904900	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	671	Open in IMG/M
3300012356\|Ga0137371_11297308	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	539	Open in IMG/M
3300012357\|Ga0137384_10431290	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1086	Open in IMG/M
3300012393\|Ga0134052_1198055	All Organisms → cellular organisms → Archaea	638	Open in IMG/M
3300012397\|Ga0134056_1182825	All Organisms → cellular organisms → Archaea	627	Open in IMG/M
3300012399\|Ga0134061_1143495	All Organisms → cellular organisms → Archaea	632	Open in IMG/M
3300012972\|Ga0134077_10454998	All Organisms → cellular organisms → Archaea	561	Open in IMG/M
3300014154\|Ga0134075_10289844	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	712	Open in IMG/M
3300014154\|Ga0134075_10336118	All Organisms → cellular organisms → Archaea	661	Open in IMG/M
3300015358\|Ga0134089_10021227	All Organisms → cellular organisms → Archaea	2221	Open in IMG/M
3300017654\|Ga0134069_1020210	All Organisms → cellular organisms → Archaea	1993	Open in IMG/M
3300017656\|Ga0134112_10326787	All Organisms → cellular organisms → Archaea	621	Open in IMG/M
3300017656\|Ga0134112_10523778	All Organisms → cellular organisms → Archaea → TACK group	505	Open in IMG/M
3300017657\|Ga0134074_1059666	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1293	Open in IMG/M
3300017657\|Ga0134074_1285653	All Organisms → cellular organisms → Archaea	599	Open in IMG/M
3300017659\|Ga0134083_10426728	All Organisms → cellular organisms → Archaea	582	Open in IMG/M
3300018431\|Ga0066655_10899516	All Organisms → cellular organisms → Archaea	605	Open in IMG/M
3300018433\|Ga0066667_10935148	All Organisms → cellular organisms → Archaea	747	Open in IMG/M
3300018433\|Ga0066667_11370695	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	620	Open in IMG/M
3300018433\|Ga0066667_12146373	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	518	Open in IMG/M
3300021088\|Ga0210404_10167676	Not Available	1161	Open in IMG/M
3300024330\|Ga0137417_1054644	All Organisms → cellular organisms → Archaea	558	Open in IMG/M
3300026298\|Ga0209236_1164753	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	911	Open in IMG/M
3300026309\|Ga0209055_1207865	All Organisms → cellular organisms → Archaea	598	Open in IMG/M
3300026313\|Ga0209761_1057955	All Organisms → cellular organisms → Archaea	2125	Open in IMG/M
3300026314\|Ga0209268_1025015	All Organisms → cellular organisms → Archaea	2121	Open in IMG/M
3300026331\|Ga0209267_1184230	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	820	Open in IMG/M
3300026331\|Ga0209267_1184722	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	818	Open in IMG/M
3300026332\|Ga0209803_1017399	All Organisms → cellular organisms → Bacteria	3620	Open in IMG/M
3300026332\|Ga0209803_1177350	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	805	Open in IMG/M
3300026342\|Ga0209057_1019556	All Organisms → cellular organisms → Archaea	3857	Open in IMG/M
3300026342\|Ga0209057_1159845	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	684	Open in IMG/M
3300026529\|Ga0209806_1096041	All Organisms → cellular organisms → Archaea	1276	Open in IMG/M
3300026529\|Ga0209806_1278822	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	562	Open in IMG/M
3300026530\|Ga0209807_1173486	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	797	Open in IMG/M
3300026532\|Ga0209160_1306379	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	540	Open in IMG/M
3300026537\|Ga0209157_1123201	All Organisms → cellular organisms → Archaea	1197	Open in IMG/M
3300026538\|Ga0209056_10201635	All Organisms → cellular organisms → Archaea	1456	Open in IMG/M
3300026548\|Ga0209161_10236732	All Organisms → cellular organisms → Archaea	968	Open in IMG/M
3300032180\|Ga0307471_103149643	Not Available	585	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.07%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.20%
Loam	Environmental → Terrestrial → Soil → Loam	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	41.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	34.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	29.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	19.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300010106	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010107	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010905	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_101728232	3300002558	Grasslands Soil	SVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
JGI25382J37095_100624493	3300002562	Grasslands Soil	VGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLDMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
JGI25386J43895_100605271	3300002912	Grasslands Soil	ESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI*
Ga0066683_107896912	3300005172	Soil	AEEAHRPFNVLAVDGKETVLTYLWNLESPSDPGSKIAFRMSDEEFAGVMERYFEYYWLKGRRL*
Ga0066679_102076823	3300005176	Soil	GVIQEPNEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI*
Ga0066679_102085993	3300005176	Soil	AEVGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLDMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0066679_110225632	3300005176	Soil	GIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0066678_110851951	3300005181	Soil	DQKSLTALSEDAEVGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0066676_104501702	3300005186	Soil	PRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0066675_106406271	3300005187	Soil	CSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0066682_102165143	3300005450	Soil	VIQEPNEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI*
Ga0070697_1006473752	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLADEEFAGVMDRYFEYYWLKARRI*
Ga0066698_102310773	3300005558	Soil	SLLSDEAEVGVIQEPNEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI*
Ga0066698_103260013	3300005558	Soil	SEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0066691_106236101	3300005586	Soil	TALSEDAEVGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0066691_106372212	3300005586	Soil	LSDEAEVGVIQEPNEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI*
Ga0066654_100580874	3300005587	Soil	SEESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0066656_106345732	3300006034	Soil	GIITESSEESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0066665_107513341	3300006796	Soil	EPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0066665_110362542	3300006796	Soil	VGIITESSEESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0066665_112587522	3300006796	Soil	SEESPRPVNVCSVDGRDSIVTYLWNLEMPSEAGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0075436_1009411112	3300006914	Populus Rhizosphere	IQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPAEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0099793_101304323	3300007258	Vadose Zone Soil	MNVCSVDGRDSIVTYLWNLDMPAEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0066710_1041469151	3300009012	Grasslands Soil	SISALSEEAEVGGIQEPSEESPSPMNVCSVDGRDSIVTYVWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0099829_115521621	3300009038	Vadose Zone Soil	SLSALSEDAEVAVIQEPSEESPRPMNVCSVDGRDSIVTYLWNLDMPAEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0099830_104462842	3300009088	Vadose Zone Soil	VDQKSLSALSEDAEVAVIQEPSEESPRPMNVCSVDGRDSIVTYLWNLDMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0099830_105519851	3300009088	Vadose Zone Soil	EVGVIQEPNEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLTDEEFAGVMDRYFEYYWLKARRI*
Ga0099828_107056512	3300009089	Vadose Zone Soil	DQKSLSALSEDAEVAVIQEPSEESPRPMNVCSVDGRDSIVTYLWNLDMPAEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0099828_118200612	3300009089	Vadose Zone Soil	AEVGVIQEPNEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLTDEEFAGVMDRYFEYYWLKARRI*
Ga0099827_109556271	3300009090	Vadose Zone Soil	DGRDTVLTYLWNLETPNEPGSRIAFRLTDEEFAGVMDRYFEYYWLKARRI*
Ga0099827_119037301	3300009090	Vadose Zone Soil	AIIDQPVEESHRPFNVLAVDGRETVLTYLWNLETPSEPGSKIAFRMVDEEFAGVMERYFEYYWLKARRI*
Ga0066709_1029450472	3300009137	Grasslands Soil	NVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRL*
Ga0066709_1038999742	3300009137	Grasslands Soil	IQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0105081_10551792	3300009806	Groundwater Sand	LSEEGEVALIDQPSEEGQRLFNVCAIDGRETVLTYLWNLDTPSEPGSRIAFRLSDEEFAGVMERYFEYYWLKARRI*
Ga0127472_10260542	3300010106	Grasslands Soil	NVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0127494_10464751	3300010107	Grasslands Soil	SEESPRPVNVCSVDGRDSIVIYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0127482_10601801	3300010126	Grasslands Soil	TEASEESPRPVNVCSVDGRDSIVTYLWNLEMPSEAGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0127456_10124222	3300010140	Grasslands Soil	SPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0134088_104975452	3300010304	Grasslands Soil	IITESSEESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0134067_103187231	3300010321	Grasslands Soil	LTALSEQAEVGIITESSEESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0134062_100106085	3300010337	Grasslands Soil	LSEQAEVGIITESSEESPRPVNVCSVDGRDSIVTYLWNLEMPSEAGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0138112_10132202	3300010905	Grasslands Soil	EESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0137392_111561431	3300011269	Vadose Zone Soil	EEFPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLTDEEFAGVMDRYFEYYWLKARRI*
Ga0137393_107753231	3300011271	Vadose Zone Soil	QEPNEESPKPYNVCAVDGRDTVLTYLWNLDTPNEPGSRIAFRLTDEEFAGVMDRYFEYYWLKARRI*
Ga0137388_103662871	3300012189	Vadose Zone Soil	EVGVILEPNEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLTDEEFAGVMDRYFEYYWLKARRI*
Ga0137388_114205081	3300012189	Vadose Zone Soil	EDAEVAVIQEPSEESPRPMNVCSVDGRDSIVTYLWNLDMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0137388_115027831	3300012189	Vadose Zone Soil	PYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLTDEEFAGVMDRYFEYYWLKARRI*
Ga0137364_113076271	3300012198	Vadose Zone Soil	DAEVGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0137383_101049024	3300012199	Vadose Zone Soil	IQEPGEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI*
Ga0137399_100428606	3300012203	Vadose Zone Soil	EVGVIQEPNEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI*
Ga0137399_105498741	3300012203	Vadose Zone Soil	NEESPKPDNVCAVDGRDTVLTYLWNLETPSEPGSRIAFRLTDEEFAGVMDRYFEYYWLKARRI*
Ga0137399_105741102	3300012203	Vadose Zone Soil	PMNVCSVDGRDSIVTYLWNLDMPAEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0137399_113429572	3300012203	Vadose Zone Soil	LSDEAEVGVIQEPNEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLTDEEFAGVMDRYFEYYWLKARRI*
Ga0137380_111667631	3300012206	Vadose Zone Soil	IITEPSEESPRPVNVCSVDGRDSIVTYLWNLEMPSEAGSRIAFRLPDEEYAGVMERYFEYYWLKARRI*
Ga0137381_103537211	3300012207	Vadose Zone Soil	SPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI
Ga0137381_107430191	3300012207	Vadose Zone Soil	EESHRPFNVLAVDGRETVLTYLWNLEAPSDPGSKIAFRMSDEEFAGVMERYFEYYWLKARRL*
Ga0137381_115359942	3300012207	Vadose Zone Soil	LTALSEDAEVGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0137381_116537662	3300012207	Vadose Zone Soil	YNVCAVDGRDTVLTYLWNIETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI*
Ga0137387_103340652	3300012349	Vadose Zone Soil	VLAVDGKETVLTYLWNLETPSEPGSKIAFRMVDEEFAGVMERYFEYYWLKARRI*
Ga0137387_107897162	3300012349	Vadose Zone Soil	VDQKSLTALSEQAEVGIITESSEESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0137387_108276562	3300012349	Vadose Zone Soil	LTALSEEAEVGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLDMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0137387_111381491	3300012349	Vadose Zone Soil	QEPGEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI*
Ga0137387_111903372	3300012349	Vadose Zone Soil	AEVGIITEPSEESPRPVNVCSVDGRDSIVTYLWNLEMPSDPGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0137386_105782772	3300012351	Vadose Zone Soil	LTSLSEAAEVAVIEQPAEEAHRPFNVLAVDGKETVLTYLWNLESPSDPGSKIAFRMSDEEFAGVMERYFEYYWLKGRRL*
Ga0137366_111772111	3300012354	Vadose Zone Soil	AEVGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0137371_100633751	3300012356	Vadose Zone Soil	NEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI*
Ga0137371_105683292	3300012356	Vadose Zone Soil	EVGVIQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0137371_109049001	3300012356	Vadose Zone Soil	LSEDAEVGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0137371_112973081	3300012356	Vadose Zone Soil	ALSEDAEVGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLDMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0137384_104312904	3300012357	Vadose Zone Soil	GMKALSEEAEVAVIEQPAEEAHRPFNVLAVDGKETVLTYLWHLESPPDPGSKIAFRMSDEEFAGVMERYFEYYWLKSRRL*
Ga0134052_11980552	3300012393	Grasslands Soil	ESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0134056_11828252	3300012397	Grasslands Soil	VNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0134061_11434952	3300012399	Grasslands Soil	AEVGIITESSEESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0134077_104549981	3300012972	Grasslands Soil	PRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0134075_102898441	3300014154	Grasslands Soil	MNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0134075_103361181	3300014154	Grasslands Soil	LLSDEAEVGVIQEPNEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI*
Ga0134089_100212274	3300015358	Grasslands Soil	VCSVDGRDSIVTYLWNLEMPSEAGSRIAFRLSDEEYAGVMERYFEYYWLKARRI*
Ga0134069_10202104	3300017654	Grasslands Soil	RPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0134112_103267871	3300017656	Grasslands Soil	SEESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0134112_105237782	3300017656	Grasslands Soil	EHPSEESHRPFNVLAVDGRETVLTYLWNLETPSDPGSKIAFRMSDEEFAGVMERYFEYYWLKARRI
Ga0134074_10596662	3300017657	Grasslands Soil	VDQKSLTALSEDAEVGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0134074_12856532	3300017657	Grasslands Soil	IITESSEESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0134083_104267282	3300017659	Grasslands Soil	CSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0066655_108995162	3300018431	Grasslands Soil	VGIITESSEESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0066667_109351483	3300018433	Grasslands Soil	GVIQEPNEESPKPYNVCAVDGRDTILTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI
Ga0066667_113706951	3300018433	Grasslands Soil	EPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0066667_121463731	3300018433	Grasslands Soil	VGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0210404_101676762	3300021088	Soil	ADEAEVGVIMEPNEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLADEEFAGVMDRYFEYYWLKARRI
Ga0137417_10546442	3300024330	Vadose Zone Soil	EPSEESPRPMNVCSVDGRDSIVTYLWNLDMPAEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0209236_11647532	3300026298	Grasslands Soil	ESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARR
Ga0209055_12078651	3300026309	Soil	NVCAVDGRDTILTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI
Ga0209761_10579551	3300026313	Grasslands Soil	SPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0209268_10250154	3300026314	Soil	EVGIITESSEESPRPVNVCSVDGRDSIVTYLWNLEMPSEAGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0209267_11842301	3300026331	Soil	TALSEDAEVGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLDMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0209267_11847221	3300026331	Soil	TALSEDAEVGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0209803_10173991	3300026332	Soil	PYNVCAVDGRDTVLTYLWNLETPNDPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI
Ga0209803_11773501	3300026332	Soil	QEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0209057_10195566	3300026342	Soil	SVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0209057_11598451	3300026342	Soil	EVGIITESSEESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0209806_10960412	3300026529	Soil	GIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLDMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0209806_12788222	3300026529	Soil	EPNEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI
Ga0209807_11734862	3300026530	Soil	FVDQKSLTALSEDAEVGIIQEPSEESPRPMNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0209160_13063791	3300026532	Soil	EPGEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI
Ga0209157_11232011	3300026537	Soil	CAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI
Ga0209056_102016353	3300026538	Soil	DEAEVGVIQEPNEESPKPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI
Ga0209161_102367322	3300026548	Soil	QAEVGIITEPSEESPRPVNVCSVDGRDSIVTYLWNLEMPSEGGSRIAFRLSDEEYAGVMERYFEYYWLKARRI
Ga0307471_1031496432	3300032180	Hardwood Forest Soil	KPYNVCAVDGRDTVLTYLWNLETPNEPGSRIAFRLSDEEFAGVMDRYFEYYWLKARRI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091695

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences