Metagenome / Metatranscriptome Family F091575

Basic Information
Family ID	F091575
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	41 residues
Representative Sequence	MAQIETISKAEAVKQQSRQLRGHIARDLADTATPFDKEGYS
Number of Associated Samples	101
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	93.46 %
% of genes near scaffold ends (potentially truncated)	98.13 %
% of genes from short scaffolds (< 2000 bps)	97.20 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Unclassified (52.336 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.776 % of family members)
Environment Ontology (ENVO)	Unclassified (32.710 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.664 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.78% β-sheet: 0.00% Coil/Unstructured: 65.22%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01053	Cys_Met_Meta_PP	45.79
PF02441	Flavoprotein	4.67
PF13404	HTH_AsnC-type	3.74
PF02547	Queuosine_synth	3.74
PF01037	AsnC_trans_reg	1.87
PF04403	PqiA	0.93
PF08734	GYD	0.93
PF03886	ABC_trans_aux	0.93
PF00583	Acetyltransf_1	0.93
PF00078	RVT_1	0.93
PF01113	DapB_N	0.93
PF13412	HTH_24	0.93
PF00732	GMC_oxred_N	0.93
PF06983	3-dmu-9_3-mt	0.93
PF00561	Abhydrolase_1	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	45.79
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	45.79
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	45.79
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	45.79
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	45.79
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	45.79
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	45.79
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	45.79
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	45.79
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	45.79
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	45.79
COG0809	S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)	Translation, ribosomal structure and biogenesis [J]	3.74
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.93
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.93
COG2995	Intermembrane transporter PqiABC subunit PqiA	Cell wall/membrane/envelope biogenesis [M]	0.93
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.93
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
All Organisms	root	All Organisms	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
cellular organisms	root	All Organisms → cellular organisms	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.79 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.19 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.51 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	1.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	23.36 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7.48 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1.87 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.36 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	2.80 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1.87 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.36 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.87 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	1.87 %
Acetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter	0.93 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	23.36 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1.87 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1.87 %
Acetobacter malorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter → Acetobacter malorum	0.93 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004081\|Ga0063454_101333000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	603	Open in IMG/M
3300004082\|Ga0062384_100480856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	819	Open in IMG/M
3300004091\|Ga0062387_101433038	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300004643\|Ga0062591_101170140	Not Available	746	Open in IMG/M
3300005169\|Ga0066810_10104714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	631	Open in IMG/M
3300005332\|Ga0066388_101102967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1344	Open in IMG/M
3300005355\|Ga0070671_100153079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1948	Open in IMG/M
3300005435\|Ga0070714_100582374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1073	Open in IMG/M
3300005454\|Ga0066687_10055314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1866	Open in IMG/M
3300005553\|Ga0066695_10874760	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005764\|Ga0066903_102899983	Not Available	930	Open in IMG/M
3300006806\|Ga0079220_11793705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300006893\|Ga0073928_10836488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	634	Open in IMG/M
3300007265\|Ga0099794_10540711	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300009012\|Ga0066710_104088927	Not Available	545	Open in IMG/M
3300009156\|Ga0111538_12369876	Not Available	666	Open in IMG/M
3300010043\|Ga0126380_10999602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300010048\|Ga0126373_12413874	Not Available	585	Open in IMG/M
3300010341\|Ga0074045_10766519	Not Available	611	Open in IMG/M
3300010360\|Ga0126372_11686077	Not Available	675	Open in IMG/M
3300010361\|Ga0126378_13010172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300010366\|Ga0126379_12978022	Not Available	567	Open in IMG/M
3300010376\|Ga0126381_101186546	Not Available	1103	Open in IMG/M
3300010398\|Ga0126383_12746503	Not Available	575	Open in IMG/M
3300011271\|Ga0137393_10324588	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300011999\|Ga0120148_1111520	Not Available	524	Open in IMG/M
3300012096\|Ga0137389_10894504	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300012209\|Ga0137379_11066908	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300012469\|Ga0150984_113585365	Not Available	699	Open in IMG/M
3300012922\|Ga0137394_11478441	Not Available	539	Open in IMG/M
3300012930\|Ga0137407_12417179	Not Available	502	Open in IMG/M
3300012948\|Ga0126375_11620043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300015357\|Ga0134072_10068456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1028	Open in IMG/M
3300016319\|Ga0182033_11104392	Not Available	708	Open in IMG/M
3300016387\|Ga0182040_10396091	Not Available	1082	Open in IMG/M
3300016387\|Ga0182040_11877680	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300016422\|Ga0182039_11512144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300016445\|Ga0182038_10319336	Not Available	1276	Open in IMG/M
3300017792\|Ga0163161_11552782	Not Available	582	Open in IMG/M
3300017933\|Ga0187801_10159908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	881	Open in IMG/M
3300017943\|Ga0187819_10836115	Not Available	516	Open in IMG/M
3300017970\|Ga0187783_10324490	Not Available	1122	Open in IMG/M
3300017973\|Ga0187780_10441933	Not Available	925	Open in IMG/M
3300017995\|Ga0187816_10028308	All Organisms → cellular organisms → Bacteria → Proteobacteria	2255	Open in IMG/M
3300018062\|Ga0187784_11368700	Not Available	561	Open in IMG/M
3300018469\|Ga0190270_11502218	Not Available	723	Open in IMG/M
3300020579\|Ga0210407_10806180	Not Available	724	Open in IMG/M
3300020579\|Ga0210407_11135166	Not Available	591	Open in IMG/M
3300021086\|Ga0179596_10108982	Not Available	1270	Open in IMG/M
3300021170\|Ga0210400_10621220	Not Available	891	Open in IMG/M
3300021358\|Ga0213873_10148300	Not Available	705	Open in IMG/M
3300021372\|Ga0213877_10312616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300021404\|Ga0210389_11168491	Not Available	593	Open in IMG/M
3300021432\|Ga0210384_10982972	Not Available	746	Open in IMG/M
3300021445\|Ga0182009_10056026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1684	Open in IMG/M
3300021479\|Ga0210410_11582521	Not Available	548	Open in IMG/M
3300022533\|Ga0242662_10073998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	927	Open in IMG/M
3300022557\|Ga0212123_10750145	Not Available	594	Open in IMG/M
3300024288\|Ga0179589_10483791	Not Available	573	Open in IMG/M
3300025320\|Ga0209171_10500771	Not Available	602	Open in IMG/M
3300025926\|Ga0207659_11486090	Not Available	580	Open in IMG/M
3300025931\|Ga0207644_11696668	Not Available	529	Open in IMG/M
3300026330\|Ga0209473_1075402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1430	Open in IMG/M
3300026330\|Ga0209473_1176696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	835	Open in IMG/M
3300026552\|Ga0209577_10072380	Not Available	2855	Open in IMG/M
3300027703\|Ga0207862_1168802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300027768\|Ga0209772_10116304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	828	Open in IMG/M
3300027795\|Ga0209139_10059150	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1345	Open in IMG/M
3300027869\|Ga0209579_10739252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300028673\|Ga0257175_1131165	Not Available	503	Open in IMG/M
3300030659\|Ga0316363_10117065	Not Available	1169	Open in IMG/M
3300031545\|Ga0318541_10626977	Not Available	601	Open in IMG/M
3300031546\|Ga0318538_10659983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300031573\|Ga0310915_10133023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1708	Open in IMG/M
3300031640\|Ga0318555_10248385	All Organisms → cellular organisms → Bacteria → Proteobacteria	961	Open in IMG/M
3300031668\|Ga0318542_10275350	Not Available	859	Open in IMG/M
3300031681\|Ga0318572_10234079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1078	Open in IMG/M
3300031708\|Ga0310686_111137492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter → Acetobacter malorum	626	Open in IMG/M
3300031723\|Ga0318493_10774532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300031751\|Ga0318494_10654183	Not Available	615	Open in IMG/M
3300031751\|Ga0318494_10840394	Not Available	538	Open in IMG/M
3300031754\|Ga0307475_11058483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300031764\|Ga0318535_10098431	Not Available	1279	Open in IMG/M
3300031770\|Ga0318521_10164873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1265	Open in IMG/M
3300031770\|Ga0318521_10781597	Not Available	581	Open in IMG/M
3300031780\|Ga0318508_1243827	Not Available	516	Open in IMG/M
3300031798\|Ga0318523_10467414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300031819\|Ga0318568_10401668	Not Available	854	Open in IMG/M
3300031832\|Ga0318499_10425231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300031879\|Ga0306919_11252332	Not Available	563	Open in IMG/M
3300031896\|Ga0318551_10788274	Not Available	552	Open in IMG/M
3300031912\|Ga0306921_10191059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2400	Open in IMG/M
3300031941\|Ga0310912_10384609	Not Available	1092	Open in IMG/M
3300031941\|Ga0310912_11402729	Not Available	527	Open in IMG/M
3300031945\|Ga0310913_10323687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1089	Open in IMG/M
3300031946\|Ga0310910_11301446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300031954\|Ga0306926_12672517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300031959\|Ga0318530_10241993	Not Available	743	Open in IMG/M
3300032042\|Ga0318545_10137299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300032044\|Ga0318558_10237211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	895	Open in IMG/M
3300032059\|Ga0318533_10546384	Not Available	849	Open in IMG/M
3300032076\|Ga0306924_10828776	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1029	Open in IMG/M
3300032091\|Ga0318577_10516039	Not Available	569	Open in IMG/M
3300032892\|Ga0335081_10924594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1025	Open in IMG/M
3300032896\|Ga0335075_11272343	Not Available	631	Open in IMG/M
3300033004\|Ga0335084_12359405	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300033810\|Ga0314872_024469	Not Available	554	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.46%
Host-Associated	Host-Associated	6.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.11%
Aquatic	Environmental → Aquatic	9.35%
Plants	Host-Associated → Plants	6.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.11%
Freshwater	Environmental → Aquatic → Freshwater	6.54%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.61%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.54%
Loam	Environmental → Terrestrial → Soil → Loam	4.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.74%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.80%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.80%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.87%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033810	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_E	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063454_1013330001	3300004081	Soil	MVQIDSVSKPEAVKQQSRQLRGHIARDLRDTGTPFDKEGYSLLKFH
Ga0062384_1004808561	3300004082	Bog Forest Soil	MVQIDSVSKPEAVKQQSRQLRGHIARDLRDTATPFDKEGYSLLK
Ga0062387_1014330381	3300004091	Bog Forest Soil	VVQVVEPISSEKISKAEAIKLQSRHLRGHLARDLADTATPFDGEGYSLLKFH
Ga0062591_1011701402	3300004643	Soil	MPTPMDAEISAPMDVIDNISKAEAVKQQSRQLRGNLARDLADTEAPFDNTSYS
Ga0066810_101047141	3300005169	Soil	VAQIDTISKAEAIKQQSRQLRGTLATDLADTATPFDKVGYS
Ga0066388_1011029671	3300005332	Tropical Forest Soil	MVQIDTVSKAEAVKQQSRQLRGHIARDLPDAEKPFDNEGYS
Ga0070671_1001530791	3300005355	Switchgrass Rhizosphere	MEGSVARIDSISKAEAVKQQSRQLRGRLKEDLADTGKPFDK
Ga0070714_1005823741	3300005435	Agricultural Soil	MAEIQTLSKAEAVKQQSRQLRGNLVRDLADTAHPFDNAGYSL
Ga0066687_100553141	3300005454	Soil	MVQINSVSKAEAVKQQSRQLRGHIARDLADTTVPFDNQGYSLLKFH
Ga0066695_108747602	3300005553	Soil	VARIETVSKAEAIKQQSRQLRGKLAEDLADTATPFD
Ga0066903_1028999832	3300005764	Tropical Forest Soil	MAIIERLSKAEAIKQQSRQLRGNLARDLADATAPFDNDGYSL
Ga0079220_117937052	3300006806	Agricultural Soil	MAALDTISKAEAIKQQSRQLRGNLARDLADTAHPFD
Ga0073928_108364881	3300006893	Iron-Sulfur Acid Spring	MVQIDSVSKPEAIKQQSRQLRGHIARDLADTRTPFDKEGYSLLKFH
Ga0099794_105407111	3300007265	Vadose Zone Soil	VARIETVSKAEAIKQQSRQLRGRLAEDLADTATPFDKSGYSLLKFH
Ga0066710_1040889272	3300009012	Grasslands Soil	MAAIDTISKAEAVKQQSRQLRGNLATDLADTATPFD
Ga0111538_123698761	3300009156	Populus Rhizosphere	MSAPTDVIDNISKAEAVKQQSRQLRGTLARDLADTGTLFDKTGYSLLK
Ga0126380_109996021	3300010043	Tropical Forest Soil	MAQINTLSKAEAVKQQSRQLRGHIARDLADTGNPFDNEGYSLLKF
Ga0126373_124138742	3300010048	Tropical Forest Soil	MVQVKSVSKAEAVKQQSRQLRGHIARDLVDTTAPF
Ga0074045_107665192	3300010341	Bog Forest Soil	MVQVNSISKPEAVKQQSRQLRGHLARDLADTTAPFDKEGY
Ga0126372_116860772	3300010360	Tropical Forest Soil	MVQIDTVSKAEAVKQQSRQLRGHIARDLPDAEKPFDNEGYSLLK
Ga0126378_130101721	3300010361	Tropical Forest Soil	MGHRDAISKAEAVKQQSRRLRGNLVRDLGDTAAPFDNVGYSLLK
Ga0126379_129780221	3300010366	Tropical Forest Soil	VARIESVSKAEAIKQQSRQLRGKIAEDLVDSAVPFD
Ga0126381_1011865461	3300010376	Tropical Forest Soil	MAQINSVSKAEAVKQQSRQLRGNIARDLADTSTPFDKEGYSLLKFH
Ga0126383_127465032	3300010398	Tropical Forest Soil	VAQVESISKAEAVKQQSRHLRGHIARDLADTAAAFDKEG
Ga0137393_103245881	3300011271	Vadose Zone Soil	VARIETVSKAEAIKQQSRHLRGKLAEDLADTATPF
Ga0120148_11115201	3300011999	Permafrost	LPGFASEGGGVAQIDTISKAEAIKQQSRQLRGTLAQDLADTATPFDKVVYS
Ga0137389_108945042	3300012096	Vadose Zone Soil	VAQIETVSKAEAIKQKSRKLRGNLAQDLADTATPFDKA
Ga0137379_110669081	3300012209	Vadose Zone Soil	VAQIETVSKAEAIKQQSRQLRGNLAEDLADTATPFDKSGYSLLKFH
Ga0150984_1135853651	3300012469	Avena Fatua Rhizosphere	MARIETLSKAEILKQQSRQLRGNLARDLSDTATPFDNAG
Ga0137394_114784412	3300012922	Vadose Zone Soil	MVQIDTISKPEAIKQQSRQLRGHIARDLADTTAPFDKEGY
Ga0137407_124171791	3300012930	Vadose Zone Soil	VAQIDTVSKAEAIKQQSRQLRGKLAEDLADTATPF
Ga0126375_116200431	3300012948	Tropical Forest Soil	MVQIKPVSKAETVKQQSRQLRGHLARDLSDTAKPFDNE
Ga0134072_100684563	3300015357	Grasslands Soil	LGTTAVAALDTISKAEAIKQQSRHLRGNLARDLADTAHP
Ga0182033_111043922	3300016319	Soil	MAQIDAISKPEAIKQQSRQLRGHIARDIADTATPFDKEGYALLKF
Ga0182040_103960912	3300016387	Soil	VAQVESISKAEAVKHQSLQLRGHIARNLADMTVPFDKEE
Ga0182040_118776801	3300016387	Soil	MSSIEHLSKPEAVKQQSRQLRGHIARDLADTTAPFDKEGYSLLK
Ga0182039_115121441	3300016422	Soil	MAAIENVSKAEAIKQQSRQLRGNLARDLAETAAPFDN
Ga0182038_103193362	3300016445	Soil	MVQVKSLSKAEAVKQQSRQLRGHIARDLGDTGTPFDNEGYSLLKF
Ga0163161_115527822	3300017792	Switchgrass Rhizosphere	MSAPTDVIDNISKAEAVKQQSRQLRGTLARDLADT
Ga0187801_101599081	3300017933	Freshwater Sediment	MAQIETTSKAEAVKQQSRQLRGHIARDLADTSTPF
Ga0187819_108361152	3300017943	Freshwater Sediment	MEGSFVVQVVEKISKAEAIKQQSRQLRGRLVRDLADTATPFDG
Ga0187783_103244901	3300017970	Tropical Peatland	VVQPVELAGEKLSKAEATKRKSRGLRGHLARDLADTATPFDGEGYS
Ga0187780_104419331	3300017973	Tropical Peatland	VVQLVEKISKAEATKQQSHQLRGHLARDLADTATPFDGEGYSLLKFH
Ga0187816_100283081	3300017995	Freshwater Sediment	MAIIDTLSKAEAIKQQSRQLRGNLARDLADIANPFDNAGYSLLKFH
Ga0187784_113687002	3300018062	Tropical Peatland	VVHLVEKISKAEAVKQQSRQLRGHLARDLADVATPFDGEGYS
Ga0190270_115022182	3300018469	Soil	VAQIDTISKAEAIKQQSRQLRGTLARDLVDAATPFDKAGYGLL
Ga0210407_108061802	3300020579	Soil	MAQIDAISKPEAVKQQSRQLRGHIARDLGDTDTPF
Ga0210407_111351661	3300020579	Soil	VVQAVEKISKAEAVKQQSRRLRGHLARDLVDAATPFDGEG
Ga0179596_101089823	3300021086	Vadose Zone Soil	MAQIDAISKPEAVKQQSRQLRGHIARDLGDTTTPFDKEGYA
Ga0210400_106212201	3300021170	Soil	MVQINSISKAEAVKQQSRQLRGHIARDLADTAVPFDNQGYSLL
Ga0213873_101483001	3300021358	Rhizosphere	MTAFEKLSKSEATKEHSRQLRGRLAQDLADTTQPFDHE
Ga0213877_103126162	3300021372	Bulk Soil	MADIERLSKAEAIKQQSRQLRGNLARDLVDTTAPFDNAGYSL
Ga0210389_111684911	3300021404	Soil	MVQIDSVSKPEAIKQQSRQLRGHIARDLRDTGTPF
Ga0210384_109829722	3300021432	Soil	VVEAVEKISKAEATKQQSRQLRGHLARDLADTAMPF
Ga0182009_100560264	3300021445	Soil	MAEIQTLSKAEAVKQQSRQLRGNLVRDLADTAHPFDNAGYSLLKF
Ga0210410_115825212	3300021479	Soil	MVQIDSVSKPEAIKQQSRQLRGHIARDLRDTGTPFDKEGYSLLKF
Ga0242662_100739983	3300022533	Soil	MAAIENVSKPEAIKQQSRQLRGNLASDLADTATPFDNAGYSLLNTGVS
Ga0212123_107501452	3300022557	Iron-Sulfur Acid Spring	MAEIDSISKAEAVKQQSRQLRGRLAADLADAAQPFDKEGYSLL
Ga0179589_104837912	3300024288	Vadose Zone Soil	MVQIDTISKPEAVKQQSRQLRGHIARDLADTTTPFDKEGYAL
Ga0209171_105007712	3300025320	Iron-Sulfur Acid Spring	MAEIDSISKAEAVKQQSRQLRGRLAQDLADMAQPFDKEGYSLLKF
Ga0207659_114860902	3300025926	Miscanthus Rhizosphere	MDGTTPIQNVSKAEAVKQQSRGLRGNLVRDLADIATP
Ga0207644_116966682	3300025931	Switchgrass Rhizosphere	VARIDSISKAEAVKQQSRQLRGRLKEDLADTGKPFDKE
Ga0209473_10754023	3300026330	Soil	MASIDTVSKAEAVKQQSRQLRGNLARDLADTAHPFDNAGYSLLKF
Ga0209473_11766962	3300026330	Soil	MAALDTISKAEAIKQQSRQLRGNLAHDLADTAHPFDKT
Ga0209577_100723804	3300026552	Soil	MVQINTVSKAEAVKQQSRQLRGHIARDLADTTVPFDNQG
Ga0207862_11688022	3300027703	Tropical Forest Soil	MVQIKSVSKAEAVKQQSRQLRGHLARDLSDTASPFDNE
Ga0209772_101163041	3300027768	Bog Forest Soil	MAQIDTISKPEAIKQQSRQLRGHLTRDLAVPGTPFDKEGYALLK
Ga0209139_100591501	3300027795	Bog Forest Soil	MAQIDSISKPEAIKQQSRQLRGHLARDLAATSAPFDK
Ga0209579_107392522	3300027869	Surface Soil	VAQIETVSKAEAIKQQSRQLRGNLAADLADTTVPFDKTGYSLL
Ga0257175_11311652	3300028673	Soil	MAQIDAISKPEAIKQQSRQLRGHIARDLGDTTTPFDKEG
Ga0316363_101170652	3300030659	Peatlands Soil	VVQAVDKISKAEATKQQSRQLRGRLARDLADTATP
Ga0318541_106269772	3300031545	Soil	MADIESLSKAEAIKQQSRQLRGNLARDLADSTAPFDNAGYSLLK
Ga0318538_106599832	3300031546	Soil	MAAIENVSKAEAIKQQSRQLRGDLARDLAETAAPFDN
Ga0310915_101330231	3300031573	Soil	MAAIENVSKAEAIKQQSRQLRGNLARDLGETAVPFDNSGYSL
Ga0318555_102483851	3300031640	Soil	MPRPDAVSAAEAVKKWSRQLRGHLARDLADTAQPFDKEGYSLLK
Ga0318542_102753501	3300031668	Soil	MAQIDAISKPEAIKQQSRQLRGHIARDIADTATPF
Ga0318572_102340793	3300031681	Soil	MPRPDAVSAAEAVKKWSRQLRGHLARDLADTAQPFDKEGYS
Ga0310686_1111374921	3300031708	Soil	MAQIDSISRPEAIEQQSRQLRGHIARDLPDTKVPFDKEG
Ga0318493_107745322	3300031723	Soil	MAIIERLSKAEAIKQQSRQLRGNLARDLADATAPFDNDGYSLLKFH
Ga0318494_106541831	3300031751	Soil	MAQIETISKAEAVKQQSRQLRGHIARDLADTTTPFDKEGYALLK
Ga0318494_108403942	3300031751	Soil	MAVIERLSKAEAIKQQSRQLRGNLARDLADATAPFDNDA
Ga0307475_110584832	3300031754	Hardwood Forest Soil	MVQIETVSKAEAVKQQSRHLRGNLARDLADTATPFDNTGYSLLK
Ga0318535_100984311	3300031764	Soil	MVQVQSISKAEAVKQQSRQLRGRIARDLADTASPFDKEGY
Ga0318521_101648733	3300031770	Soil	MAAIENVSKAEAIKQQSRQLRGNLARDVADTAAPFDNAGYS
Ga0318521_107815971	3300031770	Soil	MVQVQSISKAEAVKQQSRQLRGHIARDLADTAAPFDKEGY
Ga0318508_12438271	3300031780	Soil	MVQVQSISKAEAVKQQSRQLRGRIARDLADTASPFDKEGYALR
Ga0318523_104674141	3300031798	Soil	MAQIETISKAEAVKQQSRQLRGHLTRDLADASAPFDKEGYALLK
Ga0318568_104016681	3300031819	Soil	MAQIETISKAEAVKQQSRQLRGHIARDLADTTTPFDK
Ga0318499_104252312	3300031832	Soil	MPRPDAVSAAEAVKKWSRQLRGHLARDLADTAQPFD
Ga0306919_112523321	3300031879	Soil	MVQIKSVSKAEAVKQQSRQLRGHISRDLADTSTPFDNE
Ga0318551_107882741	3300031896	Soil	MAQIETISKAEAVKQQSRQLRGHIARDLADTATPFDKEGYS
Ga0306921_101910594	3300031912	Soil	VAQIESISKAEAVKQQSRQLRGHIARDLADTTTPFDKEGYALLKFH
Ga0310912_103846091	3300031941	Soil	MVQVKSVSKAEAVKQQSRQLRGHIARDLADTSTPFDNEGYSLLKF
Ga0310912_114027291	3300031941	Soil	MAQIDAISKPEAVKQQSRQLRGHIARDLADTTTPFD
Ga0310913_103236873	3300031945	Soil	MAAIENVSKAEAIKQQSRQLRGNLARDLGETAAPFDNS
Ga0310910_113014462	3300031946	Soil	MAIIERLSKAEAIKQQSRQLRGHLARDLADATAPFDND
Ga0306926_126725172	3300031954	Soil	MVQINSVSKAEAVKQQSRQLRGHIARDLADTTVPFDNQGYS
Ga0318530_102419931	3300031959	Soil	MAQIETISKAEAVKQQSRQLRGNIARDLADTTTPFDKEGYALLK
Ga0318545_101372991	3300032042	Soil	MAAIENVSKAEAIKQQSRQLRGNLASDLADTATPFD
Ga0318558_102372111	3300032044	Soil	MAAIENVSKAEAIKQQSRQLRGNLACDLAGTATPFDKVGYS
Ga0318533_105463841	3300032059	Soil	VAQVESISKAEAVKQQSRQLRGHIARDLADMTVPFDKEEYSL
Ga0306924_108287761	3300032076	Soil	MAQIETISKAEAVKQQSRQLRGHLTRDLADASAPFD
Ga0318577_105160391	3300032091	Soil	MVQVDSVSKPEALKQQSRQLRGHIARDLADTSVPF
Ga0335081_109245941	3300032892	Soil	VVQLVDKISKAEATKQQSRQLRGHLARDLIDTATPFDGEGYSLLKFH
Ga0335075_112723432	3300032896	Soil	MAQLENISKAEAVKQQSRQLRGHIARDLAEPAHPF
Ga0335084_123594051	3300033004	Soil	MAQVTTLSKAEAVKQQSRQLRGNLSRDLADTATAF
Ga0314872_024469_14_160	3300033810	Peatland	VVQAVEKISKAEATKQQSRHLRGHLARDLADTATPFDGEGYSLLKFHE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091575

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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