Metagenome Family F091549

Basic Information
Family ID	F091549
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	45 residues
Representative Sequence	LLVYLVDNTIDGQGASPRELRAVLGRLIPGLEILTEPFHSVS
Number of Associated Samples	99
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	50.00 %
% of genes near scaffold ends (potentially truncated)	5.61 %
% of genes from short scaffolds (< 2000 bps)	5.61 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Most Common Taxonomy
Group	Unclassified (95.327 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.149 % of family members)
Environment Ontology (ENVO)	Unclassified (42.056 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.682 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.57% β-sheet: 20.00% Coil/Unstructured: 61.43%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13360	PQQ_2	76.64
PF13570	PQQ_3	14.02
PF01678	DAP_epimerase	3.74
PF09678	Caa3_CtaG	0.93
PF14559	TPR_19	0.93
PF02113	Peptidase_S13	0.93
PF15919	HicB_lk_antitox	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0253	Diaminopimelate epimerase	Amino acid transport and metabolism [E]	3.74
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.93

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
All Organisms	root	All Organisms	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
cellular organisms	root	All Organisms → cellular organisms	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.87 %

Scaffold	Taxonomy	Length	IMG/M Link
3300004463\|Ga0063356_102522947	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300005345\|Ga0070692_10606404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300005546\|Ga0070696_101384290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300010038\|Ga0126315_10484637	Not Available	787	Open in IMG/M
3300018429\|Ga0190272_10172211	All Organisms → cellular organisms → Bacteria → Acidobacteria	1524	Open in IMG/M
3300028380\|Ga0268265_10764647	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.42%
Host-Associated	Host-Associated	34.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.88%
Plants	Host-Associated → Plants	34.58%
Aquatic	Environmental → Aquatic	6.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.08%
Sediment	Environmental → Aquatic → Sediment	4.67%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Marine	Environmental → Aquatic → Marine	0.93%
Cave	Environmental → Terrestrial → Cave	0.93%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.19%
Loam	Environmental → Terrestrial → Soil → Loam	15.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.28%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.93%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.93%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.67%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.74%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.93%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.93%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015161	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1B, Ice margin)	Environmental	Open in IMG/M
3300015255	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10D	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300034144	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 58SNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1046341242	3300000364	Soil	VTTDSLIYLIDNTIDGRGASPRELRAVLGRVQDGVEILTEPYHAVSLERVTSLRP
JGI10216J12902_1003777282	3300000956	Soil	VSTDSLIYLIDNTLDGQGASPRELRAVLGRVWDGVEILTE
soilL2_100026324	3300003319	Sugarcane Root And Bulk Soil	VLVYLVDNTVDGQGASPREIRAVLGRLIPGLEILTEPFHNVSLER
Ga0055465_100474673	3300004013	Natural And Restored Wetlands	LLVYLVDNTIDGQGASPREIRAVLGRLIPGLEILTEPFHSVSLERV
Ga0063356_1025229471	3300004463	Arabidopsis Thaliana Rhizosphere	LLVYLVDNTIDGQGASPRELRAVLGRLIPGLEILTEPFHTVSLERVRSLRPSHIIL
Ga0062592_1006682531	3300004480	Soil	LLVYLVDNTINGQGDSPREIRAVLGRLIPGLEILTEPFYNV
Ga0062591_1000763711	3300004643	Soil	LLVYLVDNTIDGHGDSPREIRAVLGRLIPGVEILTEPFHTVSLERVRSLK
Ga0066671_104976121	3300005184	Soil	LLVYLVDNTIDGQGASPREIRAVLGRLIPGVEILTEPFHTVSLERVRSLRP
Ga0065704_108225552	3300005289	Switchgrass Rhizosphere	VSSASLIYLIDNTLGGQGASPRELRAVLSRIQEGVEILTEPYHA
Ga0065705_110120761	3300005294	Switchgrass Rhizosphere	MLVYLVDNTIENKGDSPRELRAVLGRLIPGIEILTEPFHSVSLERVR
Ga0070690_1006285341	3300005330	Switchgrass Rhizosphere	VSSSSSLIYLIDNTLDGQGASPRELRAVLGRMQEGVEILTEP
Ga0070677_100713161	3300005333	Miscanthus Rhizosphere	LLVYLVDNTIDGQGASPRELRAVLSRLIAGIEILTEPFHGVSLER
Ga0068869_1018339991	3300005334	Miscanthus Rhizosphere	LLVYLVDNTIDGQGASPREIRAVLGRLVPGLEILTEPFHNVTLE
Ga0070680_1012799312	3300005336	Corn Rhizosphere	MLVYLVDNTIENKGDSPRELRAVLGRLIPGIEILTEPFHSVSLERVRS
Ga0070682_1019950771	3300005337	Corn Rhizosphere	LLIYLIDNTIDGQGDSPRELRAVLCRMRAGLEILTEPFHAV
Ga0070691_106117902	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MLVYLVDNTIENKGDSPRELRAVLGRLIPGIEILTEPFHAVSLERVRS
Ga0070692_106064042	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MIYLIDNTLDGQGASPRELRDALARVCAGDEILTEPFPAVSLERVESLRPSHII
Ga0070675_1001625581	3300005354	Miscanthus Rhizosphere	VSSSPSLIYLIDNTLDGQGASPRELRAVLGRMCEGVEILTEP
Ga0070688_1008192981	3300005365	Switchgrass Rhizosphere	VSSSSSLIYLIDNTLDGQGASPRELRAVLGRMQEGVEILTEPYHAVSLKRVKSL
Ga0070705_1012237182	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VTNASLIYLIDNTLEGQGASPRELRAVLSRMHEGVEILTEPYHAVSLKRVKS
Ga0070662_1001346073	3300005457	Corn Rhizosphere	LLVYLVDNTIDGQGASPRELRAVLGRLIAGIEILTEPFHSVSLERVRSLRPSHI
Ga0070662_1003325272	3300005457	Corn Rhizosphere	MLVYLVDNTIENKGDSPRELRAVLGRLIPGIEILTEAFHSVSLERVRS
Ga0070681_118094321	3300005458	Corn Rhizosphere	LLVYLVDNTINGQGDSPREIRAVLGRLIPGLEILIEPFQHVSLERVRSLRPSH
Ga0068867_1013388091	3300005459	Miscanthus Rhizosphere	VTSASLIYLIDNTLEGQGASPRELRAVLSRIQEGVEILTEPYHAVSLKRVKSLRPSH
Ga0070685_114272642	3300005466	Switchgrass Rhizosphere	LLIYLVDNTIDGQGASPREVRAVLGRLIPGLEILIEPFHNVSLER
Ga0070697_1011706812	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRIYLVDNTIDGKGARPRELRSVLERLCEGVEILTEPFPAVS
Ga0068853_1002869383	3300005539	Corn Rhizosphere	LLVYLVDNTIDGQGASPREIRAVLGRLIPGLEILIEPFQN
Ga0070695_1001253963	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VTSASLIYLIDNTLEGQGASPRELRAVLSRIREGVEILTEPYTRVSLKRVKSLNPSHIVL
Ga0070695_1016342892	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MAASLIYLIDNTLDGQGASPRELSATLNRMGEGLKILIEP
Ga0070696_1013842901	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MLVYLVDNTIENKGDSPRELRAVLGRLIPGIEILTEPFHSVSLERVRSLRPSHIIL
Ga0070696_1018975331	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LSEVTLLVYLVDNTIDGHGDSPREIRAVLGRLIPGVEILTESFHTVSLERVRSLKPS
Ga0070693_1016474002	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VSATLIYLIDNTIDGQGDSPRELRAVLGRMRAGLEILTEPFPTVSLK
Ga0070665_1014848071	3300005548	Switchgrass Rhizosphere	LLVYLVDNTIDGQGASPREVRAVLGRLIPELEILIE
Ga0068861_1025502251	3300005719	Switchgrass Rhizosphere	VTSASLIYLIDNTLEGQGASPRELRAVLSRIQEGVEILTEPYHAVSLKRVKSLRPSHIVL
Ga0075428_1015588822	3300006844	Populus Rhizosphere	LLVYLVDNTIDGQGASPREVRAVLGRLIPGLEILIE
Ga0079215_103960801	3300006894	Agricultural Soil	MILLVDNTIDGQGASPRELQAALERIRPGLQIRLEPF
Ga0099830_111531752	3300009088	Vadose Zone Soil	LLIYLIDNTIDGQGASPRELRAVLGRMRAGLEILTEPFHAVSLK
Ga0105243_130737401	3300009148	Miscanthus Rhizosphere	VLVYLVDNTIDGQGASPREIRAVLGRLIPGLEILIEPFQNVSL
Ga0075423_114467841	3300009162	Populus Rhizosphere	LLVYLVDNTIDGHGDSPREIRAVLGRLIPGVEILTEP
Ga0075423_120108251	3300009162	Populus Rhizosphere	LRIYLIDNTIDGQGASPRELTAALLELRNGVEILTEP
Ga0105249_112827331	3300009553	Switchgrass Rhizosphere	VTATLIYLIDNTIHGQGDSPRELRSVLGRLRAGLEILTEPFPTVSLKRIK
Ga0126313_106824401	3300009840	Serpentine Soil	LLVYLVDNTIDGQGASPRELRAVLGRLIPGLEILTEPFHSVS
Ga0126315_104846371	3300010038	Serpentine Soil	VLVYLVDNTVDGQGASPREIRAVLGRLVPGLEILTEPFHSVSLERVRSLRPSHII
Ga0126310_100039041	3300010044	Serpentine Soil	LLVYLVDNTIDGQGASPRELRAVLGRLIPGLEILIEPFQSVS
Ga0134124_118064001	3300010397	Terrestrial Soil	VLVYLVDNTVDGQGASPREIRAVLGRLIPGLEILT
Ga0134122_110051731	3300010400	Terrestrial Soil	VTSASLIYLIDNTLEGQGASPRELRAVLSRMHEGVEILTEPYHAVSLK
Ga0134121_117516191	3300010401	Terrestrial Soil	VTATSLIYLVDNTINGQGDSPRELRAVLGRMREGLEILT
Ga0134121_124226502	3300010401	Terrestrial Soil	LLVYLVDNTIDGQGASPREVRAVLGRLIPELEILIEPFHQVSL
Ga0134123_132808911	3300010403	Terrestrial Soil	VTNASLIYLIDNTLEGQGASPRELRAVFSRMHEGVEILTEPYHAVSLKRVKSLRPSHIV
Ga0137455_10492671	3300011429	Soil	VSSASLIYLIDNTLEGQGASPRELRAVLSRIYEGVEILT
Ga0137457_11914131	3300011443	Soil	LLVYLVDNTIDGQGASPREVRAVLGRLIPELEILIEPFHNVSLDRVRS
Ga0137463_10089275	3300011444	Soil	VTSKSLIYLVDNTLDGQGASPRELRAVLGRLREGVEILTE
Ga0137390_108114631	3300012363	Vadose Zone Soil	MPASLVYLIDNTLDGQGPSPRELRAALGRVREGLEILIEPYHAV
Ga0157296_102394001	3300012905	Soil	VIYLIDNTIDGQGASPRELRSALKRVRPEMEILTEPFSEV
Ga0137394_105589291	3300012922	Vadose Zone Soil	VTNASLIYLIDNTLEGQGASPRELRAVLSRMHEGV
Ga0137359_117547282	3300012923	Vadose Zone Soil	VTTASLIYLIDNTLDGQGASPRELRAVLGRIQEGAEI
Ga0137407_114110021	3300012930	Vadose Zone Soil	LLIYLIDNTIHDQGDSPRELRAVLGRMREGLEILTEPFQSVSLKRVKSLKPSHII
Ga0164303_113092312	3300012957	Soil	LLIYLVDNTIDGQGASPREVRAVLGRLIPGLEILIEPFHHVSLERVRSLKP
Ga0164302_109036851	3300012961	Soil	LLIYLIDNTIDGQGDSPRELRAVLGRMRAGLEILAEPFHAVSLKRIKSL
Ga0164309_115516842	3300012984	Soil	LLIYLVDNTIDGQGASPREVRAVLGRLIPGLEILIEPFHHVSLERVRSLK
Ga0157373_113710341	3300013100	Corn Rhizosphere	LLVYLVDNTINGQGDSPREIRAVLGRLIPGLEILTE
Ga0157371_115723732	3300013102	Corn Rhizosphere	MIYLVDNTINGQGASPRELRSALERVRPEMEIMTEPFSEVSLQRI
Ga0157378_105128771	3300013297	Miscanthus Rhizosphere	LLVYLVDNTIDGQGASPRELRAVLGRLIAGIEILTEPFHGVSLERVRSLR
Ga0157378_111526041	3300013297	Miscanthus Rhizosphere	LLVYLIDNTIDGQGGRPRYIRAVLRRLSPVLEILIEPFQNVSLDRVRSLRP
Ga0163162_110396441	3300013306	Switchgrass Rhizosphere	LLVYLVDNTIDGQGASPREIRAVLGRLIPGLEILTEPFHTVSLERV
Ga0163162_111681772	3300013306	Switchgrass Rhizosphere	VSSASLIYLIDNTLEGQGASPRELRAVLSRIQEGVEILTEPYHAVSLK
Ga0075327_10892392	3300014272	Natural And Restored Wetlands	LLVYLVDNTIDGQGVSPREIRAVLGRLISGLEILTE
Ga0163163_105184992	3300014325	Switchgrass Rhizosphere	VTSASLIYLIDNTLEGQGASPRELRAVLSRIQEGVEI
Ga0137405_10176002	3300015053	Vadose Zone Soil	VTNASLIYLIDNTLEGQGASPRELRAVLSRMHEGVEILTEP
Ga0167623_10110541	3300015161	Glacier Forefield Soil	MSASLVYLIDNTIDGKGASPRELRAGLQRVHDRLEIVTEPYQAVSLERLEAIRPSHIV
Ga0180077_10945651	3300015255	Soil	VTNASLIYLIDNTLEGQGASPRELRAVLSRMHEGVEILTEPYHAVSLKRVKSLRPSHIVL
Ga0132256_1019309791	3300015372	Arabidopsis Rhizosphere	LRIYLIDNTIDGQGASPRELSAALLELRNGVEILTEPFNAVSLSRVNSLQPSHIV
Ga0132257_1003876093	3300015373	Arabidopsis Rhizosphere	LLVYLVDNTIDGHGDSPREIRAVLGRLIPGVEILTEPFHAVSLERVRSLKPSHI
Ga0132255_1006221841	3300015374	Arabidopsis Rhizosphere	LLVYLVDNTVDGHGDSPREIRAVLGRLIPGVEILTEPFHAVS
Ga0184608_104885771	3300018028	Groundwater Sediment	VSGLIYLIDNTLDGQGPSPRELRAVLGRMREGVEILIEPYHS
Ga0190265_109251361	3300018422	Soil	MLIYLVDNTIENKGDSPRELRAVLGRLIPGLEILT
Ga0190272_101722111	3300018429	Soil	MLIYLVDNTIDGQGASPRELRGILGRLRPGVEILTEPFGAVSLDRIRDLSPSHIVL
Ga0066667_106200592	3300018433	Grasslands Soil	VTTASLIYLIDNTLDGQGASPRELRAVLGRMREGAEILSEPFHAVS
Ga0190269_113232631	3300018465	Soil	MIYLVDNTIDGQGASPGEIRAALARINPDVEVLAEPFSSVSPERVQS
Ga0190268_110448032	3300018466	Soil	LLVYLVDNTIDGQGASPRELRAVLGRLIPGLEILTEPFHSVSLERVRSL
Ga0190274_125833341	3300018476	Soil	VSGSTSLIYLIDNTLDGQGASPRELRAVLGRMREGVEILTEPYH
Ga0190273_120062571	3300018920	Soil	MIYLIDNTIDGQGASPREIRVTLERIRPDLELLTE
Ga0187892_105245302	3300019458	Bio-Ooze	MLIYLIDNTIDGQGASPRELRAVLGRMRQEVEILTESFR
Ga0193717_11170381	3300020060	Soil	VIYLIDNTIDGQGASPRELRAVLGRLRPAVDILVEPFQA
Ga0210378_102387242	3300021073	Groundwater Sediment	MLIYLVDNTINGQGASPRELRAVLGRLRPEVEILTEPFSAVSLD
Ga0213882_103406793	3300021362	Exposed Rock	MIYLIDNTIDGQGASPREIREALGRVRPEAEVLMEPFHAVSLERV
Ga0207710_102372532	3300025900	Switchgrass Rhizosphere	LLVYLVDNTIDGQGASPRELRAVLGRLIPGLEILTEP
Ga0207645_112350631	3300025907	Miscanthus Rhizosphere	MLVYLVDNTIENKGDSPRELRAVLGRLIPGIEILT
Ga0207660_115278682	3300025917	Corn Rhizosphere	MLVYLVDNTIENKGDSPRELRAVLGRLIPGIEILTEPFHSVSLE
Ga0207690_116392371	3300025932	Corn Rhizosphere	LLIYLIDNTIDGQGASPREVRAVLGRLIPGLEILIEPFHNVTLERV
Ga0207706_108081172	3300025933	Corn Rhizosphere	MLVYLVDNTIENKGDSPRELRAVLGRLIPGIEILTEPFHSVSLERVRSLRP
Ga0207665_108703233	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LLVYLVDNTIDGHGDSPREIRAVLGRLIPGVEILTEPFHAVSL
Ga0207711_115026862	3300025941	Switchgrass Rhizosphere	LLVYLVDNTIDGQGASPRELRAVLSRLIAGIEILTEPFHSVSLERVRSLRPS
Ga0207679_114344001	3300025945	Corn Rhizosphere	LLVYLVDNTIDGQGASPREVRAVLGRLIPELEILIEPFHQVS
Ga0207648_112615491	3300026089	Miscanthus Rhizosphere	VLVYLVDNTIDGQGASPRELRAVLGRLIPGLEILI
Ga0207648_115956011	3300026089	Miscanthus Rhizosphere	VTSASLIYLIDNTLEGQGASPRELRAVLSRIQEGVEILTEP
Ga0207675_1022966191	3300026118	Switchgrass Rhizosphere	VLVYLVDNTIDGQGASPRELRAVLGRLIPGLEILIEPFQN
Ga0268265_107646471	3300028380	Switchgrass Rhizosphere	VSSASLIYLIDNTLEGQGASPRELRAVLSRIQEGVEILTEPYHAVSLKRVKSLRPSHIVL
Ga0272482_100668232	3300028578	Soil	MLIYLVDNTIDGQGASPRELRAALGRICDGCEILTEPFH
Ga0307504_100558971	3300028792	Soil	VIYLVDNTLDGQGASPRELQAVLRRLNEGIEILTEPF
Ga0307469_122949551	3300031720	Hardwood Forest Soil	VTRVTRASLIYLIDNTLDGQGASPRELRAVLSRMHEGVEILTEP
Ga0307405_111001082	3300031731	Rhizosphere	MLIYLVDNTIDGRGVSPRELRAVLGLLRPEAEILTEPFREVSLERVR
Ga0307468_1001693941	3300031740	Hardwood Forest Soil	VTTDSLIYLIDNTLDGRGASPRELRAVLGRVQDGVEILTEPYHAVSLQRVKSLRP
Ga0310891_101172151	3300031913	Soil	MLVYLVDNTIENKGDSPRELRAVLGRLIPGIEILTEPF
Ga0315912_100231306	3300032157	Soil	LLVYLVDNTIHGKGDSPRELRAVLGRLIPGLEILTEP
Ga0310889_1000033410	3300032179	Soil	MLVYLVDNTIENKGDSPRELRAVLGRLIPGIEILTEPFHAVSLERVRSLRPS
Ga0334962_009020_1026_1187	3300034144	Sub-Biocrust Soil	MIYLVDNTIDGQGASPREILAALKRLRPKTEVRVEPYPQVSLERLLELSPTHVI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091549

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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