NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F091613

Metagenome / Metatranscriptome Family F091613

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F091613
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 85 residues
Representative Sequence MSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTVNNDEEGND
Number of Associated Samples 88
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.87 %
% of genes near scaffold ends (potentially truncated) 29.91 %
% of genes from short scaffolds (< 2000 bps) 72.90 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (30.841 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(21.495 % of family members)
Environment Ontology (ENVO) Unclassified
(42.056 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(42.991 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.96%    β-sheet: 0.00%    Coil/Unstructured: 59.04%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF00149Metallophos 1.87
PF13578Methyltransf_24 1.87
PF00535Glycos_transf_2 0.93
PF13392HNH_3 0.93
PF03819MazG 0.93
PF01844HNH 0.93
PF01510Amidase_2 0.93


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.77 %
UnclassifiedrootN/A25.23 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000786|WSSedA2C2DRAFT_1023205Not Available587Open in IMG/M
3300003404|JGI25920J50251_10007973Not Available3683Open in IMG/M
3300003497|JGI25925J51416_10001178Not Available6968Open in IMG/M
3300004112|Ga0065166_10250543All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium712Open in IMG/M
3300004123|Ga0066181_10202611Not Available564Open in IMG/M
3300004151|Ga0066602_10112971Not Available1146Open in IMG/M
3300004155|Ga0066600_10063074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191349Open in IMG/M
3300004240|Ga0007787_10026916All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4192458Open in IMG/M
3300004481|Ga0069718_16305770Not Available715Open in IMG/M
3300004767|Ga0007750_1021845All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.690Open in IMG/M
3300004793|Ga0007760_11340372All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.600Open in IMG/M
3300005662|Ga0078894_10257850All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191581Open in IMG/M
3300005828|Ga0074475_10912658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191119Open in IMG/M
3300006802|Ga0070749_10624781All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.580Open in IMG/M
3300006920|Ga0070748_1015781All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4193209Open in IMG/M
3300007538|Ga0099851_1029276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4192210Open in IMG/M
3300007540|Ga0099847_1000312Not Available16702Open in IMG/M
3300007542|Ga0099846_1211832All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.681Open in IMG/M
3300007973|Ga0105746_1210939All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.664Open in IMG/M
3300008114|Ga0114347_1002512Not Available13328Open in IMG/M
3300008117|Ga0114351_1175657All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium1149Open in IMG/M
3300008120|Ga0114355_1238926Not Available544Open in IMG/M
3300008266|Ga0114363_1034588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4192104Open in IMG/M
3300008267|Ga0114364_1013247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4193667Open in IMG/M
3300008267|Ga0114364_1020947All Organisms → cellular organisms → Bacteria2718Open in IMG/M
3300008267|Ga0114364_1088481All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.994Open in IMG/M
3300008448|Ga0114876_1235509All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.583Open in IMG/M
3300009081|Ga0105098_10672338All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.547Open in IMG/M
3300009082|Ga0105099_10055865All Organisms → Viruses → Predicted Viral2089Open in IMG/M
3300009085|Ga0105103_10102763All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1486Open in IMG/M
3300009149|Ga0114918_10057791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4192564Open in IMG/M
3300009165|Ga0105102_10284153All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.852Open in IMG/M
3300009165|Ga0105102_10720393Not Available562Open in IMG/M
3300009169|Ga0105097_10064076Not Available1989Open in IMG/M
3300009169|Ga0105097_10254592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin419967Open in IMG/M
3300009169|Ga0105097_10921927Not Available502Open in IMG/M
3300009170|Ga0105096_10133038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191247Open in IMG/M
3300009184|Ga0114976_10134497All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1393Open in IMG/M
3300010354|Ga0129333_10647270All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon913Open in IMG/M
3300010354|Ga0129333_10731793All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin419848Open in IMG/M
3300011268|Ga0151620_1006168All Organisms → Viruses → Predicted Viral4406Open in IMG/M
3300011268|Ga0151620_1053472All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191327Open in IMG/M
3300012266|Ga0136712_1016348All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.817Open in IMG/M
3300012665|Ga0157210_1000267Not Available24781Open in IMG/M
3300013004|Ga0164293_10237823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191293Open in IMG/M
3300013006|Ga0164294_10030948All Organisms → Viruses → Predicted Viral4285Open in IMG/M
3300013014|Ga0164295_10026922All Organisms → Viruses → Predicted Viral4400Open in IMG/M
(restricted) 3300013132|Ga0172372_10061508All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4193486Open in IMG/M
(restricted) 3300013133|Ga0172362_10532846All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.803Open in IMG/M
3300015050|Ga0181338_1010905Not Available1487Open in IMG/M
3300017707|Ga0181363_1086093Not Available535Open in IMG/M
3300017716|Ga0181350_1138750All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.573Open in IMG/M
3300017747|Ga0181352_1017163Not Available2271Open in IMG/M
3300017754|Ga0181344_1122772All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.748Open in IMG/M
3300017766|Ga0181343_1191449All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.562Open in IMG/M
3300017788|Ga0169931_10570681All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.776Open in IMG/M
3300020074|Ga0194113_10179903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191718Open in IMG/M
3300020109|Ga0194112_10305959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191201Open in IMG/M
3300020151|Ga0211736_10335261All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.973Open in IMG/M
3300020160|Ga0211733_10761497Not Available2588Open in IMG/M
3300020162|Ga0211735_10765988All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191099Open in IMG/M
3300020172|Ga0211729_10082255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191034Open in IMG/M
3300021961|Ga0222714_10004935Not Available12874Open in IMG/M
3300021961|Ga0222714_10049608All Organisms → Viruses → Predicted Viral2920Open in IMG/M
3300021961|Ga0222714_10298980All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.883Open in IMG/M
3300021962|Ga0222713_10450514All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.780Open in IMG/M
3300021963|Ga0222712_10189809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191354Open in IMG/M
3300021963|Ga0222712_10407098Not Available825Open in IMG/M
3300022179|Ga0181353_1009378All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2430Open in IMG/M
3300022179|Ga0181353_1031181All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon1412Open in IMG/M
3300022179|Ga0181353_1044441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191172Open in IMG/M
3300022190|Ga0181354_1002426Not Available4383Open in IMG/M
3300022407|Ga0181351_1067087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191461Open in IMG/M
3300022407|Ga0181351_1086254All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1240Open in IMG/M
3300024262|Ga0210003_1209046Not Available794Open in IMG/M
3300027563|Ga0209552_1184292All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.524Open in IMG/M
3300027581|Ga0209651_1035521All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191525Open in IMG/M
3300027693|Ga0209704_1060316All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4191048Open in IMG/M
3300027719|Ga0209467_1228108Not Available640Open in IMG/M
3300027721|Ga0209492_1000808Not Available9676Open in IMG/M
3300027792|Ga0209287_10035363All Organisms → Viruses → Predicted Viral1820Open in IMG/M
3300027804|Ga0209358_10275430All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin419837Open in IMG/M
3300027899|Ga0209668_10339864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin419972Open in IMG/M
3300027899|Ga0209668_10958299All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.577Open in IMG/M
3300027900|Ga0209253_10682638Not Available743Open in IMG/M
3300027900|Ga0209253_11190134All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.512Open in IMG/M
3300027917|Ga0209536_101523240Not Available813Open in IMG/M
3300027972|Ga0209079_10266902All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.582Open in IMG/M
3300028025|Ga0247723_1021102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4192191Open in IMG/M
3300028025|Ga0247723_1038198Not Available1450Open in IMG/M
3300031539|Ga0307380_10083720All Organisms → Viruses → Predicted Viral3346Open in IMG/M
3300031565|Ga0307379_11153835All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.646Open in IMG/M
3300031758|Ga0315907_10622131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin419834Open in IMG/M
3300031758|Ga0315907_11033919All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.590Open in IMG/M
3300031857|Ga0315909_10288243All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1235Open in IMG/M
3300032050|Ga0315906_10491050All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon1041Open in IMG/M
3300032050|Ga0315906_10778498All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.754Open in IMG/M
3300032050|Ga0315906_11050917All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.607Open in IMG/M
3300032116|Ga0315903_10629519All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.817Open in IMG/M
3300033521|Ga0316616_100114566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium ADurb.Bin4192432Open in IMG/M
3300033557|Ga0316617_101200407All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium753Open in IMG/M
3300033816|Ga0334980_0014344Not Available3422Open in IMG/M
3300033994|Ga0334996_0151176All Organisms → Viruses1291Open in IMG/M
3300034061|Ga0334987_0535775All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.705Open in IMG/M
3300034062|Ga0334995_0066556All Organisms → Viruses2858Open in IMG/M
3300034093|Ga0335012_0433038All Organisms → Viruses → environmental samples → uncultured virus637Open in IMG/M
3300034106|Ga0335036_0487913All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.771Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake21.50%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment12.15%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater10.28%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton6.54%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater6.54%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water5.61%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous4.67%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment3.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater3.74%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake2.80%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater2.80%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater1.87%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface1.87%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.87%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.87%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.87%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment1.87%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.93%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.93%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.93%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.93%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.93%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.93%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.93%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.93%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.93%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000786Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A2 CattailEnvironmentalOpen in IMG/M
3300003404Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMDEnvironmentalOpen in IMG/M
3300003497Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DNEnvironmentalOpen in IMG/M
3300004112Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)EnvironmentalOpen in IMG/M
3300004123Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (version 2)EnvironmentalOpen in IMG/M
3300004151Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5EnvironmentalOpen in IMG/M
3300004155Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11EnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300004767Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004793Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005828Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.182_BBIEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300008114Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NAEnvironmentalOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009170Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009184Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaGEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300011268Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555EnvironmentalOpen in IMG/M
3300012266Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA to study Microbial Dark Matter (Phase II) - JTO19cm metaGEnvironmentalOpen in IMG/M
3300012665Freshwater microbial communities from Talbot River, Ontario, Canada - S11EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300013014Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaGEnvironmentalOpen in IMG/M
3300013132 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5mEnvironmentalOpen in IMG/M
3300013133 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2EnvironmentalOpen in IMG/M
3300015050Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017707Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.NEnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020109Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400mEnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027563Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027581Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027693Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027719Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11 (SPAdes)EnvironmentalOpen in IMG/M
3300027721Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027792Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027804Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027972Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300033816Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005EnvironmentalOpen in IMG/M
3300033994Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034093Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
WSSedA2C2DRAFT_102320523300000786WetlandMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDSVMAKSVEEGKIKPAPTELKAE*
JGI25920J50251_1000797383300003404Freshwater LakeMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTINKDDEEAND*
JGI25925J51416_1000117833300003497Freshwater LakeMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILXLPEAPAIILADXANTALDSIMAKSVEEGKIKPAPTQLTINKDDEEAND*
Ga0065166_1025054333300004112Freshwater LakeDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPSHLTVNNDEEAND*
Ga0066181_1020261113300004123Freshwater LakeLKSLYKPITIMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKP
Ga0066602_1011297143300004151FreshwaterMSYDPTQKYIWSPDEKIELTGQEFAMVVNAVRSILNLPEAPAIILADKANSALDNVMAKNVEEGKIKPAPTQLSVNNDEEGND*
Ga0066600_1006307423300004155FreshwaterMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDNVMAKSVEEGKIKPAPTQLSVNNDEEGND*
Ga0007787_1002691623300004240Freshwater LakeMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTHLTVNNDEEGND*
Ga0069718_1630577013300004481SedimentMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDNVMAKSVEEGKIKPAPTQLSVNRDEEGND*
Ga0007750_102184523300004767Freshwater LakeMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTVNNDEEGND*
Ga0007760_1134037213300004793Freshwater LakeIMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTINKDDEEAND*
Ga0078894_1025785033300005662Freshwater LakeMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTHLTVNNDEEGND*
Ga0074475_1091265833300005828Sediment (Intertidal)MSYDPTQKYIWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTQLTVNNDEEADA*
Ga0070749_1062478113300006802AqueousIMSYDPTQKYIWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPSQLTVNNDEEADA*
Ga0070748_101578173300006920AqueousMSYDPTQKYIWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPSQLTVNNDEEADA*
Ga0099851_102927653300007538AqueousLKSFYKPIKTMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPSQLTVNNDEEADA*
Ga0099847_1000312213300007540AqueousLKSFYKPIIIMSYDPTQKYIWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPSQLTVNNDEEADA*
Ga0099846_121183223300007542AqueousLKSFYKPIKTMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTVNRDDEETND*
Ga0105746_121093923300007973Estuary WaterMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTIHNDEEAND*
Ga0114347_1002512143300008114Freshwater, PlanktonLKSFYKPIKTMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDNVMAKSVEEGKIKPAPTQLSVNNDEEGND*
Ga0114351_117565743300008117Freshwater, PlanktonMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTVNRDDEETND*
Ga0114355_123892613300008120Freshwater, PlanktonLKSFYKPITIMSYDPTQKYIWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTHLTVNND
Ga0114363_103458853300008266Freshwater, PlanktonLKSFYKPITIMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTQLTINNDEEGND*
Ga0114364_101324753300008267Freshwater, PlanktonLKSFYKPIIIMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTVNRDEEGND*
Ga0114364_102094713300008267Freshwater, PlanktonITIMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTHLTVNNDEETND*
Ga0114364_108848143300008267Freshwater, PlanktonITIMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTQLTVNNDEEGND*
Ga0114876_123550913300008448Freshwater LakeKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTVNRDDEETND*
Ga0105098_1067233813300009081Freshwater SedimentYHLKSFYKPITIMSYDPTQKYIWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPSHLTVNNDEEAND*
Ga0105099_1005586543300009082Freshwater SedimentLKSFYKPITIMSYDPTQKYIWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANSALDSVMAKNVEAGKIKPAPTQLTVNNDEEGND*
Ga0105103_1010276333300009085Freshwater SedimentLKSFYKPIIIMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSVMAKNVETGKIKPAPTQLTVNNDEEGND*
Ga0114918_1005779143300009149Deep SubsurfaceLKSFYKPIIIMSYDPTQKYVWSPDEKIELTGQEFAMVVNAVRSILNLPEAPAIILADKANSALDSVMAKNVEEGKIKPAPTQLSVNNDEEAND*
Ga0105102_1028415323300009165Freshwater SedimentLKSFYKPIIIMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTQLTVNNDEEGND*
Ga0105102_1072039313300009165Freshwater SedimentMSYDPTQNYVWSPDEKIELTGVEFASVVNAVRSILNLPEAPAILLADRANQALDGVMMKNLELGKIRPAGPKTNMKIANEE*
Ga0105097_1006407623300009169Freshwater SedimentLKSFYKPIIIMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANSALDSVMAKNVEAGKIKPAPTQLTVNNDEEGND*
Ga0105097_1025459233300009169Freshwater SedimentLKSFYKPITIMSYDPTQKYIWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTHLTVNNDEEGND*
Ga0105097_1092192723300009169Freshwater SedimentLKSFYKPITIMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTHLTVNNDEEGND*
Ga0105096_1013303843300009170Freshwater SedimentLKSFYKPITIMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANSALDSVMAKNVEAGKIKPAPTQLTVNNDEEGND*
Ga0114976_1013449723300009184Freshwater LakeLKSFYKPKTIMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTIHKDEEGND*
Ga0129333_1064727013300010354Freshwater To Marine Saline GradientSFYKPIIIMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDNVMAKSVEEGKIKPAPTELTSE*
Ga0129333_1073179313300010354Freshwater To Marine Saline GradientLKSFYKPIIIMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSVMAKNVEAGKIKPAPTQLTVNNDEEGND*
Ga0151620_100616833300011268FreshwaterLKSFYKPIKTMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDSVMAKSVEEGKIKPAPTQLSVNNDEEGND*
Ga0151620_105347233300011268FreshwaterMSYDPTQKYIWSPDEKIELTGQEFAMVVNAVRSILNLPEAPAIILADKANSALDSIMAKSVEQGKIKPAPTQLTIHNDEEGND*
Ga0136712_101634833300012266FreshwaterLKSFYKPITIMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDNVMAKSVEEGKIKPAPTQLSVNNDEEGND*
Ga0157210_1000267273300012665FreshwaterLKSFYKPIIIMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEQGKIKPAPTQLTIHNDEEGND*
Ga0164293_1023782343300013004FreshwaterLKSFYKPIIIMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTIHKDEEGND*
Ga0164294_1003094813300013006FreshwaterTIMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTINKDDEEAND*
Ga0164295_1002692233300013014FreshwaterLKLLYKPITIMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTINKDDEEAND*
(restricted) Ga0172372_1006150883300013132FreshwaterLKSFYKPIIIMSYDPTQKYVWSPDEKIELTGQEFAMVVNAVRSILNLPEAPAIILAEKANTALDNIMAKNVEVGKIKPAPTELNAE*
(restricted) Ga0172362_1053284633300013133SedimentLKSFYKPIIIMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILAEKANTALDNIMAKNVEEGKIKPAPTELNAE*
Ga0181338_101090523300015050Freshwater LakeLKSLYKPITIMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTINKDDEEAND*
Ga0181363_108609323300017707Freshwater LakeLKSFYKPITIMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTHLTVNNDEEAND
Ga0181350_113875033300017716Freshwater LakeMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTVNNDEEGND
Ga0181352_101716363300017747Freshwater LakeMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPSHLTVNNDEEAND
Ga0181344_112277233300017754Freshwater LakeSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTHLTVNNDEEGND
Ga0181343_119144923300017766Freshwater LakeMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTHLTVNNDEEGND
Ga0169931_1057068113300017788FreshwaterMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILAEKANTALDNIMAKNVEVGKIKPAPTELNAE
Ga0194113_1017990353300020074Freshwater LakeMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDNVMAKNVEVGKIKPAPTELQAE
Ga0194112_1030595923300020109Freshwater LakeMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDNVMAKSVEEGKIKPAPTELQAE
Ga0211736_1033526133300020151FreshwaterMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTVNRDDEETND
Ga0211733_1076149773300020160FreshwaterSRQRAQYHLKSFYKPITIMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDNVMAKSVEEGKIKPAPTQLSVNRDEEGND
Ga0211735_1076598823300020162FreshwaterMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDNVMAKSVEEGKIKPAPTQLSVNRDEEGND
Ga0211729_1008225533300020172FreshwaterMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTVNRDDEETND
Ga0222714_10004935143300021961Estuarine WaterMSYDPTQKYIWSPDEKIELTGQEFAMVVNAVRSILNLPEAPAIILADKANSALDSIMAKSVEQGKIKPAPTQLTIHNDEEGND
Ga0222714_1004960833300021961Estuarine WaterMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDSVMAKSVEEGKIKPAPTELKAE
Ga0222714_1029898033300021961Estuarine WaterMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDNVMAKSVEEGKIKPAPTQLSVNNDEEGND
Ga0222713_1045051433300021962Estuarine WaterYKPIIIMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDNVMAKSVEEGKIKPAPTQLSVNNDEEGND
Ga0222712_1018980933300021963Estuarine WaterMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDSVMAKSVEEGKIKPAPTQLSVNNDEEGND
Ga0222712_1040709833300021963Estuarine WaterMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPSQLTINNDEEGND
Ga0181353_100937863300022179Freshwater LakeMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTHLTVNNDEEGND
Ga0181353_103118113300022179Freshwater LakeTIMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPSHLTVNNDEEAND
Ga0181353_104444133300022179Freshwater LakeMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDNVMAKSVEEGKIKPAPTQLSVNRDEEGND
Ga0181354_100242683300022190Freshwater LakeMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTHLTVNNDEEGND
Ga0181351_106708743300022407Freshwater LakeMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTINKDDE
Ga0181351_108625413300022407Freshwater LakeTIMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTINKDDEEAND
Ga0210003_120904633300024262Deep SubsurfaceMSYDPTQKYVWSPDEKIELTGQEFAMVVNAVRSILNLPEAPAIILADKANSALDSVMAKNVEEGKIKPAPTQLSVNNDEEAND
Ga0209552_118429213300027563Freshwater LakeSLYKPITIMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTINKDDEEAND
Ga0209651_103552133300027581Freshwater LakeMSYDPTQKYIWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTINKDDEEAND
Ga0209704_106031613300027693Freshwater SedimentMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTIHKDEEGND
Ga0209467_122810823300027719FreshwaterMSYDPTQKYIWSPDEKIELTGQEFAMVVNAVRSILNLPEAPAIILADKANSALDNVMAKNVEEGKIKPAPTQLSVNNDEEGND
Ga0209492_100080873300027721Freshwater SedimentMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTQLTVNNDEEGND
Ga0209287_1003536343300027792Freshwater SedimentMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANSALDSVMAKNVEAGKIKPAPTQLTVNNDEEGND
Ga0209358_1027543013300027804Freshwater LakeMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDNVMAKSVEEGKIKPAPT
Ga0209668_1033986443300027899Freshwater Lake SedimentMSYDPTQKYIWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAP
Ga0209668_1095829933300027899Freshwater Lake SedimentPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPSHLTVNNDEEGND
Ga0209253_1068263833300027900Freshwater Lake SedimentLKSFYKPITIMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTHLTVNNDEEGND
Ga0209253_1119013413300027900Freshwater Lake SedimentPITIMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTHLTVNNDEEGND
Ga0209536_10152324013300027917Marine SedimentLKSFYKPIIIMSYDPTQKYIWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPSQLTVNNDEEADA
Ga0209079_1026690223300027972Freshwater SedimentMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSVMAKNVETGKIKPAPTQLTVNNDEEGND
Ga0247723_102110253300028025Deep Subsurface SedimentMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTIHKDEEE
Ga0247723_103819863300028025Deep Subsurface SedimentMSYDPTQKYVWSPDEKIELTGQEFAMVVNAVRSILNLPEAPAVILADKANTALDSVMAKSVEQGKIKPAPTQLTINNDEEGND
Ga0307380_1008372053300031539SoilMSYDPTQKYVWSPDEKIELTGQEFAMVVNAVRSILNLPEAPAIILADKANSALDSVMAKNVEEGKIKPAPTQLSVNKDEEAND
Ga0307379_1115383533300031565SoilKIELTGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTVNRDDEETND
Ga0315907_1062213113300031758FreshwaterMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTHLTVNNDEETND
Ga0315907_1103391913300031758FreshwaterTCQRVLRQRAQYHLKSFYKPITIMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTQLTINNDEEGND
Ga0315909_1028824333300031857FreshwaterMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTQLTINNDEEGND
Ga0315906_1049105043300032050FreshwaterKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANSALDNVMAKSVEEGKIKPAPTQLSVNNDEEGND
Ga0315906_1077849813300032050FreshwaterQRAQYHLKSFYKPIKTMSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTVNRDDEETND
Ga0315906_1105091733300032050FreshwaterTCQKVLRQRAQYHLKSFYKPIIIMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTQLTINNDEEGND
Ga0315903_1062951933300032116FreshwaterSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTQLTINNDEEGND
Ga0316616_10011456623300033521SoilMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANSALDNIMAKSVEEGKIKPAPTELTSE
Ga0316617_10120040733300033557SoilMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANSALDSIMAKNVEAGKIKPAPSQLTIHNDEEGND
Ga0334980_0014344_3193_34203300033816FreshwaterYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANSALDSVMAKNVEAGKIKPAPTQLTVNNDEEGND
Ga0334996_0151176_558_8093300033994FreshwaterMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTQLTVNNDEEGDD
Ga0334987_0535775_172_4233300034061FreshwaterMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANSALDSVMAKNVEAGKIKPAPTQLTVNNDEKGND
Ga0334995_0066556_2609_28573300034062FreshwaterSYDPTQKYVWSPDEKIELTGQEFAIVVNAVRSILNLPEAPAIILADKANTALDSIMAKSVEEGKIKPAPTQLTIHKDEEGND
Ga0335012_0433038_68_3193300034093FreshwaterMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTQLTIHSDEEGND
Ga0335036_0487913_298_5493300034106FreshwaterMSYDPTQKYVWSPDEKIELNGQEFAMVVNAVRSILNLPEAPAIILADKANTALDSIMAKNVEAGKIKPAPTHLTVNKDEEGND

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.