Metagenome / Metatranscriptome Family F091669

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091669
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	101 residues
Representative Sequence	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGPDGKYKGSVFDYGRTQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSIDRAFNFNRR
Number of Associated Samples	69
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	51.40 %
% of genes near scaffold ends (potentially truncated)	48.60 %
% of genes from short scaffolds (< 2000 bps)	83.18 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.486 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.318 % of family members)
Environment Ontology (ENVO)	Unclassified (50.467 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.682 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 22.48% β-sheet: 27.91% Coil/Unstructured: 49.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00043	GST_C	4.67
PF13417	GST_N_3	2.80
PF13414	TPR_11	1.87
PF09650	PHA_gran_rgn	1.87
PF02798	GST_N	1.87
PF03401	TctC	0.93
PF11174	DUF2970	0.93
PF00239	Resolvase	0.93
PF04392	ABC_sub_bind	0.93
PF12071	DUF3551	0.93
PF13371	TPR_9	0.93
PF00816	Histone_HNS	0.93
PF00589	Phage_integrase	0.93
PF12833	HTH_18	0.93
PF02518	HATPase_c	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	4.67
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	4.67
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.93
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.93
COG2916	DNA-binding protein H-NS	Transcription [K]	0.93
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.93
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
All Organisms	root	All Organisms	35.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
cellular organisms	root	All Organisms → cellular organisms	34.58 %
Viruses	superkingdom	All Organisms → Viruses	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.97 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.17 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.21 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.35 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.35 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.54 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.35 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.61 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.35 %
Bradyrhizobium paxllaeri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium paxllaeri	2.80 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.87 %
Zavarzinella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.49 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.35 %
Bradyrhizobium paxllaeri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium paxllaeri	2.80 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1.87 %
Zavarzinella formosa	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104908674	Not Available	705	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10013547	Not Available	2244	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10021671	Not Available	1537	Open in IMG/M
3300004268\|Ga0066398_10180809	Not Available	546	Open in IMG/M
3300004633\|Ga0066395_10086948	Not Available	1477	Open in IMG/M
3300004633\|Ga0066395_10203958	Not Available	1036	Open in IMG/M
3300004633\|Ga0066395_10957902	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005332\|Ga0066388_100234769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2468	Open in IMG/M
3300005332\|Ga0066388_100886435	Not Available	1472	Open in IMG/M
3300005332\|Ga0066388_103210013	Not Available	835	Open in IMG/M
3300005332\|Ga0066388_104104137	Not Available	742	Open in IMG/M
3300005332\|Ga0066388_104391449	Not Available	718	Open in IMG/M
3300005332\|Ga0066388_108433770	Not Available	513	Open in IMG/M
3300005363\|Ga0008090_10180352	Not Available	1260	Open in IMG/M
3300005713\|Ga0066905_100517304	Not Available	995	Open in IMG/M
3300005713\|Ga0066905_101198394	Not Available	679	Open in IMG/M
3300005713\|Ga0066905_101256217	Not Available	664	Open in IMG/M
3300005713\|Ga0066905_101394641	Not Available	634	Open in IMG/M
3300005713\|Ga0066905_102092403	Not Available	526	Open in IMG/M
3300005764\|Ga0066903_100075535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4352	Open in IMG/M
3300005764\|Ga0066903_100304747	All Organisms → cellular organisms → Bacteria → Proteobacteria	2525	Open in IMG/M
3300005764\|Ga0066903_100798568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1687	Open in IMG/M
3300005764\|Ga0066903_102166094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1071	Open in IMG/M
3300005764\|Ga0066903_102710796	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300005764\|Ga0066903_103165839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	890	Open in IMG/M
3300005764\|Ga0066903_105134641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300005764\|Ga0066903_106553292	Not Available	606	Open in IMG/M
3300006797\|Ga0066659_10618089	Not Available	881	Open in IMG/M
3300009792\|Ga0126374_10063265	Not Available	1944	Open in IMG/M
3300010043\|Ga0126380_10212304	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	1306	Open in IMG/M
3300010046\|Ga0126384_10265631	All Organisms → Viruses → Predicted Viral	1394	Open in IMG/M
3300010046\|Ga0126384_11994606	Not Available	555	Open in IMG/M
3300010047\|Ga0126382_10217287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1374	Open in IMG/M
3300010048\|Ga0126373_10496953	Not Available	1262	Open in IMG/M
3300010358\|Ga0126370_10242747	Not Available	1391	Open in IMG/M
3300010358\|Ga0126370_10292122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1288	Open in IMG/M
3300010359\|Ga0126376_10247926	Not Available	1513	Open in IMG/M
3300010359\|Ga0126376_10487293	Not Available	1137	Open in IMG/M
3300010360\|Ga0126372_12491619	Not Available	568	Open in IMG/M
3300010362\|Ga0126377_10727893	Not Available	1046	Open in IMG/M
3300010362\|Ga0126377_11789904	Not Available	689	Open in IMG/M
3300010366\|Ga0126379_11651037	Not Available	746	Open in IMG/M
3300010366\|Ga0126379_13036797	Not Available	562	Open in IMG/M
3300010398\|Ga0126383_11425944	Not Available	782	Open in IMG/M
3300010398\|Ga0126383_12474072	Not Available	604	Open in IMG/M
3300012948\|Ga0126375_11950252	Not Available	517	Open in IMG/M
3300012971\|Ga0126369_10034275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4206	Open in IMG/M
3300012971\|Ga0126369_11250352	Not Available	832	Open in IMG/M
3300016294\|Ga0182041_10068942	All Organisms → cellular organisms → Bacteria	2478	Open in IMG/M
3300016294\|Ga0182041_10132115	Not Available	1895	Open in IMG/M
3300016294\|Ga0182041_10176775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium paxllaeri	1677	Open in IMG/M
3300016341\|Ga0182035_10430870	Not Available	1114	Open in IMG/M
3300016357\|Ga0182032_10183843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1577	Open in IMG/M
3300016371\|Ga0182034_10269006	Not Available	1353	Open in IMG/M
3300016387\|Ga0182040_10063342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium paxllaeri	2362	Open in IMG/M
3300016404\|Ga0182037_10010227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5396	Open in IMG/M
3300016422\|Ga0182039_10448527	Not Available	1105	Open in IMG/M
3300016445\|Ga0182038_10325094	Not Available	1266	Open in IMG/M
3300021560\|Ga0126371_10274450	All Organisms → cellular organisms → Bacteria → Proteobacteria	1807	Open in IMG/M
3300021560\|Ga0126371_10782139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1101	Open in IMG/M
3300021560\|Ga0126371_11895056	Not Available	716	Open in IMG/M
3300027874\|Ga0209465_10034618	Not Available	2387	Open in IMG/M
3300027874\|Ga0209465_10656728	Not Available	516	Open in IMG/M
3300031543\|Ga0318516_10052368	Not Available	2223	Open in IMG/M
3300031545\|Ga0318541_10013769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3718	Open in IMG/M
3300031545\|Ga0318541_10062053	Not Available	1942	Open in IMG/M
3300031545\|Ga0318541_10692255	Not Available	569	Open in IMG/M
3300031546\|Ga0318538_10215422	Not Available	1027	Open in IMG/M
3300031549\|Ga0318571_10065371	Not Available	1119	Open in IMG/M
3300031549\|Ga0318571_10323780	Not Available	585	Open in IMG/M
3300031561\|Ga0318528_10600636	Not Available	590	Open in IMG/M
3300031572\|Ga0318515_10071625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1781	Open in IMG/M
3300031573\|Ga0310915_10067673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium paxllaeri	2346	Open in IMG/M
3300031668\|Ga0318542_10060714	Not Available	1745	Open in IMG/M
3300031679\|Ga0318561_10322003	Not Available	847	Open in IMG/M
3300031680\|Ga0318574_10850631	Not Available	534	Open in IMG/M
3300031744\|Ga0306918_10002251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9807	Open in IMG/M
3300031744\|Ga0306918_10011402	All Organisms → cellular organisms → Bacteria → Proteobacteria	5055	Open in IMG/M
3300031747\|Ga0318502_10182134	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300031747\|Ga0318502_10348756	Not Available	876	Open in IMG/M
3300031748\|Ga0318492_10293778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	845	Open in IMG/M
3300031751\|Ga0318494_10376735	Not Available	822	Open in IMG/M
3300031768\|Ga0318509_10690461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	567	Open in IMG/M
3300031769\|Ga0318526_10166768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300031778\|Ga0318498_10248737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300031778\|Ga0318498_10401452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	609	Open in IMG/M
3300031781\|Ga0318547_10619366	Not Available	671	Open in IMG/M
3300031819\|Ga0318568_10521885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300031833\|Ga0310917_10927438	Not Available	585	Open in IMG/M
3300031845\|Ga0318511_10060100	Not Available	1547	Open in IMG/M
3300031846\|Ga0318512_10091118	Not Available	1422	Open in IMG/M
3300031880\|Ga0318544_10089490	Not Available	1153	Open in IMG/M
3300031912\|Ga0306921_10367390	Not Available	1681	Open in IMG/M
3300031942\|Ga0310916_10164821	All Organisms → cellular organisms → Bacteria	1837	Open in IMG/M
3300031947\|Ga0310909_10026043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4279	Open in IMG/M
3300031959\|Ga0318530_10434417	Not Available	545	Open in IMG/M
3300032008\|Ga0318562_10253936	Not Available	1021	Open in IMG/M
3300032035\|Ga0310911_10814609	Not Available	539	Open in IMG/M
3300032042\|Ga0318545_10050329	Not Available	1409	Open in IMG/M
3300032043\|Ga0318556_10032908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2424	Open in IMG/M
3300032052\|Ga0318506_10012002	Not Available	2935	Open in IMG/M
3300032052\|Ga0318506_10318946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300032054\|Ga0318570_10050112	Not Available	1730	Open in IMG/M
3300032091\|Ga0318577_10428341	Not Available	632	Open in IMG/M
3300032094\|Ga0318540_10112797	Not Available	1286	Open in IMG/M
3300033290\|Ga0318519_10023288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2813	Open in IMG/M
3300033290\|Ga0318519_10398488	Not Available	819	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.64%
Loam	Environmental → Terrestrial → Soil → Loam	23.36%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.87%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	23.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.87%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1049086742	3300000364	Soil	MKSIGNLILITLICVAAFIVFMAIRPVRAQQTPIYGPDGKYQGSVYDYGKTQTYTDRKGHFTGSAVNNGNGTTSFFNRNGDFTGSAGSSIDRAFNLKR*
AF_2010_repII_A1DRAFT_100135474	3300000597	Forest Soil	MSGRTIGNLILMTLICVVIFVVFMAMRPAPAGETPIYGPDGKYQGSVFDYGKTQTYTDRNGQFTGSAIKNGNGTTSFFGRNGSFTGSAGSSIDRAFNFNRR*
AF_2010_repII_A001DRAFT_100216711	3300000793	Forest Soil	ESDMSGRTIGNLILMTLICVVIFVVFMAMRPAPAGETPIYGPDGKYQGSVFDYGKTQTYTDRNGQFTGSAIKNGNGTTSFFGRNGSFTGSAGSSIDRAFNFNRR*
Ga0066398_101808092	3300004268	Tropical Forest Soil	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGPDGKYKGSVFDYGRTQTYTDRNGHFTGSAINNGNGTTSFFNRNGQFSGSAGLSIDRAFN
Ga0066395_100869482	3300004633	Tropical Forest Soil	MSGRTIGNLILMTLICVVIFVVFMAMRPAPAGETPIYGPDGKYQGSVFDYGKTQTYTDRNGRFTGSAVKNGNGTTSFFCRNGSFTGSAG
Ga0066395_102039581	3300004633	Tropical Forest Soil	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGPDGKYKGSVFDYGRTQPYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSVGSSIDRAFNFNRR
Ga0066395_109579022	3300004633	Tropical Forest Soil	IGYLILMVVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGKTQTYTDRNGKFVGSSVNNGNGTTSFYGQHGQFQGSAGSTVDRAFNFKRR*
Ga0066388_1002347694	3300005332	Tropical Forest Soil	MSGRTIGNLILMTLICVVIFVVFMALRPVRAGETPVYGPDGKYQGSLFDYGRTQTYTGRNGQFTGSAVKNGNGTTTSFFGRNGSFTGSAGSSIDRAFNFNRRCYVRRGGDRVTLGALLAVSG*
Ga0066388_1008864353	3300005332	Tropical Forest Soil	MNGSTIGNLILMTLICVVIFWVFMAFRPARAGETPIYGPDGKYQGSVFDYGRAQTYTDRNGHFVGSSVNNGNGTTSFFNRNGQFSGSAGSSIDRAFNFKRGR*
Ga0066388_1032100132	3300005332	Tropical Forest Soil	MVVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKHQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSFYGPRGNFTGSAGSSIDRAFNFKK*
Ga0066388_1041041371	3300005332	Tropical Forest Soil	MSDMNGTTIGNLILMTLICVVIFWVFMAFRPARAGETPIYGPDGKYQGSVFDYGRTQTYTDRNGHFVGSSVNNGNGTTSFFNRNGQFSGSAGSSIDRAFNFGRGR*
Ga0066388_1043914491	3300005332	Tropical Forest Soil	MNGSTIGNLILVTLVCVVIFVVFMALRPAPGGETPVYGPDGKYQGSVHDYGRMQTYTDRNGHFVGSSVNNGNGTTSFFNRNGQFSGSAGSSIDRAFNFNRR*
Ga0066388_1084337701	3300005332	Tropical Forest Soil	TIGNLILMTLICVVIFWVFMAFRPARAGETPIYGPDGKYQGAVFDYGRTQTYADRNGHFVGSSVNNGNGTTSFFNRNGSFAGSAGWSIDRAFNFGRSR*
Ga0008090_101803521	3300005363	Tropical Rainforest Soil	MSGRTIGNLILMTLICVGIFVVFMAMRPAPAGETPIYGPDGKYQGSVFDYGKTQTYTDRNGQFTGSAIKNGNGTTSFFGRNGSFTGSAGSSIDRAFNFNRR*
Ga0066905_1005173043	3300005713	Tropical Forest Soil	MNGKTIGNLTLMTLICVVIFWVFMAFRPARAGETPIYGPDGKYQGSVDYGRTQTYTDRNGHFVGSSVNNGNGTTSFFNRNGQFSGSAGLSIDRAFNFKRGR*
Ga0066905_1011983941	3300005713	Tropical Forest Soil	MKSIGYLILMVVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSFYGPRG
Ga0066905_1012562171	3300005713	Tropical Forest Soil	MVVLCVMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGKTQTYTDRNGKFVGSSVNNGNGTTSFYGQHGQFQGSAGS
Ga0066905_1013946411	3300005713	Tropical Forest Soil	MTQQWEREMHGRVIGNLILITLVCVIVFIVFMAIRPVRADETPIYGPDGKYQGSVFDYGRTQTYTDRNGRFTGSAIHNGNGTTSYYGPRGQYQGSSGSSIDRAF
Ga0066905_1020924032	3300005713	Tropical Forest Soil	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGPDGKYKGSVFDYGRTQTYTDRNGHFTGSAINNGNGTTSFFNRSGNFTGSAGSSIDRAFNFNRR*
Ga0066903_1000755352	3300005764	Tropical Forest Soil	MVVLCIMVFFVFMAMRPAPAMAQQTPIYGPYGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGSGITSFYGPRGNFQGSTGSSFDRAFNFKK*
Ga0066903_1003047474	3300005764	Tropical Forest Soil	MKSIGYLILMVVLCIMVFFVFMAMRPAPALAQQTPIYGPDGKYQGSVFNYGKTQTYTDRNGHFSGSAINNGNGTASFYGPRGNFTGSAGSSIDRAFNFKK*
Ga0066903_1007985681	3300005764	Tropical Forest Soil	MIERGRSPTVKDGVSDMNGSTIGNLILMTLICVVIFWVFMAFRPPRAGETPIYGLDGKYQGSVFDYGRTQTYTDRNGHFVGSSVNNGNGTTSFFNRNGQFSGSAGSSIDRAFNFGRGR*
Ga0066903_1021660942	3300005764	Tropical Forest Soil	MKSIGYLILMVVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGSGTTSFYGPRGNFQGSAGSSFDRAFNFRK*
Ga0066903_1027107961	3300005764	Tropical Forest Soil	MKSFGYLILMVVLCVMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGKTQTYTDRNGKFVGSSVNNGNGTTSFYGQHGQFQGSAGSTVDRAFNFKRR*
Ga0066903_1031658392	3300005764	Tropical Forest Soil	MKSIGYLILMVVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRDGHFSGSAINNGNGTTSFYGPRGNFQGSTGSSFDRAFNFKK*
Ga0066903_1051346413	3300005764	Tropical Forest Soil	MNGSTIGNLILVTLVCVVIFVVFMALRPAPGGETPVYGPDGKYQGSVHDYGRMQTYTDRNGHFVGSSVNNGNGTTSFFNRNG
Ga0066903_1065532922	3300005764	Tropical Forest Soil	ESDMSGRTIGNLILMTLVCVIIFITFMAIRPAPAGETPIYGPDGKYQGSVFDYGKTQTYTDRSGHFTGSAINQGNGTTSFYGPNGHFTGSVGSSIDRAFNFKGGRR*
Ga0066659_106180891	3300006797	Soil	MKSIGNLILMALVCVAVFIVFMAIRPVRAEQTPIYGPDGKYHGSVFNYGRTLTYTNRNGHFSGSAINNGNGTTSFYGPRGNFTGSAGSSIDRAFNFKILRSDF*
Ga0126374_100632652	3300009792	Tropical Forest Soil	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGPDGKYKGSVFDYGRTQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSVGSSIDRAFNFNRR*
Ga0126380_102123043	3300010043	Tropical Forest Soil	MVVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSFYGPRGNFTGGAGSSFDRAFNFRK*
Ga0126384_102656313	3300010046	Tropical Forest Soil	MNGRTIGNLILMTLICVVIFVVFMAMRPAPAGETPIYGPDGKYQGSVFDYGKTQTYTDRNGQFTGSAIKNGNGTTSFFGRNGSFTGSAGSSIDRAFNFNRR*
Ga0126384_119946062	3300010046	Tropical Forest Soil	MKSIGYLILMAVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSSINNGNGTMSFYGPRGNFTGSAGSSINRAFNFNKR*
Ga0126382_102172871	3300010047	Tropical Forest Soil	MSGRTIGNLILMTLVCVAIFVVFMAMRPAPAGETPIYGPDGKYKGSVFDYGRTQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSIDRAFNFNRR*
Ga0126373_104969531	3300010048	Tropical Forest Soil	SGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGPDGKYKGSVFDYGRTQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSIDRAFNFNRR*
Ga0126370_102427472	3300010358	Tropical Forest Soil	MNSSTIGNLILMTLICVVIFWVFMAFRPARAGETPIYGPDGKYQGSVFDYGRAQTYTDRNGHFVGSSVNNGNGTTSFFNRNGQFSGSAGLSIDRAFNFKRER*
Ga0126370_102921223	3300010358	Tropical Forest Soil	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGPDGKYKGSVFDYGRTQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSIDRAFNFNRR*
Ga0126376_102479263	3300010359	Tropical Forest Soil	MVFFVFMAMRPAPAMAQQTPIYGRDGKYQGSVFNYGKTQTYTDRNGKFVGSSVNNGNGTTSFYGQHGQFQGSAGSTVDRAFNFKRR*
Ga0126376_104872932	3300010359	Tropical Forest Soil	VIFVVFMAMRPAPAGETPIYGPDGKYKGSVFDYGRTQPYTDRNGHFTGSAINNGNGTTSFFNRSGNFTGSAGSSIDRAFNFNRR*
Ga0126372_124916191	3300010360	Tropical Forest Soil	MAVLCIMVFFVFMAMRPAPAMAQQTPIYAPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSFYGPRGNFTGGAGSSFDRAFNFKKCAS*
Ga0126377_107278931	3300010362	Tropical Forest Soil	MKSFGYLILMVVLCVMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGKTQTYTDRNGHFVGSSVNNGNGTTSFYGPRGNFNGTAGSSIDRAFNFNKR*
Ga0126377_117899042	3300010362	Tropical Forest Soil	MAVLCIMVFFVFMAMRPAPAMAQQTPIYAPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSFYGPRGNFQGSAGSSFDRAFNFRK*
Ga0126379_116510371	3300010366	Tropical Forest Soil	MKSIVYLILMVVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGSGITSFYGPRGNFQGSTGSSFDRAFNFKK*
Ga0126379_130367971	3300010366	Tropical Forest Soil	MSGRTIGNLILMTLICVVIFVVFMALRPVRAGETPVYGPDGKYQGSVFDYGRTQTYTDRNGQFTGSAIKNGNGTTSFFGRNGSFTGSAGSSIDRAFNFNRR*
Ga0126383_114259442	3300010398	Tropical Forest Soil	MKSIGYLILMVVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSFYGPRGNFTGSAGSSIDRAFNFKKKRAGGDEQMFGAE*
Ga0126383_124740721	3300010398	Tropical Forest Soil	NGKTIGNLILMTLVCVVIFIVFMAMRPARAGERPIYGPDGKYQGSVFNYGKTQTYTDRNGHFVGSSINNGNGTTSFYGPRGNFAGSAGSSIDRAFNFGRGR*
Ga0126375_119502522	3300012948	Tropical Forest Soil	MVVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSFYGPRGNFTGGAGSSFDRAFNFKK*
Ga0126369_100342752	3300012971	Tropical Forest Soil	MNSSTIGNLILMTLICVVIFWVFMAFRPARAGETPIYGPDGKYQGSVFDYGRTQTYTDRNGHFVGSSVNNGNGTTSFFNRNGQFSGSAGSSIDRAFNFKRGR*
Ga0126369_112503522	3300012971	Tropical Forest Soil	MSGRTIGNLILMTLVCVIIFITFMAIRPAPAGETPIYGPDGKYQGSVFDYGKTQTYTDRSGHFTGSAINQGNGTTSFYGPNGHFTGSVGSSIDRAFNFKGGRR*
Ga0182041_100689423	3300016294	Soil	VSGRTVGNLILVTLICVVIFWVFMALRPARAGETPVYGLDGKYQGSVFDYGRTQTYTDRNGQFNGSAVNNGNGTTSFFNRNGTFSGSAGSSIDRAFNFNRRVGP
Ga0182041_101321152	3300016294	Soil	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGSDGKYKGSVFDYGRAQTYTDRNGHFTGSAINNGNGTTSFFNRSGNFTGSAGSSIDRAFNFNRR
Ga0182041_101767751	3300016294	Soil	MKSIGYLILMGVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSYYGRNGNFSGSSIDRAFNFNRR
Ga0182035_104308703	3300016341	Soil	ERQCWRCRGVGAFRTNLLGEQTMKSIGYLILMGVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSYYRRNGNFSGSSIDRAFNFNRR
Ga0182032_101838431	3300016357	Soil	MKSIGYLILMGVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFGGSAINNGNGTTSYYRRNGNFSGSSIDRAFNFNRR
Ga0182034_102690062	3300016371	Soil	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGSDGKYKGPVFDYGRAQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSIDRAFNFNRR
Ga0182040_100633422	3300016387	Soil	MKSIGYLILMVVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSYYRRNGNFSGSSIDRAFNFNRR
Ga0182037_100102272	3300016404	Soil	MKSIGNLILMVLICVAVFIVFMAIRPVRAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSYYRRNGNFSGSSIDRAFNFNRR
Ga0182039_104485272	3300016422	Soil	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGSDGKYKGSVFDYGRAQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSID
Ga0182038_103250941	3300016445	Soil	MKSIGNLILMVLICVAVFIVFMAIRPVRAQQTPIYGPDGKYQGSVFYYGRTQTYTDRNGYFSGSAVNNGNGTTSFYGRNGNFTGSAGSSIDRAFNFGRSR
Ga0126371_102744502	3300021560	Tropical Forest Soil	VDRVRREGDRESDMSGRTIGNLILMTLVCVIIFITFMAIRPAPAGETPIYGPDGKYQGSVFDYGKTQTYTDRSGHFTGSAINQGNGTTSFYGPNGHFTGSVGSSIDRAFNFKGGRR
Ga0126371_107821392	3300021560	Tropical Forest Soil	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGPDGKYKGSVFDYGRTQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSVGSSIDRAFNFNRR
Ga0126371_118950561	3300021560	Tropical Forest Soil	MNGRTIGNLILMTLICVVIFVVFMALRPVRAGETPVYGPDGKYQGSVFDYGRTQTYTDRNGQFTGSAIKNGNGTTSFFGRNGSFTGSAGSSIDRVFNFNRR
Ga0209465_100346182	3300027874	Tropical Forest Soil	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGPDGKYKGSVFDYGRTQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSIDRAFNFNRR
Ga0209465_106567282	3300027874	Tropical Forest Soil	IGYLILMVVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGKTQTYTDRNGKFVGSSVNNGNGTTSFYGQHGQFQGSAGSTVDRAFNFKRR
Ga0318516_100523682	3300031543	Soil	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGSDGKYKGSVFDYGRAQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSIDRAFNFNRR
Ga0318541_100137691	3300031545	Soil	MSGRRLGNLILMTLTCVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTMTFYGRSGQITGSAGSSIDRAFNFNRTGRR
Ga0318541_100620532	3300031545	Soil	MSGRTVGNLILVTLICVVIFWVFMALRPARAGETPVYGLDGKYQGSVFDYGRTQTYTDRNGQFNGSAVNNGNGTTSFFNRNGTFSGSAGSSIDRAFNFNRRVGP
Ga0318541_106922552	3300031545	Soil	MGVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSYYRRNGNFSGSSIDRAFNFNRR
Ga0318538_102154223	3300031546	Soil	RESDMSGRTVGNLILVTLICVVIFWVFMALRPARAGETPVYGLDGKYQGSVFDYGRTQTYTDRNGQFNGSAVNNGNGTTSFFNRNGTFSGSAGSSIDRAFNFNRRVGP
Ga0318571_100653713	3300031549	Soil	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGSDGKYKGSVFDYGRTQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSIDRAFNFNRR
Ga0318571_103237801	3300031549	Soil	GMSGRRLGNLILMTLTCVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTMTFYGRSGQITGSAGSSIDRAFNFNRTGRR
Ga0318528_106006361	3300031561	Soil	RYERQCWRCRGVGAFRTNLLGEQTMKSIGYLILMGVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSYYRRNGNFSGSSIDRAFNFNRR
Ga0318515_100716254	3300031572	Soil	DRESDMSGRTIGNLILMTLICVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTMTFYGRSGQITGSAGSSIDRAFNFNRTGRR
Ga0310915_100676732	3300031573	Soil	MKSIGYLILMGVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSYYRRNGNFSGSSIDRAFNFNRR
Ga0318542_100607141	3300031668	Soil	VIFWVFMALRPARAGETPVYGLDGKYQGSVFDYGRTQTYTDRNGQFNGSAVNNGNGTTSFFNRNGTFSGSAGSSIDRAFNFNRRVGP
Ga0318561_103220033	3300031679	Soil	NLILVTLICVVIFWVFMALRPARAGETPVYGLDGKYQGSVFDYGRTQTYTDRNGQFNGSAVNNGNGTTSFFNRNGTFSGSAGSSIDRAFNFNRRVGP
Ga0318574_108506311	3300031680	Soil	MTERQCWRCRGVGAFRTNLLGEQTMKSIGYLILMGVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSYYRRNGN
Ga0306918_1000225111	3300031744	Soil	GPRAVDRVRREADRESDMSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGSDGKYKGSVFDYGRAQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSIDRAFNFNRR
Ga0306918_100114029	3300031744	Soil	RASWVRHVESDSPPSGNRPRVTISGTRYERQCWRCRGVGAFRTNLLGEQTMKSIGYLILMGVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSYYRRNGNFSGSSIDRAFNFNRR
Ga0318502_101821341	3300031747	Soil	MSGRTVGNLILVTLICVVIFWVFMALRPARAGETPVYGLDGKYQGSVFDYGRTQTYTDRNGQFNGSAVNNGNGTTSFFNRNGQFSGSAGSSIDRAFNFNKR
Ga0318502_103487561	3300031747	Soil	CARREVDREGGMSGRRLGNLILMTLTCVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTTTFYGRSGQITGSAGSSIDRPFNFNRTGRR
Ga0318492_102937783	3300031748	Soil	CVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTMTFYGRSGQITGSAGSSIDRAFNFNRTGRR
Ga0318494_103767351	3300031751	Soil	CIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSYYRRNGNFSGSSIDRAFNFNRR
Ga0318509_106904611	3300031768	Soil	QTMKSIGYLILMGVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGSGTTSFYGPRGNFQGSTGSSFDRAFNFKK
Ga0318526_101667682	3300031769	Soil	DMSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGSDGKYKGSVFDYGRAQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSIDRAFNFNRR
Ga0318498_102487371	3300031778	Soil	VNRKGPRAVECARREVDREGGMSGRRLGNLILMTLTCVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTMTFYGRSGQITGSAGSSIDRAFNFNRTGRR
Ga0318498_104014522	3300031778	Soil	NLDGGALHYGLFLFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGSGTTSFYGPRGNFQGSTGSSFDRAFNFKK
Ga0318547_106193662	3300031781	Soil	SEVDRESDMSGRTIGNLILMTLICVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTMTFYGRSGQITGSAGSSIDRAFNFNRTGRR
Ga0318568_105218851	3300031819	Soil	LILMTLICVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTMTFYGRSGQITGSAGSSIDRAFNFNRTGRR
Ga0310917_109274382	3300031833	Soil	SGTRYERQCWRCRGVGAFRTNLLGEQTMKSIGYLILMGVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSYYRRNGNFSGSSIDRAFNFNRR
Ga0318511_100601001	3300031845	Soil	RTVGNLILVTLICVVIFWVFMALRPARAGETPVYGLDGKYQGSVFDYGRTQTYTDRNGQFNGSAVNNGNGTTSFFNRNGTFSGSAGSSIDRAFNFNRRVGP
Ga0318512_100911181	3300031846	Soil	MSGRRLGNLILMTLTCVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTTTFYGRSGQITGSAGSSIDRPFNFNRTGRR
Ga0318544_100894901	3300031880	Soil	VEKGRAVDRARSEVDRESDMSGRTIGNLILMTLICVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTTTFYGRSGQITGSAGSSIDRPFNFNRTGRR
Ga0306921_103673901	3300031912	Soil	LILVTLICVVIFWVFMALRPARAGETPVYGLDGKYQGSVFDYGRTQTYTDRNGQFNGSAVNNGNGTTSFFNRNGTFSGSAGSSIDRAFNFNRRVGP
Ga0310916_101648215	3300031942	Soil	DAARESDMSGRTVGNLILVTLICVVIFWVFMALRPARAGETPVYGLDGKYQGSVFDYGRTQTYTDRNGQFNGSAVNNGNGTTSFFNRNGTFSGSAGSSIDRAFNFNRRVGP
Ga0310909_100260435	3300031947	Soil	MSGRRLGNLILMTLTCVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTMTFYGRSGQITGS
Ga0318530_104344171	3300031959	Soil	TLICVVIFWVFMALRPARAGETPVYGLDGKYQGSVFDYGRTQTYTDRNGQFNGSAVNNGNGTTSFFNRNGQFSGSAGSSIDRAFNFNKR
Ga0318562_102539363	3300032008	Soil	MSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGSDGKYKGSVFDYGRAQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSIDRAFNFGRSR
Ga0310911_108146091	3300032035	Soil	CVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTTTFYGRSGQITGSAGSSIDRPFNFNRTGRR
Ga0318545_100503291	3300032042	Soil	ARESDMSGRTVGNLILVTLICVVIFWVFMALRPARAGETPVYGLDGKYQGSVFDYGRTQTYTDRNGQFNGSAVNNGNGTTSFFNRNGTFSGSAGSSIDRAFNFNRRVGP
Ga0318556_100329086	3300032043	Soil	NLILMTLICVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTTTFYGRSGQITGSAGSSIDRPFNFNRTGRR
Ga0318506_100120025	3300032052	Soil	VDRVRREADRESDMSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGSDGKYKGSVFDYGRAQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSIDRAFNFNRR
Ga0318506_103189461	3300032052	Soil	GNLILMTLICVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTMTFYGRSGQITGSAGSSIDRAFNFNRTGRR
Ga0318570_100501122	3300032054	Soil	RESDMSGRTIGNLILMTLVCVVIFVVFMAMRPAPAGETPIYGSDGKYKGSVFDYGRAQTYTDRNGHFTGSAINNGNGTTSFFNRNGNFTGSAGSSIDRAFNFNRR
Ga0318577_104283412	3300032091	Soil	RGVGAFRTNLLGEQTMKSIGYLILMGVLCIMVFFVFMAMRPAPAMAQQTPIYGPDGKYQGSVFNYGRTQTYTDRNGHFSGSAINNGNGTTSYYRRNGNFSGSSIDRAFNFNRR
Ga0318540_101127971	3300032094	Soil	SGDVDAARESDMSGRTVGNLILVTLICVVIFWVFMALRPARAGETPVYGLDGKYQGSVFDYGRTQTYTDRNGQFNGSAVNNGNGTTSFFNRNGTFSGSAGSSIDRAFNFNRRVGP
Ga0318519_100232882	3300033290	Soil	MSGRRLGNLILMTLTCVVIFVVFMAFRPARSEEMPVYDANGHYAGSVFDYGKTQTYTDRSGHFTGSAINQGNGTTTFYGRSGQITGSAGSSIDRAFNFNRTGRR
Ga0318519_103984881	3300033290	Soil	VVIFWVFMALRPARAGETPVYGLDGKYQGSVFDYGRTQTYTDRNGQFNGSAVNNGNGTTSFFNRNGTFSGSAGSSIDRAFNFNRRVGP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091669

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences