Metagenome / Metatranscriptome Family F091591

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091591
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	84 residues
Representative Sequence	KNSQKFRVIFKGDGSENDIGMYMTIQQMTEQFATVNARATCWDALLQLANMRYFAKVDGKPVPTGLGTTIRGKQIQVDLV
Number of Associated Samples	83
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	37.38 %
% of genes near scaffold ends (potentially truncated)	60.75 %
% of genes from short scaffolds (< 2000 bps)	81.31 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (36.449 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (41.121 % of family members)
Environment Ontology (ENVO)	Unclassified (77.570 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (87.850 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.70% β-sheet: 18.52% Coil/Unstructured: 52.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00004	AAA	2.80
PF04434	SWIM	1.87
PF00149	Metallophos	1.87
PF01027	Bax1-I	1.87
PF00574	CLP_protease	1.87
PF14090	HTH_39	0.93
PF12850	Metallophos_2	0.93
PF01541	GIY-YIG	0.93
PF05488	PAAR_motif	0.93
PF00782	DSPc	0.93
PF00112	Peptidase_C1	0.93
PF13578	Methyltransf_24	0.93
PF11750	DUF3307	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.74
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	3.74
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.87
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	1.87
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	1.87
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	1.87
COG4104	Zn-binding Pro-Ala-Ala-Arg (PAAR) domain, involved in Type VI secretion	Intracellular trafficking, secretion, and vesicular transport [U]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.49 %
Unclassified	root	N/A	35.51 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	59.81 %
Unclassified	root	N/A	35.51 %
cellular organisms	root	All Organisms → cellular organisms	4.67 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	36.45 %
Unclassified	root	N/A	35.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.67 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	36.45 %
Unclassified	root	N/A	35.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	36.45 %
Unclassified	root	N/A	35.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.93 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	36.45 %
Unclassified	root	N/A	35.51 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.93 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	34.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.93 %
unclassified Chlorobiota	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.51 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	34.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	21.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.93 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002835\|B570J40625_100442844	All Organisms → Viruses → Predicted Viral	1244	Open in IMG/M
3300003388\|JGI25910J50241_10143615	Not Available	625	Open in IMG/M
3300003393\|JGI25909J50240_1020639	All Organisms → Viruses → Predicted Viral	1517	Open in IMG/M
3300003411\|JGI25911J50253_10197491	Not Available	557	Open in IMG/M
3300003431\|JGI25913J50563_1069059	Not Available	536	Open in IMG/M
3300003852\|Ga0031655_10090904	All Organisms → Viruses → Predicted Viral	1243	Open in IMG/M
3300004693\|Ga0065167_1095037	Not Available	521	Open in IMG/M
3300004763\|Ga0007746_1300774	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1373	Open in IMG/M
3300004770\|Ga0007804_1035042	All Organisms → Viruses → Predicted Viral	1346	Open in IMG/M
3300004774\|Ga0007794_10190297	Not Available	612	Open in IMG/M
3300005581\|Ga0049081_10120549	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300005584\|Ga0049082_10274245	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	566	Open in IMG/M
3300005585\|Ga0049084_10125050	Not Available	910	Open in IMG/M
3300005662\|Ga0078894_10756226	Not Available	854	Open in IMG/M
3300005662\|Ga0078894_11273488	Not Available	619	Open in IMG/M
3300006072\|Ga0007881_1169919	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	528	Open in IMG/M
3300006805\|Ga0075464_10013056	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4142	Open in IMG/M
3300008110\|Ga0114343_1235648	Not Available	501	Open in IMG/M
3300008113\|Ga0114346_1131328	All Organisms → Viruses → Predicted Viral	1098	Open in IMG/M
3300008261\|Ga0114336_1062143	All Organisms → Viruses → Predicted Viral	1881	Open in IMG/M
3300008267\|Ga0114364_1179684	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	543	Open in IMG/M
3300009068\|Ga0114973_10038299	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2869	Open in IMG/M
3300009151\|Ga0114962_10226812	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1076	Open in IMG/M
3300009151\|Ga0114962_10701024	Not Available	518	Open in IMG/M
3300009151\|Ga0114962_10729492	Not Available	505	Open in IMG/M
3300009152\|Ga0114980_10202385	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1168	Open in IMG/M
3300009154\|Ga0114963_10099371	Not Available	1780	Open in IMG/M
3300009154\|Ga0114963_10193051	All Organisms → Viruses → Predicted Viral	1183	Open in IMG/M
3300009154\|Ga0114963_10210401	Not Available	1121	Open in IMG/M
3300009158\|Ga0114977_10039403	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2949	Open in IMG/M
3300009158\|Ga0114977_10229077	Not Available	1079	Open in IMG/M
3300009158\|Ga0114977_10525002	Not Available	646	Open in IMG/M
3300009159\|Ga0114978_10152224	All Organisms → Viruses → Predicted Viral	1489	Open in IMG/M
3300009159\|Ga0114978_10851599	Not Available	511	Open in IMG/M
3300009161\|Ga0114966_10344391	Not Available	888	Open in IMG/M
3300009164\|Ga0114975_10064675	All Organisms → Viruses → Predicted Viral	2138	Open in IMG/M
3300009164\|Ga0114975_10429709	Not Available	717	Open in IMG/M
3300009164\|Ga0114975_10482310	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	669	Open in IMG/M
3300009183\|Ga0114974_10317105	Not Available	913	Open in IMG/M
3300009183\|Ga0114974_10525930	Not Available	660	Open in IMG/M
3300009187\|Ga0114972_10383539	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	814	Open in IMG/M
3300009684\|Ga0114958_10017955	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4164	Open in IMG/M
3300009684\|Ga0114958_10094730	All Organisms → Viruses → Predicted Viral	1544	Open in IMG/M
3300010158\|Ga0114960_10435128	Not Available	637	Open in IMG/M
3300010160\|Ga0114967_10058537	All Organisms → Viruses → Predicted Viral	2389	Open in IMG/M
3300010160\|Ga0114967_10074494	All Organisms → cellular organisms → Bacteria → Proteobacteria	2041	Open in IMG/M
3300010160\|Ga0114967_10167344	All Organisms → Viruses → Predicted Viral	1207	Open in IMG/M
3300010312\|Ga0102883_1191113	Not Available	580	Open in IMG/M
3300010334\|Ga0136644_10031326	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3531	Open in IMG/M
3300010334\|Ga0136644_10110318	All Organisms → Viruses → Predicted Viral	1703	Open in IMG/M
3300010334\|Ga0136644_10149644	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	1420	Open in IMG/M
3300010334\|Ga0136644_10525620	Not Available	658	Open in IMG/M
3300010334\|Ga0136644_10674313	Not Available	563	Open in IMG/M
3300010885\|Ga0133913_10554023	All Organisms → Viruses → Predicted Viral	3024	Open in IMG/M
3300010885\|Ga0133913_13488179	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1026	Open in IMG/M
3300010885\|Ga0133913_13598236	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1007	Open in IMG/M
3300011010\|Ga0139557_1032440	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	921	Open in IMG/M
3300011010\|Ga0139557_1032908	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	913	Open in IMG/M
3300012347\|Ga0157142_1000281	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	19627	Open in IMG/M
3300012933\|Ga0157211_1000096	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	20043	Open in IMG/M
3300013005\|Ga0164292_10786234	All Organisms → Viruses	602	Open in IMG/M
3300013094\|Ga0164297_10103289	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1203	Open in IMG/M
3300013295\|Ga0170791_12008335	Not Available	554	Open in IMG/M
3300014050\|Ga0119952_1100821	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	676	Open in IMG/M
3300017716\|Ga0181350_1029850	All Organisms → Viruses → Predicted Viral	1504	Open in IMG/M
3300017723\|Ga0181362_1054190	Not Available	831	Open in IMG/M
3300019784\|Ga0181359_1212145	Not Available	615	Open in IMG/M
3300020205\|Ga0211731_11083909	Not Available	646	Open in IMG/M
3300021137\|Ga0214165_1085974	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	620	Open in IMG/M
3300021519\|Ga0194048_10100635	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1113	Open in IMG/M
3300022190\|Ga0181354_1110359	Not Available	890	Open in IMG/M
3300022407\|Ga0181351_1098696	All Organisms → Viruses → Predicted Viral	1132	Open in IMG/M
3300023184\|Ga0214919_10000079	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	148133	Open in IMG/M
3300023311\|Ga0256681_10055890	All Organisms → Viruses → Predicted Viral	1654	Open in IMG/M
3300025372\|Ga0207957_1018225	Not Available	869	Open in IMG/M
3300025396\|Ga0208874_1001322	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7172	Open in IMG/M
3300025423\|Ga0208746_1043999	Not Available	720	Open in IMG/M
3300025466\|Ga0208497_1029870	All Organisms → Viruses → Predicted Viral	1181	Open in IMG/M
3300025723\|Ga0208741_10039129	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1099	Open in IMG/M
3300025723\|Ga0208741_10121859	Not Available	600	Open in IMG/M
3300025781\|Ga0208386_1019351	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1050	Open in IMG/M
3300025896\|Ga0208916_10049251	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1726	Open in IMG/M
3300027649\|Ga0208960_1134953	Not Available	630	Open in IMG/M
3300027708\|Ga0209188_1033119	All Organisms → Viruses → Predicted Viral	2448	Open in IMG/M
3300027747\|Ga0209189_1350292	Not Available	560	Open in IMG/M
3300027754\|Ga0209596_1033509	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2868	Open in IMG/M
3300027754\|Ga0209596_1044553	All Organisms → cellular organisms → Bacteria → Proteobacteria	2367	Open in IMG/M
3300027760\|Ga0209598_10293470	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	639	Open in IMG/M
3300027764\|Ga0209134_10047635	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1418	Open in IMG/M
3300027770\|Ga0209086_10418708	Not Available	532	Open in IMG/M
3300027782\|Ga0209500_10119865	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1276	Open in IMG/M
3300027785\|Ga0209246_10038315	All Organisms → Viruses → Predicted Viral	1834	Open in IMG/M
3300027798\|Ga0209353_10006117	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6061	Open in IMG/M
3300027805\|Ga0209229_10322263	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	679	Open in IMG/M
3300027836\|Ga0209230_10226700	All Organisms → Viruses → Predicted Viral	1076	Open in IMG/M
3300027896\|Ga0209777_10149108	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1930	Open in IMG/M
3300027971\|Ga0209401_1224646	Not Available	687	Open in IMG/M
3300028394\|Ga0304730_1017666	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3948	Open in IMG/M
3300028394\|Ga0304730_1071651	All Organisms → Viruses → Predicted Viral	1595	Open in IMG/M
3300031784\|Ga0315899_11215671	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	652	Open in IMG/M
3300031857\|Ga0315909_10966434	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	518	Open in IMG/M
3300032579\|Ga0316228_1063037	Not Available	1425	Open in IMG/M
3300033233\|Ga0334722_10754747	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	690	Open in IMG/M
3300034082\|Ga0335020_0000405	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	33715	Open in IMG/M
3300034102\|Ga0335029_0245965	Not Available	1159	Open in IMG/M
3300034103\|Ga0335030_0021274	All Organisms → Viruses → Predicted Viral	4965	Open in IMG/M
3300034167\|Ga0335017_0404429	All Organisms → Viruses	739	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	97.20%
Marine	Environmental → Aquatic → Marine	2.80%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	57.01%
Lentic	Environmental → Aquatic → Freshwater → Lentic	34.58%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.87%
Ice	Environmental → Aquatic → Freshwater → Ice	1.87%
Coastal	Environmental → Aquatic → Marine → Coastal	1.87%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	56.07%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	29.91%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.87%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.93%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.93%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.93%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	41.12%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	14.02%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	10.28%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.54%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.74%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.74%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.74%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	1.87%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	1.87%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.93%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.93%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.93%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003431	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004693	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA7.5M (version 2)	Environmental	Open in IMG/M
3300004763	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010312	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300012347	Freshwater microbial communities from Fish Creek, Ontario, Canada - S48	Environmental	Open in IMG/M
3300012933	Freshwater microbial communities from Tributary to Mariposa, Ontario, Canada - S7	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300014050	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007B	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300021137	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025396	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025423	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025466	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025723	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025781	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027649	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032579	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18021	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1004428444	3300002835	Freshwater	KNSQKFRVIFKGDGSENDIGMYMTIQQMTEMFATVNARATCWDALIKLSYLRYEAKRKNEEVPTGLGHTIRGKQVQVDLV*
JGI25910J50241_101436151	3300003388	Freshwater Lake	MRTKTVFHGLKNSQXVRVIXKGDGSENDIGMYLTVKQITEQFATVNARSLCFDAMYELVQMRFLAETGRQPVPTGLGTTICGKQIQVDLI*
JGI25909J50240_10206392	3300003393	Freshwater Lake	MRTPTIIYGLKNSQKIRIIFKGDGSENDVGLHMTIQQAVTMFATVNARSLAWDALLQLSSMRQQAQKYQEPVPVGICTTIRGKQIQLDLA*
JGI25911J50253_101974912	3300003411	Freshwater Lake	MRTKTVFHGLKNSQKVRVIFKGDGSENDIGMYLTVKQITEQFATVNARSLCFDAMYELVQMRFLAETGRQPVPTGLGTTICGKQIQVDLI*
JGI25913J50563_10690592	3300003431	Freshwater Lake	MRTPTIIYGLKNSQKIRIIFKGDGSENDVGLYMTITQAVSMFATVNARSLAWDVLLQLSSMRQTAQKYNEPIPTGIGTTIRGKQIQLDLV*
Ga0031655_100909044	3300003852	Freshwater Lake Sediment	MRTHTIIHGLKNSQKVRVIFKGDGSENDIGIYLTIKQMVSTFATTNAQSLAWDVLLELSNVRQEAQKYNEPIPTGIGTTIRGKQIQLDLV*
Ga0065167_10950371	3300004693	Freshwater	TKTVIEGLKNSQKFRVIFKGDGSENDIGMYMTIQQMTEMFATVNARVLCWDAVQQLANEREFAKAIRKPIPTGLGTTIRGKQIQVDLV*
Ga0007746_13007744	3300004763	Freshwater Lake	MRTPTIIYGLKNSQKIRIIFKGDGSENEIGLYMTVQQSVTMFATALSRSLAWDALLQLSSIRQEAQKYNEPIPTGIGTTIRGKQIQVDLV*
Ga0007804_10350421	3300004770	Freshwater	MRTPTIIYGLKNSQKVRVIFKGDGSENDIGLYMTVQQMVSMFATTNARSLAWDVLLELSSKRQEAQKYNEPIPTGIGTTIRGKQIQLDLV*
Ga0007794_101902971	3300004774	Freshwater	MRTPTIIYGLKNSQKVRVIFKGDGSENDIGMYMTVKQMTEQFATVNARSLAWEVLIQLSNMRQEAQKYNEPVPSGIGTTIRGKQIQLDLV*
Ga0049081_101205491	3300005581	Freshwater Lentic	IDGFKNSQKFRVIFKGDGSENDVGMYMTIQQMTEMFATVNARATCWDSLIKLSYLRYEAKRTNQPLPTGLGHTLRGKQVQVDLV*
Ga0049082_102742452	3300005584	Freshwater Lentic	MRTPTIIYGLKNSQKIRIIFKGDGSENDIGMYLTIKQMTEQFATVNARSLCWEALLQLSSMRQEAQKYNELIPTGLGTTIRGKQIQLDLV*
Ga0049084_101250503	3300005585	Freshwater Lentic	MRTKTVFHGLKNSQKVRVIFKGDGSENDIGMYLTVKQITEQFATVNARSLCFDAMYELVQMRFLAETGRQPAPTGLGTTIRGKQIQVDLI*
Ga0078894_107562262	3300005662	Freshwater Lake	NSQKFRIIFKGDGSENDIGMYMTIQQMTEQFATVNARSLCWDAMIKLSYLRYEAKRKNEQIPTGLGDTFRGKQVQVDLV*
Ga0078894_112734882	3300005662	Freshwater Lake	IDGFKNSQKFRVIFKGDGSENDIGLYLTIKQINEQFATVNARSLCYDALNMLATDREFAKALRKPVPTGLGITIRGKQIQVDLV*
Ga0007881_11699191	3300006072	Freshwater	MRRKQIIKGFKNNQKFRVIFKGDGSENDIGMYMTIQQMSEQFATVNARSLCWEAMEKLANIRQAEKQGGGIMPVGLGATIRNRQIQVDLV*
Ga0075464_100130561	3300006805	Aqueous	MRTPTLAHGLKNSQKVRVIFKGDGSENDIGIYLTVKQMNDQFATVNARTLAWDALMKLVRMRYIAPFAKEPRPTGLSTTIRGKQVQIDLM*
Ga0114343_12356482	3300008110	Freshwater, Plankton	TIIEGFKNSQKFRVIFKGDGSENDIGFYMTVQQMTEQFATVMARCICWEALIQLSYERRMADATRKPIPTGLGTTIRGKQVQVDLV*
Ga0114346_11313281	3300008113	Freshwater, Plankton	GDGSENDIGMYMTIQQMTEMFATVNARVTCWDSLIKLSYLRYEAKRTNQPLPTGLGHTLRGKQVQVDLV*
Ga0114336_10621437	3300008261	Freshwater, Plankton	KNSQKFRVIFKGDGSENDIGMYMTIKQMTEMFATVNARVLCWEALIQLSYERRMAEATRKPVPTGLGTTIRNKQIQIDLI*
Ga0114364_11796842	3300008267	Freshwater, Plankton	KNSQKFRVIFKGDGSENDIGMYMTIKQMTEMFATVNARVLCWEALIQLSYERRMAEATRKPVPTGLGTTIRNKQIQIDLV*
Ga0114973_100382992	3300009068	Freshwater Lake	MRKKTVIEGLKNSQKFRVIFRGGGSENDIGMYMTIQQMTEMFATVNARSLCWEAMEMLAASRLLAKAHCKEIPTGLGTTIRGKHIQVDLV*
Ga0114962_102268124	3300009151	Freshwater Lake	SQKFRVIFKGDGSENDIGMYLTIKQMSEQFATVNARTLCWDAMIKLSYLRYNAKVYNEPIPTGLGDTFRGKQIQVDLV*
Ga0114962_107010242	3300009151	Freshwater Lake	RVIFKGDGSENDIGMYMTIQQMTEQFATVNARATCWDALLQLANMRYFAKVDGKPVPTGLGTTIRGKQIQVDLV*
Ga0114962_107294921	3300009151	Freshwater Lake	NSQKFRVIFKGDGSENDIGMYMTVKQMTEQFATVNARATCWDALLQLANMRYFAKVDGKPIPSGLGTTIRGKQIQVDLV*
Ga0114980_102023851	3300009152	Freshwater Lake	IIDGFKNSQKFRVIFKGDGSENDIGMYMTVQQMTEMFATNTARTVCWDALIKLSYLRYEAKRKNETVPTGLGHTFRNKQVQLDLV*
Ga0114963_100993711	3300009154	Freshwater Lake	RKTIIEGFKNSQKFRVIFKGDGSENEIGLYMTVQQMTEQFATVMARTVCWEAVEMLARMRRVEKACGGIAPVGLGATIRGRQVQVDLC*
Ga0114963_101930513	3300009154	Freshwater Lake	MRTPTVIYGLKNSQKFRVIFKGDGSENEIGLYMTISQMTTMFATTLARTLVWEALLQLSFMRQEAQRYNEPVPTGLGTTIRNKQIQVDLV*
Ga0114963_102104014	3300009154	Freshwater Lake	SQKFRVIFKGDGSENDVGLYLTISQMTTQFATVTARVICWEALIQLSYERRMADATRKPVPTGLGTTIRGKQVQVDLI*
Ga0114977_100394031	3300009158	Freshwater Lake	IFKGDGSENDIGLYLTISQMTTQFATVTARVICWEALIQLSYERRMADATRKPIPTGLGTTIRGKQVQVDLV*
Ga0114977_102290771	3300009158	Freshwater Lake	FKNSQKFRVIFKGDGSENDIGMYLTIKQMSEQFATVNARATCWDAMIKLSYLRYEAKRKNEPEPTGLGHTIRGKQVQVDLV*
Ga0114977_105250023	3300009158	Freshwater Lake	FKNSQKFRVIFKGDGSENDIGMYMTVKQMTEQFATVNARATCWEALLQLSNMRQEAQKYKELVPTGLGTTIRGKQIQLDLV*
Ga0114978_101522244	3300009159	Freshwater Lake	FKNSQKFRVIFKGDGSENDIGMYMTVQQMTEMFATNTARTVCWDALIKLSYLRYEAKRKNETVPTGLGHTFRNKQVQVDLV*
Ga0114978_108515991	3300009159	Freshwater Lake	MRTKTVIEGFKISQKFRVIFKGDGSENDIGMYMTVKQMTEQFATVNARATCWDALLQLANMRYFAKVDGKPIPSGLGTTIRGKQIQVDLV*
Ga0114966_103443912	3300009161	Freshwater Lake	MRTKTVFHGLKNSQKVRVIFKGDGSENDIGMYLTVKQITEQFATVNARSLCFDAMYELVRMRFLAETCRQPVPTGLGTTIRGKQIQVDLI*
Ga0114975_100646751	3300009164	Freshwater Lake	QKFRVIFKGDGSENDIGMYMTVQQMTEMFATNTARTVCWDALIKLSYLRYEAKRKNETVPTGLGHTFRNKQVQLDLV*
Ga0114975_104297091	3300009164	Freshwater Lake	RVIFKGDGSENDIGLYLTISQMTTQFATVTARVICWEAMIQLSYERRMAMATSKPVPTGLGTTIRGKQIQVDLV*
Ga0114975_104823101	3300009164	Freshwater Lake	QKFRVIFKGDGSENDIGMYMTVQQMTEMFATNTARTVCWDALIKLSYLRYEAKRKNETVPTGLGHTFRNKQVQVDLV*
Ga0114974_103171051	3300009183	Freshwater Lake	IIEGFKNSQKFRVIFKGDGSENDIGLYLTISQMTNQFATVTARVICWEALIQLSYERRMAMATSKPVPTGLGTTIRGKQIQVDLV*
Ga0114974_105259301	3300009183	Freshwater Lake	KNSQKFRVIFKGDGSENDIGMYMTVKQMTEQFATVNARATCWDALLQLANMRYFAKVDGKPVPTGLGTTIRGKQIQVDLV*
Ga0114972_103835392	3300009187	Freshwater Lake	LTKIAIFGYNNSIVNKKEFQMRKKTVIEGLKNSQKFRVIFRGGGSENDIGMYMTIQQMTEMFATVNARSLCWEAMEMLAASRLLAKAHCKEIPTGLGTTIRGKHIQVDLV*
Ga0114958_100179559	3300009684	Freshwater Lake	FKGDGSENDIGMYMTIQQMTEQFATVNARATCWDALLQLANMRYFAKVDGKPVPSGLGTTIRGKQIQVDLV*
Ga0114958_100947305	3300009684	Freshwater Lake	VIFTGDGSENDIGMYMTIQQMTEMFATVNARVLCWDAVQQLANEREFAKALRKPIPTGLGTTIRGKQIQVDLV*
Ga0114960_104351281	3300010158	Freshwater Lake	IIEGLKNSQKFRVIFKGDGSENDIGMYMTIKQMTEMFATVNARVLCWDAVQQLANEREFAKAIRKPVPTGLGTTIRGKQIQVDLV*
Ga0114967_100585371	3300010160	Freshwater Lake	GSENDIGMYMTIKQMTEQFATVTARTVCWEALLKLSYMRYNAKKDNALMPVGLGVTIRGKQVQLDLV*
Ga0114967_100744941	3300010160	Freshwater Lake	KNSQKFRVIFKGDGSENDIGMYMSIQQMTEMFATVNARVLCWDALLQLGRMRYFAQKDGNPVPSGLGTTIRGKQIQVDLV*
Ga0114967_101673441	3300010160	Freshwater Lake	KTIIDGLKNSQKFRVIFKGDGSENDIGMYMSIQQMTEMFATVNARVLCWDALLQLGRMRYFAQKDGNPVPSGLGTTIRGKQIQVDLV*
Ga0102883_11911132	3300010312	Estuarine	FKGDGSENDIGMYMTVQQMTEMFATVNARATCWDSLIKLSYLRYEAKRTNQPIPTGIGHTLRGKQVQVDLV*
Ga0136644_100313267	3300010334	Freshwater Lake	SQKFRVIFKGDGSENDIGMYMTIQQMTEMFATVNARVLCWDAVQQLANEREFAKAIRKPVPTGLGTTIRGKQIQVDLV*
Ga0136644_101103181	3300010334	Freshwater Lake	KNSQKFRVIFKGDGSENDIGMYMTIQQMTEQFATVNARATCWDALLQLANMRYFAKVDGKPVPTGLGTTIRGKQIQVDLV*
Ga0136644_101496441	3300010334	Freshwater Lake	IIDGFKNSQKFRVIFKGDGSENDIGLYLTISQMTEQFATVNARVICWEALIQLSYERRTAEATRKPIPTGLGTTIRGKQVQVDLV*
Ga0136644_105256203	3300010334	Freshwater Lake	ENDIGMYMTIQQMTEMFATVNARVLCWDAMEMLAAERYLAKAHRKDIPTGLGTTIRGKQIQVDLV*
Ga0136644_106743132	3300010334	Freshwater Lake	FKNSQKFRVIFKGDGSENDIGMYMTVKQMTEQFATVNARATCWDALLQLANMRYFAKVDGKPVPSGLGTTIRGKQIQVDLV*
Ga0133913_105540231	3300010885	Freshwater Lake	TIIYGFKNSQKFRVIFKGDGSENEIGLYMTIKQMTEMFATTLSRDLAWDALLKLSSERQVAQKHNELIPTGLGTTIRGKQIQIDLV*
Ga0133913_134881794	3300010885	Freshwater Lake	DGSENDIGMYLTIKQMSEQFATVNARTLCWDAMIKLSYLRYNAKVYNEPIPTGLGDTFRGKQIQVDLV*
Ga0133913_135982363	3300010885	Freshwater Lake	SQKFRVIFKGDGSENDIGMYMTIQQMTEQFATVNARATCWDALLQLANMRYFAKVDGKPVPTGLGTTIRGKQIQVDLV*
Ga0139557_10324401	3300011010	Freshwater	TVIEGLKNSQKFRVIFKGDGSENDIGMYMTIKQMTEMFATVNARVLCWEALIKLSYERRMAEATRKPIPSGIGTTIRGKQVQVDLV*
Ga0139557_10329081	3300011010	Freshwater	TVIEGLKNSQKFRVIFKGDGSENDIGMYMTIKQMTEMFATVNARVLCWEALIQLSYERRMAEATRKPVPTGLGTTIRNKQIQIDLV*
Ga0157142_100028153	3300012347	Freshwater	MRTPTIIYGLKNSQKIRIIFKGDGSENDVGLHMTIQQAVTMFATVNARSLAWEALIQLSSMRQDAQKYKEPTPVGICTTIRGKQIQLDLV*
Ga0157211_100009643	3300012933	Freshwater	RTKMRTPTIIYGLKNSQKIRIIFKGDGSENDVGLHMTIQQAVTMFATVNARSLAWEALIQLSSMRQDAQKYKEPTPVGICTTIRGKQIQLDLV*
Ga0164292_107862342	3300013005	Freshwater	MRTPTIIYGLKNSQKIRIIFKGDGSENDVGLYMTITQAVSMFATTMSRSLAWDALLQLSSMRQEAQKYNDPVPSGIGTTIRGKQIQVDLV*
Ga0164297_101032893	3300013094	Freshwater	MRRKTIIDGLKNSQRFRVIFKGDGSENDIGFYMTIQQMTEQFATVNARASCWDALLQLGLERYFARRDGKVEPTGIGTTIRGKQIQVDLV*
Ga0170791_120083351	3300013295	Freshwater	IIDGFKNSRKFRVIFKGDGSENDIGMYLTIKQMSEQFATVNARSLCYDAMNMLATDREFAKALRKPIPTGLGITIRGKQIQVDLV*
Ga0119952_11008211	3300014050	Freshwater	RIIFKGDGSENDIGMYMTIQQMTEQFATVNARSLCWDAMIKLSYLRYEAKRKNEPIPTGLGDTFRGKQVQVDLV*
Ga0181350_10298504	3300017716	Freshwater Lake	MRTKTVFHGLKNSQKVRVIFKGDGSENDIGMYLTVKQITEQFATVNARSLCFDAMYELVQMRFLAETGRQPVPTGLGTIICGKQIQVDLI
Ga0181362_10541901	3300017723	Freshwater Lake	MFHGLKNSQKVRVIFKGDGSENDIGMYLTVKQITEQFATVNARSLCFDAMYELVQMRFLAETGRQPVPTGLGTTIRGKQIQVDLI
Ga0181359_12121452	3300019784	Freshwater Lake	MRTKTVFHGLKNSQKVRVIFKGDGSENDIGMYLTVKQITEQFATVNARSLCFDAMYELVQMRFLAETGRQPVPTGLGTTICGKQIQVDLI
Ga0211731_110839092	3300020205	Freshwater	FKNSQKFRVIFKGDGSENDIGMYMTVQQMTEMFATNTARTVCWDALIKLSYLRYEAKRKNETVPTGLGHTFRNKQVQVDLV
Ga0214165_10859742	3300021137	Freshwater	MRRKQIIKGFKNSQKLRVIFKGDGSENDIGMYMTIQQMSEQFATVNARSLCWEAMEKLANIRQAEKQGGGIMPVGLGATIRNRHIQVDLV
Ga0194048_101006353	3300021519	Anoxic Zone Freshwater	MRTPTIIYGLKNSQKIRIIFKGDGSENEIGLYMTVQQSVTMFATVLSRSLAWEALLQLSSMRQEAQKYNEPIPSGIGTTIRGKQIQVDLV
Ga0181354_11103592	3300022190	Freshwater Lake	MRTKTVFHGLKNSQKVRVIFKGDGSENDIGMYLTVKQITEQFATVNARSLCFDAMYELVQMRFLAETGRQPVPTGLGTTIRGKQIQVDLI
Ga0181351_10986962	3300022407	Freshwater Lake	MRTKTVFHGLKNSQKVRVIFKGDGSENDIGMYLTVKQITEQFATVNARSLCFDAMYELVQMRFLAETGGQPVPTGLGPTIRGKQIQVDLI
Ga0214919_1000007994	3300023184	Freshwater	MRTKTVFHGLKNSQKVRVIFKGDGSENDIGMYLTVKQITEQFATVNARSLCFDAMYELVQMRFLAETGKQPVPTGLGTTIRGKQIQVDLI
Ga0256681_100558902	3300023311	Freshwater	MRRKTIIAGLKNSQKFRVIFKGDGSENDIGMYLTIQQMTEQFATVNARTLCWEAMLQLGRERYFAQKDSKPIPTGLGTTIRGKQIQVDLV
Ga0207957_10182253	3300025372	Freshwater	MRTHTIIHGLKNSQKVRVIFKGDGSENDIGIYLTIKQMVSTFATTNAQSLAWDVLLELSNVRQEAQKYNEPIPTGIGTTIRGKQIQLDLV
Ga0208874_100132212	3300025396	Freshwater	MRRKQIIKGFKNNQKFRVIFKGDGSENDIGMYMTIQQMSEQFATVNARSLCWEAMEKLANIRQAEKQGGGIMPVGLGATIRNRQIQVDLV
Ga0208746_10439991	3300025423	Freshwater	QKVRVIFKGDGSENDIGLYMTVQQMVSMFATTNARSLAWDVLLELSSKRQEAQKYNEPIPTGIGTTIRGKQIQLDLV
Ga0208497_10298704	3300025466	Freshwater	MRTPTIIYGLKNSQKVRVIFKGDGSENDIGLYMTVQQMVSMFATTNARSLAWDVLLELSSKRQEAQKYNEPIPTGIGTTIRGKQIQLDLV
Ga0208741_100391293	3300025723	Freshwater	MRRKQIIPGLKNSQKIRVIFKGDGSENDIGMYMTIQQMTEQFATVNARVLCWDALLQLGRERYFAQKDGKVVPTGLGATIRGKQIQVDLV
Ga0208741_101218592	3300025723	Freshwater	RKKTIIQGFKNSQKFRIIFKGDGSEKDIGMYFTIHQMDEQFATIHARSICYDALIDLSRLRSAAKREDKSLPVGLGTTIRGRQVQIDLV
Ga0208386_10193511	3300025781	Freshwater	MRRKQIIKGFKNNQKFRVIFKGDGSENDIGMYMTIQQMSEQFATVNARSLCWEAMEKLANIRQAEKQGGGIMPVGLGATIRNCHIQVDLV
Ga0208916_100492512	3300025896	Aqueous	MRTPTLAHGLKNSQKVRVIFKGDGSENDIGIYLTVKQMNDQFATVNARTLAWDALMKLVRMRYIAPFAKEPRPTGLSTTIRGKQVQIDLM
Ga0208960_11349533	3300027649	Freshwater Lentic	QKVRVIFKGDGSENDIGMYLTVKQITEQFATVNARSLCFDAMYELVQMRFLAETGRQPAPTGLGTTIRGKQIQVDLI
Ga0209188_10331193	3300027708	Freshwater Lake	MRTPTVIYGLKNSQKFRVIFKGDGSENEIGLYMTISQMTTMFATTLARTLVWEALLQLSFMRQEAQRYNEPVPTGLGTTIRNKQIQVDLV
Ga0209189_13502922	3300027747	Freshwater Lake	FKNSQKFRVIFKGDGSENDIGMYMTVKQMTEQFATVNARATCWDALLQLANMRYFAKVDGKPVPSGLGTTIRGKQIQVDLV
Ga0209596_10335099	3300027754	Freshwater Lake	KFRVIFKGDGSENDIGMYMSIQQMTEMFATVNARVLCWDALLQLGRMRYFAQKDGNPVPSGLGTTIRGKQIQVDLV
Ga0209596_10445534	3300027754	Freshwater Lake	GLKNSQKFRVIFKGDGSENDIGMYMSIQQMTEMFATVNARVLCWDALLQLGRMRYFAQKDGNPVPSGLGTTIRGKQIQVDLV
Ga0209598_102934702	3300027760	Freshwater Lake	MRKKTVIEGLKNSQKFRVIFRGGGSENDIGMYMTIQQMTEMFATVNARSLCWEAMEMLAASRLLAKAHCKEIPTGLGTTIRGKHIQVDLV
Ga0209134_100476353	3300027764	Freshwater Lake	MRTPTIIYGLKNSQKIRIIFKGDGSENDVGLYMTITQAVSMFATVNARSLAWDVLLQLSSMRQTAQKYNEPIPTGIGTTIRGKQIQLDLV
Ga0209086_104187082	3300027770	Freshwater Lake	MRTPTIIYGLKNSQKVRVIFKGDGSENDIGMYMTVKQMTEQFATVNARSLAWEVLIQLSNMRQEAQKYNEPVPSGIGTTIRGKQIQLDLV
Ga0209500_101198651	3300027782	Freshwater Lake	VIFKGDGSENDIGMYLTIKQMSEQFATATARVTCWEAMLKLAYLRYEAKRKNETVPTGLGTTIRNKQVQVDLV
Ga0209246_100383152	3300027785	Freshwater Lake	MRTPTIIYGLKNSQKIRIIFKGDGSENDVGLHMTIQQAVTMFATVNARSLAWEALIQLSSMRQEAQKHKEPTPVGICTTIRGKQIQLDLA
Ga0209353_100061172	3300027798	Freshwater Lake	MRTPTIIYGLKNSQKIRIIFKGDGSENDVGLHMTIQQAVTMFATVNARSLAWDALLQLSSMRQQAQKYQEPVPVGICTTIRGKQIQLDLA
Ga0209229_103222633	3300027805	Freshwater And Sediment	MRTKTIIDGFNNSQRFRVIFKGDGSENDIGMYLTIKQMTEQFATATARTVCWDAMIKLSYLRYEAKRKNETVPTGLGHTFRGKQVQVDLV
Ga0209230_102267002	3300027836	Freshwater And Sediment	GFKNSQKFRVIFKGDGSENDVGMYMTIQQMTEMFATVNARVTCWDSLIKLSYLRYEAKRTNQPLPTGLGHTLRGKQVQVDLV
Ga0209777_101491088	3300027896	Freshwater Lake Sediment	QIIKGFKNSQKFRVIFKGDGSENDIGMYMTIQQMSEQFATVNARSLCWEAMEKLANIRQAEKQGGGIMPVGLGATIRNSHIQVDLV
Ga0209401_12246463	3300027971	Freshwater Lake	QKFRVIFKGDGSENDIGMYMTIQQMTEMFATVNSRVLCWDAVQQLANEREFAKSLRKPIPTGLGTTIRGKQIQVDLV
Ga0304730_10176661	3300028394	Freshwater Lake	KNSQKFRVIFKGDGSENDIGMYMSIQQMTEMFATVNARVLCWDALLQLGRMRYFAQKDGNPVPSGLGTTIRGKQIQVDLV
Ga0304730_10716511	3300028394	Freshwater Lake	IFKGDGSENDIGMYMTIKQMTEMFATVNARATCWDALIKLSYLRYEANRTNQPIPTGLGHTIRGKQVQVDLV
Ga0315899_112156711	3300031784	Freshwater	VIFKGDGSENDIGMYMTIQQMTEMFATVNARVTCWDSLIKLSYLRYEAKRKNQPLPTGLGHTLRGKQVQVDLV
Ga0315909_109664342	3300031857	Freshwater	IFKGDGSENDIGMYMTVQQMTEMFATNTARTVCWDALIKLSYLRYEAKRKNETVPTGLGHTFRNKQVQVDLV
Ga0316228_10630375	3300032579	Freshwater	FRIIFKGDGSEKDIGMYFTIHQMDEQFATVHARSTCYDALIDLSRLRSAAKREDKSLPVGLGTTIRGRQVQIDLV
Ga0334722_107547472	3300033233	Sediment	MRTPTIIYGLKNSQKIRIIFKGDGSENDIGMYLTIKQMTEQFATVNARTLCWEALLQLSSMRQEAQKYNDLIPTGLGTTIRGKQVQVDLV
Ga0335020_0000405_1_252	3300034082	Freshwater	DGFKNSQKFRVIFKGDGSENDIGMYMTIQQMTEMFATVNARATCWDALIKLSYLRYEANRTNQPIPTGLGHTIRGKQVQVDLV
Ga0335029_0245965_2_208	3300034102	Freshwater	DGSENDIGMYMTIQQMTEMFATVNARVTCWDSLIKLSYLRYEAKRTNQPLPTGLGHTLRGKQVQVDLV
Ga0335030_0021274_3100_3372	3300034103	Freshwater	MRTPTIIYGLKNSQKIRIIFKGDGSENDVGLYMTITQAVSMFATTMSRSLAWDALLQLSSMRQEAQKYNDPVPSGIGTTIRGKQIQVDLV
Ga0335017_0404429_1_258	3300034167	Freshwater	IIDGFKNSQKFRVIFKGDGSENDIGMYMTIKQMTEMFATVNARATCWDALIKLSYLRYEAKRKNEEVPTGLGHTIRGKQVQVDLV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091591

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences