Metagenome / Metatranscriptome Family F091694

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091694
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	82 residues
Representative Sequence	MARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKPRTPRVSHPTWRIGHDSQSGSLSAH
Number of Associated Samples	77
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	66.36 %
% of genes near scaffold ends (potentially truncated)	42.99 %
% of genes from short scaffolds (< 2000 bps)	72.90 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (95.327 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (35.514 % of family members)
Environment Ontology (ENVO)	Unclassified (54.206 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.879 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.46% β-sheet: 20.25% Coil/Unstructured: 63.29%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01053	Cys_Met_Meta_PP	28.97
PF11838	ERAP1_C	19.63
PF06745	ATPase	9.35
PF14492	EFG_III	1.87
PF00535	Glycos_transf_2	0.93
PF12900	Pyridox_ox_2	0.93
PF00149	Metallophos	0.93
PF01979	Amidohydro_1	0.93
PF02463	SMC_N	0.93
PF00211	Guanylate_cyc	0.93
PF01243	Putative_PNPOx	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	28.97
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	28.97
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	28.97
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	28.97
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	28.97
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	28.97
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	28.97
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	28.97
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	28.97
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	28.97
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	28.97
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.07 %
Viruses	superkingdom	All Organisms → Viruses	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	95.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	32.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	32.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Thermoproteota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota	32.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Crenarchaeota archaeon 13_1_20CM_2_51_8	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	32.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1016747	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300002558\|JGI25385J37094_10048521	All Organisms → cellular organisms → Archaea	1431	Open in IMG/M
3300002561\|JGI25384J37096_10056897	All Organisms → cellular organisms → Archaea	1469	Open in IMG/M
3300002562\|JGI25382J37095_10005294	All Organisms → cellular organisms → Archaea	4564	Open in IMG/M
3300002562\|JGI25382J37095_10050347	All Organisms → cellular organisms → Archaea	1604	Open in IMG/M
3300002908\|JGI25382J43887_10101714	All Organisms → cellular organisms → Archaea	1518	Open in IMG/M
3300002908\|JGI25382J43887_10102793	All Organisms → cellular organisms → Archaea	1509	Open in IMG/M
3300002911\|JGI25390J43892_10000140	All Organisms → cellular organisms → Archaea	12199	Open in IMG/M
3300002911\|JGI25390J43892_10008237	All Organisms → cellular organisms → Archaea	2393	Open in IMG/M
3300002912\|JGI25386J43895_10127515	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	630	Open in IMG/M
3300002914\|JGI25617J43924_10340400	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	520	Open in IMG/M
3300005172\|Ga0066683_10249366	All Organisms → cellular organisms → Archaea	1100	Open in IMG/M
3300005174\|Ga0066680_10063706	All Organisms → cellular organisms → Archaea	2194	Open in IMG/M
3300005174\|Ga0066680_10433002	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	832	Open in IMG/M
3300005177\|Ga0066690_10837904	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	593	Open in IMG/M
3300005178\|Ga0066688_10290333	All Organisms → cellular organisms → Archaea	1053	Open in IMG/M
3300005180\|Ga0066685_10001026	All Organisms → cellular organisms → Archaea	11418	Open in IMG/M
3300005180\|Ga0066685_10136891	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1658	Open in IMG/M
3300005186\|Ga0066676_11136820	All Organisms → cellular organisms → Archaea	513	Open in IMG/M
3300005468\|Ga0070707_100001439	All Organisms → cellular organisms → Archaea	23297	Open in IMG/M
3300005468\|Ga0070707_100566687	All Organisms → cellular organisms → Archaea	1098	Open in IMG/M
3300005540\|Ga0066697_10076203	All Organisms → cellular organisms → Archaea	1931	Open in IMG/M
3300005557\|Ga0066704_10116874	All Organisms → cellular organisms → Archaea	1765	Open in IMG/M
3300005557\|Ga0066704_10379298	All Organisms → cellular organisms → Archaea	943	Open in IMG/M
3300005559\|Ga0066700_10078724	All Organisms → cellular organisms → Archaea	2110	Open in IMG/M
3300005559\|Ga0066700_10220330	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1317	Open in IMG/M
3300005586\|Ga0066691_10421834	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	794	Open in IMG/M
3300005598\|Ga0066706_11468659	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	513	Open in IMG/M
3300006796\|Ga0066665_10852299	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	712	Open in IMG/M
3300006796\|Ga0066665_11045125	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	624	Open in IMG/M
3300006796\|Ga0066665_11201715	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	579	Open in IMG/M
3300006797\|Ga0066659_11157802	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	646	Open in IMG/M
3300007255\|Ga0099791_10690383	All Organisms → cellular organisms → Archaea	502	Open in IMG/M
3300007258\|Ga0099793_10056696	All Organisms → cellular organisms → Archaea	1743	Open in IMG/M
3300007258\|Ga0099793_10081342	All Organisms → cellular organisms → Archaea	1478	Open in IMG/M
3300007265\|Ga0099794_10036142	All Organisms → cellular organisms → Archaea	2334	Open in IMG/M
3300007265\|Ga0099794_10416837	All Organisms → cellular organisms → Archaea	702	Open in IMG/M
3300007265\|Ga0099794_10658988	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	556	Open in IMG/M
3300009012\|Ga0066710_104750652	All Organisms → cellular organisms → Archaea	508	Open in IMG/M
3300009038\|Ga0099829_10016008	All Organisms → cellular organisms → Archaea	5017	Open in IMG/M
3300009088\|Ga0099830_10057613	All Organisms → cellular organisms → Archaea	2766	Open in IMG/M
3300009088\|Ga0099830_10416542	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1088	Open in IMG/M
3300009088\|Ga0099830_10591633	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	910	Open in IMG/M
3300009089\|Ga0099828_10000899	All Organisms → cellular organisms → Archaea	19042	Open in IMG/M
3300009089\|Ga0099828_10823727	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	831	Open in IMG/M
3300010304\|Ga0134088_10204172	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	946	Open in IMG/M
3300011270\|Ga0137391_11254768	All Organisms → cellular organisms → Archaea	588	Open in IMG/M
3300011271\|Ga0137393_10772418	All Organisms → cellular organisms → Archaea	822	Open in IMG/M
3300012096\|Ga0137389_10019481	All Organisms → cellular organisms → Archaea	4744	Open in IMG/M
3300012096\|Ga0137389_10303930	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1350	Open in IMG/M
3300012096\|Ga0137389_10338511	All Organisms → cellular organisms → Archaea	1279	Open in IMG/M
3300012202\|Ga0137363_10104928	All Organisms → cellular organisms → Archaea	2155	Open in IMG/M
3300012202\|Ga0137363_10534428	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	987	Open in IMG/M
3300012203\|Ga0137399_10232375	All Organisms → cellular organisms → Archaea	1507	Open in IMG/M
3300012205\|Ga0137362_11790342	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	501	Open in IMG/M
3300012206\|Ga0137380_11373991	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	591	Open in IMG/M
3300012355\|Ga0137369_10670786	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	715	Open in IMG/M
3300012357\|Ga0137384_10424343	All Organisms → cellular organisms → Archaea	1096	Open in IMG/M
3300012357\|Ga0137384_10658643	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	852	Open in IMG/M
3300012359\|Ga0137385_10790647	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	789	Open in IMG/M
3300012363\|Ga0137390_11902631	All Organisms → cellular organisms → Archaea	523	Open in IMG/M
3300012927\|Ga0137416_10257728	All Organisms → cellular organisms → Archaea	1428	Open in IMG/M
3300012927\|Ga0137416_11223126	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	677	Open in IMG/M
3300012975\|Ga0134110_10083727	All Organisms → cellular organisms → Archaea	1278	Open in IMG/M
3300012975\|Ga0134110_10580241	All Organisms → cellular organisms → Archaea	518	Open in IMG/M
3300014154\|Ga0134075_10175107	All Organisms → cellular organisms → Archaea	920	Open in IMG/M
3300015358\|Ga0134089_10427007	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	570	Open in IMG/M
3300017654\|Ga0134069_1233461	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	636	Open in IMG/M
3300018468\|Ga0066662_11527743	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	695	Open in IMG/M
3300021046\|Ga0215015_10716431	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	782	Open in IMG/M
3300021088\|Ga0210404_10001045	All Organisms → cellular organisms → Archaea	12349	Open in IMG/M
3300022531\|Ga0242660_1137986	All Organisms → cellular organisms → Archaea	629	Open in IMG/M
3300024330\|Ga0137417_1108351	All Organisms → cellular organisms → Archaea	1164	Open in IMG/M
3300025922\|Ga0207646_10106221	All Organisms → cellular organisms → Archaea	2518	Open in IMG/M
3300025922\|Ga0207646_10121518	All Organisms → cellular organisms → Archaea	2346	Open in IMG/M
3300026277\|Ga0209350_1001074	All Organisms → cellular organisms → Archaea	12629	Open in IMG/M
3300026297\|Ga0209237_1009963	All Organisms → cellular organisms → Archaea	5684	Open in IMG/M
3300026301\|Ga0209238_1019768	All Organisms → cellular organisms → Archaea	2575	Open in IMG/M
3300026309\|Ga0209055_1053732	All Organisms → cellular organisms → Archaea	1727	Open in IMG/M
3300026309\|Ga0209055_1290147	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	513	Open in IMG/M
3300026310\|Ga0209239_1000040	All Organisms → cellular organisms → Archaea	76905	Open in IMG/M
3300026331\|Ga0209267_1032039	All Organisms → cellular organisms → Archaea	2502	Open in IMG/M
3300026331\|Ga0209267_1106802	All Organisms → cellular organisms → Archaea	1187	Open in IMG/M
3300026332\|Ga0209803_1034112	All Organisms → cellular organisms → Archaea	2374	Open in IMG/M
3300026333\|Ga0209158_1037866	All Organisms → cellular organisms → Archaea	2043	Open in IMG/M
3300026333\|Ga0209158_1157821	All Organisms → cellular organisms → Archaea	826	Open in IMG/M
3300026371\|Ga0257179_1019332	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	779	Open in IMG/M
3300026480\|Ga0257177_1007570	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300026524\|Ga0209690_1156720	All Organisms → cellular organisms → Archaea	823	Open in IMG/M
3300026527\|Ga0209059_1222976	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	632	Open in IMG/M
3300026538\|Ga0209056_10474052	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300026542\|Ga0209805_1043334	All Organisms → cellular organisms → Archaea	2267	Open in IMG/M
3300026548\|Ga0209161_10037181	All Organisms → cellular organisms → Archaea	3299	Open in IMG/M
3300026551\|Ga0209648_10143330	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300026551\|Ga0209648_10298133	All Organisms → Viruses → Predicted Viral	1156	Open in IMG/M
3300026552\|Ga0209577_10025723	All Organisms → cellular organisms → Archaea	5164	Open in IMG/M
3300027643\|Ga0209076_1022076	All Organisms → cellular organisms → Archaea	1736	Open in IMG/M
3300027643\|Ga0209076_1028155	All Organisms → cellular organisms → Archaea	1555	Open in IMG/M
3300027643\|Ga0209076_1096169	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	841	Open in IMG/M
3300027671\|Ga0209588_1000049	All Organisms → cellular organisms → Archaea	46211	Open in IMG/M
3300027748\|Ga0209689_1122593	All Organisms → cellular organisms → Archaea	1304	Open in IMG/M
3300027846\|Ga0209180_10089732	All Organisms → cellular organisms → Archaea	1743	Open in IMG/M
3300027846\|Ga0209180_10127634	All Organisms → cellular organisms → Archaea	1460	Open in IMG/M
3300027875\|Ga0209283_10004153	All Organisms → cellular organisms → Archaea	8241	Open in IMG/M
3300028536\|Ga0137415_11420789	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	516	Open in IMG/M
3300031720\|Ga0307469_10076614	All Organisms → cellular organisms → Archaea	2245	Open in IMG/M
3300032180\|Ga0307471_104137021	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.26%
Loam	Environmental → Terrestrial → Soil → Loam	3.74%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	48.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	35.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	30.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	17.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10167471	3300002557	Grasslands Soil	MARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH*
JGI25385J37094_100485213	3300002558	Grasslands Soil	KMPRLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNHEPHKARTPRVSHPTWRIGHDSQSGSLSAH*
JGI25384J37096_100568973	3300002561	Grasslands Soil	MXRLPTTRIGVKRIVIEVNRDLTVEXLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH*
JGI25382J37095_100052943	3300002562	Grasslands Soil	MRPYHSFSIGPPSERTLPKMPRLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNHEPHKARTPRVSHPTWRIGHDSQSGSLSAH*
JGI25382J37095_100503471	3300002562	Grasslands Soil	LWKDAPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKPRTPRVSHPTWRIGHDSQSGSLSAH*
JGI25382J43887_101017143	3300002908	Grasslands Soil	ASNNETLSFLFYRTSLWKDGPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH*
JGI25382J43887_101027931	3300002908	Grasslands Soil	MARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKPRTPRVSHPTWRIGHDSQSGSLSAH*
JGI25390J43892_100001402	3300002911	Grasslands Soil	MPPRPPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKARTPRVSHPTWRIGHDSQSSSLSTH*
JGI25390J43892_100082373	3300002911	Grasslands Soil	DLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH*
JGI25386J43895_101275151	3300002912	Grasslands Soil	MARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKPRTPRPSHPTWRIGHDSQSGSLSAH*
JGI25617J43924_103404001	3300002914	Grasslands Soil	MPRLPTTRIGVKRIVIEVNRDXTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTQRVSHPTWRIGRESQSGSLSAH*
Ga0066683_102493661	3300005172	Soil	VIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH*
Ga0066680_100637063	3300005174	Soil	MTRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH*
Ga0066680_104330022	3300005174	Soil	MRPYRSSSTGPLWKDGPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH*
Ga0066690_108379041	3300005177	Soil	SNNETLSFLFYRTSLWKDGPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNREPHKPRTPRPSHPTWRIGHDSQSGSLSAH*
Ga0066688_102903331	3300005178	Soil	SLWKDGPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNREPHKPRTPRPSHPTWRIGHDSQSGSLSAH*
Ga0066685_100010263	3300005180	Soil	MPPRPPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKARTPRVSHPTWRIGRDSQSSSLSTH*
Ga0066685_101368911	3300005180	Soil	MQLSNNETLSFLFYRTSLWKDGPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNREPHKPRTPRPSHPTWRIGHDSQSGSLSAH*
Ga0066676_111368201	3300005186	Soil	VKRIVIEVNRDLTVEQFEILDDALKRAGLVKETKVTFHNHEPRKPRTPRVSHPTWRIGHESQSGSLSAH*
Ga0070707_10000143914	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTVRVPHHPTWRIGHDSQSSSMSAH*
Ga0070707_1005666873	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLPTTRIGVKRIVIEVNRDLTVEQFEILDDALKRAGLVKETKVTFHNHEPRKPRTPRVSHPTWRIGHDSQSGSLSAH*
Ga0066697_100762032	3300005540	Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQFEILDDALKRAGLVKETKVTFHNHEPRKPRTPRVSHPTWRIGHESQSGSLSAH*
Ga0066704_101168742	3300005557	Soil	PSVRRGLVLGRFLRESYFMRASNNETIVPILQDLLWKDAPKLARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKPRTPRVSHPTWRIGHDSQSGSLSAH
Ga0066704_103792983	3300005557	Soil	KRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRMPRPSHPTWRIGHDSQSGSMSAH*
Ga0066700_100787243	3300005559	Soil	MQLSNNETLSFLFYRTSLWKDGPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH*
Ga0066700_102203301	3300005559	Soil	MARLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGRDSQSGSMSAH*
Ga0066691_104218341	3300005586	Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNRESHKPRMPRVSHPTWRIGHDSQSGSLSAH*
Ga0066706_114686592	3300005598	Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHSREAHKPRMPRVSHPTWRI
Ga0066665_108522992	3300006796	Soil	MPRLPTTRIGVTRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKPRTPRVSHPTWRIGHDSQSGSMSAH*
Ga0066665_110451252	3300006796	Soil	MQLSNNETLSFLFYRTSLWKDGPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNREPHKPRTPRPSHPTWRIGHDSQSG
Ga0066665_112017151	3300006796	Soil	LIVPILQDLLWKDAPKLARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKPRTPRVSHPTWRIGHDSQSGSLSAH*
Ga0066659_111578021	3300006797	Soil	LPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKPRTPRPSHPTWRIGHDSQSG
Ga0099791_106903832	3300007255	Vadose Zone Soil	GVKRIVIEVNRDLTVEQLEILDDALKKAGLVKETKVTFHNHEPRKPRTPRVSHPTWRIGRESQSGSLSAH*
Ga0099793_100566963	3300007258	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKKAGLVKETKVTFHNHEPRKPRTPRVSHPTWRIGRESQSGSLSAH*
Ga0099793_100813422	3300007258	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTQRVSHPTWRIGRENQSGSLSAH*
Ga0099794_100361422	3300007265	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTSRVSHPTWRLGRESQSSTLSGH*
Ga0099794_104168372	3300007265	Vadose Zone Soil	GVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKARTQRVSHPTWRIGRESQSGSLSAH*
Ga0099794_106589882	3300007265	Vadose Zone Soil	SKMPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTQRVSHPTWRIGRESQSGSLSAH*
Ga0066710_1047506521	3300009012	Grasslands Soil	MPPRPPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKARTPRVSHPTWRIGHDSQ
Ga0099829_100160082	3300009038	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPHKARTPRASHPTWRIGHESHSGSLSAH*
Ga0099830_100576133	3300009088	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTQRVSHPTWRIGRESQSGSLSAH*
Ga0099830_104165421	3300009088	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTQRVSHPTWRISRESQSGSLSAH*
Ga0099830_105916331	3300009088	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPHKPRTPRVSHPTWRIGRESQSGSLSSH*
Ga0099828_100008993	3300009089	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHETRKPRTPRVSHPTWRIGRESQSGSLSSH*
Ga0099828_108237272	3300009089	Vadose Zone Soil	SLCKDALQMPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPHKPRTPRVSHPTWRIGRESQSGSLSSH*
Ga0134088_102041722	3300010304	Grasslands Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTQRVSHPTWRIGRDSQSGSLSAH*
Ga0137391_112547681	3300011270	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQFEILDDALKRAGLVKETKVTFHNHEPRKPRTPRVSHPTWRIGHESQSGSL
Ga0137393_107724181	3300011271	Vadose Zone Soil	RRGISKMPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTQRVSHPTWRIGRENQSGSLSAH*
Ga0137389_100194812	3300012096	Vadose Zone Soil	MRPYHSLSMRPPSERNALQMPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPHKPRTPRVSHPTWRIGRESQSGSLSSH*
Ga0137389_103039301	3300012096	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREVHKPRTTRVSHPTWRIGHDSQSGSMSAH*
Ga0137389_103385112	3300012096	Vadose Zone Soil	GVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTPRVSHPTWRIGHESQSGSLSAH*
Ga0137363_101049281	3300012202	Vadose Zone Soil	IEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTQRVSHPTWRIGRENQSGSLSAH*
Ga0137363_105344282	3300012202	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPHKARTPRVSHPTWRIGRESQTGSLSSH*
Ga0137399_102323753	3300012203	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQFEILDDALKRAGLVKETKVTFHNHEPRKPRTTRVSHPTWRIGHESQSGSLSAH*
Ga0137362_117903421	3300012205	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPHKARTARVSHPTWRIGRESQTGSLSSH*
Ga0137380_113739911	3300012206	Vadose Zone Soil	MARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIG
Ga0137369_106707863	3300012355	Vadose Zone Soil	ETLSFLFYRTSLWKDASKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNREPHKPRTPRPSHPTWRIGHDSQSGSLSAH*
Ga0137384_104243431	3300012357	Vadose Zone Soil	EQLEILDDALKREGLVKETKVTFHNLEAHKPRTPRPAHPTWRIGHDSQSGSMSAH*
Ga0137384_106586432	3300012357	Vadose Zone Soil	MARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDS
Ga0137385_107906471	3300012359	Vadose Zone Soil	MARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSG
Ga0137390_119026311	3300012363	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQFEILDDALKRAGLVKETKVTFHNHEPRKLRMPKVSHPTWRIGHESQSGSLSAH*
Ga0137416_102577283	3300012927	Vadose Zone Soil	KRIVIEVNRDLTVEQFEILDDALKRAGLVKETKVTFHNHEPRKPRTPRVSHPTWRIGRESQSGSLSAH*
Ga0137416_112231261	3300012927	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRVGLVKETKVTFHSHESRKPRTPRVSHPTWRLGRESQSSTLSGH*
Ga0134110_100837274	3300012975	Grasslands Soil	MQLSNNETLSFLFYRTSLWKDGPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKPRTQRPSHPTWRIGHDSQSGSLSAH*
Ga0134110_105802411	3300012975	Grasslands Soil	GVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKARTPRVSHPTWRIGHESQSGSLSAH*
Ga0134075_101751071	3300014154	Grasslands Soil	MARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNRESHKPRTPRPSHPTWRIGHDSQSGSLSAH*
Ga0134089_104270072	3300015358	Grasslands Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTQRVSHPTWRIGRESQSGSVSAH*
Ga0134069_12334611	3300017654	Grasslands Soil	MARLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNREPHKPRTPRPSHPTWRIGHDSQSGSLSAH
Ga0066662_115277431	3300018468	Grasslands Soil	IAFSGNPIVKQASNNETLSFIFYRTSLWKDGPKMTRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH
Ga0215015_107164311	3300021046	Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHDPRKPRTAKVSHHPVWRIGHDSQPGSMSAH
Ga0210404_100010456	3300021088	Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVQETKVTFHNHEPRKPRTAKVSHHPVWRIGHDSPSGSMSAH
Ga0242660_11379861	3300022531	Soil	RTCIHEVILEMPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVQETKVTFHNHEPRKPRTAKVSHHPVWRIGHDSPSGSMSAH
Ga0137417_11083512	3300024330	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKSRTPRVSHPTWRLGRESQSSTLSGH
Ga0207646_101062212	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLPTTRIGVKRIVIEVNRDLTVEQFEILDDALKRAGLVKETKVTFHNHEPRKLRTPRVSHPTWRIGHESQSGSLSAH
Ga0207646_101215182	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VPKEGILEVPRLPSTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTARVSHHPVWRIGHDSPSGSMSSH
Ga0209350_100107412	3300026277	Grasslands Soil	MPPRPPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKARTPRVSHPTWRIGRDSQSSSLSTH
Ga0209237_10099633	3300026297	Grasslands Soil	MRPYHSFSIGPPSERTLPKMPRLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNHEPHKARTPRVSHPTWRIGHDSQSGSLSAH
Ga0209238_10197683	3300026301	Grasslands Soil	MARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH
Ga0209055_10537323	3300026309	Soil	MQLSNNETLSFLFYRTSLWKDGPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNREPHKPRTPRPSHPTWRIGHDSQSGSLSAH
Ga0209055_12901471	3300026309	Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNRESHKPRMPRVSHPTWRIGHDSQSGSLSAH
Ga0209239_100004054	3300026310	Grasslands Soil	MPPRPPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKARTPRVSHPTWRIGHDSQSSSLSTH
Ga0209267_10320391	3300026331	Soil	RTSLWKDGPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNREPHKPRTPRPSHPTWRIGHDSQSGSLSAH
Ga0209267_11068023	3300026331	Soil	RTSLWKDGPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH
Ga0209803_10341121	3300026332	Soil	MTRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH
Ga0209158_10378663	3300026333	Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKPRMPRVSHPTWRIGHDSQSGSMSAH
Ga0209158_11578211	3300026333	Soil	IVFSGNPIVKRASNNETLSFLFYRTSLWKDGPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH
Ga0257179_10193321	3300026371	Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTQRVSHPTWRIGRESQSGSLSAH
Ga0257177_10075701	3300026480	Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQFEILDDALKRAGLVKETKVTFHNHEPRKPRTQRVSHPTWRIGHESQSGSLSAH
Ga0209690_11567202	3300026524	Soil	RGNPIVIRLSNNETLSFLLDRTSLKDASNLPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGHDSQSGSMSAH
Ga0209059_12229761	3300026527	Soil	VTDLVAFRGNPIVIRLSNNETLSFLLDRTSLKDASNLPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKPRTQRPSHPTWRIGHDSQSGSLSAH
Ga0209056_104740522	3300026538	Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREPHKPRMPRVSHPTWRIG
Ga0209805_10433342	3300026542	Soil	TLSFLVHRTSLWKDAPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGRDSQSGSMSAH
Ga0209161_100371813	3300026548	Soil	MARLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREGHKPRTPRPSHPTWRIGHDSQSGSMSAH
Ga0209648_101433302	3300026551	Grasslands Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNREVHRPRTTRVSHPVWRIGHDSQSGSMSAH
Ga0209648_102981333	3300026551	Grasslands Soil	GVKRIVIEVNRDLTVEQLEILDDALKRAGLAKETKVTFHNHEPRRPRTQKVSHPTWRIGRESQSGSLSAH
Ga0209577_100257231	3300026552	Soil	SNNETLSFLFYRTSLWKDGPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNREPHKPRTPRPSHPTWRIGHDSQSGSLSAH
Ga0209076_10220763	3300027643	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKKAGLVKETKVTFHNHEPRKPRTPRVSHPTWRIGRESQSGSLSAH
Ga0209076_10281551	3300027643	Vadose Zone Soil	VKRIVIEVNRDLTVEQFEILDDALKRAGLVKETKVTFHNHEPRKPRTPRVSHPTWRIGHESQSGSLSAH
Ga0209076_10961691	3300027643	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTQRVSHPTWRIGRENQSGSLSAH
Ga0209588_100004939	3300027671	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQFEILDDALKRAGLVKETKVTFHNHEPRKPRTPRVSHPTWRIGHESQSGSLSAH
Ga0209689_11225933	3300027748	Soil	HRTSLWKDAPKMARLPTTRIGVKRIVIEVNRDLTVEQLEILDEALKRAGLVKETKVTFHNREAHKPRTPRPSHPTWRIGRDSQSGSMSAH
Ga0209180_100897322	3300027846	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPHKARTPRASHPTWRIGHESHSGSLSAH
Ga0209180_101276343	3300027846	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPHKPRTPRVSHPTWRIGRESQSGSLSSH
Ga0209283_100041539	3300027875	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHETRKPRTPRVSHPTWRIGRESQSGSLSSH
Ga0137415_114207892	3300028536	Vadose Zone Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRAGLVKETKVTFHNHEPRKPRTQRVSHPTWRIGRESQSG
Ga0307469_100766142	3300031720	Hardwood Forest Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQFEILDDALKRAGLVKETKVTFHNHEPRKPRTTRVSHPTWRIGHESQSGSLSAH
Ga0307471_1041370211	3300032180	Hardwood Forest Soil	MPRLPTTRIGVKRIVIEVNRDLTVEQLEILDDALKRVGLVKETKVTFHNHEPRKPRTTRVSHPTWRIGHDSQSGSLSAH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091694

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences