Metagenome / Metatranscriptome Family F091530

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F091530
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	71 residues
Representative Sequence	MSKQDQIMRAWVQFPERWKQLWDACERGEGRYTRGVFVVNGKSAKPPCKKTQGQLIAEMLKSEPMGYLS
Number of Associated Samples	89
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.24 %
% of genes near scaffold ends (potentially truncated)	16.82 %
% of genes from short scaffolds (< 2000 bps)	85.05 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (11.215 % of family members)
Environment Ontology (ENVO)	Unclassified (23.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.252 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.02% β-sheet: 8.25% Coil/Unstructured: 57.73%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02771	Acyl-CoA_dh_N	18.69
PF00296	Bac_luciferase	15.89
PF00903	Glyoxalase	13.08
PF13669	Glyoxalase_4	5.61
PF16277	DUF4926	3.74
PF01636	APH	2.80
PF09907	HigB_toxin	1.87
PF01346	FKBP_N	1.87
PF07883	Cupin_2	0.93
PF13340	DUF4096	0.93
PF01381	HTH_3	0.93
PF13432	TPR_16	0.93
PF12773	DZR	0.93
PF05222	AlaDh_PNT_N	0.93
PF01370	Epimerase	0.93
PF00300	His_Phos_1	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	18.69
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	15.89
COG0545	FKBP-type peptidyl-prolyl cis-trans isomerase	Posttranslational modification, protein turnover, chaperones [O]	1.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	73.83 %
Unclassified	root	N/A	1.87 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	61.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.67 %
Unclassified	root	N/A	1.87 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	61.68 %
Unclassified	root	N/A	1.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	57.94 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3.74 %
Unclassified	root	N/A	1.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	57.94 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	2.80 %
Unclassified	root	N/A	1.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	57.94 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	2.80 %
Unclassified	root	N/A	1.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100755581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2921	Open in IMG/M
3300000559\|F14TC_109331634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300002568\|C688J35102_119601045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	729	Open in IMG/M
3300003315\|P22013IDBA_10094413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	731	Open in IMG/M
3300003890\|Ga0063162_1000020	All Organisms → cellular organisms → Bacteria	237114	Open in IMG/M
3300003890\|Ga0063162_1036602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	987	Open in IMG/M
3300004463\|Ga0063356_103187389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	707	Open in IMG/M
3300004801\|Ga0058860_11912672	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	718	Open in IMG/M
3300005332\|Ga0066388_100224272	All Organisms → cellular organisms → Bacteria	2510	Open in IMG/M
3300005332\|Ga0066388_101867218	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1071	Open in IMG/M
3300005332\|Ga0066388_102064861	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300005332\|Ga0066388_104285737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	727	Open in IMG/M
3300005335\|Ga0070666_11017577	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300005467\|Ga0070706_101919671	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300005471\|Ga0070698_100201116	All Organisms → cellular organisms → Bacteria	1928	Open in IMG/M
3300005529\|Ga0070741_10009011	All Organisms → cellular organisms → Bacteria	19648	Open in IMG/M
3300005529\|Ga0070741_10595620	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	987	Open in IMG/M
3300005764\|Ga0066903_101596128	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300005836\|Ga0074470_11275860	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	781	Open in IMG/M
3300005985\|Ga0081539_10000597	All Organisms → cellular organisms → Bacteria	73805	Open in IMG/M
3300005985\|Ga0081539_10108807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1399	Open in IMG/M
3300006047\|Ga0075024_100080947	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300006047\|Ga0075024_100693724	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300006845\|Ga0075421_102100889	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	599	Open in IMG/M
3300006846\|Ga0075430_100832198	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	761	Open in IMG/M
3300006847\|Ga0075431_101658078	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300006871\|Ga0075434_100150849	All Organisms → cellular organisms → Bacteria → Proteobacteria	2345	Open in IMG/M
3300006872\|Ga0101947_1016217	All Organisms → cellular organisms → Bacteria	3147	Open in IMG/M
3300006872\|Ga0101947_1079906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	812	Open in IMG/M
3300006872\|Ga0101947_1109412	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300006969\|Ga0075419_11033961	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	599	Open in IMG/M
3300007255\|Ga0099791_10509869	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	584	Open in IMG/M
3300009011\|Ga0105251_10450235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	597	Open in IMG/M
3300009012\|Ga0066710_102248817	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	794	Open in IMG/M
3300009038\|Ga0099829_10079420	All Organisms → cellular organisms → Bacteria	2508	Open in IMG/M
3300009088\|Ga0099830_10040294	All Organisms → cellular organisms → Bacteria	3232	Open in IMG/M
3300009089\|Ga0099828_11066874	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	718	Open in IMG/M
3300009090\|Ga0099827_11694389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	551	Open in IMG/M
3300009094\|Ga0111539_10108538	All Organisms → cellular organisms → Bacteria	3257	Open in IMG/M
3300009100\|Ga0075418_10733196	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1066	Open in IMG/M
3300009100\|Ga0075418_10782183	All Organisms → cellular organisms → Bacteria → Proteobacteria	1030	Open in IMG/M
3300009147\|Ga0114129_11028589	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300009553\|Ga0105249_12744757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300009691\|Ga0114944_1101996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1096	Open in IMG/M
3300009820\|Ga0105085_1094336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	580	Open in IMG/M
3300009821\|Ga0105064_1150015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300010036\|Ga0126305_10640215	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300010046\|Ga0126384_10203079	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300010047\|Ga0126382_10326368	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300010047\|Ga0126382_10589048	Not Available	913	Open in IMG/M
3300010166\|Ga0126306_11617067	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300010359\|Ga0126376_10287871	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300010360\|Ga0126372_12266218	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	593	Open in IMG/M
3300010362\|Ga0126377_11450311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	760	Open in IMG/M
3300010366\|Ga0126379_12416641	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625	Open in IMG/M
3300011269\|Ga0137392_10794024	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	782	Open in IMG/M
3300012205\|Ga0137362_11253933	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	626	Open in IMG/M
3300012212\|Ga0150985_111451174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	592	Open in IMG/M
3300012685\|Ga0137397_10895972	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	658	Open in IMG/M
3300012939\|Ga0162650_100076060	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300012944\|Ga0137410_11685371	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300014325\|Ga0163163_11389139	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	764	Open in IMG/M
3300014745\|Ga0157377_11057492	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300015245\|Ga0137409_10658195	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300017939\|Ga0187775_10473651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300017997\|Ga0184610_1289377	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300018059\|Ga0184615_10639385	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300018063\|Ga0184637_10108440	All Organisms → cellular organisms → Bacteria → Proteobacteria	1710	Open in IMG/M
3300018074\|Ga0184640_10291601	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	741	Open in IMG/M
3300018077\|Ga0184633_10115818	All Organisms → cellular organisms → Bacteria → Proteobacteria	1386	Open in IMG/M
3300018079\|Ga0184627_10096871	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1555	Open in IMG/M
3300018079\|Ga0184627_10170040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1154	Open in IMG/M
3300018466\|Ga0190268_10847147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	701	Open in IMG/M
3300018481\|Ga0190271_13403161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300019229\|Ga0180116_1290996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	592	Open in IMG/M
3300019360\|Ga0187894_10001001	All Organisms → cellular organisms → Bacteria	37564	Open in IMG/M
3300019360\|Ga0187894_10091928	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1642	Open in IMG/M
3300019360\|Ga0187894_10189954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1011	Open in IMG/M
3300019360\|Ga0187894_10387567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300019377\|Ga0190264_10219699	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1069	Open in IMG/M
3300019377\|Ga0190264_10851112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300019458\|Ga0187892_10102943	All Organisms → cellular organisms → Bacteria → Proteobacteria	1702	Open in IMG/M
3300020193\|Ga0194131_10006865	All Organisms → cellular organisms → Bacteria	15617	Open in IMG/M
3300022563\|Ga0212128_10246746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1130	Open in IMG/M
3300025900\|Ga0207710_10543412	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300025908\|Ga0207643_10612968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	701	Open in IMG/M
3300025910\|Ga0207684_11507310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300026075\|Ga0207708_10096781	All Organisms → cellular organisms → Bacteria	2281	Open in IMG/M
3300026118\|Ga0207675_100385133	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300026535\|Ga0256867_10078779	All Organisms → cellular organisms → Bacteria → Proteobacteria	1292	Open in IMG/M
3300027835\|Ga0209515_10231111	All Organisms → cellular organisms → Bacteria → Proteobacteria	1079	Open in IMG/M
3300027846\|Ga0209180_10046899	All Organisms → cellular organisms → Bacteria	2375	Open in IMG/M
3300027875\|Ga0209283_10401709	Not Available	893	Open in IMG/M
3300027915\|Ga0209069_10022094	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2979	Open in IMG/M
3300027915\|Ga0209069_10076691	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1593	Open in IMG/M
3300027961\|Ga0209853_1112529	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300031058\|Ga0308189_10193357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	732	Open in IMG/M
3300031114\|Ga0308187_10070557	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300031562\|Ga0310886_10831964	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	583	Open in IMG/M
3300031892\|Ga0310893_10608054	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300031908\|Ga0310900_10702560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	810	Open in IMG/M
3300031966\|Ga0308420_1004654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6844	Open in IMG/M
3300032829\|Ga0335070_10503226	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1148	Open in IMG/M
3300032829\|Ga0335070_11432814	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300033004\|Ga0335084_12216017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300033417\|Ga0214471_10485829	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	989	Open in IMG/M
3300034090\|Ga0326723_0465734	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.64%
Host-Associated	Host-Associated	20.56%
Engineered	Engineered	2.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.94%
Plants	Host-Associated → Plants	19.63%
Aquatic	Environmental → Aquatic	18.69%
Built Environment	Engineered → Built Environment	2.80%
Human	Host-Associated → Human	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.08%
Sediment	Environmental → Aquatic → Sediment	11.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.61%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.67%
Cave	Environmental → Terrestrial → Cave	4.67%
Freshwater	Environmental → Aquatic → Freshwater	2.80%
Unclassified	Engineered → Built Environment → Unclassified	2.80%
Peat	Environmental → Terrestrial → Peat	0.93%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.93%
Digestive System	Host-Associated → Human → Digestive System	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.21%
Loam	Environmental → Terrestrial → Soil → Loam	10.28%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.67%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	4.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.74%
Sand	Environmental → Terrestrial → Soil → Sand	2.80%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified	2.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.93%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.21%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	4.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.80%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.80%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified → Unclassified	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.93%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.93%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.93%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.93%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.41%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.74%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.80%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.80%
Drinking Water Pipes	Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Drinking Water Pipes	2.80%
Hot Spring Sediments	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediments	1.87%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.87%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.87%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.93%
Hot Spring Phototrophic Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat	0.93%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.93%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.93%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.93%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.93%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003315	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P2 sample	Environmental	Open in IMG/M
3300003890	Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - Chocolate Pots Core 3, 1cm	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006872	Biofilm microbial communities from drinking water pipes in Singapore	Engineered	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300020193	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031966	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS55	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1007555814	3300000364	Soil	MSNQDQIMRAWVQFPERWQQLWDACERGEGRYTRGVFVMSGKTDKPPQKKTQGQLIAEMLKSEPMGYLS*
F14TC_1093316341	3300000559	Soil	MSKQEEIMRAWVQFPERWKQLWDTCERGEGRYTRGVFVLRGXXXXXXXQKTQGQIIA
C688J35102_1196010451	3300002568	Soil	MSNQDQIMRAWVQFPERWKQLWDACERGEGRYTRGVFVVSGKGTKPLQKKTQGQIIAEILKSEPMGYLS*
P22013IDBA_100944132	3300003315	Ore Pile And Mine Drainage Contaminated Soil	MKKTTAKQEDMMRAWVDFPERWKSLWDTCEQGKGRYTRGVFVLNGKCSSSSPLLPPPPKKTYGQLIAEMLKSEPMGYLS*
Ga0063162_1000020126	3300003890	Hot Spring Sediments	MKKTKPKQDAIMHAWVKAPERWQQLWDACEKGAGRYTHGLFVLEGKRLEPPKKTQGQLIAELLRSEPMGYLS*
Ga0063162_10366022	3300003890	Hot Spring Sediments	MKQKKSKQDELMRAWVNSPERWQQLWDACEKGGGHYTRGVFVLNGKRLAPLEPPRRKTQGQLIAELLKSEPMGYLS*
Ga0063356_1031873891	3300004463	Arabidopsis Thaliana Rhizosphere	MAKQEDLMRAWVKYPERWQRLWEVCERGGGRYTRGVFVVQGKAEKPPLQKTQGQLIAEMLKSEPMGYLS*
Ga0058860_119126722	3300004801	Host-Associated	MAKQEDLMRAWVKYPERWQRLWEVCERGGGRYTRGVFVVQGKAEKPLLQKTQGQLIAEMLKSEPMGYLS*
Ga0066388_1002242722	3300005332	Tropical Forest Soil	MSKQEEIMRAWVQFPERWKQLWDACEQGEGRYTRGVFVLSGKSASRPHRKTQGQIIAEMLKNEPMGYLS*
Ga0066388_1018672181	3300005332	Tropical Forest Soil	MSNQDQIMRAWVQFPARWKQLWEACERGEGRYTRGVFVVHGKNGKPPRKKTQGQLIAEMLKSEPMGYLS*
Ga0066388_1020648612	3300005332	Tropical Forest Soil	MSKQDQIMRAWVQFPERWQRLWEACERGEGRYTHGVFVVKGKGAKPPCKKTQGQIIAEMLKSEPMGYLS*
Ga0066388_1042857372	3300005332	Tropical Forest Soil	MKKMTTKQDDIMRTWVEFPQRWQSLWDLCQQGKGRYTRGVFVLNGKSTPPSSSPPPRKTQGQIIAEMLKSEPMGYLS*
Ga0070666_110175771	3300005335	Switchgrass Rhizosphere	KYPERWQRLWEVCERGGGRYTRGVFVVQGKAEKPLLQKTQGQLIAEMLKSEPMGYLS*
Ga0070706_1019196712	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSKQDQIMRAWVQFPERWQQLWEACERGEGRYTHGVFVVKGKSTKPPCKKTQGQIIAEMLKSEPMGYLS*
Ga0070698_1002011162	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSKQDQIMRAWVQFPERWQQLWDACERGEGRYTHGVFVVNGKSAKPPCKKTQGQIIAEMLKNEPMGYLS*
Ga0070741_1000901110	3300005529	Surface Soil	MAKQEDLMRAWVKHPERWQQLWDMCERGGGRYTRGVFVVKGKAENPLPQKTPGQLIAEMLKSEPMGYLS*
Ga0070741_105956202	3300005529	Surface Soil	MKKTKPTQDAILRAWVKAPERWQQLWDVCEKGAGRYTHGLFVLYGRRPAPPKKTQGQLIADLLRSEPMGYLS*
Ga0066903_1015961282	3300005764	Tropical Forest Soil	MAKQEDLMRAWVKYPERWQQLWDMCEQGGGRYTRGVFVMKGKAEKPPLQKTQGQLIAEMLKSEPMGYLS*
Ga0074470_112758602	3300005836	Sediment (Intertidal)	MKKSASKQDDIMRAWVKAPERWQQLWDTCESGGGRYTRGVFVLNGKAATPPPPPVRKTQGQIIAELLKSEPMGYLS*
Ga0081539_1000059710	3300005985	Tabebuia Heterophylla Rhizosphere	MSKQDDLMRAWVRYPERWQQLWNVCKRGEGRYTRGVFVVKGKSEKPPLQKTQGQIIAEMLKSEPMGYLS*
Ga0081539_101088072	3300005985	Tabebuia Heterophylla Rhizosphere	MAKQEDLMRAWVKHPERWQQLWDMCEQGEGRYTRGVFVVKGKAEKPLRQKTQGQLIAEMLKSEPMGYLS*
Ga0075024_1000809472	3300006047	Watersheds	MAKQEDLMRAWVKYPERWQQLWDMCEQGGGRYTRGVFVVKGKAEKPSIQKTQGQLIAEMLKSEPMGYLS*
Ga0075024_1006937242	3300006047	Watersheds	MSKQDDLMRAWVRYPERWQELWNACERGEGRYTRGVFVVKGKGEKPLRQKTQGQIIAEMLKSEPMGYLS*
Ga0075421_1021008891	3300006845	Populus Rhizosphere	MKKTTAKQDDIMRVWVRFPERWQLLWDICQQGKGRYTRGVFVLNGKSTSPSSPPPPKKTQGQIIAEMLKSEPMGYLS*
Ga0075430_1008321982	3300006846	Populus Rhizosphere	MAKQEDLMRAWVKYPERWQRLWEVCERGGGRYTRGVFVVQGKAEKPPLQKTQGQLIAEMLKS
Ga0075431_1016580782	3300006847	Populus Rhizosphere	MKKTTAKQDDIMRAWVRFPERWQLLWDICQQGKGRYTRGVFVLNGKSVSPSSPSPPRKTQGQIIAEMLKSEPMGYLS*
Ga0075434_1001508493	3300006871	Populus Rhizosphere	MSKQDQIMRAWVQFPERWQRLWEACERGEGRYTHGVFVVKGKSTKPPCKKTQGQIIAEMLKSEPMGYLS*
Ga0101947_10162172	3300006872	Drinking Water Pipes	MKHTTSKQDELMRAWVKSPERWQQLWDACEKGEGRYTRGVFVMHGKRSVSPPCKTQGQLIAEMLKSEPMGYLS*
Ga0101947_10799062	3300006872	Drinking Water Pipes	MAKQEDLMRAWVQYPERWQQLWDRCEQGGGRYTRGVFVITGKAEKSLRQKTPGQIIAEMLKSEPMGYLS*
Ga0101947_11094122	3300006872	Drinking Water Pipes	MLLCVSEKTMKRAKPKQDEIMRAWVSHPERWQQLWTACEKGGGRYTRGVFVLNGKRSEPPPKKTQGQIIAEMLKSEPMGYLS*
Ga0075419_110339612	3300006969	Populus Rhizosphere	MAKQEDLMRAWVKYPERWQRLWEMCERGGGRYTRGVFVVQGKAEKPPLQKTQGQLIAEMLKSEPMGYLS*
Ga0099791_105098692	3300007255	Vadose Zone Soil	VAKQEELMRAWVQFPERWKQLWDACEQGEGRYTRGVFVLSGKNASRPCQKTQGQIIAEMLKSEPMGYLS*
Ga0105251_104502352	3300009011	Switchgrass Rhizosphere	MAKQEDLMRAWVKYPERWQQLWEVCERGGGRYTRGVFVVQGKAEKPPLQKTQGQLIAEML
Ga0066710_1022488171	3300009012	Grasslands Soil	MSKQDQIMRAWVQFPERWQRLWEACERGEGRYTHGVFVVKGKSTKPPCKKTQGQIIAEMLKSEPM
Ga0099829_100794204	3300009038	Vadose Zone Soil	MSKPEEIMRAWVQFPERWKQLWDACQRGEGRYTRGVFVLNGKGASQPRQKTQGQIIAELLKSEPMGYLS*
Ga0099830_100402941	3300009088	Vadose Zone Soil	MSKPEEIMRAWVQFPERWKQLWDACQRGEGRYTRGVFVLNGKGASQPRQKTQGQIIAELLKSEPMGYL
Ga0099828_110668742	3300009089	Vadose Zone Soil	VHDDLKNLPCSGENMKKATTNQEQIMRAWVQFPERWKQLWDACEQGEGRYTRGVFVLSGKNASRPCQKTQGQIIAEMLKSEPMGYLS*
Ga0099827_116943891	3300009090	Vadose Zone Soil	RAWVQFPERWKRLWDACERGEGRYTRGVFVLGGKGTERPRQKTQGQIIAELLKSEPMGYLS*
Ga0111539_101085382	3300009094	Populus Rhizosphere	MSKQDDLMRTWVQHPERWQELWNMCERGGGRYTRGVFVMKGKGEKPLKQKTQGQLIAEMLKSEPMGYLS*
Ga0075418_107331962	3300009100	Populus Rhizosphere	MAKQEDLMRAWVKYPERWQRLWEVCEQGGGRYTRGVFVVQGKAEKPPLQKTQGQLIAEMLKSEPMGYLS*
Ga0075418_107821832	3300009100	Populus Rhizosphere	MKKTTAKQDDIMRAWVRFPERWQLLWNICQQGKGRYTRGVFVLNGKSTSPSSPPPPKKTQGQIIAEMLKSEPMGYLS*
Ga0114129_110285892	3300009147	Populus Rhizosphere	MSKQDQIMRAWVQFPERWQRLWEACERGEGRYTHGVFVVKGKGTKPPCKKTQGQIIAEMLKSEPMGYLS*
Ga0105249_127447571	3300009553	Switchgrass Rhizosphere	MAKQEDLMRAWVQYPERWQRLWDMCEQGGGRYTRGVFIVKGKAEKPPQPKTQGQIIAEMLKSEPMGYLS*
Ga0114944_11019961	3300009691	Thermal Springs	MSKQDQIMRAWVQFPERWKQLWDACEAGQGRYTRGVFVVNGKGMKPPRKKTQGQLIAEILKSEPMGYLS*
Ga0105085_10943361	3300009820	Groundwater Sand	MKRTKPTQDDIMRAWVNSPERWQRLWDACENGGGRYTRGLFVMNGKRSEPRVKKTQGQLIAEMLKSEPMGYLS*
Ga0105064_11500151	3300009821	Groundwater Sand	RTKPTQDDIMRAWVNSPERWQRLWDACENGGGRYTRGLFVMNGKRSEPRVKKTQGQLIAEMLKSEPMGYLS*
Ga0126305_106402151	3300010036	Serpentine Soil	MSKVGNTMKKTTAKQDDIMRAWVEFPERWKSLWDTCQQGKGRYTRGVFVLNGKSTPSSSPPPPKKTHGQIIAEMLKSEPMGYLS*
Ga0126384_102030793	3300010046	Tropical Forest Soil	MSKQDQIMRAWVQFPERWQRLWEACERGEGRYTHGVFIVKGKSAKPPCRKTQGQIIAEMLKSEPMGYLS*
Ga0126382_103263682	3300010047	Tropical Forest Soil	MSKQDQIMRAWVQFPERWQRLWEACERGEGRYTHGVFVVKGKSAKPPCKKTQGQIIAEMLKSEPMGYLS*
Ga0126382_105890482	3300010047	Tropical Forest Soil	MSKQDQIMRAWVQFPERWKQLWDACERGEGRYTRGVFVVNGKSAKPPCKKTQGQLIAEMLKSEPMGYLS*
Ga0126306_116170672	3300010166	Serpentine Soil	MKKPTAKQDDIMRAWVEFPERWKSLWDTCQQGKGRYTRGVFVLNGKSTPSWSPPPPKKTHGQIIAEMLKSEPMGYLS*
Ga0126376_102878712	3300010359	Tropical Forest Soil	MSKQEEIMRAWVQFPERWKQLWDACEQGEGRYTRGVFVVHGKSVKPPCKKTQGQIIAEMLKSEPMGYLS*
Ga0126372_122662181	3300010360	Tropical Forest Soil	MAKQEDLMRAWVKYPERWQRLWDMCEQGGGRYTRGVFVVKGKAEKPPLQKTQGQLIAEMLKSEPMGYLS*
Ga0126377_114503112	3300010362	Tropical Forest Soil	MSKQDQIMRAWVQFPERWKQLWDACERGEGRYTRGVFVVNGKSAKPPYKKTQGQLIAEMLKSEPMGYLS*
Ga0126379_124166411	3300010366	Tropical Forest Soil	MSRQDDIMRAWVNFPERWQHLWTVCENGGGRYTRGVFVINGKRSEPPRKKTQGQIIAEMLRSEPMGYLS*
Ga0137392_107940242	3300011269	Vadose Zone Soil	MRAWVDFPERWQQLWTVCEKGGGRYTRGVFVINGKRSEPPRKKTQGQIIAEMLRSEPMGYLS*
Ga0137362_112539332	3300012205	Vadose Zone Soil	MSKQDQIMRAWVRFPERWQQLWDACERGEGRYTHGVFVVNGKSAKPPCKKTQGQIIAEMLKNEPMGYLS*
Ga0150985_1114511741	3300012212	Avena Fatua Rhizosphere	VFDRGERGMDKQEDLMRAWVKYPERWQQLWDLCEQGGGRYTRGVFVVQGKAEKPPLQKTQGQLIAEMLKSEPMGYLS*
Ga0137397_108959721	3300012685	Vadose Zone Soil	MKRRGGVSFLNQILRNNMSRQDDIMRAWVNFPERWQQLWTVCEKGGGRYTRGVFVINGKRSEPPRKKTQGQIIAEMLRSEPMGYLS*
Ga0162650_1000760602	3300012939	Soil	MKKTTAKQDDIMRAWVKFPKRWQSLWDICQQGKGRYTRGVFVLNGRSTPSSSPPPPRKTQGQIIAEMLKSEPMGYLS*
Ga0137410_116853712	3300012944	Vadose Zone Soil	MSRQDDIMRAWVDFPERWQQLWTVCEKGGGRYTRGVFVINGKRSEPPRKKTQGQIIAEMLRSEPMGYLS*
Ga0163163_113891392	3300014325	Switchgrass Rhizosphere	VKYPERWQRLWEVCERGGGRYTRGVFVVQGKAEKPPLQKTQGQLIAEMLKSEPMGYLS*
Ga0157377_110574921	3300014745	Miscanthus Rhizosphere	QEDLMRAWVKYPERWQRLWEVCERGGGRYTRGVFVVQGKAEKPPLQKTQGQLIAEMLKSEPMGYLS*
Ga0137409_106581951	3300015245	Vadose Zone Soil	MSKQEEIMRAWVQFPERWKRLWDACERGEGRYTRGVFVLRGRGTERPRQKTQGQIIAELLKSEPMGYLS*
Ga0187775_104736511	3300017939	Tropical Peatland	MAKQEEIMRAWVRFPERWQQLWDACERGEGRYTRGVFVVHGKKPPCKKTQGQLIAEILKSEPMGYLS
Ga0184610_12893772	3300017997	Groundwater Sediment	MKRTKPTQNDIMRAWVNSPERWQRLWDACENGGGRYTRGLFVMNGKRSEPRVKKTQGQLIAEMLKSEPMGYLS
Ga0184615_106393851	3300018059	Groundwater Sediment	MSKQDDIMRAWVKFPERWKQLWDACEEGQGRYTRGVFIVNGKGAKSPQKKTEGQIIAEMLKNEPMGYLS
Ga0184637_101084402	3300018063	Groundwater Sediment	MSKQDDLMRAWVQSPERWKQLWDACEAGQGRYTRGVFVVNGKGAKPPERKTEGQIIAEMLKGEPMGYLS
Ga0184640_102916012	3300018074	Groundwater Sediment	MSKQDQIMRAWVKFPERWKQLWDACEAGQGRYTRGVFVVNGKGAKPPERKTEGQIIAELLKSEPMGYLS
Ga0184633_101158182	3300018077	Groundwater Sediment	MSKQEEMMRAWVQFPERWQRLWDACERGEGRYTRGVFVVNGKSTRPPWRKTQGQIIAELLKSEPMGYLS
Ga0184627_100968711	3300018079	Groundwater Sediment	MSKQDDLMRAWVQSPERWKQLWDACEAGQGRYTRGVFVVNGKGAKPPERKTEGQIIAELLKSEPMGYLS
Ga0184627_101700401	3300018079	Groundwater Sediment	MKKTTAKQDDIMRAWVAFPERWKSLWDTCQQGKGRYTRGVFVLNGKSTPPSSSLKKTQGQIIAEMLKSEPMGYLS
Ga0190268_108471472	3300018466	Soil	MKKTTAKQDDIMRAWVKFPERWQSLWDICQQGEGRYTRGVFVLNGKSTPPSSPPPLKKTHGQIVAEMLKSEPMGYLS
Ga0190271_134031612	3300018481	Soil	RRGLDRRESHTIFVVGDTMKKTNAKQDDIMRVWVDFPERWKSLWDTCQQGNGRYTRGVFVLNGKSTPPSAPPPKKTRGQIIADMLRSEPMGYLS
Ga0180116_12909962	3300019229	Groundwater Sediment	MKRTKPTQNYIMRAWVNSPERWQRLWDACENGGGRYTRGLFVMNGKRSEPRVKKTQGQLIAEMLKSEPMGYLS
Ga0187894_100010014	3300019360	Microbial Mat On Rocks	MSKQDEIMHAWVQFPERWQQLWNVCQQGEGRYTRGVFVINGKAVKPLRQKTQGQIIAELLKGEPMGYLS
Ga0187894_100919282	3300019360	Microbial Mat On Rocks	MAKQDDLMRAWVQSPERWKQLWDVCEAGQGRYTRGVFVVNGKGAKPPQKKTEGQLIAEMLKGEPMGYLS
Ga0187894_101899542	3300019360	Microbial Mat On Rocks	MKKTTAKPDDIMRAWVEFPERWKSLWDACEQGKGRYTRGVFVLNGKGTQPSTPPPPKKTQGQIIAEMLKSEPMGYLS
Ga0187894_103875672	3300019360	Microbial Mat On Rocks	MAKQEEIMRAWVQCPERWKQLWDACEEGQGRYTRGVFVVNGKGAKPPRKKTQGQVIAEMLKSEPMGYLS
Ga0190264_102196992	3300019377	Soil	MKKTTVKQDDIMRAWVEFPERWKSLWDTCQQGKGRYTRGVFVFNGKSTPPSSPPPLKKTHGQIIAEMLKSEPMGYLS
Ga0190264_108511122	3300019377	Soil	MKKMTAKQDDIMRAWVEFPERWKSLWDTCQQGKGRYTRGVFVLNGKSTPPSSPPPLRKTHGQIIAEMLKSEPMGYLS
Ga0187892_101029432	3300019458	Bio-Ooze	MSKQDQIMRAWVKFPERWKQLWDACEEGQGRYTRGVFVVNGKSTKSLPKKTQGQIIAEILKSEPMGYLS
Ga0194131_1000686512	3300020193	Freshwater Lake	MSKQDDLMRAWVRYPERWQQLWNVCEQGGGRYTRGVFVVNGKAEKPQQQKTPGQIIAEMLKSEPMGYLS
Ga0212128_102467461	3300022563	Thermal Springs	MSKQDQIMRAWVQFPERWKQLWDACEAGQGRYTRGVFVVNGKGMKPPRKKTQGQLIAEILKSEPMGYLS
Ga0207710_105434121	3300025900	Switchgrass Rhizosphere	MAKQEDLMRAWVKYPERWQRLWEVCERGGGRYTRGVFVVQGKAEKPPLQKTQGQLIAEMLKSEPMGYLS
Ga0207643_106129682	3300025908	Miscanthus Rhizosphere	LMRAWVKYPERWQRLWEVCERGGGRYTRGVFVVQGKAEKPPLQKTQGQLIAEMLKSEPMGYLS
Ga0207684_115073102	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSKQDQIMRAWVQFPERWQQLWDACERGEGRYTHGVFVVNGKSAKPPCKKTQGQIIAEMLKNEPMGYLS
Ga0207708_100967813	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MAKQEDLMRAWVKYPERWQRLWEVCERGGGRYTRGVFVVQGKAEKPLLQKTQGQLIAEMLKSEPMGYLS
Ga0207675_1003851333	3300026118	Switchgrass Rhizosphere	YPERWQRLWEVCERGGGRYTRGVFVVQGKAEKPPLQKTQGQLIAEMLKSEPMGYLS
Ga0256867_100787792	3300026535	Soil	MSKQDDIMRAWVQFPERWKQLWDACERGEGRYTRGVFVVNGKGTSQPQRKTQGQIIAEMLKSEPMGYLS
Ga0209515_102311112	3300027835	Groundwater	MSKQEEIMRAWVQFPERWKHLWDACQRGEGRYTRGVFVLNGKGASQPRQKTQGQIIAELLKSEPMGYLS
Ga0209180_100468992	3300027846	Vadose Zone Soil	MSKPEEIMRAWVQFPERWKQLWDACQRGEGRYTRGVFVLNGKGASQPRQKTQGQIIAELLKSEPMGYLS
Ga0209283_104017092	3300027875	Vadose Zone Soil	MSKPEEIMRAWVQFPERWKHLWDACQRGEGRYTRGVFVLNGKGASQPRQKTQGQIIAELLKSEPMGYLS
Ga0209069_100220944	3300027915	Watersheds	MSKQDDLMRAWVRYPERWQELWNACERGEGRYTRGVFVVKGKGEKPLRQKTQGQIIAEMLKSEPMGYLS
Ga0209069_100766912	3300027915	Watersheds	MAKQEDLMRAWVKYPERWQQLWDMCEQGGGRYTRGVFVVKGKAEKPSIQKTQGQLIAEMLKSEPMGYLS
Ga0209853_11125292	3300027961	Groundwater Sand	MKRTKPTQDDIMRAWVNSPERWQQLWDACENGGGRYTRGLFVMNGKRSEPRVKKTQGQLIAEMLKSEPMGYLS
Ga0308189_101933572	3300031058	Soil	MKKTTAKQDDIMRAWVEFPERWKSLWDTCEQGKGRYTRGVFVLNGKSTPPSLPPPLKKTQGQLIAEMLKSEPMGYLS
Ga0308187_100705572	3300031114	Soil	MKKTTAKQDDIMRAWVEFPERWKSLWDTCQQGKGRYTRGVFVLNGKSTPPSLPPPLKKTQGQIIAEMLKSEPMGYLS
Ga0310886_108319642	3300031562	Soil	MAKQEDLMRTWVKYPERWQRLWEVCERGGGRYTRGVFVVQGKAEKPPLQKTQGQLIAEMLKSEPMGYLS
Ga0310893_106080541	3300031892	Soil	DRRNTNMAKQEDLMRAWVKYPERWQRLWEVCERGGGRYTRGVFVVQGKAEKPPLQKTQGQLIAEMLKSEPMGYLS
Ga0310900_107025601	3300031908	Soil	QEDLMRAWVKYPERWQRLWEVCERGGGRYTRGVFVVQGKAEKSPLQKTQGQLIAEMLKSEPMGYLS
Ga0308420_10046546	3300031966	Hot Spring Phototrophic Mat	VLSKGGEDVSKQEQIMRAWLQAPERWKRLWDACQQGEGRYTRGVFVVRGKGMTPSRRKTQGQLIAEMLRSEPMGYLS
Ga0335070_105032262	3300032829	Soil	MFLCASEKTMKRAKPKQDEIMRAWVSHPERWQQLWTACEKGGGRYTRGVFVLNGKRLEPPPKKTQGQIIAEMLKSEPMGYLS
Ga0335070_114328142	3300032829	Soil	DDIMRAWVNFPERWQQLWNVCERGEGRYTRGVFVVNGKGKRPLRQRTQGQIIAELLRSEPMGYLS
Ga0335084_122160172	3300033004	Soil	MKRVKPKQDEIMHAWVSHPERWQQLWTACEKGGGRYTRGVFVLNGKRSEPPPKKTQGQIIAEMLKSEPMGYLS
Ga0214471_104858293	3300033417	Soil	MKRTKPTQDDIMRAWVNSPERWQRLWDACENGGGRYTRGLFVMNGKRSEPRVKKTQGQLIAEMLKSEPMGYLS
Ga0326723_0465734_208_417	3300034090	Peat Soil	MSKPEEIMRAWVQFPERWQQLWDACEQGEGRYTRGVFVLSGKGASRPRQKTQGQIIAEMLKSEPMGYLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091530

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences