Metagenome Family F091678

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091678
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	51 residues
Representative Sequence	MTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK
Number of Associated Samples	83
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.34 %
% of genes near scaffold ends (potentially truncated)	57.94 %
% of genes from short scaffolds (< 2000 bps)	85.98 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.505 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.579 % of family members)
Environment Ontology (ENVO)	Unclassified (43.925 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.664 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 80.00% β-sheet: 0.00% Coil/Unstructured: 20.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00497	SBP_bac_3	4.67
PF13505	OMP_b-brl	3.74
PF01425	Amidase	2.80
PF12833	HTH_18	2.80
PF12625	Arabinose_bd	2.80
PF13191	AAA_16	0.93
PF13430	DUF4112	0.93
PF12900	Pyridox_ox_2	0.93
PF04392	ABC_sub_bind	0.93
PF01979	Amidohydro_1	0.93
PF06776	IalB	0.93
PF00753	Lactamase_B	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	2.80
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.93
COG5342	Invasion protein IalB, involved in pathogenesis	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.50 %
Unclassified	root	N/A	21.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.50 %
Unclassified	root	N/A	21.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.50 %
Unclassified	root	N/A	21.50 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	72.90 %
Unclassified	root	N/A	21.50 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	71.03 %
Unclassified	root	N/A	21.50 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	57.94 %
Unclassified	root	N/A	21.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.74 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	52.34 %
Unclassified	root	N/A	21.50 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5.61 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.87 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	52.34 %
Unclassified	root	N/A	21.50 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5.61 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	1.87 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	52.34 %
Unclassified	root	N/A	21.50 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5.61 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10016212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2046	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1062959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300000787\|JGI11643J11755_10857145	Not Available	586	Open in IMG/M
3300001867\|JGI12627J18819_10216382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300002245\|JGIcombinedJ26739_101287004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300002906\|JGI25614J43888_10016330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2385	Open in IMG/M
3300002914\|JGI25617J43924_10274552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300004463\|Ga0063356_101910735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	895	Open in IMG/M
3300004633\|Ga0066395_10380655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	791	Open in IMG/M
3300005163\|Ga0066823_10072571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300005166\|Ga0066674_10142115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1130	Open in IMG/M
3300005167\|Ga0066672_10527458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300005181\|Ga0066678_10660312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300005332\|Ga0066388_103528990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	798	Open in IMG/M
3300005332\|Ga0066388_104747798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300005332\|Ga0066388_105374427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300005332\|Ga0066388_106345000	Not Available	596	Open in IMG/M
3300005406\|Ga0070703_10426455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300005468\|Ga0070707_100284977	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300005468\|Ga0070707_102064590	Not Available	537	Open in IMG/M
3300005713\|Ga0066905_101880536	Not Available	553	Open in IMG/M
3300005764\|Ga0066903_102235602	Not Available	1055	Open in IMG/M
3300005764\|Ga0066903_104525392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300005764\|Ga0066903_105317588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300005764\|Ga0066903_107440063	Not Available	565	Open in IMG/M
3300005764\|Ga0066903_107922710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300005764\|Ga0066903_108178709	Not Available	535	Open in IMG/M
3300006797\|Ga0066659_10081715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2146	Open in IMG/M
3300006854\|Ga0075425_100380887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1625	Open in IMG/M
3300009143\|Ga0099792_10256631	Not Available	1020	Open in IMG/M
3300010047\|Ga0126382_10660049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	871	Open in IMG/M
3300010048\|Ga0126373_12357299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	592	Open in IMG/M
3300010376\|Ga0126381_103775749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300010376\|Ga0126381_104093699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	566	Open in IMG/M
3300010398\|Ga0126383_11523384	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300010398\|Ga0126383_11607335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	739	Open in IMG/M
3300011270\|Ga0137391_10027432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4754	Open in IMG/M
3300012201\|Ga0137365_10778772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	699	Open in IMG/M
3300012202\|Ga0137363_10121125	All Organisms → cellular organisms → Bacteria → Proteobacteria	2019	Open in IMG/M
3300012204\|Ga0137374_10009056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11768	Open in IMG/M
3300012361\|Ga0137360_11592523	Not Available	558	Open in IMG/M
3300012362\|Ga0137361_11770060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300012362\|Ga0137361_11840025	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300012683\|Ga0137398_10417650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300012971\|Ga0126369_11605415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	740	Open in IMG/M
3300016294\|Ga0182041_11842206	Not Available	561	Open in IMG/M
3300016319\|Ga0182033_12115061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300016341\|Ga0182035_10791175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	832	Open in IMG/M
3300016357\|Ga0182032_10982799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	720	Open in IMG/M
3300016422\|Ga0182039_11873588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300018433\|Ga0066667_11636924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300018468\|Ga0066662_11034435	Not Available	816	Open in IMG/M
3300018468\|Ga0066662_12673333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300021178\|Ga0210408_11259153	Not Available	563	Open in IMG/M
3300021372\|Ga0213877_10288315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300021560\|Ga0126371_12905196	Not Available	581	Open in IMG/M
3300025885\|Ga0207653_10015186	All Organisms → cellular organisms → Bacteria	2417	Open in IMG/M
3300025910\|Ga0207684_10091321	All Organisms → cellular organisms → Bacteria	2595	Open in IMG/M
3300025922\|Ga0207646_11720915	Not Available	538	Open in IMG/M
3300027050\|Ga0209325_1002320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1787	Open in IMG/M
3300027605\|Ga0209329_1016827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1448	Open in IMG/M
3300027874\|Ga0209465_10019773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3093	Open in IMG/M
3300027874\|Ga0209465_10022586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2909	Open in IMG/M
3300031543\|Ga0318516_10058430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2115	Open in IMG/M
3300031545\|Ga0318541_10061318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1953	Open in IMG/M
3300031545\|Ga0318541_10232809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1022	Open in IMG/M
3300031561\|Ga0318528_10611913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300031572\|Ga0318515_10312499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	842	Open in IMG/M
3300031573\|Ga0310915_10041485	All Organisms → cellular organisms → Bacteria → Proteobacteria	2932	Open in IMG/M
3300031573\|Ga0310915_10105589	Not Available	1908	Open in IMG/M
3300031640\|Ga0318555_10374654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771	Open in IMG/M
3300031679\|Ga0318561_10767987	Not Available	529	Open in IMG/M
3300031724\|Ga0318500_10439083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300031736\|Ga0318501_10550415	Not Available	631	Open in IMG/M
3300031744\|Ga0306918_10396749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1074	Open in IMG/M
3300031744\|Ga0306918_11397825	Not Available	536	Open in IMG/M
3300031747\|Ga0318502_10503820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	725	Open in IMG/M
3300031751\|Ga0318494_10875304	Not Available	527	Open in IMG/M
3300031763\|Ga0318537_10155962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	850	Open in IMG/M
3300031763\|Ga0318537_10163377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300031764\|Ga0318535_10268809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	763	Open in IMG/M
3300031779\|Ga0318566_10018006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3086	Open in IMG/M
3300031782\|Ga0318552_10317593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	792	Open in IMG/M
3300031782\|Ga0318552_10514164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300031796\|Ga0318576_10495748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	576	Open in IMG/M
3300031799\|Ga0318565_10293245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	790	Open in IMG/M
3300031799\|Ga0318565_10577432	Not Available	541	Open in IMG/M
3300031832\|Ga0318499_10026785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2052	Open in IMG/M
3300031833\|Ga0310917_10639548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	721	Open in IMG/M
3300031835\|Ga0318517_10245195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300031890\|Ga0306925_10054603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4171	Open in IMG/M
3300031890\|Ga0306925_12282350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300031893\|Ga0318536_10445854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300031893\|Ga0318536_10632044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300031896\|Ga0318551_10859256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300031942\|Ga0310916_11476400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300031981\|Ga0318531_10311396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300031981\|Ga0318531_10431672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300032010\|Ga0318569_10130836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1147	Open in IMG/M
3300032044\|Ga0318558_10462710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300032051\|Ga0318532_10176828	Not Available	758	Open in IMG/M
3300032055\|Ga0318575_10496638	Not Available	619	Open in IMG/M
3300032174\|Ga0307470_11116150	Not Available	635	Open in IMG/M
3300032180\|Ga0307471_100402067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1497	Open in IMG/M
3300032261\|Ga0306920_100641201	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300032261\|Ga0306920_104254915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300033289\|Ga0310914_11651405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.13%
Host-Associated	Host-Associated	1.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.13%
Plants	Host-Associated → Plants	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.70%
Loam	Environmental → Terrestrial → Soil → Loam	22.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100162123	3300000597	Forest Soil	GGDAMTTKEAFEIVLALAFDNMADEDEMPEIYRQQSEALEIVTEIAQYYGSRR*
AF_2010_repII_A100DRAFT_10629592	3300000655	Forest Soil	RALDPLGGDAMTTKEAFEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAQYYGSRR*
JGI11643J11755_108571453	3300000787	Soil	SFGTPFRSRCTIGRCSVMTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK*
JGI12627J18819_102163823	3300001867	Forest Soil	MTTKEAFDIVLALAFDNMVDEKKMPEMYKQQSEALEIIAEIAKYYG
JGIcombinedJ26739_1012870041	3300002245	Forest Soil	MTTKEAFDIVLALAFDNMVDEKKMPEMYKQQSEALEIIAEIAKY
JGI25614J43888_100163302	3300002906	Grasslands Soil	MTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK*
JGI25617J43924_102745521	3300002914	Grasslands Soil	MTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK
Ga0063356_1019107353	3300004463	Arabidopsis Thaliana Rhizosphere	MTTKEAFDIVLALAFDNMVDEKEIPEMYKRQSEALEIIAEIAKYYGSRRK*
Ga0066395_103806553	3300004633	Tropical Forest Soil	MTTKEAFDIVLALAFANMVDEKKMPEMYKQQSEALEIIAEIAKYYGSRRT*
Ga0066823_100725712	3300005163	Soil	MTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRGK*
Ga0066674_101421153	3300005166	Soil	MTTKEAFDIVLALAFGNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK*
Ga0066672_105274582	3300005167	Soil	MTTKEAFDIVLALAFDNMVGEKEMPEMYKQQSEALEIIAEIAKYYGSRRK*
Ga0066678_106603121	3300005181	Soil	MTTKEAFDIVLALAFDNMVDEKEMPEMYKRQSEALEIIAEIAKYYGSRRK*
Ga0066388_1035289902	3300005332	Tropical Forest Soil	MTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIVAEIAKYYGSRRK*
Ga0066388_1047477982	3300005332	Tropical Forest Soil	MTTKEAFDIVLALAFDNMVDQKEMPEMYKQQSEALEIIAEIAKYYGSRRK*
Ga0066388_1053744274	3300005332	Tropical Forest Soil	MTTKEAFDTVMALAFDNMADEKEMPEMYKRQSEALEIIAEIAKYYGSRRK*
Ga0066388_1063450001	3300005332	Tropical Forest Soil	MTTKEAFDIVLSLAFDNMVDEEEMPEIYKQQSEALEIIAEIAKYYGSRRE*
Ga0070703_104264553	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRQ*
Ga0070707_1002849772	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKEAFDIVLALAFDNMVDEKEMPEMYKRQSEALEIIAEIAKYYGSRRQ*
Ga0070707_1020645903	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	IGRCSVMTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK*
Ga0066905_1018805361	3300005713	Tropical Forest Soil	IVLALAFDNMVDEEEMPEIYKQQSEALEIVAEIARYYGSRRK*
Ga0066903_1022356021	3300005764	Tropical Forest Soil	MTTKEAFDIVLSLAFDNIVDEEEMPEIYKQQSEALEIIAEIAKYYGSRRE*
Ga0066903_1045253921	3300005764	Tropical Forest Soil	RLPRALDPLGGDAMTTKEAFEIVLALAFDNMVDEDEMPEIYKQQSEALEIVREIAQYYGSRR*
Ga0066903_1053175882	3300005764	Tropical Forest Soil	PLGGDAMTTKEAFEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAQYYGSRR*
Ga0066903_1074400631	3300005764	Tropical Forest Soil	MTTKEAFEIVLALAFDNMADEDEMPEIYKQQSEALEIVREIAQYYGSRR*
Ga0066903_1079227102	3300005764	Tropical Forest Soil	MTTKEAFDIVLALAFDNMVDQKEMPEMYKQQSEALEIIAEIAKYYGS
Ga0066903_1081787092	3300005764	Tropical Forest Soil	MTTKEAFDIVLALAFANMADEDEMPEIYKQQSEALEIVTEIAKYYGSRR*
Ga0066659_100817152	3300006797	Soil	MTSKEAFDIVLSLAFGNMVDEKEMPEMYKRQSEALEIIAEIAKYYGSRRK*
Ga0075425_1003808873	3300006854	Populus Rhizosphere	VMTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK*
Ga0099792_102566313	3300009143	Vadose Zone Soil	TKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK*
Ga0126382_106600493	3300010047	Tropical Forest Soil	MTTKEAFDIVLALAFDNMVDEKKMPEMYKQQSEALEIIAEIAKYYGSRRK*
Ga0126373_123572992	3300010048	Tropical Forest Soil	AMTTKEAFEIVLALAFDNMVDEDEMPEMYKQQSEALEIVTEIAQYYGSRR*
Ga0126381_1037757491	3300010376	Tropical Forest Soil	LPRALDPSGGGAMTTKEAFEIVLALAFDNMVDEKEMPKIYKQQSEALEIVTEIAKYYGSRR*
Ga0126381_1040936991	3300010376	Tropical Forest Soil	LPRALDPLGGDAMTTKEAFEIVLALAFDNMVDEDEMPEMYKQQSEALEIVTEIAQYYGSRR*
Ga0126383_115233841	3300010398	Tropical Forest Soil	GVMTTKEAFDTVMALAFDNMADEKEMPEMYKRQSEALEIIAEIAKYYGSRRK*
Ga0126383_116073352	3300010398	Tropical Forest Soil	PRALDPLGGDAMTTKEAFEIVLALAFDNLVDEDEMPEIYKQQSEALEIVTEIAQYYGSRR
Ga0137391_100274321	3300011270	Vadose Zone Soil	RSRCTIGRCGVMTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK*
Ga0137365_107787721	3300012201	Vadose Zone Soil	MTTKEAFDIVLALAFDNRADEKEMPEIYKQQSEALEIVAEIVKYYGS
Ga0137363_101211254	3300012202	Vadose Zone Soil	MTTKEAFDIVLALAFDNMVDEKEMPETYKQQSEALEIVAEIAKYYGSKRK*
Ga0137374_1000905616	3300012204	Vadose Zone Soil	MTTKEAFDIVLALAFDNRADEKEMPEIYKQQSEALEIVAEIVKYYGSRRK*
Ga0137360_115925231	3300012361	Vadose Zone Soil	MTTKEAFDIMLALAFDNMVDEKEMPEMYKRQSEALEIIAEIAKYYGSRRK*
Ga0137361_117700602	3300012362	Vadose Zone Soil	MTTKEAFDIVLALAFDNMVGEKEMPEMYKQQSEALEIIAEIAKYYGS
Ga0137361_118400251	3300012362	Vadose Zone Soil	MTTKEAFDIVLALAFDNMVDEKETPETYKQQSEALEIVAEIAKYYGSRRK*
Ga0137398_104176502	3300012683	Vadose Zone Soil	MTTKEAFDIMLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK*
Ga0126369_116054152	3300012971	Tropical Forest Soil	LDPLGGDAMTTKEAFEIVLALAFDNMVDEDEMPEMYKQQSEALEIVTEIAQYYGSRR*
Ga0182041_118422061	3300016294	Soil	RCTIGRCGVMTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK
Ga0182033_121150612	3300016319	Soil	EIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAQYYGSRR
Ga0182035_107911751	3300016341	Soil	TKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK
Ga0182032_109827991	3300016357	Soil	PRALDPLGGDAMTTKEAFEIVLALAFDHMVDEDEMPEIYKQQSEALEIVTEIAQYYGSRR
Ga0182039_118735882	3300016422	Soil	MTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRE
Ga0066667_116369242	3300018433	Grasslands Soil	MTTKEAFDIVLALAFGNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK
Ga0066662_110344353	3300018468	Grasslands Soil	SRSSGTPFRSRCTIGRCGVMTTKEAFDIVLALAFGNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK
Ga0066662_126733332	3300018468	Grasslands Soil	MTTKEAFDIVLALAFDNMVGEKEMPEMYKQQSEALEIIAEIAKYYGSRRK
Ga0210408_112591532	3300021178	Soil	MTTKEAFDIVLALAFDNMVDEKKMPEMYKQQSEALEIIAEIAKYYGSRRN
Ga0213877_102883153	3300021372	Bulk Soil	MTTKEAFDIVLALAIDNMVDEKEMPEMYKRQSEALEIIAEIAKYYG
Ga0126371_129051961	3300021560	Tropical Forest Soil	MTTKEAFDIVLSLAFDNIVDEEEMPEIYKQQSEALEIIAEIAKYYGSRRE
Ga0207653_100151863	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKEAFDIVLALAFDNMVDEKEMPEMYKRQSEALEIIAEIAKYYGSRRK
Ga0207684_100913213	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKEAFDIVLALAFDNMVDEKEMPEMYKRQSEALEIIAEIAKYYGSRRQ
Ga0207646_117209151	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RCGVMTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK
Ga0209325_10023202	3300027050	Forest Soil	MTTKEAFDIVLALAFDNMVDEKKMPEMYKQQSEALEIIAEIAKYYGSRRS
Ga0209329_10168272	3300027605	Forest Soil	MTTKEAFDIVLALAFDNMVDEKKMPEMYKQQSEALEIIAEIAKYYGSRRK
Ga0209465_100197731	3300027874	Tropical Forest Soil	MTTKEAFDIVLALAFANMVDEKKMPEMYKQQSEALEIIAE
Ga0209465_100225863	3300027874	Tropical Forest Soil	MTTKEAFEIVLALAFDNMVDEDEMPEMYKQQSEALEIVTEIAQYYGSRR
Ga0318516_100584303	3300031543	Soil	MTTKEAFDIVLALAFDNMVDEEDMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318541_100613183	3300031545	Soil	MTTKEAFDIVLALATDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSKRK
Ga0318541_102328091	3300031545	Soil	MTTKEAFEIVLALAFDNMADENEMPEIYKQQSEALEIVT
Ga0318528_106119132	3300031561	Soil	MTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRR
Ga0318515_103124992	3300031572	Soil	FEIVLALAFDNMADEDEMPEIYKQQSEALEIVAEIAQYYGSRRR
Ga0310915_100414851	3300031573	Soil	MTTKEAFEIVLALAFDNMADENEMPEIYKQQSEALEIVTEIAQYYGSRR
Ga0310915_101055892	3300031573	Soil	MTTKEAFDIVLSLAFDNMVDEEEMPEIYKQQSEALEIIAEIAKYYGSRRE
Ga0318555_103746542	3300031640	Soil	FEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318561_107679871	3300031679	Soil	ALDPLGGDAMTTKEAFEIVLALAFDHMVDEDEMPEIYKQQSEALEIVTEIAQYYGSRR
Ga0318500_104390832	3300031724	Soil	MTTKEAFDIVLALATDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSK
Ga0318501_105504151	3300031736	Soil	PSGGGAMTTKEAFEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0306918_103967491	3300031744	Soil	GTPFRSRCTIGRCGVMTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK
Ga0306918_113978251	3300031744	Soil	MTTKEAFDIVLALAFDNMVDEEDMPEIYKQQSEALEIVTEIAKYYGSR
Ga0318502_105038202	3300031747	Soil	KEAFEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318494_108753042	3300031751	Soil	MTTKEAFDIVLALATDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK
Ga0318537_101559622	3300031763	Soil	TKEAFEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318537_101633771	3300031763	Soil	LGGGAMTTKEAFDIVLALAFDNMVDEEDMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318535_102688092	3300031764	Soil	MTTKEAFEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318566_100180061	3300031779	Soil	DIVLALAFDNMVDEEDMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318552_103175932	3300031782	Soil	LGGGAMTTKEAFEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318552_105141642	3300031782	Soil	MTTKEAFEIVLALAFDNLVDEDEMPEIYKQQSEALEIVTEIAQYYGSRR
Ga0318576_104957482	3300031796	Soil	MTTKEALEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAQYYGSRR
Ga0318565_102932452	3300031799	Soil	GAMTTKEAFDIVLALAFDNMVDEEDMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318565_105774321	3300031799	Soil	LYPSGGGAMTTKEAFEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318499_100267851	3300031832	Soil	VAFDIVLALAFDNMVDEEDMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0310917_106395481	3300031833	Soil	ALYPSGGGAMTTKEAFEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318517_102451951	3300031835	Soil	PRALDPLGGDAMTTKEAFEIVLALAFDNMADENEMPEIYKQQSEALEIVTEIAQYYGSRR
Ga0306925_100546033	3300031890	Soil	MTTKEAFDIVLALAFDNMADEKEMPEMYKRQSEALEIIAEIAKYYGSRRK
Ga0306925_122823501	3300031890	Soil	MTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAK
Ga0318536_104458541	3300031893	Soil	RALDPLGGDAMTTKEAFEIVLALAFDHMVDEDEMPEIYKQQSEALEIVTEIAQYYGSRR
Ga0318536_106320442	3300031893	Soil	TTKEALEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAQYYGSRR
Ga0318551_108592562	3300031896	Soil	GDAMTTKEALEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAQYYGSRR
Ga0310916_114764002	3300031942	Soil	MTTKEAFDIVLALAFDHMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRRK
Ga0318531_103113962	3300031981	Soil	LDPLGGGAMTTKEAFDIVLALAFDNMVDEEDMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318531_104316722	3300031981	Soil	IVLALAFDHMVDEDEMPEIYKQQSEALEIVTEIAQYYGSRR
Ga0318569_101308361	3300032010	Soil	YPSGGGAMTTKEAFEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318558_104627102	3300032044	Soil	AFDIVLALAFDNMVDEEDMPEIYKQQSEALEIVTEIAKYYGSRR
Ga0318532_101768281	3300032051	Soil	RSRCTIGRCGVMTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRR
Ga0318575_104966381	3300032055	Soil	MTTKEAFEIVLALAFDNMADENEMPEIYKQQSEALEIVTEIAQYYGS
Ga0307470_111161502	3300032174	Hardwood Forest Soil	TKEAFDIVLALAFDNMVGEKEMPEMYKQQSEALEIIAEIAKYYGSRRK
Ga0307471_1004020671	3300032180	Hardwood Forest Soil	MTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGSRHK
Ga0306920_1006412011	3300032261	Soil	YPLGGDAMTTKEAFEIVLALAFDNMADEDEMPEIYKQQSEALEIVTEIAQYYGSRR
Ga0306920_1042549152	3300032261	Soil	MTTKEAFDIVLALAFDNMVDEKEMPEMYKQQSEALEIIAEIAKYYGS
Ga0310914_116514052	3300033289	Soil	DAMTTKEAFEIVLALAFDNMADENEMPEIYKQQSEALEIVTEIAQYYGSRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091678

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences