Metagenome Family F091685

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091685
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	78 residues
Representative Sequence	MDGIAVKLERLKREAQKEWKRKWRKKLRDAAPSSAAEWRALAAEAAGAVLKVVLIIALPFAVLVRGSVFIYEHGTRSVW
Number of Associated Samples	84
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.95 %
% of genes near scaffold ends (potentially truncated)	97.20 %
% of genes from short scaffolds (< 2000 bps)	89.72 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.327 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (37.383 % of family members)
Environment Ontology (ENVO)	Unclassified (39.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.813 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.55% β-sheet: 0.00% Coil/Unstructured: 36.45%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF14257	DUF4349	51.40
PF01878	EVE	6.54
PF01842	ACT	2.80
PF01738	DLH	1.87
PF07992	Pyr_redox_2	0.93
PF01979	Amidohydro_1	0.93
PF13147	Obsolete Pfam Family	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	6.54
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	6.54

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.33 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	43.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.61 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	43.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.61 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	42.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.61 %
Unclassified	root	N/A	4.67 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	41.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.61 %
Unclassified	root	N/A	4.67 %
Gemmatimonadetes bacterium 13_1_40CM_3_65_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_3_65_8	0.93 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002561\|JGI25384J37096_10020429	All Organisms → cellular organisms → Bacteria → Proteobacteria	2580	Open in IMG/M
3300002886\|JGI25612J43240_1025372	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	873	Open in IMG/M
3300004153\|Ga0063455_100683465	Not Available	687	Open in IMG/M
3300004808\|Ga0062381_10434647	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005166\|Ga0066674_10165666	All Organisms → cellular organisms → Bacteria → Proteobacteria	1047	Open in IMG/M
3300005172\|Ga0066683_10219008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1177	Open in IMG/M
3300005176\|Ga0066679_10084113	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300005459\|Ga0068867_100579784	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	975	Open in IMG/M
3300005471\|Ga0070698_100490435	All Organisms → cellular organisms → Bacteria → Proteobacteria	1166	Open in IMG/M
3300005536\|Ga0070697_100313780	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1349	Open in IMG/M
3300005546\|Ga0070696_101487260	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005546\|Ga0070696_102015131	Not Available	501	Open in IMG/M
3300005549\|Ga0070704_100642246	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	936	Open in IMG/M
3300005549\|Ga0070704_100777064	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	854	Open in IMG/M
3300005549\|Ga0070704_101781737	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005555\|Ga0066692_10570855	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	713	Open in IMG/M
3300005881\|Ga0075294_1008208	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	823	Open in IMG/M
3300006031\|Ga0066651_10424378	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300006034\|Ga0066656_10111350	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300006046\|Ga0066652_100078421	All Organisms → cellular organisms → Bacteria → Proteobacteria	2599	Open in IMG/M
3300006796\|Ga0066665_11560751	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300006845\|Ga0075421_100880795	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1023	Open in IMG/M
3300006852\|Ga0075433_10451970	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1132	Open in IMG/M
3300006852\|Ga0075433_10486071	All Organisms → cellular organisms → Bacteria → Proteobacteria	1087	Open in IMG/M
3300006852\|Ga0075433_11220636	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300006854\|Ga0075425_100387545	All Organisms → cellular organisms → Bacteria → Proteobacteria	1610	Open in IMG/M
3300006854\|Ga0075425_100540493	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1341	Open in IMG/M
3300006854\|Ga0075425_100703540	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1160	Open in IMG/M
3300006903\|Ga0075426_10999212	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300006904\|Ga0075424_100706424	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1076	Open in IMG/M
3300006914\|Ga0075436_100749049	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300006914\|Ga0075436_100910102	Not Available	658	Open in IMG/M
3300007255\|Ga0099791_10668011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300007258\|Ga0099793_10635690	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300007265\|Ga0099794_10688982	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300009012\|Ga0066710_102637396	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300009090\|Ga0099827_10642271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	916	Open in IMG/M
3300009098\|Ga0105245_13126429	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300009162\|Ga0075423_10173997	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300010301\|Ga0134070_10256139	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300010320\|Ga0134109_10191589	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300010323\|Ga0134086_10110185	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	979	Open in IMG/M
3300010401\|Ga0134121_10343108	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1334	Open in IMG/M
3300011269\|Ga0137392_10113828	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2149	Open in IMG/M
3300012189\|Ga0137388_10070046	All Organisms → cellular organisms → Bacteria	2919	Open in IMG/M
3300012200\|Ga0137382_10403386	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	964	Open in IMG/M
3300012203\|Ga0137399_10071262	All Organisms → cellular organisms → Bacteria	2607	Open in IMG/M
3300012203\|Ga0137399_10607492	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	920	Open in IMG/M
3300012203\|Ga0137399_11216399	Not Available	634	Open in IMG/M
3300012205\|Ga0137362_10767639	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	827	Open in IMG/M
3300012207\|Ga0137381_10321720	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1348	Open in IMG/M
3300012207\|Ga0137381_10638501	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	927	Open in IMG/M
3300012207\|Ga0137381_10677879	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	897	Open in IMG/M
3300012208\|Ga0137376_10288229	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300012208\|Ga0137376_10886728	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	766	Open in IMG/M
3300012210\|Ga0137378_10454859	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1185	Open in IMG/M
3300012210\|Ga0137378_10549484	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1063	Open in IMG/M
3300012285\|Ga0137370_10451604	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300012285\|Ga0137370_10899695	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300012354\|Ga0137366_10085562	All Organisms → cellular organisms → Bacteria	2396	Open in IMG/M
3300012357\|Ga0137384_11150292	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_3_65_8	619	Open in IMG/M
3300012357\|Ga0137384_11163228	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300012359\|Ga0137385_10412947	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1150	Open in IMG/M
3300012361\|Ga0137360_10173078	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1730	Open in IMG/M
3300012361\|Ga0137360_10609988	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300012683\|Ga0137398_11232108	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300012685\|Ga0137397_10904666	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	654	Open in IMG/M
3300012918\|Ga0137396_10188843	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300012922\|Ga0137394_10088087	All Organisms → cellular organisms → Bacteria	2603	Open in IMG/M
3300012922\|Ga0137394_10239790	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300012922\|Ga0137394_11606070	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012925\|Ga0137419_10892749	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300012925\|Ga0137419_11118085	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	657	Open in IMG/M
3300012925\|Ga0137419_11121848	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300012925\|Ga0137419_11745575	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	532	Open in IMG/M
3300012927\|Ga0137416_11643332	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300012948\|Ga0126375_10462565	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	935	Open in IMG/M
3300012972\|Ga0134077_10141029	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	956	Open in IMG/M
3300012976\|Ga0134076_10533386	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300014154\|Ga0134075_10011670	All Organisms → cellular organisms → Bacteria	3401	Open in IMG/M
3300015242\|Ga0137412_10210999	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300017997\|Ga0184610_1041739	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1329	Open in IMG/M
3300017997\|Ga0184610_1175101	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300018031\|Ga0184634_10004538	All Organisms → cellular organisms → Bacteria	4582	Open in IMG/M
3300018074\|Ga0184640_10059774	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300018076\|Ga0184609_10511468	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300018482\|Ga0066669_11208160	Not Available	682	Open in IMG/M
3300019879\|Ga0193723_1051229	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1213	Open in IMG/M
3300020022\|Ga0193733_1072532	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	968	Open in IMG/M
3300021344\|Ga0193719_10086843	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1361	Open in IMG/M
3300025910\|Ga0207684_11286227	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	603	Open in IMG/M
3300025930\|Ga0207701_11202339	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300025988\|Ga0208141_1002455	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1353	Open in IMG/M
3300026285\|Ga0209438_1157732	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300026318\|Ga0209471_1075813	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300026527\|Ga0209059_1325990	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300026528\|Ga0209378_1221280	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300026536\|Ga0209058_1112359	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1357	Open in IMG/M
3300026538\|Ga0209056_10063995	All Organisms → cellular organisms → Bacteria	3198	Open in IMG/M
3300027573\|Ga0208454_1020946	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300027671\|Ga0209588_1053127	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1311	Open in IMG/M
3300027862\|Ga0209701_10416062	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	746	Open in IMG/M
3300027909\|Ga0209382_11793323	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300027961\|Ga0209853_1171403	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300028072\|Ga0247675_1038618	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300028878\|Ga0307278_10062924	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1675	Open in IMG/M
3300033811\|Ga0364924_070757	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	766	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.98%
Host-Associated	Host-Associated	14.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.44%
Plants	Host-Associated → Plants	14.02%
Aquatic	Environmental → Aquatic	6.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.08%
Sediment	Environmental → Aquatic → Sediment	5.61%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Floodplain	Environmental → Terrestrial → Floodplain	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.08%
Loam	Environmental → Terrestrial → Soil → Loam	8.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	37.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.15%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.74%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.87%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.93%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005881	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_202	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025988	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101 (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25384J37096_100204296	3300002561	Grasslands Soil	MESVAVRFERLKREAQKEWRRKWRQTLRQAAPATSAEWRALAGDVAVALLKIVLIIALP
JGI25612J43240_10253722	3300002886	Grasslands Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPASVAEWRALGGEVVRALLKIALIIALPFAVLVRGSVFFYEHGTTSVWLALLTAAIL
Ga0063455_1006834651	3300004153	Soil	MDGVSVRLEQLKREAQKEWKRKWRKKLKQAAPKTAADWRALGLATLGAVLKVAFIILLPFVVLVRSAVFFYQHGGTPVWLAVFTAAILTGGVVTAYA
Ga0062381_104346472	3300004808	Wetland Sediment	MDGIAVKLERLKREARREWKRKWRKSAPADAAEWRALAGDAAIALLRIALIIALPFIVLVRGSVFIYEHGETAVWVALLVSGLLT
Ga0066674_101656661	3300005166	Soil	MSENRNVRAKRKFCRMDSVAVRLERLKREVQKEWRRKWRQKLRKAAPANAAEWRALGAQVLSAIGQVALIIALPFAVLVRGSVFIYEHGTRSVWLAV
Ga0066683_102190081	3300005172	Soil	MDSVAIRFARLKREAQREWKRKWRKKVRQAAPANAAEWRALAGAIAGAVMKVALIIALPFAVLVRGSVFFYEHGG
Ga0066679_100841131	3300005176	Soil	MDGIAVKLARLKREAQKEWKRKWRKKIQQAAPSTAAEWRALGAEAVGAVLKVVLIIALPFAVLVRGSVFIYEHGTRSVWLA
Ga0068867_1005797842	3300005459	Miscanthus Rhizosphere	MDGIAIKLERLKREARKEWKRKWRATTKATPAEWRALAGDIALGFVKVALIIALPFGVLVRGSVFIYEHGE
Ga0070698_1004904351	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDTVAVRLAKLKREAQKEWKRKWRKKLKDATPATSAEWRALAGDVGLAVLKVALIIALPFAVLVRGAVFIYEHGTRSVWLAVLTAAILSGCA*
Ga0070697_1003137802	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDGIAVKLERLKREVRKEWKAKWRKKLRQATPSNAAEWRALAAEAAGAVLKVVVIIALPFAVLVRGSVFIYEHGTRSVWL
Ga0070696_1014872601	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MDALAVKLERLKREAQKEWKRKWRKKLRDAAPSNAAEWRALAGAVATGLLKIALIIALPFAVLVRGAVFIYQNGETPVWLALLVAAF
Ga0070696_1020151312	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MDGIAVKLERLKREARKEWKRKWRATTKATPAEWRALAGDIAIGFLKVVLIIALPFGVLVRG
Ga0070704_1006422462	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDGIAVKLERLKREVRKEWKAKWRKKLRQATPSNAAEWRALAAEAAGAVLKVVVIIALPFAVLVRGSVFIYEHGTRSVWLAVATAG
Ga0070704_1007770641	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDGIAVKLERLKREARKEWKRKWRATTKATPAEWRALAGDIAIGFLKVVLIIALPFGVLVRGSVFIYEHGRTPVWVAVL
Ga0070704_1017817371	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDGIAVKLERLKREARKEWKRKWRATTKATPAEWRALAGDIALGFLKVALIIALPFGVLVRGSVFIYEHGET
Ga0066692_105708552	3300005555	Soil	MDSVAVRLERLKREAQKEWRRKWRQKLRKAAPANAAEWRALAVEVLSAIAKIALIIALPFAVLVRGSVFIYEHGTRSVWLGVLTAALLTG
Ga0075294_10082082	3300005881	Rice Paddy Soil	MDGVAVRLEKLKREAQKEWKRTWRKKLKQAAPKTAAEWRALGAEAIGAVLKVALIIVLPFAVLVRGSVFIYEHGTRSVWLAVFTAAILTGGVVTAYAV
Ga0066651_104243782	3300006031	Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPASAAEWRALAGEVVRALLKIALIIALPFAVLVRGSVFFYEHGTTSVWLALLTAAIL
Ga0066656_101113501	3300006034	Soil	MDGIAVKLERLKREARREWKRKWRQKLRKAAPANAAEWRALAGEVGIALLKIALIIALPFGVLVRGSVFIYEHGTRSVWLAVLTAG
Ga0066652_1000784216	3300006046	Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPANAAEWRALGVAILSGVLKLALIIALPFAVLVRGSVFFYEHGGTPVWLSLLTAAIL
Ga0066665_115607511	3300006796	Soil	LDGMDAIAVKLERLKREAQREWKRKWRQKLRQATPSNAAEWRALAGVALSTLLKIALIIALPFAVLVRGSVFIY
Ga0075421_1008807952	3300006845	Populus Rhizosphere	MDGVAVKLERLKREAQREWKRKWRQKLRQATPSSAAEWRALAGAVLGTVLKIMAIIALPFAVLVRGAVFIYRHGETSVW
Ga0075433_104519702	3300006852	Populus Rhizosphere	MCVTLCTARVRRLDAMDAIAVKLERLKREAQREWKRKWRQKLRQATPSNAAEWRALAGVVLSTLLKIALIIALPFAVLVRGSVFI
Ga0075433_104860713	3300006852	Populus Rhizosphere	MDAVAARLAKLKREVQKEWKRKWRKKLRDAAPKNAAEWKALAVEAAAAVLKVVVIIVLPFVVLVRGSV
Ga0075433_112206361	3300006852	Populus Rhizosphere	MDALAVKLERLKREAQKEWKRKWRKKLRDAAPSNAAEWRALAGAVATGLLKIALIIALPFAVLVRGAVFIYQNGETPVWLALLVAAFLSAGVVTAYAVW
Ga0075425_1003875455	3300006854	Populus Rhizosphere	MDAVAARLAKLKREVQKEWKRKWRKKLRDAAPKNAAEWKALAVEAAAAVLKVVVIIVLPFVVLVRGSVFIYEHGTRSVWL
Ga0075425_1005404931	3300006854	Populus Rhizosphere	MDAIAAKLERLKREAQREWKRKWSEKLRQATPSNAAEWRALGRAVMGALLKVAVIIALPFAVLVRGAVFIYQHGQTSVWFALL
Ga0075425_1007035402	3300006854	Populus Rhizosphere	MESVAVRFARLKREAQKEWKRKWRKKVRQAAPASAAEWRALAAALAGAVLKIAMIIALPFAVLVRGSVFFYEHGTTSVWLAL
Ga0075426_109992122	3300006903	Populus Rhizosphere	MDAVADRLARLKREAHKEWKQKWRKKLRQAAPTNAAEWRALGVAALAAVLKIALIIALPFAVLVRGSV
Ga0075424_1007064241	3300006904	Populus Rhizosphere	MDAIAAKLERLKREAQREWKRKWSEKLRQATPSNAAEWRALAGVVLSTLLKIALIIALPFAVLVRGSVFIYQHG
Ga0075436_1007490492	3300006914	Populus Rhizosphere	MESVAVRFARLKREAQKEWKRKWRKKVRRAAPASAAEWRALGVEVLRAIVKIALIIALPFAVLVRGSVFFYEHGTTSVWLAL
Ga0075436_1009101022	3300006914	Populus Rhizosphere	MDAPVAVRLAKLKREAEKEWRKKWRQKLRKAAPSNAAEWRALAGAALGAFVKIVLVIALPFLVLVRGSVFF
Ga0099791_106680111	3300007255	Vadose Zone Soil	MDGVAVRLARLKREAQKEWKRKWRKKIRQAAPANAAEWRALAAEALGAVLKVVLIIALPFAVLVRGSVF
Ga0099793_106356901	3300007258	Vadose Zone Soil	MDGIAVKLERLKREVRKEWKAKWRKKLRQAAPSNAAEWRALAAEAAGAVLKVVLIIALPFAVLVRG
Ga0099794_106889821	3300007265	Vadose Zone Soil	MDGIAVKLERLKREVRKEWKAKWRKKLRQAAPSNAAEWRALAAEALGAVLKVVLIIALPFAVLVRGSV
Ga0066710_1026373962	3300009012	Grasslands Soil	MDGIAVKLERLKREAQKEWKRKWRQKLRQAAPSTPAEWRALAGEVLRGSLKIALITALPFAVLVRGAVFIY
Ga0099827_106422712	3300009090	Vadose Zone Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPANAAEWRALAGAILGGVLKVALIIALPFAVLVRGSVF
Ga0105245_131264292	3300009098	Miscanthus Rhizosphere	MDGIAVKLERLKREARKEWKRKWRATTKATPAEWRALAGDIALGFLKVALIIALPFGVLVRGSVFIYEHGETPVWVAVLTAAFLTGAVITAY
Ga0075423_101739971	3300009162	Populus Rhizosphere	MDGIAVKLERLKREVRKEWKAKWRKKLRQATPSNAAEWRALAAEAAGAVLKVLVIIALPFAVLVRGSVFIYEHGTRSVWLAVATAGILT
Ga0134070_102561391	3300010301	Grasslands Soil	MDGVAVRLAKLKREAEKEWRKKWRQKLRKAAPANAAEWRALGGAAVGALLQVLLIIALPFLVLVRGSVFFYENGTRSVWLAMLTAGIL
Ga0134109_101915891	3300010320	Grasslands Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPANAAEWRALGVAILSGVLKLALIIALPFAVLVRGSVFFYEHGGTPV
Ga0134086_101101851	3300010323	Grasslands Soil	MDSVAVRLERLKREAQKEWRRKWRQKLRKAAPANAAEWRALAVEVLSAIAKIALIIALPFAVLVRGSVFIYEHGTRSVW
Ga0134121_103431081	3300010401	Terrestrial Soil	MDGIAIKLERLKREARKEWKRKWRATTKATPAEWRALAGDIALGFVKVALIIALPFGVLVRGSVFIYEHGETPVWV
Ga0137392_101138281	3300011269	Vadose Zone Soil	MDGIAVKLERLKREARREWKRKWRQKLRQAAPSTPAEWRALAGEALGAVLKIALIIALPFAVLVRGSVFIYEHGTRSVWLAVATAGILTGGVITAY
Ga0137388_100700461	3300012189	Vadose Zone Soil	MDGIAVKLERLKREAQKEWKRKWRKKIRQAAPANAAEWRALAAEALGAVLKVVLIIALPFAV
Ga0137382_104033861	3300012200	Vadose Zone Soil	MDAIAVKLERLKREAQREWKRKWRQKLRQATPSNAAEWRALAGVALSTLLKIALIIALPFAVLVRGSVFIYQHGETSVWLAL
Ga0137399_100712621	3300012203	Vadose Zone Soil	MDAVAVRLAKLKREAEKEWRKKWRQKLRKAAPANAAEWRALGGAAVGALLQVLLIIALPFLVLVRGSVFFYENGTRSVWLAMLTAGILTGGVITAYAV
Ga0137399_106074921	3300012203	Vadose Zone Soil	MDGIAVKLERLKREVRKEWKAKWRKKLRQAAPSNAAEWRALAAEAAGAVLKVVLIIALPFAVLVRGSVFIYEHGTRSVWLAVATAGILTG
Ga0137399_112163991	3300012203	Vadose Zone Soil	MDGIAVRLERLKREAQKEWKRKWRKKLRDAAPSSAAEWRALAAEALGAVLKVILTIALPFAV
Ga0137362_107676391	3300012205	Vadose Zone Soil	MDGIAVKLERLKREAQKEWKRKWRKKLRDAAPSSAAEWRALAAEAAGAVLKVVLIIALPFAVLVRG
Ga0137381_103217201	3300012207	Vadose Zone Soil	MDGIAVKLERLKREAAREWKRKWRQKLRQAAPATSAEWRALAGAVAAGLMKIFLIIALPFAVLVRGS
Ga0137381_106385012	3300012207	Vadose Zone Soil	MDGVAAKLERLKREVRKEWKAKWRKKLRQAAPANAAEWRALAAEAAGAVLKVVLIIALPFAVLVRGSVFIYEH
Ga0137381_106778792	3300012207	Vadose Zone Soil	MDGIAVKLERLKREVRKEWKAKWRKKLRQATPSNAAEWRALAAEAAGAVLKVVLIIALPFAVLVRGSVFIYEH
Ga0137376_102882293	3300012208	Vadose Zone Soil	MDGIAVKLERLKREAQKEWNRKWRKKVRQAAPANAAEWRALGVAILSGVLKLALIIALPF
Ga0137376_108867282	3300012208	Vadose Zone Soil	MDGVAAKLERLKREVRKEWKAKWRKKLRQAAPANAAEWRALAAEAAGAVLKVVLIIALPFAVLVRG
Ga0137378_104548591	3300012210	Vadose Zone Soil	MDGVAAKLERLKREVRKEWKAKWRKKLRQAAPANAAEWRALAAEAAGAVLKVVLIIALPFAVLV
Ga0137378_105494841	3300012210	Vadose Zone Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPASAAEWRALAGEVVRALLKIVLIIALPFAVLVRG
Ga0137370_104516043	3300012285	Vadose Zone Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPANAAEWRALGVAILSGVLKLALIIALPFAVLVRGSVFFYEHGGTPVWLS
Ga0137370_108996951	3300012285	Vadose Zone Soil	MDAIAVKLERLKREAQREWKRKWRQKLRQATPSNAAEWRALAGVALTTLLKIALIIALPFAVLVRGSVFIYQHGETS
Ga0137366_100855621	3300012354	Vadose Zone Soil	MDSVAVRLERLKREAQKEWRRKWRQKLRKAAPANAAEWRALAVEVLSAIAKIALIIALPFAVLVRGSVFIYEHGTRSVWL
Ga0137384_111502922	3300012357	Vadose Zone Soil	MQSDTYIFRMDGVAVRLARLKKEAQREWRRKWRQAAPSTTAEWKALAGEALIGFLKIALIIALPFVVLVRGSVFIYEHGRTPVWVAVLV
Ga0137384_111632281	3300012357	Vadose Zone Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPASAAEWRALAVEAHPALLKIALIIALPFALLVRGSVFFYEP
Ga0137385_104129471	3300012359	Vadose Zone Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPANAAEWRALAGAMLGAVLKVALIIALPFAVLVRGSVFFYEHGGTPVWLSVLTAAILTG
Ga0137360_101730781	3300012361	Vadose Zone Soil	MDGIAVKLERLKREAQKEWKRKWRKKLRDAAPSSAAEWRALAAEAAGAVLKVVLIIALPFAVLVRGSVFIYEHGTRSVW
Ga0137360_106099881	3300012361	Vadose Zone Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPASAAEWRALAGEVVRALLKIALIIALPFAVLVRGSV
Ga0137398_112321082	3300012683	Vadose Zone Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPANAAEWRALGGAILGGVLKLALIIALPF
Ga0137397_109046661	3300012685	Vadose Zone Soil	MKRKAARKWKRKRHQKLRQAAPANAAEWRALAGEVLRAMLKIALIIALPFAVLVRGAVFIYQHGQTSVWLAVLTSAF
Ga0137396_101888433	3300012918	Vadose Zone Soil	MDGIAVKLERLKREAAREWKRKWRQKLRQAAPANAAEWRALAGEVLRAMLKIALIIALPF
Ga0137394_100880875	3300012922	Vadose Zone Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPANAAEWRALGGAVLGAVLKLALIIALPFAVLVRGSVFFYEHGGTPVWLS
Ga0137394_102397903	3300012922	Vadose Zone Soil	MDGIAVKLERLKREAAREWKRKWRQKVRQAAPANAAEWRALAGEVLRAMLKIALIIALPFAVLVRGAVFIYQHGQTSVWLAVLTSAFLTAGVVTA
Ga0137394_116060701	3300012922	Vadose Zone Soil	MDGVTAKLERLKREVRKEWKAKWRKKLRQATPSNAAEWRALAAEAAGAVLKVVVIIALPFAVLVRGSVFIY
Ga0137419_108927492	3300012925	Vadose Zone Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPANAAEWRALGGAILGGVLKLALIIALPFAVLVRGSVFFYEHGGTPVWLSLL
Ga0137419_111180852	3300012925	Vadose Zone Soil	MDGIAVKLERLKREAAREWKRKWRQKLRQAAPANAAEWRALAGEVLRAVLKIALIIALPFAVLVRGAVFIYQHGQTSVWLAVLTSAFL
Ga0137419_111218481	3300012925	Vadose Zone Soil	MDGIAVKLERLKREAQKEWKRKWRKRIQQAAPATAAEWRALVAAALGAVLKVVLIIALPFAVLVRGSVFIYEHGTRSV
Ga0137419_117455751	3300012925	Vadose Zone Soil	MDGVAVRLAKLKREAEKEWRRKWRQKLRQAAPANAAEWRALAGEVLRAMLKIALIIALPFAVLVR
Ga0137416_116433321	3300012927	Vadose Zone Soil	MDGVAVRLARLKREAQKEWKRKWRKKLRQAAPSNAAEWRALAAEAAGAVLKVVLIIALPFAVLVRGSVFIYEHGTRSVW
Ga0126375_104625651	3300012948	Tropical Forest Soil	MDAIAVKLERLKREAQREWKRKWRQKLRQATPSNAAEWRALAGVVSSGLLKIALIIALPFAVLVRGA
Ga0134077_101410291	3300012972	Grasslands Soil	MDGIAVKLERLKREAQKEWKRKWRKKLRQAAPANAAEWRALAAEAAGAVLKVVLIIALP
Ga0134076_105333861	3300012976	Grasslands Soil	MDGVAAKLERLKREVRKEWKAKWRKKLRQAAPANAAEWRALAGEAAGAALKVVLIIALPFAVLVR
Ga0134075_100116707	3300014154	Grasslands Soil	MDGIAVKLERLKREARREWKRKWRQKLRKAAPANAAEWRALAGEVGIALLKIALIIALPFGVLVRGSVFIY
Ga0137412_102109993	3300015242	Vadose Zone Soil	MDGIAVKLERLKREVRKEWKAKWRKKLRQAAPSNAAEWRALAAEAAGAVLKVVVIIALPFAVLVRGSVFIYEHGTRSVWLAVNMLYRGF*
Ga0184610_10417392	3300017997	Groundwater Sediment	MDGIALKLDRLKREARREWQRKWRQRWRQKAPSTPAEWRALAGDALRALLRIALIIALPFAVLVRGAVFIHEHGRAP
Ga0184610_11751012	3300017997	Groundwater Sediment	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPANAAEWRALGGAIVGAVLKLALIIALPFAVLVRGSVFF
Ga0184634_100045385	3300018031	Groundwater Sediment	MDGIALKLARLKREARREWRRQWRQKAPATPAEWRALAGEAVRGLLKVAFIIALPFAVLVRGAVFIHEHGRAPVWVALLVAALLTAAVVTGYA
Ga0184640_100597742	3300018074	Groundwater Sediment	MDGIALKLARLKREARREWRRQWRQKAPATPAEWRALAGEAVRGLLKVAFIIALPFAVLVRGAVFIHEHGRAPVWVALLVAALLTAAVV
Ga0184609_105114682	3300018076	Groundwater Sediment	MDGIAVRLERLKREAKKEWKRKWRQKLRQAAPANSAEWRALAVAVMSGLLKIVLIIALPFGVLVRGSVFIYEHGETPVWVAVVTAAFLTSGVITVY
Ga0066669_112081602	3300018482	Grasslands Soil	MDAPVAVRLAKLKREAEKEWRKKWRQKLGKAAPSSAAEWRALGGAAIGAVLKIILIIALPFAVLVRGSVFFYENGGTPVWLAVLTAAILTGGVV
Ga0193723_10512292	3300019879	Soil	MDGIAVKLERLKREVRKEWKAKWRKKLRQATPSNAAEWRALAAEAAGAVLKVVVIIALPFAVL
Ga0193733_10725321	3300020022	Soil	MDGIAVKLERLKREAQKEWKRKWRKQIRQAAPSTAAEWRALAAEAAGAVLKVVLIIALPFTVLVRGSVFIYEHGTRSVWLAVATAAI
Ga0193719_100868434	3300021344	Soil	MDGIAVKLERLKREAQKEWKRKWRKKIRQAAPSTAAEWRALAAEAAGAVLTVVLIIALPFAVLV
Ga0207684_112862271	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDTVAVRLAKLKREAQKEWKRKWRKKLKDATPATSAEWRALAGDVGLAVLKVALIIALPFAVLVRGAVFIYEHGTRSVWLSVLTSAILTG
Ga0207701_112023392	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MDGIAIKLERLKREARKEWKRKWRATTKATPAEWRALAGDIALGFVKVALIIALPFGVLVRGSVFIYEHGETPVWVVVRTWSCWRALAVTGR
Ga0208141_10024551	3300025988	Rice Paddy Soil	MDGVAVRLEKLKREAQKEWKRTWRKKLKQAAPKTAAEWRALGAEAIGAVLKVALIIVLPFAVLVRGS
Ga0209438_11577322	3300026285	Grasslands Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPANAAEWRALGGAILGAVLKLALIIALPFAVLVRGSVFFYEHGGTPVWLSLL
Ga0209471_10758131	3300026318	Soil	MDGIAVKLARLKREAQKEWKRKWRKKIQQAAPSTAAEWRALGAEAVGAVLKVVLIIALPFAVL
Ga0209059_13259902	3300026527	Soil	MDGIAVKLARLKREAQKEWKRKWRKKIQQAAPSTAAEWRALGAEAVGAVLKVVLIIALPFAVLVRGSVFIYEHGTRSVWLAVATAGILT
Ga0209378_12212801	3300026528	Soil	MDGIAVKLERLKREAQKEWKRKWRQKLRQAAPSTPAEWRALAGEVLRGLLKIALIIALPFAVLVRGSVFIYEHGTRSVWLAVLTAGLLTGGVITAYA
Ga0209058_11123594	3300026536	Soil	MDSVAVRLERLKREAQKEWRRKWRQKLRKAAPANAAEWRALAVEVLSAIAKIALIIALPFAVLVRGSVFIYEHGTRSVWLGVLTAALL
Ga0209056_100639957	3300026538	Soil	MDSVAIRFARLKREAQREWKRKWRKKVRQAAPANAAEWRALVGAIAGAVMKVALIIALPFAVLVRGSVFFYEHGGTPVWLSVL
Ga0208454_10209461	3300027573	Soil	MDGIAVKLERLKREARKEWQRKWRKKLRDAAPSTRAEWRGLAGDVAIGFLKIVLITVLPFAVLVRGSVFIYEHGETPVWVAVLT
Ga0209588_10531271	3300027671	Vadose Zone Soil	MDGIAVKLERLKREAQREWKRKWRQKLRQAAPSTPAEWRALAGEVLRGLLKIALIIALPFAVLVRGS
Ga0209701_104160622	3300027862	Vadose Zone Soil	MDGIAVKLERLKREARREWKRKWRQKLRQAAPSTPAEWRALAGEALGAVLKIALIIALPFAVLVRG
Ga0209382_117933231	3300027909	Populus Rhizosphere	MDGVAVKLERLKREAQREWKRKWRQKLRQATPSSAAEWRALAGAVVGTVLKIIAIIALPFAVLVRGAVFIY
Ga0209853_11714032	3300027961	Groundwater Sand	MDGIALKLDRLKREARREWQRKWRQRWRQKAPSNPAEWRALAGDAVRGFLRVALIIALPFAVLVRGAVFIHEHG
Ga0247675_10386182	3300028072	Soil	MDGIAVKLERLKREARKEWKRKWRATTKATPAEWRALAGDIALGFLKVALIIALPFGVLVRGSVFIYEHGETPVWVAVLTAAFLTGAVIT
Ga0307278_100629244	3300028878	Soil	MDGIAVKLERLKREAQKEWKRKWRKKVRQAAPANAAEWRALGGAILAGVLKLALIIALPFAVLVRGSV
Ga0364924_070757_1_252	3300033811	Sediment	MDGIAVKLERLKREARREWRRKWRQKLRQAAPATSAEWRALAGEAAAGLLKVVLIIALPFAVLVRGSVFIYEHGKTPVWLAVLT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091685

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences