Metagenome / Metatranscriptome Family F091570

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091570
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	107 residues
Representative Sequence	QVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDAAGINIEAGAVGVRHAGTISGTATIASGENIGLFGEVTFTGTVTVAGEMVVV
Number of Associated Samples	87
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.93 %
% of genes from short scaffolds (< 2000 bps)	0.93 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (99.065 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (25.234 % of family members)
Environment Ontology (ENVO)	Unclassified (59.813 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.393 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140 1DelMOSpr2010_100585764 2JGI20158J14315_100235131 3GOS2266_10342892 4GOS2240_10510334 5GOS2243_10249393 6GOS2246_101719933 7Ga0073579_15229791 8Ga0066856_101730393 9Ga0078893_110411261 10Ga0070754_103507942 11Ga0070746_102484601 12Ga0102954_11960651 13Ga0105744_11881221 14Ga0102963_12996321 15Ga0115551_11436552 16Ga0115551_11905413 17Ga0114932_108173152 18Ga0115011_103862681 19Ga0115012_102955001 20Ga0115012_111215541 21Ga0098049_11257821 22Ga0129352_107453581 23Ga0160423_101232451 24Ga0160423_102350202 25Ga0160423_108857112 26Ga0163110_103446224 27Ga0163110_106883872 28Ga0182083_13847181 29Ga0181391_10120065 30Ga0181412_10234524 31Ga0181412_10245321 32Ga0181412_10245981 33Ga0181390_10227964 34Ga0181390_10329921 35Ga0181390_10933441 36Ga0181390_11715982 37Ga0181401_10946962 38Ga0187218_10058019 39Ga0181433_10254182 40Ga0181389_10149901 41Ga0181389_10349281 42Ga0181389_10465151 43Ga0181393_10115825 44Ga0181392_10107151 45Ga0187219_10165166 46Ga0181400_11670091 47Ga0181411_11299861 48Ga0181420_11334431 49Ga0181409_11244701 50Ga0187220_10067131 51Ga0187220_10502413 52Ga0187220_12023821 53Ga0181395_10472021 54Ga0181379_10471811 55Ga0181577_1001057713 56Ga0181577_109083821 57Ga0181580_104377251 58Ga0181587_107143321 59Ga0181563_103374981 60Ga0181593_102680691 61Ga0181568_101420334 62Ga0182081_14240112 63Ga0211591_10403032 64Ga0211483_101340831 65Ga0211485_10503261 66Ga0211593_10044951 67Ga0211594_10767921 68Ga0211592_11325091 69Ga0211604_10510612 70Ga0211477_100760132 71Ga0211647_102736821 72Ga0211527_102171991 73Ga0211652_100512613 74Ga0211652_101832171 75Ga0211497_101064482 76Ga0211636_100533992 77Ga0211499_102571001 78Ga0211472_101286911 79Ga0211644_1000243517 80Ga0211528_101455421 81Ga0211622_104098542 82Ga0211539_101132172 83Ga0211695_102816061 84Ga0211564_101788004 85Ga0211548_103858361 86Ga0211694_101211462 87Ga0211694_104086631 88Ga0213858_102162842 89Ga0213864_102434641 90Ga0222718_100452157 91Ga0222718_103344821 92Ga0222716_103215982 93Ga0222716_105387082 94Ga0222719_108174301 95Ga0255773_102014541 96Ga0228638_11507772 97Ga0208666_11230411 98Ga0209336_100775272 99Ga0209645_11503082 100Ga0209305_10846432 101Ga0208543_11237962 102Ga0209951_11010032 103Ga0209932_11193842 104Ga0209929_10403481 105Ga0257110_101043810 106Ga0183748_100262218 107Ga0183748_10938353
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140 1DelMOSpr2010_100585764 2GOS2266_10342892 3GOS2240_10510334 4GOS2243_10249393 5Ga0073579_15229791 6Ga0078893_110411261 7Ga0070754_103507942 8Ga0102963_12996321 9Ga0163110_103446224 10Ga0187220_12023821 11Ga0222716_105387082
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140 1DelMOSpr2010_100585764 2GOS2266_10342892 3GOS2240_10510334 4GOS2243_10249393 5Ga0073579_15229791 6Ga0078893_110411261 7Ga0070754_103507942 8Ga0102963_12996321 9Ga0163110_103446224 10Ga0187220_12023821 11Ga0222716_105387082
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 62.96% Coil/Unstructured: 37.04%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01510	Amidase_2	1.87
PF00149	Metallophos	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	0.93 %
Unclassified	root	N/A	99.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.07 %
Viruses	superkingdom	All Organisms → Viruses	0.93 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %
Unclassified	root	N/A	99.07 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300020379\|Ga0211652_10051261	All Organisms → Viruses → Predicted Viral	1238	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	95.33%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.67%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	8.41%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	13.08%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.87%
Oceanic	Environmental → Aquatic → Marine → Oceanic	14.02%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.80%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	4.67%
Strait	Environmental → Aquatic → Marine → Strait	24.30%
Unclassified	Environmental → Aquatic → Marine → Unclassified	29.91%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.93%

Habitat	Taxonomy	Distribution
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.67%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	9.35%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	29.91%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	24.30%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	9.35%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	8.41%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	4.67%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.74%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.93%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.67%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.93%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	25.23%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	7.48%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	3.74%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.87%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.93%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.93%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.80%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.93%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	3.74%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	9.35%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	24.30%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.80%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	4.67%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.93%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001355	Pelagic Microbial community sample from North Sea - COGITO 998_met_08	Environmental	Open in IMG/M
3300001956	Marine microbial communities from Rangirora Atoll, Polynesia Archipelagos - GS051	Environmental	Open in IMG/M
3300001961	Marine microbial communities from Dirty Rock, Cocos Island, Costa Rica - GS025	Environmental	Open in IMG/M
3300001965	Marine microbial communities from Coastal Floreana, Equador - GS028	Environmental	Open in IMG/M
3300001974	Marine microbial communities from Upwelling, Fernandina Island, Equador - GS031	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005404	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100585764	3300000116	Marine	IISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAVGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVEGEMVVV*
JGI20158J14315_100235131	3300001355	Pelagic Marine	ADGNTNIEIGATTTDEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVEGEMVVV*
GOS2266_10342892	3300001956	Marine	GSDSSNTASSWTDIGGGTILADADGNTNIEIGATTADEIDVDIAGTKVATVDAVGINIEAGAVGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV*
GOS2240_10510334	3300001961	Marine	KQGMIIFNETDGKMQVYTGSDASNTSSNWTDIGGGTILADTDGNTNIEIGATTTDEIDVDIAGTKKFTIDGIGLYSEAGALGYSNTDSISVTATIPANRNVGLFGDVTFTGTVTVAGTMTVV*
GOS2243_10249393	3300001965	Marine	SLSAGSVKQGMIIFNETDGKMQVYTGSDSSNTASSWTDIGGGTILADADGNTNIEIGATTTDEIDVDIAGTKIATFDAAGLAIETGAVGVRHNSTVAATAEIASGETLGLFGEVTFTGTVTIAGEMVIV*
GOS2246_101719933	3300001974	Marine	NALTAGSVKQGMIIFIETDGKMQVYTGSDASNTSSSWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATFDAAGLAIETGAVGVRHNSTVAATAEIASGETLGLFGEVTFTGTVTIAGEMVIV*
Ga0073579_15229791	3300005239	Marine	LATADVFAGLIIYNETDSKMQVYTGTDNTNNSGDWTDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAVGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVEGEMVVV*
Ga0066856_101730393	3300005404	Marine	VYTGSDASNTSSSWTDIGGGTIIADTDGNTNIEIAATTADEIDVDIAGTKMATLDGAGINIEAGAVGVRHAGTISATQTIAAGENIGLFGTVTFTGTVTVAGEMVVV*
Ga0078893_110411261	3300005837	Marine Surface Water	ALTGSSVKQGMIIFNETDGKMQVYTGSDASNTSSNWAIIGGGPLLSDSDGNTNIQIGATTTDEIDVDIAGTKIVTLDAAGIHIEGESVGLRNDSTISATATIASGENLGLFGDVTFTGTITVAGTMTVV*
Ga0070754_103507942	3300006810	Aqueous	NSGDWTDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKKFTIDDVGIFSEAGALGYSNTNSISATATIPSDRNVGLFGTVAFTGVVTIEGQLDVL*
Ga0070746_102484601	3300006919	Aqueous	NSGDWTDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVEGEMVVV*
Ga0102954_11960651	3300007778	Water	KMQVYTGTDNTNNSGDWTDIGGGSIISDADGNTNIEIGATTADEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVAGEMVVV*
Ga0105744_11881221	3300007863	Estuary Water	VYTGTDNTNNSGDWTDIGGGSIISDADGNTNIEIGATTADEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVAGEMVVV*
Ga0102963_12996321	3300009001	Pond Water	NETDSKMQVYTGTDNTNNSGDWTDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAVGIGIETDGVGFSNSNTIAATATIPADKNLGLFGTVSFTGVLTIEGQLDVL*
Ga0115551_11436552	3300009193	Pelagic Marine	TDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAVGLNIEAGAIGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTIEGEMVVV*
Ga0115551_11905413	3300009193	Pelagic Marine	TDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVEGEMVVV*
Ga0114932_108173152	3300009481	Deep Subsurface	SSWTDIGGGTILADADGNTNIEIGATTADEIDVDIAGTKIATFDAAGLAIETGAVGVRHNSTVAATATIASGETLGLFGEVTFTGIVTVAGEMVIV*
Ga0115011_103862681	3300009593	Marine	VYTGSDASNTSSSWTDIGGGTILADADGNTNIEIGATATDEIDVDIAGTKIATFDAAGLAIETGAVGVRHNSTIAATAEIASGETLGLFGEVTFTGTVTVTGEMVVV*
Ga0115012_102955001	3300009790	Marine	MIIFNETDGKMQVYTGSDASNTSSSWTDIGGGTILADTDGNTNIEIAATTADEIDVDIAGTKMATLDAAGINIEAGAVGVRHAGTITATQTIAAGENIGLFGTVTFTGTVTVAGEMVVV*
Ga0115012_111215541	3300009790	Marine	MQVYTGSDASNTSSSWTDIGGGTILADADGNTNIEIGATTADEIDVDIAGTKIATFDAAGLAIETGAVGVRHNSTVAATATIASGETLGLFGDVTFTGTVTIAGEMVVV*
Ga0098049_11257821	3300010149	Marine	ERNAVTAGSVKQGMIIFNETDGKMQVYTGSDSSNTSSSWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDAVGINIEAGAIGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV*
Ga0129352_107453581	3300012528	Aqueous	IISDADGNTNIEIGATTTDEIDVDIAGTKKFTIDDVGIFSEAGALGYSNTNSISATATIPSDRNVGLFGTVAFTGVVTIEGQLDVL*
Ga0160423_101232451	3300012920	Surface Seawater	GKMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTADEIDVDIAGTKVATVDAVGINIEAGAVGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV*
Ga0160423_102350202	3300012920	Surface Seawater	GKMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTTDEIDVDIAGTKIATFDGAGINVEAGAVGVRHAGTITGTATIEAGENIGLFGDVTFTGTVTVAGEMVVV*
Ga0160423_108857112	3300012920	Surface Seawater	SNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATFDGAGINVEAGAVGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV*
Ga0163110_103446224	3300012928	Surface Seawater	SSWTDIGGGTIIADADGNTNIEIGATTSDKIDVDIAGTKIATFDGAGLVIETGGVGVRHNSSIGSTSTIASGETLGLFGTVTFTGVVTVAGEMVVV*
Ga0163110_106883872	3300012928	Surface Seawater	ETDGKMQVYTGSDASNTSSSWTDIGGGTILADADGNTNIEIGATTADEIDVDIAGTKVATVDAVGINIEAGAVGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV*
Ga0182083_13847181	3300016743	Salt Marsh	IYNETDSKMQVYTGTDNTNNSGDWTDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVEGEMVVV
Ga0181391_10120065	3300017713	Seawater	GKMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDKIDVDIAGTKIATFDGAGINVEAGAVGIRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0181412_10234524	3300017714	Seawater	ADSDGNTNIEIGATTSDEIDVDIAGTKIATLDAVGINIEAGAIGVRHAGTITGTATIAAGENIGLFGEVTFTGTVTVEGEMVVV
Ga0181412_10245321	3300017714	Seawater	IFNETDGKMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDSVGINIEAGAIGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0181412_10245981	3300017714	Seawater	IFNETDGKMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDGAGINVEAGAVGVRHAGTISATQTIAAGENIGLFGEVTFTGTVTVAGEMVVV
Ga0181390_10227964	3300017719	Seawater	QVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDKIDVDIAGTKIATFDGAGINVEAGAVGIRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0181390_10329921	3300017719	Seawater	MIIFNETDGKMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDAAGINIEAGAVGVRHAGTISGTATIASGENIGLFGEVTFTGTVTVAGEMVVV
Ga0181390_10933441	3300017719	Seawater	GKMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDGAGINVEAGAVGVRHAGTISATQTIAAGENIGLFGEVTFTGTVTVAGEMVVV
Ga0181390_11715982	3300017719	Seawater	QVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDSVGINIEAGAIGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0181401_10946962	3300017727	Seawater	GSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDGAGINVEAGAVGVRHAGTISATQTIAAGENIGLFGEVTFTGTVTVAGEMVVV
Ga0187218_10058019	3300017737	Seawater	QVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDAAGINIEAGAVGVRHAGTISGTATIASGENIGLFGEVTFTGTVTVAGEMVVV
Ga0181433_10254182	3300017739	Seawater	ALNSSVVKQGMIIFNETDGKMQVYTGSDSSNTSSSWTDIGGGTILADADGNTNIEIGATTADEIDVDIAGTKIATFDAAGLAIETGAVGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0181389_10149901	3300017746	Seawater	VTASTVKQGMIIFNETDGKMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDKIDVDIAGTKIATFDGAGINVEAGAVGIRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0181389_10349281	3300017746	Seawater	SNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDGAGINVEAGAVGVRHAGTISATQTIAAGENIGLFGEVTFTGTVTVAGEMVVV
Ga0181389_10465151	3300017746	Seawater	SNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDAVGINIEAGAIGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0181393_10115825	3300017748	Seawater	ETDGKMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDKIDVDIAGTKIATFDGAGINVEAGAVGIRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0181392_10107151	3300017749	Seawater	NWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDAAGINIEAGAVGVRHAGTISGTATIASGENIGLFGEVTFTGTVTVAGEMVVV
Ga0187219_10165166	3300017751	Seawater	GGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDAVGINIEAGAIGVRHAGTITGTATIAAGENIGLFGEVTFTGTVTVEGEMVVV
Ga0181400_11670091	3300017752	Seawater	KQGMIIFNETDGKMQVYTGSDSSNTSSSWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDSVGINIEAGAIGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0181411_11299861	3300017755	Seawater	KMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDAAGINIEAGAVGVRHAGTISGTATIASGENIGLFGEVTFTGTVTVAGEMVVV
Ga0181420_11334431	3300017757	Seawater	KMQVYTGSDASNTSSNWTDIGGGTILADSDGNTNIEIGATTSDEIDVDIAGTKIATLDAAGINIEAGAVGVRHAGTISGTATIASGENIGLFGEVTFTGTVTVAGEMVVV
Ga0181409_11244701	3300017758	Seawater	GNTNIEIGATTSDEIDVDIAGTKIATLDAAGINIEAGAVGVRHAGTISGTATIASGENIGLFGEVTFTGTVTVAGEMVVV
Ga0187220_10067131	3300017768	Seawater	FTTTERNAVTASTVKQGMIIFNETDGKMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDGAGINVEAGAVGVRHAGTISATQTIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0187220_10502413	3300017768	Seawater	MIIFNETDGKMQVYTGSDGSNTASSWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATFDAAGLAIETGAVGVRHNSTVAATAEIASGETLGLFGEVTFTGTVTIAGEMV
Ga0187220_12023821	3300017768	Seawater	FTTTERNAVTASTVKQGMIIFNETDGKMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDSVGINIEAGAIGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0181395_10472021	3300017779	Seawater	DGNTNIEIGATTSDEIDVDIAGTKIATLDGAGINVEAGAVGVRHAGTISATQTIAAGENIGLFGEVTFTGTVTVAGEMVVV
Ga0181379_10471811	3300017783	Seawater	FTTTERNAVTASTVKQGMIIFNETDGKMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDGAGINVEAGAVGVRHAGTISATQTIAAGENIGLFGEVTFTGTVTVAGEMVVV
Ga0181577_1001057713	3300017951	Salt Marsh	TADVFAGLIIYNETDSKMQVYTGTDNTNNSGDWTDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAVGIGIETDGIGFSNSNTISATATIPSDRNVGLFGTVAFTGVLTIEGQMDVL
Ga0181577_109083821	3300017951	Salt Marsh	IGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAAGLAIETGAVGVRHNSTVAATAEIASGETLGLFGEVTFTGTVTVAGEMVVV
Ga0181580_104377251	3300017956	Salt Marsh	TNNSGDWTDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGLKVATFDAVGIGIETDGVGFSNSNTIAATATIPSDRNVGLFGTVAFTGVVTIEGQLDVL
Ga0181587_107143321	3300017968	Salt Marsh	IGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKKFTIDDVGIFSEAGALGYSNTNSISATATIPSDRNVGLFGTVAFTGVVTIEGQLDVL
Ga0181563_103374981	3300018420	Salt Marsh	MQVYTGTDNTNNSGDWTDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAAGLAIETGAVGVRHNSTVAATAEIASGETIGLFGEVTFTGTVTVAGEMVVV
Ga0181593_102680691	3300018423	Salt Marsh	IISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAVGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVEGEMVVV
Ga0181568_101420334	3300018428	Salt Marsh	DIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAVGIGIETDGIGFSNSNTISATATIPSDRNVGLFGTVAFTGVLTIEGQMDVL
Ga0182081_14240112	3300019277	Salt Marsh	SIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVEGEMVVV
Ga0211591_10403032	3300020280	Marine	GSNTTSSWTDIGGGTILADADGNTNIEIGATTSDKIDVDIAGTKVATFDGAGLVIETGGVGVRHNSSIGSTSTIASGETVGLFGTVTFTGVVTVAGEMVVV
Ga0211483_101340831	3300020281	Marine	TVPRFSTTERNNLTAGSVKQGMIIFNETDGKMQVYTGSDGSNTTSSWTDIGGGTIIADADGNTNIEIGATTSDKIDVDIAGTKIATFDGAGLVIETGGVGVRHNSSIGSTSTIASGETLGLFGTVTFTGVVTVAGEMVVV
Ga0211485_10503261	3300020313	Marine	NLSSSAVKQGMIIFNETDGKMQVYTGSDGSNTSSSWTDIGGGTIIADADGNTNIEIGATTSDQIDVDIAGTKVATVDSVGIQIEAGAVGVRHAGTITATQTIPSGENIGLFGTVTFTGTVTVAGEMVVV
Ga0211593_10044951	3300020334	Marine	TGSDGSNTTSSWTDIGGGTILADADGNTNIEIGATTADEIDIDIAGTKIATFDAAGLAIETGGVGVRHNSTVGATATIASGETLGLFGTVTFTGVVTVAGEMVVV
Ga0211594_10767921	3300020340	Marine	ILADADGNTNIEIGATTSDKIDVDIAGTKVATFDGAGLVIETGGVGVRHNSSIGSTSTIASGETVGLFGTVTFTGVVTVAGEMVVV
Ga0211592_11325091	3300020341	Marine	YTGSDGSNTTSSWTDIGGGTILADADGNTNIEIGATTSDKIDVDIAGTKVATFDGAGLVIETGGVGVRHNSSIGSTSTIASGETVGLFGTVTFTGVVTVAGEMVVV
Ga0211604_10510612	3300020342	Marine	DIGGGTILADADGNTNIEIGATTADEIDIDIAGTKIATFDAAGLAIETGGVGVRHNSTVGATATIASGETLGLFGTVTFTGVVTVAGEMVVV
Ga0211477_100760132	3300020374	Marine	GGTILADADGNTNIEIGATTADEIDVDIAGTKVATFDAAGLAIETGGVGVRHNSTVAATASIASGETLGLFGTVTFTGVVTVAGEMVVV
Ga0211647_102736821	3300020377	Marine	SNTASSWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATFDAAGLAIETGAVGVRHNSTVAATAEIASGETLGLFGEVTFTGTVTIAGEMVIV
Ga0211527_102171991	3300020378	Marine	FNETDGKMQVYTGSDSSNTSSYWTDIGGGTILADADGNTNIEIGATTADEIDVDIAGTKVATVDAVGINIEAGAIGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0211652_100512613	3300020379	Marine	DASNTSSSWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATFDAAGLAIETGAVGVRHNSTVAATAEIASGETLGLFGEVTFTGTVTIAGEMVIV
Ga0211652_101832171	3300020379	Marine	TVPRFTTTERNAVTASTVKQGMIIFNETDGKMQVYTGSDASNTSSNWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDAVGINIEAGAIGVRHAGTITGTATIAAGENIGLFGEVTFTGTVTVAGEMVVV
Ga0211497_101064482	3300020394	Marine	WTDIGGGTILADTDGNTNIEIGATTADEIDVDIAGTKVATVDAVGINIEAGAVGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0211636_100533992	3300020400	Marine	NLTAGSVKQGMIIFNETDGKMQVYTGSDASNTSSSWTDIGGGTILADADGNTNIEIGATTADEIDIDIAGTKIATFDAAGLAIETGGVGVRHNSTVGATATIASGETLGLFGTVTFTGVVTVAGEMVVV
Ga0211499_102571001	3300020402	Marine	TILADTDGNTNIEIGATTADEIDVDIAGTKVATVDAVGINIEAGAVGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0211472_101286911	3300020409	Marine	LIVEVDPIEIGATTSDKIDVDIAGTKIATFDGAGLVIETGGVGVRHNSSIGSTSTIASGETLGLFGTVTFTGVVTVAGEMVVV
Ga0211644_1000243517	3300020416	Marine	AGSVKQGMIIFNETDGKMQVYTGSDASNTSSSWTDIGGGTIISDADGNTNIEIGATTSDEIDVDIAGTKVATVDAVGINIEAGAVGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0211528_101455421	3300020417	Marine	NALNSSVVKQGMIIFNETDGKMQVYTGSDSSNTSSSWTDIGGGTILADADGNTNIEIGATTADEIDVDIAGTKVATVDAVGINIEAGAIGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0211622_104098542	3300020430	Marine	AGSVKQGMIIFNETDGKMQVYTGSDASNTSSSWTDIGGGTILADADGNTNIEIGATTADEIDVDIAGTKIATFDSAGLAIETGAVGVRHNSTVAATAEIASGETLGLFGEVTFTGTVTIAGEMVIV
Ga0211539_101132172	3300020437	Marine	WTDIGGGTILADADGNTNIEIGATTADEIDVDIAGTKIATFDGAGINVEAGAVGVRHAGTISGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0211695_102816061	3300020441	Marine	GGTILADADGNTNIEIGATTSDEIDVDIAGTKIATFDGAGINVEAGAVGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0211564_101788004	3300020445	Marine	ADTDGNTNIEIAATTADKIDVDIAGTKMATLDSVGINIEAGAVGVRHAGTISATQTIAAGENIGLFGTVTFTGTVTVAGEMVVV
Ga0211548_103858361	3300020454	Marine	DIGGGTILADTDGNTNIEIGATTADEIDVDIAGTKVATFDAAGLAIETGGVGVRHNSTVAATATIASSETIGLFGTVTFTGVVTVAGEMVVV
Ga0211694_101211462	3300020464	Marine	VYTGSDGSNTSSSWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATFDGAGINVEAGAVGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0211694_104086631	3300020464	Marine	SWTDIGGGTIIADADGNTNIEIGATTSDQIDVDIAGTKVATLDSVGIQIEAGAVGVRHAGTITATQTIPSGENIGLFGTVTFTGTVTVAGEMVVV
Ga0213858_102162842	3300021356	Seawater	ALATADVFAGLIIYNETDSKMQVYTGTDNTNNSGDWTDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVEGEMVVV
Ga0213864_102434641	3300021379	Seawater	TDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGTVTFTGTVTVEGEMVVV
Ga0222718_100452157	3300021958	Estuarine Water	NSGDWNDIGGGSIISDADGNTNIEIGATTADEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVAGEMVVV
Ga0222718_103344821	3300021958	Estuarine Water	SGDWTDIGGGSIISDADGNTNIEIGATTADEIDVDIAGTKKFTIDDVGIFSEAETLGYSNTNSISATLTIPANRNVGLFGTVTFTGTVTVEGEMVVV
Ga0222716_103215982	3300021959	Estuarine Water	TTERNALATADVLAGLIIYNETDSKMQVYTGTDNTNNSGDWTDIGGGSIISDADGNTNIEIGATTADEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVAGEMVVV
Ga0222716_105387082	3300021959	Estuarine Water	IISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAVGIGIETDGVGFSNSNTIAATATIPSDRNVGLFGTLAFTGVVTIEGQLDVL
Ga0222719_108174301	3300021964	Estuarine Water	IGGGSIISDADGNTNIEIGATTADEIDVDIAGTKKFTIDDVGIFSEAETLGYSNTNSISATLTIPANRNVGLFGTVTFTGTVTVEGEMVVV
Ga0255773_102014541	3300022925	Salt Marsh	VPRFSTTERNALATADVFAGLIIYNETDSKMQVYTGTDNTNNSGDWTDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAVGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVEGEMVVV
Ga0228638_11507772	3300024230	Seawater	IFNETDGKMQVYTGSDSSNTSSSWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATLDSVGINIEAGAIGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0208666_11230411	3300025102	Marine	FSTTERNALNSSVVKQGMIIFNETDGKMQVYTGSDSSNTSSSWTDIGGGTILADADGNTNIEIGATTSDEIDVDIAGTKIATFDGAGINVEAGAVGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0209336_100775272	3300025137	Marine	GGTILADADGNTNIEIGATTSDEIDVDIAGTKIATFDGAGINIEAGAVGIRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0209645_11503082	3300025151	Marine	SSVVKQGMIIFNETDGKMQVYTGSDSSNTSSSWTDIGGGTILADADGNTNIEIGATTADEIDVDIAGTKVATVDAVGINIEAGAIGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0209305_10846432	3300025712	Pelagic Marine	ISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAVGLNIEAGAIGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVEGEMVVV
Ga0208543_11237962	3300025810	Aqueous	GTDNTNNSGDWTDIGGGSIISDADGNTNIEIGATTTDEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVEGEMVVV
Ga0209951_11010032	3300026138	Pond Water	IIYNETDSKMQVYTGTDNTNNSGDWTDIGGGSIISDADGNTNIEIGATTADEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVAGEMVVV
Ga0209932_11193842	3300026183	Pond Water	TDNTNNSGDWTDIGGGSIISDADGNTNIEIGATTADEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVAGEMVVV
Ga0209929_10403481	3300026187	Pond Water	GNTNIEIGATTADEIDVDIAGTKIATFDAAGLNIETDAVGVRHAGTIAATATVAAGENIGLFGEVTFTGTVTVAGEMVVV
Ga0257110_101043810	3300028197	Marine	ILADADGNTNIEIGATTSDKIDVDIAGTKIATFDGAGINVEAGAVGIRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0183748_100262218	3300029319	Marine	ALTAGSVKQGMIIFNETDGKMQVYTGSDASNTASSWTDIGGGTILADSDGNTNIEIGATTADEIDVDIAGTKVATVDAVGINIEAGAVGVRHAGTITGTATIAAGENIGLFGDVTFTGTVTVAGEMVVV
Ga0183748_10938353	3300029319	Marine	DADGNTNIEIGATTADEIDIDIAGTKVATFDAAGLAIETGGVGVRHNSTVAATASIASGETLGLFGTVTFTGVVTVAGEMVVV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091570

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences