Metagenome Family F091686

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091686
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	98 residues
Representative Sequence	MGLEVVVPRVASVELAALLHRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLALH
Number of Associated Samples	93
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.40 %
% of genes near scaffold ends (potentially truncated)	28.97 %
% of genes from short scaffolds (< 2000 bps)	80.37 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.83

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.019 % of family members)
Environment Ontology (ENVO)	Unclassified (19.626 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.252 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.80% β-sheet: 28.00% Coil/Unstructured: 51.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.83
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.83
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SCOP family	SCOP domain	Representative PDB	TM-score
c.43.1.1: CAT-like	d1scza_	1scz	0.61593
d.129.3.5: AHSA1 domain	d2nn5a1	2nn5	0.61589
d.105.1.1: Clathrin adaptor appendage, alpha and beta chain-specific domain	d2g30a2	2g30	0.61185
c.43.1.0: automated matches	d3l60a_	3l60	0.60293
d.129.6.1: Kinase associated domain 1, KA1	d3osea_	3ose	0.60104

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02746	MR_MLE_N	22.43
PF13378	MR_MLE_C	13.08
PF07690	MFS_1	10.28
PF13502	AsmA_2	4.67
PF00106	adh_short	3.74
PF07978	NIPSNAP	3.74
PF00579	tRNA-synt_1b	2.80
PF01243	Putative_PNPOx	1.87
PF00248	Aldo_ket_red	0.93
PF04055	Radical_SAM	0.93
PF00849	PseudoU_synth_2	0.93
PF00484	Pro_CA	0.93
PF00753	Lactamase_B	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	44.86
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.80
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.80
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.93
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.93
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	36.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.54 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.87 %
Unclassified	root	N/A	1.87 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	36.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.54 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.87 %
Unclassified	root	N/A	1.87 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	36.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.54 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.87 %
Unclassified	root	N/A	1.87 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	36.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.54 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	1.87 %
Unclassified	root	N/A	1.87 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	36.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.54 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1.87 %
Unclassified	root	N/A	1.87 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	36.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.54 %
Gemmata	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	1.87 %
Unclassified	root	N/A	1.87 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	36.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.54 %
Gemmata massiliana	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → Gemmata massiliana	1.87 %
Unclassified	root	N/A	1.87 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003995\|Ga0055438_10207811	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300004157\|Ga0062590_101388506	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300004463\|Ga0063356_100102499	All Organisms → cellular organisms → Bacteria	3110	Open in IMG/M
3300004463\|Ga0063356_100459677	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300004463\|Ga0063356_103971219	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300004480\|Ga0062592_101429353	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300004643\|Ga0062591_102951832	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → Gemmata massiliana	505	Open in IMG/M
3300004778\|Ga0062383_10722230	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → Gemmata massiliana	510	Open in IMG/M
3300005332\|Ga0066388_100106137	All Organisms → cellular organisms → Bacteria	3289	Open in IMG/M
3300005332\|Ga0066388_100256674	All Organisms → cellular organisms → Bacteria	2388	Open in IMG/M
3300005332\|Ga0066388_103751058	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005335\|Ga0070666_10900341	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005365\|Ga0070688_100563195	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005441\|Ga0070700_100098287	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300005451\|Ga0066681_10035224	All Organisms → cellular organisms → Bacteria	2669	Open in IMG/M
3300005457\|Ga0070662_101951022	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005468\|Ga0070707_100630797	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300005529\|Ga0070741_10019139	All Organisms → cellular organisms → Bacteria	10974	Open in IMG/M
3300005546\|Ga0070696_100969198	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300005563\|Ga0068855_102470854	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300005598\|Ga0066706_10392412	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300005615\|Ga0070702_101547565	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005617\|Ga0068859_100221216	All Organisms → cellular organisms → Bacteria	1981	Open in IMG/M
3300005713\|Ga0066905_102286987	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300005718\|Ga0068866_10874365	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005719\|Ga0068861_102542378	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300005764\|Ga0066903_101003345	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300005764\|Ga0066903_103766397	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	815	Open in IMG/M
3300005764\|Ga0066903_104513039	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300005840\|Ga0068870_10804347	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300006796\|Ga0066665_11555896	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300006844\|Ga0075428_100318704	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300006845\|Ga0075421_100181685	All Organisms → cellular organisms → Bacteria	2615	Open in IMG/M
3300006845\|Ga0075421_100367509	All Organisms → cellular organisms → Bacteria	1735	Open in IMG/M
3300006845\|Ga0075421_102802775	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300006847\|Ga0075431_100848292	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300006852\|Ga0075433_11022444	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300006871\|Ga0075434_100619361	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300006880\|Ga0075429_101168562	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300006904\|Ga0075424_101303553	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300009012\|Ga0066710_100060013	All Organisms → cellular organisms → Bacteria	4791	Open in IMG/M
3300009012\|Ga0066710_100107459	All Organisms → cellular organisms → Bacteria → Proteobacteria	3756	Open in IMG/M
3300009012\|Ga0066710_100191983	All Organisms → cellular organisms → Bacteria	2897	Open in IMG/M
3300009089\|Ga0099828_11918219	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300009094\|Ga0111539_10264644	All Organisms → cellular organisms → Bacteria	2002	Open in IMG/M
3300009100\|Ga0075418_10171338	All Organisms → cellular organisms → Bacteria → Proteobacteria	2311	Open in IMG/M
3300009137\|Ga0066709_100689672	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300009137\|Ga0066709_101056080	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1192	Open in IMG/M
3300009147\|Ga0114129_10000617	All Organisms → cellular organisms → Bacteria	44123	Open in IMG/M
3300009147\|Ga0114129_10023449	All Organisms → cellular organisms → Bacteria	8750	Open in IMG/M
3300009156\|Ga0111538_10345726	All Organisms → cellular organisms → Bacteria	1882	Open in IMG/M
3300009174\|Ga0105241_10800358	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300010359\|Ga0126376_10305112	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1387	Open in IMG/M
3300010366\|Ga0126379_13545027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	523	Open in IMG/M
3300010376\|Ga0126381_103382798	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	628	Open in IMG/M
3300010398\|Ga0126383_11641847	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M
3300010398\|Ga0126383_12142173	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	646	Open in IMG/M
3300012948\|Ga0126375_11423730	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300012971\|Ga0126369_10716388	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1079	Open in IMG/M
3300012971\|Ga0126369_13178090	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300012972\|Ga0134077_10384447	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	604	Open in IMG/M
3300015371\|Ga0132258_10128936	All Organisms → cellular organisms → Bacteria	6027	Open in IMG/M
3300015372\|Ga0132256_100124270	Not Available	2551	Open in IMG/M
3300015373\|Ga0132257_100510970	Not Available	1475	Open in IMG/M
3300015374\|Ga0132255_100448032	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300016404\|Ga0182037_10981437	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	735	Open in IMG/M
3300018060\|Ga0187765_10192092	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300018081\|Ga0184625_10060486	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300019458\|Ga0187892_10061122	All Organisms → cellular organisms → Bacteria	2488	Open in IMG/M
3300021560\|Ga0126371_12789099	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300025324\|Ga0209640_10843641	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	718	Open in IMG/M
3300025933\|Ga0207706_10683668	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	877	Open in IMG/M
3300025936\|Ga0207670_10964431	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	716	Open in IMG/M
3300025937\|Ga0207669_10407526	All Organisms → cellular organisms → Bacteria → Proteobacteria	1067	Open in IMG/M
3300026075\|Ga0207708_10674055	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300027682\|Ga0209971_1010691	All Organisms → cellular organisms → Bacteria	2173	Open in IMG/M
3300027876\|Ga0209974_10037273	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300027909\|Ga0209382_10184673	All Organisms → cellular organisms → Bacteria → Proteobacteria	2397	Open in IMG/M
3300028587\|Ga0247828_10264410	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	931	Open in IMG/M
3300028589\|Ga0247818_10868539	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	633	Open in IMG/M
3300028596\|Ga0247821_11100772	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300028809\|Ga0247824_10778925	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300028889\|Ga0247827_11019791	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300031198\|Ga0307500_10130118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	702	Open in IMG/M
3300031543\|Ga0318516_10165083	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300031572\|Ga0318515_10015615	All Organisms → cellular organisms → Bacteria → Proteobacteria	3506	Open in IMG/M
3300031573\|Ga0310915_10363280	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300031740\|Ga0307468_101089764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	711	Open in IMG/M
3300031768\|Ga0318509_10192884	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1132	Open in IMG/M
3300031778\|Ga0318498_10561314	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300031779\|Ga0318566_10011462	All Organisms → cellular organisms → Bacteria → Proteobacteria	3688	Open in IMG/M
3300031781\|Ga0318547_10074935	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1883	Open in IMG/M
3300031908\|Ga0310900_10752182	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	785	Open in IMG/M
3300031941\|Ga0310912_10606102	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	852	Open in IMG/M
3300031942\|Ga0310916_10282461	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1404	Open in IMG/M
3300031949\|Ga0214473_10805125	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300032041\|Ga0318549_10181864	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300032052\|Ga0318506_10407374	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	603	Open in IMG/M
3300032065\|Ga0318513_10145121	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300032075\|Ga0310890_10498076	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300032180\|Ga0307471_102256062	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	686	Open in IMG/M
3300032205\|Ga0307472_102542894	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300033233\|Ga0334722_10095811	All Organisms → cellular organisms → Bacteria	2259	Open in IMG/M
3300033550\|Ga0247829_10255637	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300033551\|Ga0247830_10642729	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	841	Open in IMG/M
3300034147\|Ga0364925_0170228	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	796	Open in IMG/M
3300034148\|Ga0364927_0123493	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.22%
Host-Associated	Host-Associated	31.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.49%
Plants	Host-Associated → Plants	31.78%
Aquatic	Environmental → Aquatic	3.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.15%
Freshwater	Environmental → Aquatic → Freshwater	1.87%
Floodplain	Environmental → Terrestrial → Floodplain	1.87%
Marine	Environmental → Aquatic → Marine	0.93%
Sediment	Environmental → Aquatic → Sediment	0.93%
Cave	Environmental → Terrestrial → Cave	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.95%
Loam	Environmental → Terrestrial → Soil → Loam	14.02%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.87%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.35%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.67%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.93%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.93%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.93%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055438_102078112	3300003995	Natural And Restored Wetlands	MGLEVIVPRVSSVGLARLLDRLTAAGLPSAVAMVDNVLQGPGASPPETWRDARLRTPAGVVTLRRVPSGVAVVIFGNADDALRAAQRTIAETLLTLH*
Ga0062590_1013885062	3300004157	Soil	MGLEVVVPRVASVELAALLHRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLALH*
Ga0063356_1001024991	3300004463	Arabidopsis Thaliana Rhizosphere	MGLEVVVPRVAAVDMRALLDRLAEAGLPSTLAMVDNVLQGPGAAAPVAWHDVRLRTPAGTVTLRRIPSGIAVVVFGNAEPPLRAAQRTIAE
Ga0063356_1004596772	3300004463	Arabidopsis Thaliana Rhizosphere	MGLEVVVPRVSSVPLATLLDRLAAAGLPSALAMVDNVLQGPGATPPASWRDARLRTPAGVVTLRRVPSGIAIVVFGNADEPLRSAQRTIAETLLTLH*
Ga0063356_1039712191	3300004463	Arabidopsis Thaliana Rhizosphere	MGLEVVVPRVASVELAALLHRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADESLRAAQRTIAETLLALH*
Ga0062592_1014293531	3300004480	Soil	MGLEVVVPRVASVELAVLLHRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLALH*
Ga0062591_1029518321	3300004643	Soil	MGLEVVVPRVASVELAALLDQLGTAGLPSALAMVDNVLQGPGALPPAVWRDARIRTPAGIVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLALQ*
Ga0062383_107222301	3300004778	Wetland Sediment	AGAEESPRVGLEIVVPRRTPCSLPAVLAHLATAGLTASVAMVDNVLQGPGSTPPAQWREVRLRSPAGVVTLRRTGEAVSVVVFGNATPELQAAQRLVAEAVGALR*
Ga0066388_1001061373	3300005332	Tropical Forest Soil	MGLEILVPRHGPCPLPPLLQSLADSGLSATVAMVDNVLQGPGASPPAAWRDVRLRTPSGVVALRKTPSGVAVIVFGNADEGLQAAQRAVADAVRRTHSLDP*
Ga0066388_1002566742	3300005332	Tropical Forest Soil	MGLEVVVPRVASVGLPTLLERLATAGLPSTLAMVDNVLQGPGATPPSTWRDARLRTPAGIVTLRRVPSGVAVVIFGNADGPLRAAQQTIAETLLSLH*
Ga0066388_1037510582	3300005332	Tropical Forest Soil	MGLEVVVPRVASVGLATLLERLATAGLPSTLAMVDNVLQGPGATPPGTWRDARLRTPAGIVTLRRVPSGVAVVIFGNADGPLRAAQQTIAETLLSLH*
Ga0070666_109003412	3300005335	Switchgrass Rhizosphere	MGLEVVVPRVASVELAALLHRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLGLH*
Ga0070688_1005631951	3300005365	Switchgrass Rhizosphere	MGLEVVVPRVASVELAALLHRLGAAGLPSALAMVDNVLQGPGAIPPVVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLALH*
Ga0070700_1000982871	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MGLEVVVPRVASVELAVLLHRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLGLH*
Ga0066681_100352242	3300005451	Soil	MGLEIVVPRQGPCPLPPVLQALAAAGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVIALRRTPSGVSIVVFGNADESLQTAQRAVANAMRQASGLGPSPAR*
Ga0070662_1019510222	3300005457	Corn Rhizosphere	PRVASVELAALLHRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLALH*
Ga0070707_1006307971	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGLEIVVPRQGPCPLPPVLQALAAAGLPTSVAMVDNVLQGPGARPPAHWRDVRLRTPAGVIALRRTPSGVSVVVFGNADEGLQAA
Ga0070741_100191394	3300005529	Surface Soil	MGLEVVVPRLGSVGLGTLIERLAAAGLPASVAMVDNVLQGPGATPPAAWRDVRLRTPAGVIALRRVQSGVAVVVFGNADERLQAAQRTIAETLVGLP*
Ga0070696_1009691982	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	PPAASVPLPRSDRPAAMGLEVVVPRVASVELAALLDRLGAAGLPSGLAMVDNVLQGPGATPPPVWRDARLRTPAGIVTLRRVPSGVAVVIFGNADEPLRAAQRTVAETLLALH*
Ga0068855_1024708542	3300005563	Corn Rhizosphere	MGLEVVVPRVASVELAALLHRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGIVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLGLH*
Ga0066706_103924122	3300005598	Soil	MGLEIVVPRQGPCPLPPVLQALAAAGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVIALRRTPSGVSIVVFGNADESLQAAQRAVANVMRQASGLGPSPAR*
Ga0070702_1015475651	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VELAALLHRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGIVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLGLH*
Ga0068859_1002212161	3300005617	Switchgrass Rhizosphere	RVASVELAALLYRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLGLH*
Ga0066905_1022869872	3300005713	Tropical Forest Soil	MGLELVVPRVSAVGLATLLDRLAAAGLPSTLAMVDNVLQGPGATPPGTWRDVRLRTPAGIVTLRRVPNGVAVVIFGNAEEPLRAAQQTIAETLLGLQ*
Ga0068866_108743652	3300005718	Miscanthus Rhizosphere	RRRAMGLEVVVPRVASVELAALLHRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLALH*
Ga0068861_1025423782	3300005719	Switchgrass Rhizosphere	MGLEVVVPRVASVKLAALLDQLSAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLALQ*
Ga0066903_1010033452	3300005764	Tropical Forest Soil	MGLEVVVPRVSSVGLATLLDRLATAGLPSTLAMVDNVLQGPGATPPATWRDVRLRTPAGIVTLRRVPSGVAVVIFGNAEEPLRAAQQTIAETLLGLQ*
Ga0066903_1037663972	3300005764	Tropical Forest Soil	VGLEVVVPRVAAVGLATLLDRLAAAGLPSALAMVDNVLQGPGATPPASWRDARLRTPAGIVTLRRVPSGVAVVVFGNADEPLRTAQRTIAETLLTLH*
Ga0066903_1045130392	3300005764	Tropical Forest Soil	MGLEVVVPRVASVGLATLLDRLATAGLPSTLAMVDNVLQGPGATPPSTWRDARLRTPAGIVTLRRVPSGVAVVIFGNADGPLRAAQQTIAETLLSLH*
Ga0068870_108043472	3300005840	Miscanthus Rhizosphere	LAVLLHRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLALH*
Ga0066665_115558962	3300006796	Soil	VRRHGLPLPRPHRGLGLGERAPAAMGLEIVVPRQGPCPLPPVLQALAAAGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVIALRRTLSGVSVVVFGNADEGLQAAQRAVANAMRQASGLGPSPAR*
Ga0075428_1003187042	3300006844	Populus Rhizosphere	MGLEVVVPRVASVELAALLDQLSAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLALQ*
Ga0075421_1001816853	3300006845	Populus Rhizosphere	MGLEVVVPRASSVALATLLDRLTAAGLPSALAMVDNVLQGPGATPPASWRDARLRTPAGVVTLRRVPSGVAVVVFGNADDRLRAAQRTIAETLLALH*
Ga0075421_1003675092	3300006845	Populus Rhizosphere	MGLEVVVPRVATVDIRALLDRLAEAGLPSTLAMVDNVLQGPGAAAPVAWHDVRLRTPAGTVTLRRIPSGIAVVVFGNAEPPLRAAQRTIAETLLGLH*
Ga0075421_1028027752	3300006845	Populus Rhizosphere	RRLAMGLEVVVPRVASVELAALLDQLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLARH*
Ga0075431_1008482921	3300006847	Populus Rhizosphere	LEVVVPRASSVALATLLDRLAAAGLPSALAMVDSVLQGPGATPPASWRDARLRTPAGVVTLRRVPSGVAVVVFGNADDRLRAAQRTIAETLLALH*
Ga0075433_110224442	3300006852	Populus Rhizosphere	MGLEVVVPRVSSVGLATLLDRLAAAGLPSALAMVDNVLQGPGATPPAAWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLTLH*
Ga0075434_1006193612	3300006871	Populus Rhizosphere	MGLEVVVPRVSSVGLATLLDRLATAGLPSTLAMVDNVLQGPGATPPATWRDARLRTPAGIVTLRRVPSGVAVVIFGNADGPLRAAQQTIAETLLSLH*
Ga0075429_1011685622	3300006880	Populus Rhizosphere	MGLEVVVPRVASVELAALLDQLSAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAE
Ga0075424_1013035531	3300006904	Populus Rhizosphere	MGLEVVVPRVASVELAALLHRLGAAGLPSALAMVDNVLQGPGAIPPVVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLGLH*
Ga0066710_1000600133	3300009012	Grasslands Soil	VGLEILVARRAPCPLAPVLERLAEAGLPSTIAMVDNVLQGPGATPPAQWRDVRLRTPAGMLTLRRIPSGVAVVVFGNADVALQEAQRTVAEAVRTTP
Ga0066710_1001074592	3300009012	Grasslands Soil	MGLEIVVPRQGPCPLPPVLQALAAAGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVIALRRTPSGVSVAVFGNADEGLQAGQRAVANAMRQASGLGPSPAG
Ga0066710_1001919831	3300009012	Grasslands Soil	MGLEIVVPRQGPCPLPPVLQALAAAGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVIALRRTPSGVSIVVFGNADESLQAAQRAVANAMRQASGLGPSPAR
Ga0099828_119182192	3300009089	Vadose Zone Soil	MGLEIVVPRHGPCPLLAVLETLSAGGLPSTVAMVDNVLQGPGARPPAQWRDVRLRTPAGVVTLRRMPSGVAVVIFGNADEKLQAAQRTVADAVRGA
Ga0111539_102646442	3300009094	Populus Rhizosphere	MGLEVVVPRVASVELAALLDQLSAAGLPSALAMVDNVLQGPGAIPPAIWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLALQ*
Ga0075418_101713382	3300009100	Populus Rhizosphere	MGLEVVVPRVASVELAALLDQLSAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLALH*
Ga0066709_1006896722	3300009137	Grasslands Soil	MGLEIVVPRQGPCPLPPVLQALAAAGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVIALRRTPSGVSVAVFGNADEGLQAAQRAVANAMRQASGLGPSPAG*
Ga0066709_1010560802	3300009137	Grasslands Soil	VGLEILVARRAPCPLAPVLERLAEAGLPSTIAMVDNVLQGPGATPPAQWRDVRLRTPAGMLTLRRIPSGVAVVVFGNADVALQEAQRTVAEAVRTTP*
Ga0114129_1000061712	3300009147	Populus Rhizosphere	MGLEVVVPRVSSVGLATLLDRLAAAGLPSALAMVDNVLQGPGATPPAAWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLALH*
Ga0114129_100234496	3300009147	Populus Rhizosphere	VGLEIVVPRPGPCRLGPVLAALAAAGLPSAVAMVDNALRPAQAPPPDDWRDVRLRTPAGMIALRRHSGGIAVVVFGNADAALQAAQQAVVDALRTPA*
Ga0111538_103457262	3300009156	Populus Rhizosphere	MGLEVVVPRVASVELAALLDQLSAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLARH*
Ga0105241_108003582	3300009174	Corn Rhizosphere	MGLEVVVPRVASVELAALLDRLGAAGLPSGLAMVDNVLQGPGATPPPVWRDARLRTPAGIVTLRRVPSGVAVVIFGNADEPLRAAQRTVAETLLALH*
Ga0126376_103051122	3300010359	Tropical Forest Soil	MGLEVVVPRVASVGLATLLERLASAGLPSALAMVDNVLQGPGATPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNANEALRAAQRTIAETLVSLH*
Ga0126379_135450272	3300010366	Tropical Forest Soil	ASVGLATLLERLATAGLPSTLAMVDNVLQGPGATPPSTWRDARLRTPAGIVTLRRVPSGVAVVIFGNADGPLRAAQQTIAETLLSLH*
Ga0126381_1033827982	3300010376	Tropical Forest Soil	MGLEILVPRHGPCPLPPLLQSLADSGLSATVAMVDNVLQGPGASPPAAWRDVRLRTPSGVVALRKTPSGVAVIVFGNADEGLQAAQRAVADAVRRAHSLGP*
Ga0126383_116418471	3300010398	Tropical Forest Soil	MGLEVVVPRVASVGLATLLDRLATAGLPSTLAMVDNVLQGPGATPPSTWRDARLRTPAGIVTLRRVPSGVAVVIFGNADGPLRAAQQTIAETLLRLH*
Ga0126383_121421731	3300010398	Tropical Forest Soil	MGLEVVVPRVASVGLATLLDRLATAGLPSTLAMVDNVLQGPGATPPATWRDARLRTPAGIVTLRRVPSGVAVVIFGNADGPLRGAQQTIAET
Ga0126375_114237302	3300012948	Tropical Forest Soil	MGLEVVVPRVASVGLATLLERLATAGLPSTLAMVDNVLQGPGATPPSTWRDARLRTPAGIVTLRRVPSGVAVVIFGNADGPLRAAQQTIAETLLSLH*
Ga0126369_107163882	3300012971	Tropical Forest Soil	MGLEILVPRHGPCPLPPLLQSLADSGLSATVAMVDNVLQGPGASPPAAWRDVRLRTPSGVVALRKTPSGVAGIVFGNADESLQAAQRAVADAVRRAHSLGP*
Ga0126369_131780902	3300012971	Tropical Forest Soil	MGLEVVVPRVSSVGLATLLDRLAVAGLPSTLAMVDNVLQGPGATPPAAWRDARLRTPAGIVTLRRVPSGVAVVIFGNADDSLRGAQRTIAETLLSLH*
Ga0134077_103844472	3300012972	Grasslands Soil	EARAAAMGLEIVVPRQGPCPLPPVLQALAAAGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVIALRRTLSGVSVVVFGNADEGLQAAQRAVANAMRQASGLGPSPAR*
Ga0132258_101289365	3300015371	Arabidopsis Rhizosphere	VGLEVVVPRVASVGLATLLDRLATAGLPSALAMVDNVLQGPGATPPATWRDVRLRTPAGIVTLRRVPSGVAVVIFGNADEPLRAAQQTIAETLLSLH*
Ga0132256_1001242704	3300015372	Arabidopsis Rhizosphere	MGLEVVVSRVASVELAALLDQLSAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRIPSGVAVVVFGNADDALRAAQRTIAETLLALH*
Ga0132257_1005109701	3300015373	Arabidopsis Rhizosphere	LDQLSAAGLPSALAMVDNVLQGPGAIPPAIWRDARIRTPAGVVTLRRIPSGVAVVVFGNADDALRAAQRTIAETLLALH*
Ga0132255_1004480322	3300015374	Arabidopsis Rhizosphere	MGLEVVVPRVASVELAALLDQLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLALH*
Ga0182037_109814372	3300016404	Soil	VGLEIVVPRQGLCPLPSLIEALAAGGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVVTLRRTASGVSVVVFGNADEKLQAAQRRVAEAVRKAPNPP
Ga0187765_101920922	3300018060	Tropical Peatland	VGLEVVVPRVSSVGLATLLDRLATAGLPSTLAMVDNVLQGPGATPPATWRDARLRTPAGIVTLRRVPSGVAVVIFGNAEEPLRVAQRTIAETLLSLH
Ga0184625_100604862	3300018081	Groundwater Sediment	MGLEVVVPRVASVELAALLDQLSAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLALQ
Ga0187892_100611222	3300019458	Bio-Ooze	VGLEVVVPRVPSVGLTILLDRLAAAGLPSTLAMVDNVLQGPGATPPAAWRDVRLRTPAGVATLRRVPSGVAVVIFGNADGPLRAAQRTIAETLLAFQ
Ga0126371_127890992	3300021560	Tropical Forest Soil	MGLEILVPRHGPCPLPPLLQSLADSGLSATVAMVDNVLQGPGASPPAAWRDVRLRTPSGVVALRKTPSGVAVIVFGNADEGLQAAQRAVADAVRRTHSLDR
Ga0209640_108436411	3300025324	Soil	MGLEIVVARSHLCPLSPILERLRAAGLPSTVAMVDGVLQGPGAVPSLDWRDVRLRTPAGVVTLRRAPGGVAIVVFGNADGALQAAQRTVAEAVRLSGP
Ga0207706_106836681	3300025933	Corn Rhizosphere	MGLEVVVPRVASVELAALLHRLGAAGLPSALAMVDNVLQGPGAIPPVVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLALH
Ga0207670_109644312	3300025936	Switchgrass Rhizosphere	MGLEVVVPRVASVELAVLLHRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLALH
Ga0207669_104075262	3300025937	Miscanthus Rhizosphere	MGLEVVVPRVASVELAALLHRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLALH
Ga0207708_106740552	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MGLEVVVPRVASVELAALLYRLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLGLH
Ga0209971_10106912	3300027682	Arabidopsis Thaliana Rhizosphere	MGLEVVVPRVAAVDMRALLDRLAEAGLPSTLAMVDNVLQGPGAAAPVAWHDVRLRTPAGTVTLRRIPSGIAVVVFGNAEPPLRAAQRTIAETLLGLH
Ga0209974_100372732	3300027876	Arabidopsis Thaliana Rhizosphere	MGLEVVVPRVAAVDIRALLDRLAEAGLPSTLAMVDNVLQGPGAAAPVAWHDVRLRTPAGTVTLRRIPSGIAVVVFGNAEPPLRAAQRTIAETLLGLH
Ga0209382_101846732	3300027909	Populus Rhizosphere	MGLEVVVPRASSVALATLLDRLTAAGLPSALAMVDNVLQGPGATPPASWRDARLRTPAGVVTLRRVPSGVAVVVFGNADDRLRAAQRTIAETLLALH
Ga0247828_102644102	3300028587	Soil	MGLEVVVPRVASVELAALLDQLSAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLALH
Ga0247818_108685392	3300028589	Soil	MGLEVVVPRVASVELAALLDQLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADEGPDVLR
Ga0247821_111007722	3300028596	Soil	MGLEVVVPRVASVELAALLDQLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRIPSGVAVVVFGNADDALRAAQRTIAETLLALH
Ga0247824_107789252	3300028809	Soil	GSPAALLDQLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLALH
Ga0247827_110197912	3300028889	Soil	MGLEVVVPRVASVELAALLDQLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLALQ
Ga0307500_101301182	3300031198	Soil	MGLEVVVPRVASVELAALLDRLGAAGLPSGLAMVDNVLQGPGATPPPVWRDARLRTPAGIVTLRRVPSGVAVVIFGNADEPLRAAQRTVAETLLALH
Ga0318516_101650833	3300031543	Soil	VGLEIVVPRQGLCPLPSLIEALAAGGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVVTLRRTASGVSVAVFGNADEKLQAAQRRVAEAVRHAPNPP
Ga0318515_100156152	3300031572	Soil	VGLEIVVPRQGLCPLPSLIEALAAGGLPTSVAMVDNVLQGPGARPPAHWRDVRLRTPAGVVTLRRTASGVSVVVFGNADEKLQAAQRRVAEAVRHAPNPP
Ga0310915_103632802	3300031573	Soil	VGLEIVVPRQGLCPLPSLIEALAAGGLPTSVAMVDNVLQGPGARPPAQWRVVRLRTPAGVVTLRRTASGVSVAVFGNADEKLQAAQRRVAEAVRHAPNPP
Ga0307468_1010897642	3300031740	Hardwood Forest Soil	MGLEVVVPRVASVELAALLDQLSAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLALH
Ga0318509_101928841	3300031768	Soil	VGLEIVVPRQGLCPLPSLIEALAAGGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVVTLRRTASGVSVVVFGNADEKLQAAQRRVAEAVRHAPNPP
Ga0318498_105613141	3300031778	Soil	VGLEIVVPRQGLCPLPSLIEALAAGGLPTSVAMVDNVLQGPGARPPAHWRDVRLRTPAGVVTLRRTASGVSVVVFGNADEKLQAAQRRVA
Ga0318566_100114621	3300031779	Soil	GLEIVVPRQGLCPLPSLIEALAAGGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVVTLRRTASGVSVAVFGNADEKLQAAQRRVAEAVRHAPNPP
Ga0318547_100749353	3300031781	Soil	VGLEIVVPRQGLCPLPSLIEALAAGGLPTSVAMVDNVLQGPGARPPAHWRDVRLRTPAGVVTLRRTASGVSVAVFGNADEKLQAAQRRVAEAVRHAPNPP
Ga0310900_107521821	3300031908	Soil	VRRLAMGLEVVVPRVASVELAALLDQLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLALQ
Ga0310912_106061022	3300031941	Soil	VGLEIVVPRQGLCPLPSLIEALAAGGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVVTLRRTASGVSVVVFGNADEKLQAAQRRVAEA
Ga0310916_102824613	3300031942	Soil	VGLEIVVPRQGLCPLPSLIEALAAGGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVVTLRRTASGVSVAVFGNADEKLQAA
Ga0214473_108051252	3300031949	Soil	MGLEVVVPRASSVGLGTLLDRLAAAGLPSALAMVDNVLQGPGATPPAVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLLSLH
Ga0318549_101818642	3300032041	Soil	VGLEIVVPRQGLCPLPSLIEALAAGGLPTSVAMVDNVLQGPGARPPAHWRDVRLRTPAGVVTLRRTASGVSVAVFGNADEKLQAAQRRVAEAVRKAPNPP
Ga0318506_104073742	3300032052	Soil	SSDRWRPTRSPGGALVGLEIVVPRQGLCPLPSLIEALAAGGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVVTLRRTASGVSVVVFGNADEKLQAAQRRVAEAVRHAPNPP
Ga0318513_101451211	3300032065	Soil	AACSSSDRWRPTRSPGGALVGLEIVVPRQGLCPLPSLIEALAAGGLPTSVAMVDNVLQGPGARPPAQWRDVRLRTPAGVVTLRRTASGVSVAVFGNADEKLQAAQRRVAEAVRHAPNPP
Ga0310890_104980762	3300032075	Soil	MGLEVVVPRVASVELAALLDQLSAAGLPSALAMVDNVLQGPGAIPPAIWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLALQ
Ga0307471_1022560622	3300032180	Hardwood Forest Soil	MGLEVVVPRVSSVGLATLLDRLATAGLPSTLAMVDNVLQGPGATPPATWRDARLRTPAGIVTLRRVPSGVAVVIFGNADGPLRAAQQTIAETLLSLH
Ga0307472_1025428942	3300032205	Hardwood Forest Soil	MGLEVVVPRVASVELAALLHRLGAAGLPSALAMVDNVLQGPGAIPPVVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRAAQRTIAETLL
Ga0334722_100958113	3300033233	Sediment	MGLEVVVPRISTVGLATLLDRLAAAGLPSALAMVDNVLQGPGATPPAVWRDVRLRTPAGVVTLRRIPSGVAVVVFSNADEPLRTAQRTIAETLLTLH
Ga0247829_102556372	3300033550	Soil	MGLEVVVPRVASVELAALLDQLGAAGLPSALAMVDNVLQGPGAIPPAVWRDARIRTPAGVVTLRRVPSGVAVVVFGNADDALRAAQRTIAETLLALH
Ga0247830_106427292	3300033551	Soil	MGLEVVVPRVSSVPLVTLLDRLADAGLPSALAMVDNVLQGPGATPPVTWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRTAQRTIAQTLLALH
Ga0364925_0170228_444_737	3300034147	Sediment	MGLEVIVPRASSVGLPALLDRLATAGLPSTLAMVDNVLQGPGATPPPVWRDARLRTPAGVVTLRRVPSGVAVVVFGNADEPLRTAQRTIAETLLALH
Ga0364927_0123493_440_730	3300034148	Sediment	MGLEVIVPRASSVGLPALLDRLATAGLPSTLAMVDNVLQGPGATPPPVWRDARLRTPAGIVTLRRVPSGVAVVVFGNADEPLRTAQRTIAETLLALH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091686

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences