Metagenome / Metatranscriptome Family F091573

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091573
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	75 residues
Representative Sequence	RIDVVDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIRRGMEETFDRLAGLIAT
Number of Associated Samples	92
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	98.13 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.701 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (50.467 % of family members)
Environment Ontology (ENVO)	Unclassified (60.748 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (54.206 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.73% β-sheet: 23.76% Coil/Unstructured: 49.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00582	Usp	62.62
PF00072	Response_reg	2.80
PF02417	Chromate_transp	2.80
PF13631	Cytochrom_B_N_2	1.87
PF02729	OTCace_N	0.93
PF00196	GerE	0.93
PF00023	Ank	0.93
PF00850	Hist_deacetyl	0.93
PF13492	GAF_3	0.93
PF02518	HATPase_c	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	2.80
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.70 %
Unclassified	root	N/A	24.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.70 %
Unclassified	root	N/A	24.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.70 %
Unclassified	root	N/A	24.30 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	68.22 %
Unclassified	root	N/A	24.30 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.55 %
Unclassified	root	N/A	24.30 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	54.21 %
Unclassified	root	N/A	24.30 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	38.32 %
Unclassified	root	N/A	24.30 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.80 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	37.38 %
Unclassified	root	N/A	24.30 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.80 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	37.38 %
Unclassified	root	N/A	24.30 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.87 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	37.38 %
Unclassified	root	N/A	24.30 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10004675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12388	Open in IMG/M
3300004470\|Ga0068967_1312540	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300004472\|Ga0068974_1385585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	757	Open in IMG/M
3300004476\|Ga0068966_1435555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300004592\|Ga0068938_1205779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	707	Open in IMG/M
3300004593\|Ga0068946_1180768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300004602\|Ga0068960_1252212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	728	Open in IMG/M
3300004606\|Ga0068962_1289656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	706	Open in IMG/M
3300004611\|Ga0068925_1355639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690	Open in IMG/M
3300004616\|Ga0068930_1393579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300004617\|Ga0068955_1392303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	700	Open in IMG/M
3300005332\|Ga0066388_104239019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	731	Open in IMG/M
3300005921\|Ga0070766_10245007	Not Available	1135	Open in IMG/M
3300006028\|Ga0070717_11690251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300006102\|Ga0075015_100183220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1107	Open in IMG/M
3300006806\|Ga0079220_12043227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	512	Open in IMG/M
3300009521\|Ga0116222_1132140	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1075	Open in IMG/M
3300009522\|Ga0116218_1296000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	725	Open in IMG/M
3300010048\|Ga0126373_12391451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	588	Open in IMG/M
3300010325\|Ga0134064_10094147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	978	Open in IMG/M
3300011085\|Ga0138581_1072647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	761	Open in IMG/M
3300011089\|Ga0138573_1083432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	779	Open in IMG/M
3300011120\|Ga0150983_10215379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	729	Open in IMG/M
3300011271\|Ga0137393_11687404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	522	Open in IMG/M
3300016319\|Ga0182033_11712306	All Organisms → cellular organisms → Bacteria → Terrabacteria group	570	Open in IMG/M
3300016319\|Ga0182033_11861264	Not Available	547	Open in IMG/M
3300016357\|Ga0182032_11473893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300017926\|Ga0187807_1325981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	513	Open in IMG/M
3300017932\|Ga0187814_10323447	Not Available	593	Open in IMG/M
3300017961\|Ga0187778_10124508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1614	Open in IMG/M
3300017966\|Ga0187776_10571942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	783	Open in IMG/M
3300017973\|Ga0187780_10441419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	926	Open in IMG/M
3300017994\|Ga0187822_10062985	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300018058\|Ga0187766_10548241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	784	Open in IMG/M
3300018064\|Ga0187773_10974782	Not Available	554	Open in IMG/M
3300019275\|Ga0187798_1309011	Not Available	609	Open in IMG/M
3300019284\|Ga0187797_1212887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	662	Open in IMG/M
3300021388\|Ga0213875_10300337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	760	Open in IMG/M
3300021860\|Ga0213851_1808415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	713	Open in IMG/M
3300025922\|Ga0207646_11817110	Not Available	521	Open in IMG/M
3300027703\|Ga0207862_1178379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	633	Open in IMG/M
3300031544\|Ga0318534_10886565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300031545\|Ga0318541_10348099	Not Available	828	Open in IMG/M
3300031546\|Ga0318538_10507286	Not Available	654	Open in IMG/M
3300031549\|Ga0318571_10108936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	916	Open in IMG/M
3300031572\|Ga0318515_10421297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	714	Open in IMG/M
3300031640\|Ga0318555_10395900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	748	Open in IMG/M
3300031680\|Ga0318574_10470464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	736	Open in IMG/M
3300031681\|Ga0318572_10404390	Not Available	811	Open in IMG/M
3300031681\|Ga0318572_10484597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	737	Open in IMG/M
3300031682\|Ga0318560_10429002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	716	Open in IMG/M
3300031715\|Ga0307476_11300795	All Organisms → cellular organisms → Bacteria → Terrabacteria group	531	Open in IMG/M
3300031723\|Ga0318493_10095209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1487	Open in IMG/M
3300031723\|Ga0318493_10325719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	832	Open in IMG/M
3300031724\|Ga0318500_10059491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1649	Open in IMG/M
3300031736\|Ga0318501_10081678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1581	Open in IMG/M
3300031744\|Ga0306918_11406725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300031751\|Ga0318494_10178910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1202	Open in IMG/M
3300031764\|Ga0318535_10169620	All Organisms → cellular organisms → Bacteria → Terrabacteria group	975	Open in IMG/M
3300031765\|Ga0318554_10100813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1623	Open in IMG/M
3300031765\|Ga0318554_10199058	Not Available	1140	Open in IMG/M
3300031768\|Ga0318509_10066531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1881	Open in IMG/M
3300031769\|Ga0318526_10055734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1517	Open in IMG/M
3300031769\|Ga0318526_10215756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	785	Open in IMG/M
3300031769\|Ga0318526_10389837	Not Available	569	Open in IMG/M
3300031769\|Ga0318526_10422104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	545	Open in IMG/M
3300031770\|Ga0318521_11051946	Not Available	500	Open in IMG/M
3300031778\|Ga0318498_10168935	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300031781\|Ga0318547_10645768	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300031792\|Ga0318529_10444273	Not Available	603	Open in IMG/M
3300031796\|Ga0318576_10584445	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300031798\|Ga0318523_10350576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	735	Open in IMG/M
3300031798\|Ga0318523_10665255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	512	Open in IMG/M
3300031819\|Ga0318568_10334974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	941	Open in IMG/M
3300031819\|Ga0318568_10696225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	632	Open in IMG/M
3300031832\|Ga0318499_10404329	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300031846\|Ga0318512_10470330	All Organisms → cellular organisms → Bacteria → Terrabacteria group	636	Open in IMG/M
3300031879\|Ga0306919_10838771	Not Available	706	Open in IMG/M
3300031896\|Ga0318551_10157091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1244	Open in IMG/M
3300031897\|Ga0318520_10986274	Not Available	532	Open in IMG/M
3300031910\|Ga0306923_10183277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2392	Open in IMG/M
3300031912\|Ga0306921_10420536	Not Available	1559	Open in IMG/M
3300031912\|Ga0306921_10788331	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300031942\|Ga0310916_11644919	Not Available	520	Open in IMG/M
3300031946\|Ga0310910_11287278	Not Available	565	Open in IMG/M
3300031954\|Ga0306926_11061757	Not Available	960	Open in IMG/M
3300031954\|Ga0306926_12204052	Not Available	613	Open in IMG/M
3300031959\|Ga0318530_10309682	Not Available	653	Open in IMG/M
3300031962\|Ga0307479_11577008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	612	Open in IMG/M
3300032001\|Ga0306922_11351176	Not Available	718	Open in IMG/M
3300032008\|Ga0318562_10217740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1107	Open in IMG/M
3300032008\|Ga0318562_10690651	Not Available	587	Open in IMG/M
3300032009\|Ga0318563_10758385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	520	Open in IMG/M
3300032035\|Ga0310911_10671914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	600	Open in IMG/M
3300032035\|Ga0310911_10683744	Not Available	594	Open in IMG/M
3300032039\|Ga0318559_10609109	Not Available	509	Open in IMG/M
3300032041\|Ga0318549_10052994	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300032052\|Ga0318506_10475075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300032054\|Ga0318570_10149445	Not Available	1044	Open in IMG/M
3300032060\|Ga0318505_10520923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	560	Open in IMG/M
3300032064\|Ga0318510_10264959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	709	Open in IMG/M
3300032064\|Ga0318510_10326925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	643	Open in IMG/M
3300032065\|Ga0318513_10379839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	689	Open in IMG/M
3300033134\|Ga0335073_10358603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1723	Open in IMG/M
3300033290\|Ga0318519_10269367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	990	Open in IMG/M
3300033290\|Ga0318519_10799141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300033805\|Ga0314864_0133913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	623	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.39%
Aquatic	Environmental → Aquatic	4.67%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.39%
Freshwater	Environmental → Aquatic → Freshwater	3.74%
Sediment	Environmental → Aquatic → Sediment	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.41%
Loam	Environmental → Terrestrial → Soil → Loam	5.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	50.47%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	14.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.28%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.80%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.93%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004470	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004472	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004592	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 26 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004593	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 34 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004602	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 52 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004606	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 54 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004611	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 10 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004616	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 15 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004617	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 47 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300011085	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011089	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100046751	3300001356	Peatlands Soil	LDWGAEGDDGYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT*
Ga0068967_13125402	3300004470	Peatlands Soil	DEVHVEGESHGHPYSLDSLLRTDESDRRLDWGAEGDDGYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT*
Ga0068974_13855852	3300004472	Peatlands Soil	LLRTDESDRPLDWGAEGDDGYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT*
Ga0068966_14355552	3300004476	Peatlands Soil	SLDSLLRTDESDRRLDWGAEGDDGYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT*
Ga0068938_12057791	3300004592	Peatlands Soil	EGDDGYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT
Ga0068946_11807682	3300004593	Peatlands Soil	LDSLLRTDESDRRLDWGAEGDDGYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT*
Ga0068960_12522121	3300004602	Peatlands Soil	RRLDWGAEGDDGYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT*
Ga0068962_12896561	3300004606	Peatlands Soil	DDGYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT*
Ga0068925_13556392	3300004611	Peatlands Soil	LLDSLLRTDESDRPLDWGAEGDDGYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT*
Ga0068930_13935791	3300004616	Peatlands Soil	LLRTDESDRRLDWGAEGDDGYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIAT*
Ga0068955_13923031	3300004617	Peatlands Soil	GYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT*
Ga0066388_1042390192	3300005332	Tropical Forest Soil	YSLDSLLRIDESDRRLYWGAEGDSGYRGSLEVAERPSGSEVHLQVAIPDDRLGPYPDSAVTEIRRGIDEAFDRLAGLIAT*
Ga0070766_102450072	3300005921	Soil	VSTRLTGTWHWGAEGDDGYRGSLRVVARQSGSEVHLHVAIPDDRLGSSPDRAAAEIRRGMDEAFDRLAALITT*
Ga0070717_116902512	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	EGDRRLRWGAPADEGYRGWLQVVDRAPGSEVHLHVVVPDDRLGPSPDAAATEIRRGMEEAFDRLADLTVT*
Ga0075015_1001832201	3300006102	Watersheds	YRGWLQVADRPSGSEVHLYVTIPDDRLGPSADAAAVEIRRGMEEAFDRLAGLLGT*
Ga0079220_120432271	3300006806	Agricultural Soil	KKDRGYRGWLRVLDRSPGSEVRLHIAVPDDRLGPSPDAATAEIRRGMEEAFDRLAGLVGS
Ga0116222_11321403	3300009521	Peatlands Soil	ESDRRLDWGAEGDDGYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT*
Ga0116218_12960001	3300009522	Peatlands Soil	EGDDGYRGSLRMAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT
Ga0126373_123914512	3300010048	Tropical Forest Soil	LRIDEGDRHLHWGAEGDDGYRGSLRVTERPSGSEVHLHVAVPDDRLGPSPDSAVAEIRRGMDETFDRLAELIAT*
Ga0134064_100941471	3300010325	Grasslands Soil	DRSLHWGSEQHGGYRGWLQVLDRSPGTEMRLHITVPDDRLGPSPDVAAAEIRRGIEEAFDRLAGLIGG*
Ga0138581_10726472	3300011085	Peatlands Soil	DSLLRTDESDRPLDWGAEGDDGYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT*
Ga0138573_10834322	3300011089	Peatlands Soil	GHPYSLDSLLRTDESDRRLDWGAEGDDGYRGSLRIAERPSGSEVHLHVAIPDDRLGPSPDHAAAEIRRGMDEAFDRLASLIVT*
Ga0150983_102153792	3300011120	Forest Soil	DRELHVDEGDRSLHWGAEQDGGYRGWLRVLDRSPGSEVRLHIAVPDDRLGPSPDAATAEIRRGMEEAFDRLAGLIGS*
Ga0137393_116874042	3300011271	Vadose Zone Soil	GAEEDDGYRGWLQVTDQPPGSQVRIHVAIPDGRLGPHPDAAAAEISRGLEEAFDRLAGLAGT*
Ga0182033_117123061	3300016319	Soil	IDEGDRRLDWGAEGDDDYRGALRVAERPSGSEVHLHVAVPEDRLGPSPDDAVAEIRRGMEEAFDRLARLIAT
Ga0182033_118612641	3300016319	Soil	GHPYSLDSLLRIDAGDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIQRGMEETFDRLAGLVAT
Ga0182032_114738932	3300016357	Soil	HWGAERDDGYRGSLQIVERPPGSEARLHVAIPDDRLGSSPDSAVTEIQRGMEEAFDRLAALIAT
Ga0187807_13259812	3300017926	Freshwater Sediment	LLRIDESDRRLEWGAEDDDGYRGSLRVAERPSGSEVHLHVTIPDDRLGPSPDTAVAEIRRGVEETFDRLSALSAS
Ga0187814_103234472	3300017932	Freshwater Sediment	EAEVHLEGESHGHQYSLESLLDIDESERRLQWGTAGDEGYRGWLRVADRPSGSEVHIHVAIPDARMGTSADTAAAELRQGMEDTFDRLAGLMTA
Ga0187778_101245083	3300017961	Tropical Peatland	GDRRLRWGAEGDDGYRGSLRVVARPPGSEVHLHVAIPDGHLGWTPDSDIAEIRRGIGEACDRLAGLIAPRTRRT
Ga0187776_105719422	3300017966	Tropical Peatland	MLCVDQGDRRLYWGAAADEGYRGWLQVTDQPPGSEVRIHVVVPDDRLGQSADAATTEIRRGLEEAFDRLVGLVRT
Ga0187780_104414193	3300017973	Tropical Peatland	GYRGSLRVVARPAGSEVHLRVTVPDDHLGPSPDSDIAEIRRGIGEAFDRLAGLIAPRTRR
Ga0187822_100629852	3300017994	Freshwater Sediment	VEGESHGHPYSLDSLLRIDESDRRLDWGAEGDDGYRGSLRVAERPSGSEVHLRVAIPDDRLGPSPDSAVTEIRRGIDEAFDRLAGLIAT
Ga0187766_105482411	3300018058	Tropical Peatland	RGSLRVTERPPGSEVHLHVAVPDDRLGPSPDSAAAEIRLGIEEAFDRLAGLIATLTAVRRGPPAG
Ga0187773_109747822	3300018064	Tropical Peatland	VEGESHGHRYSLDSLLRIDEGDRHLHWGAEGDDGYRGSLKVAERPSGSEVHLHVAIPDDRLGPSPDSGTAEIRRGIDEAFDRLARLIAT
Ga0187798_13090111	3300019275	Peatland	EGDDGYRGSLQVTERPPGSEVHLHVAVPDDRLSPSPDSAAAEIRRGMEEAFDRLAGLIAT
Ga0187797_12128871	3300019284	Peatland	LQWGTEGDDGYRGSLQVTERPPGSEVHLHVAVPDDRLSPSPDSAAAEIRRGMEEAFDRLAGLIAT
Ga0213875_103003372	3300021388	Plant Roots	ELHVDEGARSMHWGADDREGYRGWLRVVDRPSGSEVQIHVAVPDDRLGPSPDAAAAEIRRGIEEAFDRLAGLIGS
Ga0213851_18084151	3300021860	Watersheds	HGHPYSLDSMLRVDERDRRLQWGAAGGDGYRGWLHVANRPSGSEVHLYVTIPDDRLGPSADAAAGEIRRGMEEAFDRLAGLLGT
Ga0207646_118171102	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	QPSGKEEVHVEGESHGHRYSLDSLLRVDESDRCLHWGAEGDDGYRGSLRVAERPSGSEVYLNVAIPDDRLGPSPDSAVVEIQRGIEEAFDRLAGLTAT
Ga0207862_11783791	3300027703	Tropical Forest Soil	RIDEGERRLYWGAEGDDGYRGSLRVAERPSASEVHLHAAIPDDRLGSSPDSAAAEIRRGIEEAFDRLAGLIAP
Ga0318534_108865651	3300031544	Soil	AEGDDRYRGSLRVTEQPPGSQVHLHVAIPEDRLGSSPDDAAAEIRRGMEEAFDRLAGLIA
Ga0318541_103480992	3300031545	Soil	VVDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIRRGMEETFDRLAGLIAT
Ga0318538_105072861	3300031546	Soil	LHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPASAAAEIRRGMEETFDRLAGLIAT
Ga0318571_101089362	3300031549	Soil	RLHWGAEGDDGYRGSLQIVERPPGSEARLHVAIPDDRLGSSPDSAVAEIQRGMEEAFDRLAALIAT
Ga0318515_104212972	3300031572	Soil	GHPYSLDSTLRVEAGDRRLHWGSDADDGYSGWLQVLGRPPGSEVRLHVAVPDGRLGPSADAAAAEIRRGIEEAFDRLAGLIER
Ga0318555_103959001	3300031640	Soil	SLDSLLHIDEGGRHLHWGAEGDDGYRGSLWVTERPSGSEVHLHVAVPDDRLGPSPDSAVAEIRRGMDETFDRLAELIAT
Ga0318574_104704642	3300031680	Soil	SLLRIDESDRRLDWGAEGDDDYRGSLRVAERPSGSEVHLHVAVPDDRLGPSPDDAVTEIRRGMEEAFDRLAGLIAT
Ga0318572_104043901	3300031681	Soil	VHVEGESHGHPYSLDSLLRIDAGDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIQRGMEETFDRLAGLVAT
Ga0318572_104845971	3300031681	Soil	GDDRYRGSLRVAERPSGSEVHLHVAVPDDRLGSSPDGAAAEIRRGMEEAFDRLARLIAT
Ga0318560_104290022	3300031682	Soil	RGSLRVTEQPPGSQVHLHVAIPEDRLGSSPDDAAAEIRRGMEEAFDRLAGLIAT
Ga0307476_113007951	3300031715	Hardwood Forest Soil	GDDGYRGSLRVVARPSGSEVHLHVAVPDDRLGPSPDRAAAEILRGMDEAFDRLAGLIAT
Ga0318493_100952093	3300031723	Soil	LYWGAAADEGYRGWLQVAGRPSGSEVRIHVAVPDDRLGPSVDAAAAELRRGLEEAFDRLAGLIGT
Ga0318493_103257192	3300031723	Soil	VHVEGESHGHRYSLDSLLRVDEGDGRLDWGTEGDDGYRGSLRVAERPSGSEVHLHLAVPDDRLGPSPDDAVAEIRRGIEEAFDRLAGLVAT
Ga0318500_100594911	3300031724	Soil	VEGESHGHRYSLDSLLRIDEGDRRLDWGAEGDDRYYGSLRVAERPSGSEVHLHVAVPDDRLGSSPDGAAAEIRRGMEEAFDRLARLIAT
Ga0318501_100816782	3300031736	Soil	VEGESHGHPYSLDSLLRIDVVDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIRRGMEETFDRLAGLIAT
Ga0306918_114067252	3300031744	Soil	GERRLHWGAAADEGYRGWLQVVDRPPGSEARIHVAVPDDRLGPSADAATAEIHRGMEEAFDRLAGLAGG
Ga0318494_101789101	3300031751	Soil	PYSLDSTLRVEAGDRRLHWGSDADDGYSGWLQVLGRPPGSEVRLHVAVPDGRLGPSADAAAAEIRRGIEEAFDRLAGLIER
Ga0318535_101696201	3300031764	Soil	SLDSLLRIDEGDRQLHWGAEGDDGYRGSLRVVAQPPGSEVHLHVAIPDDRLGPSPDSAAAEIRRGIDEAFDRLAGLIAT
Ga0318554_101008132	3300031765	Soil	SHGHPYSLDSLLRIDAGDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIQRGMEETFDRLAGLVAT
Ga0318554_101990581	3300031765	Soil	SLDSLLRIDEGDRRLDWGAEGDDRYRGSLRVTEQPPGSQVHLHVAIPEDRLGSSPDDAAAEIRRGMEEAFDRLAGLIAT
Ga0318509_100665314	3300031768	Soil	GAERDDGYRGSLQIVERPPGSEARLHVAIPDDRLGSSPDSAVAEIQRGMEEAFDRLAALIAT
Ga0318526_100557341	3300031769	Soil	HWGGDGDDGYRGWLEVTDQPPGSQVRIHVAIPDGRLGPHPDAAAEEIGRGLEEAFDRLAGLVET
Ga0318526_102157561	3300031769	Soil	LRIDKSDRRLYWGAEGDDGYRGSLEVAERPSGSEVHLQVAIPDDRLGPHPDSAVTEIRRGIDEAFDRLAGLIAT
Ga0318526_103898371	3300031769	Soil	SLDSLLRIDVVDRRLDWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPASAAAEIRRGMEETFDRLAGLIAT
Ga0318526_104221042	3300031769	Soil	YSLDSMLRIDEGDRHLHWGAEDDDGYRGSLRVTEQPPGSEVHLHVVIPDDRLGSSPDSAAAEIRRGIDETFDRLAGLIAT
Ga0318521_110519462	3300031770	Soil	HPYSLDSLLRIDAGDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIQRGMEETFDRLAGLVAT
Ga0318498_101689352	3300031778	Soil	EGESHGHRYSLDSLLRIDEGDRRLDWGAEGDDRYRGSLRVAERPSGSEVHLHVAVPDDRLGSSPDGAAEIRRGMEEAFDRLARLIAT
Ga0318547_106457682	3300031781	Soil	AMRLAQPHGQEEVHVEGESHGHRYSLDSLLRVDEGDGRLDWGTEGDDGYRGSLRVAERPSGSEVHLHVAVPDDRLGPSPDDAVAEIRRGIEEAFDRLAGLVAT
Ga0318529_104442732	3300031792	Soil	GESHGHPYSLDSLLRIDVVDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIRRGMEETFDRLAGLIAT
Ga0318576_105844452	3300031796	Soil	EEVHVEGESHGHRYSLDSLLRIDKSDRRLYWGAEGDDGYRGSLEVAERPSGSEVHLQVAIPDDRLGPHPDSAVTEIRRGIDEAFDRLAGLIAT
Ga0318523_103505762	3300031798	Soil	YYGSLRVAERPSGSEVHLHVAVPDDRLGSSPDGAAAEIRRGMEEAFDRLARLIAT
Ga0318523_106652551	3300031798	Soil	RLHWGSDADDGYSGWLQVLGRPPGSEVRLHVAVPDGRLGPSADAAAAEIRRGIEEAFDRLAGLIER
Ga0318568_103349742	3300031819	Soil	LDSLLRIDEGDRRLDWGAEGDDRYRGSLRVAERPSGSEVHLHVAVPDDRLGSSPDGAAEIRRGMEEAFDRLARLIAT
Ga0318568_106962252	3300031819	Soil	YSLDSLLRIDEGDRRLDWGAEGDDDYRGSLRVAERPSGSEVHLHVAVPDDRLGPSPDDAVAEIRRGMEEAFDRLAGLIAT
Ga0318499_104043291	3300031832	Soil	HGQEEVHVEGESHGHRYSLDSLLRVDEGDGRLDWGTEGDDGYRGSLRVAERPSGSEVHLHVAVPDDRLGPSPDDAVAEIRRGIEEAFDRLAGLVAT
Ga0318512_104703301	3300031846	Soil	AEGDDRYRGSLRVAERPSGSEVHLHVAVPDDRLGSSPDGAAAEIRRGMEEAFDRLARLIA
Ga0306919_108387711	3300031879	Soil	DGYRGSLRVVAQPPGSEVHLHVAIPDDRLGPSPDSAAAEIRRGIDEAFDRLAGLIAT
Ga0318551_101570911	3300031896	Soil	GESHGHPYSLDSLLRIDAGDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIQRGMEETFDRLAGLVAT
Ga0318520_109862741	3300031897	Soil	YSLDSLLRIDEGDRQLHWGAEGDDGYRGSLRVVAQPPGSEVHLHVAIPDDRLGPSPDSAAAEIRRGIDEAFDRLAGLIAT
Ga0306923_101832775	3300031910	Soil	ESHGHRYSLDSLLRIDEGDRQLHWGAEGDDGYRGSLRVVAQPPGSEVHLHVAIPDDRLGPSPDSAAAEIRRGIDEAFDRLAGLIAT
Ga0306921_104205361	3300031912	Soil	RLSWGAEGDEGYRGWLRVQERPPGAEVHIHVTIPDDRIGPQPEAAAAELRRGVKEAFDRLAALT
Ga0306921_107883312	3300031912	Soil	VEGESHGHRYSLDSLLRIDEGDRRLDWGAEGDDRYRGSLRVAERPSGSEVHLHVAVPDDRLGSSPDGAAAEIRRGMEEAFDRLARLIAT
Ga0310916_116449191	3300031942	Soil	GHPYSLDSLLRIDVVDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIRRGMEETFDRLAGLIAT
Ga0310910_112872781	3300031946	Soil	GDRRLSWGAEGDEGYRGWLRVQERPPGAEVHIHVTIPDDRIGPQPEAAAAELRRGVKEAFDRLAALT
Ga0306926_110617572	3300031954	Soil	LDSLLRIDAGDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIQRGMEETFDRLAGLVAT
Ga0306926_122040521	3300031954	Soil	QLHWGAEGDDGYRGSLRVVAQPPGSEVHLHVAIPDDRLGPSPDSAAAEIRRGIDEAFDRLAGLIAT
Ga0318530_103096822	3300031959	Soil	GHPYSLDSLLRIDVVDRRLDWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIRRGMEETFDRLAGLIAT
Ga0307479_115770081	3300031962	Hardwood Forest Soil	SLDSELRIDEGDRRLDWGAKGDYGYRGSLQVAERPSGSEAHLHVVVPDDRLGPSPDSAAAEIRRGMEETFDRLAGLIAT
Ga0306922_113511762	3300032001	Soil	RIDVVDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIRRGMEETFDRLAGLIAT
Ga0318562_102177402	3300032008	Soil	SLDSLLRIDESERRLHWGAEGDDGYRGSLQIAERPSGSEARLHVAIPDDRLGSSPDSTAAEIQRGMEEAFDRLAALIAT
Ga0318562_106906511	3300032008	Soil	GAEGDDGYRGSLRVVAQPPGSEVHLHVAIPDDRLGPSPDSAAAEIRRGIDEAFDRLAGLIAT
Ga0318563_107583852	3300032009	Soil	ADDGYSGWLQVLGRPPGSEVRLHVAVPDGRLGPSADAAAAEIRRGIEEAFDRLAGLIER
Ga0310911_106719142	3300032035	Soil	PGERRLHWGAAADEGYRGWLQVVDRPPGSEARIHVAVPDDRLGPSADAATAEIRRGMEEAFDRLAGLAGG
Ga0310911_106837442	3300032035	Soil	EGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIRRGMEETFDRLAGLIAT
Ga0318559_106091091	3300032039	Soil	EEVHVEGESHGHPYSLDSLLRIDAGDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIQRGMEETFDRLAGLVAT
Ga0318549_100529941	3300032041	Soil	EEVHVEGESHGHRYSLDSLLRIDESDRRLHWGAERDDGYRGSLQIVERPPGSEARLHVAIPDDRLGSSPDSAVTEIQRGMEEAFDRLAALIAT
Ga0318506_104750752	3300032052	Soil	SHGHRYSLDSLLRIDEGDRRLDWGAEGDDRYRGSLRVTEQPPGSQVHLHVAIPEDRLGSSPDDAAAEIRRGMEEAFDRLAGLIAT
Ga0318570_101494452	3300032054	Soil	PYSLDSLLRIDAGDRRLHWGAEGDDGYRGSLRVTGRPSGSEVHLHVAVPDDRLGPSPDSAAAEIQRGMEETFDRLAGLVAT
Ga0318505_105209231	3300032060	Soil	RRLYWGAEGDDGYRGSLEVAERPSGSEVHLQVAIPDDRLGPHPDSAVTEIRRGIDEAFDRLAGLIAT
Ga0318510_102649591	3300032064	Soil	YSLDSLLRIDKSDRRLYWGAEGDDGYRGSLEVAERPSGSEVHLQVAIPDDRLGPHPDSAVTEIRRGIDEAFDRLAGLIAT
Ga0318510_103269252	3300032064	Soil	SLDSQLRIDEGDRSLHWGAAEDESYRGWLRVEDRSPGSELHIHVTVPEGRLGPSPGAATEEIQRGMEETFDRLASLIVS
Ga0318513_103798392	3300032065	Soil	PYSLDSMLRADPGERRLHWGAAADEGYRGWLEVVDRPPGSEARIHVAVPDDRLGPSADAATAEIRRGMEEAFDRLAGLAGG
Ga0335073_103586032	3300033134	Soil	VGRLEGESHGHPYSLDRELHVDEGDRSLHWGAEQDRGYRGWLRVLDRSPGAEVRLHIAVPDDRLGPSRDAAAAEIRRGIEEAFDRLAGLIGS
Ga0318519_102693672	3300033290	Soil	SMLRADPGERRLHWGAAADEGYRGWLQVVDRPPGSEARIHVAVPDDRLGPSADAATAEIRRGMEEAFDRLAGLAGG
Ga0318519_107991412	3300033290	Soil	EVHVEGESHGHRYSLDSLLRIDESERRLHWGAEGDDGYRGSLQIAERPSGSEARLHVAIPDDRLGSSPDSTAAEIQRGMEEAFDRLAALIAT
Ga0314864_0133913_433_621	3300033805	Peatland	GAEGDDGYRGSLWVVARPPGSEVHLQVAVPDDRLGPSPDSAAAEIGRGIDEAFDRLAGLIAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091573

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences