NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F091515

Metagenome Family F091515

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F091515
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 92 residues
Representative Sequence VENAEAAYERAIDKLDAQARPQLEHSSAPLMANYREKLLVLDSAIADLKSQAGMNPANGHLRRQLLAMYQEKQDTLEQVLEAKQ
Number of Associated Samples 94
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.93 %
% of genes near scaffold ends (potentially truncated) 99.07 %
% of genes from short scaffolds (< 2000 bps) 91.59 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (90.654 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.953 % of family members)
Environment Ontology (ENVO) Unclassified
(24.299 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.187 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 66.96%    β-sheet: 0.00%    Coil/Unstructured: 33.04%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.79
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
f.13.1.0: automated matchesd6eida_6eid0.77013
a.48.1.1: N-terminal domain of cbl (N-cbl)d3buxb23bux0.76222
f.13.1.0: automated matchesd6tk6a_6tk60.75387
f.5.1.0: automated matchesd3pika_3pik0.73117
f.13.1.1: Bacteriorhodopsin-liked6s6ca_6s6c0.72347


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF00293NUDIX 3.74
PF13345Obsolete Pfam Family 1.87
PF13620CarboxypepD_reg 0.93
PF06418CTP_synth_N 0.93
PF00126HTH_1 0.93
PF04542Sigma70_r2 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0504CTP synthase (UTP-ammonia lyase)Nucleotide transport and metabolism [F] 0.93
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.93
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.93
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.93
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.93


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.65 %
UnclassifiedrootN/A9.35 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2065487018|GPINP_F5MS3JC02IO8PWNot Available509Open in IMG/M
2088090014|GPIPI_17024419All Organisms → cellular organisms → Bacteria → Acidobacteria2031Open in IMG/M
3300004156|Ga0062589_101075503All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae758Open in IMG/M
3300005167|Ga0066672_10270963All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1097Open in IMG/M
3300005175|Ga0066673_10849009All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300005295|Ga0065707_10355647All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae912Open in IMG/M
3300005332|Ga0066388_101920616All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1058Open in IMG/M
3300005332|Ga0066388_107066868All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae565Open in IMG/M
3300005340|Ga0070689_100998799All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae744Open in IMG/M
3300005436|Ga0070713_102252937All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae527Open in IMG/M
3300005437|Ga0070710_10842153All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae658Open in IMG/M
3300005526|Ga0073909_10158013All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae950Open in IMG/M
3300005536|Ga0070697_101865608All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300005537|Ga0070730_10211152All Organisms → cellular organisms → Bacteria1292Open in IMG/M
3300005537|Ga0070730_10867183All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae567Open in IMG/M
3300005598|Ga0066706_10399582All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1094Open in IMG/M
3300005618|Ga0068864_100438612All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1247Open in IMG/M
3300005718|Ga0068866_10383406All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae902Open in IMG/M
3300006031|Ga0066651_10399862All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium733Open in IMG/M
3300006852|Ga0075433_10710552All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae880Open in IMG/M
3300006903|Ga0075426_11573653All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae500Open in IMG/M
3300006954|Ga0079219_11516368All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae608Open in IMG/M
3300009098|Ga0105245_11464257All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium733Open in IMG/M
3300009143|Ga0099792_10814868All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium612Open in IMG/M
3300009177|Ga0105248_10247664All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2006Open in IMG/M
3300009545|Ga0105237_11015333All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium836Open in IMG/M
3300010048|Ga0126373_12729686Not Available551Open in IMG/M
3300010304|Ga0134088_10071327All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1615Open in IMG/M
3300010358|Ga0126370_11052507All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium747Open in IMG/M
3300010358|Ga0126370_11487726All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300010360|Ga0126372_11185823All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium787Open in IMG/M
3300010362|Ga0126377_12288086Not Available616Open in IMG/M
3300010366|Ga0126379_10120979All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2378Open in IMG/M
3300010375|Ga0105239_11494035All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium781Open in IMG/M
3300010376|Ga0126381_100458956All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1789Open in IMG/M
3300010376|Ga0126381_101960055All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium844Open in IMG/M
3300011269|Ga0137392_11136246All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M
3300012199|Ga0137383_10979105All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium617Open in IMG/M
3300012205|Ga0137362_10880470All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300012207|Ga0137381_10726921All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium862Open in IMG/M
3300012357|Ga0137384_11101867All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium636Open in IMG/M
3300012362|Ga0137361_10851304All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium828Open in IMG/M
3300012362|Ga0137361_10978810All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium765Open in IMG/M
3300012683|Ga0137398_10181506All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1381Open in IMG/M
3300012683|Ga0137398_10363971All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium981Open in IMG/M
3300012918|Ga0137396_10672776All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium764Open in IMG/M
3300012925|Ga0137419_10027907All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3414Open in IMG/M
3300012930|Ga0137407_10461859All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1182Open in IMG/M
3300012930|Ga0137407_11587822All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium623Open in IMG/M
3300012948|Ga0126375_11219702Not Available627Open in IMG/M
3300012957|Ga0164303_10372268All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium872Open in IMG/M
3300012961|Ga0164302_11161422All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium614Open in IMG/M
3300012984|Ga0164309_10119639All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1699Open in IMG/M
3300012986|Ga0164304_11277759All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300015371|Ga0132258_10861453All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2287Open in IMG/M
3300015372|Ga0132256_100628324All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1189Open in IMG/M
3300015372|Ga0132256_101976285Not Available690Open in IMG/M
3300015373|Ga0132257_102643308Not Available653Open in IMG/M
3300018431|Ga0066655_10294309All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1055Open in IMG/M
3300021560|Ga0126371_11366101All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium840Open in IMG/M
3300025899|Ga0207642_10280633All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium958Open in IMG/M
3300025922|Ga0207646_10505612All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1088Open in IMG/M
3300025939|Ga0207665_11006156All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300026088|Ga0207641_12566048All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300026475|Ga0257147_1022481All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium887Open in IMG/M
3300026489|Ga0257160_1024321All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium972Open in IMG/M
3300026538|Ga0209056_10068968All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3047Open in IMG/M
3300027376|Ga0209004_1006209All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1661Open in IMG/M
3300027605|Ga0209329_1108058All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium610Open in IMG/M
3300027775|Ga0209177_10464892All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300027857|Ga0209166_10075519All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1912Open in IMG/M
3300027857|Ga0209166_10285438All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium870Open in IMG/M
3300028536|Ga0137415_10492330All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1034Open in IMG/M
3300031122|Ga0170822_15686695All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300031128|Ga0170823_16255779All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300031231|Ga0170824_114733646All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2578Open in IMG/M
3300031231|Ga0170824_119200830All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300031231|Ga0170824_119528585All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2627Open in IMG/M
3300031446|Ga0170820_13707202All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium683Open in IMG/M
3300031543|Ga0318516_10690458All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300031573|Ga0310915_11056765Not Available565Open in IMG/M
3300031640|Ga0318555_10126310All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1361Open in IMG/M
3300031679|Ga0318561_10561656All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium629Open in IMG/M
3300031715|Ga0307476_10901528Not Available652Open in IMG/M
3300031720|Ga0307469_12232331Not Available533Open in IMG/M
3300031740|Ga0307468_101422940All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium638Open in IMG/M
3300031747|Ga0318502_10963823All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300031770|Ga0318521_10811329All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300031780|Ga0318508_1217580All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300031819|Ga0318568_10241492All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1118Open in IMG/M
3300031819|Ga0318568_10308522All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium983Open in IMG/M
3300031820|Ga0307473_10829513All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium662Open in IMG/M
3300031859|Ga0318527_10259876All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium738Open in IMG/M
3300031879|Ga0306919_10316507All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1187Open in IMG/M
3300031879|Ga0306919_10595598All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium853Open in IMG/M
3300031910|Ga0306923_10716912All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1112Open in IMG/M
3300031912|Ga0306921_10263931All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2017Open in IMG/M
3300031942|Ga0310916_10471845All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1069Open in IMG/M
3300031962|Ga0307479_10426871All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1310Open in IMG/M
3300032009|Ga0318563_10349080All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium801Open in IMG/M
3300032067|Ga0318524_10794426Not Available501Open in IMG/M
3300032076|Ga0306924_10804924All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1047Open in IMG/M
3300032174|Ga0307470_10171681All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1352Open in IMG/M
3300032180|Ga0307471_101169196All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium934Open in IMG/M
3300032261|Ga0306920_100704344All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1488Open in IMG/M
3300033180|Ga0307510_10313034All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1029Open in IMG/M
3300033289|Ga0310914_10961536All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium754Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.95%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.02%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.35%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.61%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil5.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.61%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.74%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.87%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.87%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.87%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.87%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.93%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.93%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.93%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2065487018Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026475Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-AEnvironmentalOpen in IMG/M
3300026489Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-AEnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027376Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031859Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033180Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EMHost-AssociatedOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPINP_002476802065487018SoilPDDQALFNKRTVREVEKAEAAYQQAIDKLDAQARPQLDNASTPWLASYREKLQVLDSAIADLRAQAGVNPANGHLRRQLLAMYQEKQDTLEEVLEAKQQ
GPIPI_010333902088090014SoilVRNVEKAEVAYEEAIDKLDAQARPQLENASTPLMSSYREKLQVLDSAITDLKLQAGVNPANGHLRRQLLAMYQEKQDTLEEVLEAKPQ
Ga0062589_10107550323300004156SoilAYEQAINNLDAQARPQLDKASTPLMAGYREKLQVLDSAIADLKSQAGVNPANGHLRRQLLAMYQEKQDTLEEVLEAKQ*
Ga0066672_1027096323300005167SoilSFAIWAIVKPKTRVIQDDQAALLKDTTVREVENAEAAYERAIDKLDAQTRPQLLNSSAPLMANYREKLLVLDSAIADLKSQAGVNPANGHLRRQLLAMYQQKQDTLEQVLEAKQ*
Ga0066673_1084900913300005175SoilKTPELAQNPALLNDRAVNDVEHAEAAYERAIDKLDAQARPQLENSSAPLMANYREKLLVLDSAIADLKAQAGINPANGHLRRQLLAMYREKQDTLEQVLEVKQ*
Ga0065707_1035564723300005295Switchgrass RhizosphereFITRPNHDRIPSKETFISVREVEKAEAAYEQAIDKLDAQARPQLDKASTPLMAGYREKLQVLDSAIADLKSQAGINPANGHLRRQLLAMYREKQETLEEVLEAKQ*
Ga0066388_10192061613300005332Tropical Forest SoilAESAYQQAIDKLDAQARPQLEKASTPLTASYREKLQVLDSAIADLKMQAGINPANGHLRRQLLAMYQEKQETLEEVLEAKQQ*
Ga0066388_10706686823300005332Tropical Forest SoilDSMVREVERTEAAYERAIDKLDERVRPQLEGAVTPLAASYREKLQVLDGAIAELQAEAHSNPGNGHLRRQLLAMYQEKKNTLEQVLEAKP*
Ga0070689_10099879923300005340Switchgrass RhizosphereTGTALWVGVHRNIGDPFVGSLLKDPAVRNVEKAEAAYEQAIDKLDAQARPQLEKASTPLMASYREKLQVLDSAIADLKSQAGINPANGHLRRQLLAMYQEKQATLEDVLEAKQQ*
Ga0070713_10225293723300005436Corn, Switchgrass And Miscanthus RhizosphereRTVNEVERAEAAYEHAIDKLDAQARPQLENSSTPLMANYREKLLVLDSAIADLKSQAGMNPANGHLRRQLLAMYQEKQDTLEQILEAKK*
Ga0070710_1084215313300005437Corn, Switchgrass And Miscanthus RhizosphereKPRNRRVDDTPQAFLKDRAVVNVERADAAYEQAIDKLDTQARPQLANSSTPLMASYREKLQVLDSAIADLKSQAGMNPANGHLRRQLLAMYQEKQDTLEQVLEAKQ*
Ga0073909_1015801323300005526Surface SoilNHDRIPSKETFISVREVEKAEAAYEQAIDKLDTQARPQLDKASTPLMAGYREKLQVLDSAIADLKSQAGINPANGHLRRQLLAMYREKQDTLEEVLEAKQ*
Ga0070697_10186560823300005536Corn, Switchgrass And Miscanthus RhizosphereRTVRNVEKAEVAYEEAIDKLDAQARPQLENASTPLMSSYREKLQVLDSAITDLKLQAGVNPANGHLRRQLLAMYQEKQDTLQEILETKR*
Ga0070730_1021115213300005537Surface SoilNEALLKDSAVNEVERAEAVYERAIDKLDTQARPQLENSSAPLMANYREKLLVLDSAIADLKLQAGINPGNGHLRRQLLAMYQEKQDTLEEILEAKK*
Ga0070730_1086718313300005537Surface SoilTPADQALLKDDAVRKVERAEAEYEQAIDKLDAQARPQLENGAMPLMASYREKLQVLDGAISDLKSQAGMNPGNGHLRRQLLAMYQEKQDTLEEILEAKQ*
Ga0066706_1039958213300005598SoilEVENAEAAYERAIDKLDAQTRPQLLNSSAPLMANYREKLLVLDSAIADLKSQAGVNPANGHLRRQLLAMYQQKQDTLEQVLEAKQ*
Ga0068864_10043861213300005618Switchgrass RhizosphereDKLDEQARAQLENASTPLMAGYREKLQVLDSAIADLRSQAEINPANGHLRRQLLAMYQEKQETLEEVLEAKQ*
Ga0068866_1038340623300005718Miscanthus RhizosphereFISVREVEKAEAAYEQAINNLDAQARPQLDKASTPLMAGYREKLQVLDSAIADLKSQAGVNPANGHLRRQLLAMYQEKQDTLEEVLEAKQ*
Ga0066651_1039986213300006031SoilAQNPALLNDRAVNDVEHAEAAYERAIDKLDAQARPQLENSSAPLMANYREKLLVLDSAIADLKAQAGINPANGHLRRQLLAMYREKQDTLEQVLEVKQ*
Ga0075433_1071055213300006852Populus RhizosphereVEKAEAAYEEAIDKLDAQARPQLDKASTPLMTSYREKLQVLDSAIADLKSQAGINPANGHLRRQLLAMYHEKQETLEEFLEAKQ*
Ga0075426_1157365323300006903Populus RhizosphereEAIDKLDAQARPQLDKASTPLMTSYREKLQVLDSAIADLKSQAGINPANGHLRRQLLAMYHEKQETLEEFLEAKQ*
Ga0079219_1151636813300006954Agricultural SoilFLKDPAVREVEKAEAAYQQAIDKLDAQARPQLDKASTPLMASYREKLQVLDSAIADLKLQAGVNPANGHLRRQLLAMYQEKQDTLEEVLEAKPQ*
Ga0105245_1146425723300009098Miscanthus RhizospherePSKETFISVREVEKAEAAYEQAIDKLDTQARPQLDKASTPLMAGYREKLQVLDSAIADLKSQAGVNPANGHLRRQLLAMYQEKQDTLEEVLEAKQ*
Ga0099792_1081486813300009143Vadose Zone SoilATSIWFLTTRKPDNLLGNQALLNDSAVSDVERAEAAYERAIDKLDAKARPQLENSSAPLMANYREKLLILDSAIADLKSQAGMNPANGHVRRELLAMYREKQDTLEQILEAKK*
Ga0105248_1024766413300009177Switchgrass RhizospherePHRNTGDPFAGSLLKDRTVRNVEKAEVAYEEAIDKLDAQARPQLENASTPLMSSYREKLQVLDSAITDLKLQAGVNPANGHLRRQLLAMYQEKQATLEEVLEAKPQ*
Ga0105237_1101533313300009545Corn RhizosphereRIPPKTTFISVREVEKAEAAYEQAINNLDAQARPQLDKASTPLMAGYREKLQVLDSAIADLRSQAGINPANGHLRRQLLAMYQEKQETLEEVLEAKQ*
Ga0126373_1272968623300010048Tropical Forest SoilEAAYEQAIDKLDAQARPELLNASTPLLAGYREKLQVLDSAIAELKAQAGVNPANGHLRRQLLAMYQEKQDTLEQVLEAKQ*
Ga0134088_1007132713300010304Grasslands SoilVENAEAAYERAIDKLDAQARPQLEHSSAPLMANYREKLLVLDSAIADLKSQAGMNPANGHLRRQLLAMYQEKQDTLEQVLEAKQ*
Ga0126370_1105250723300010358Tropical Forest SoilAVRNVEEKEAAYEAAIDKLDREARPELDQASTPLMASYREKLQVLDSAIADLKAQAGMNPANGHLRRQLLAMYQEKQFTLEEVLEAKQP*
Ga0126370_1148772613300010358Tropical Forest SoilAVWLVIRPVDPSQNRALLNDRAVNEVERAQADYERAIDKLDAQARPQLENSSTPLVANYREKLLVLDSAIADLKSQAGGNPANGHLRRQLLAMYQEKQDTLEQVLEAKQ*
Ga0126372_1118582313300010360Tropical Forest SoilAIDKLDAQARPRLETDSTPLMASYREKLQVLDSAIAELKSETGINPANGHLRRQLLAMYQEKQDTLEQVLEAKR*
Ga0126377_1228808613300010362Tropical Forest SoilASAGWIVVHHDPSIDEKARLLNNSTVNEVERAEAAYVRAIDQLDAEARPQLDHPASPLIASYREKLLVLDSAIAELRMQAGQNPANGHLRRQLLAMYQEKQDTLEQVLEEKK*
Ga0126379_1012097913300010366Tropical Forest SoilEAAYEAAIDKLDREARPELDQASTPLMASYREKLQVLDSAIADLKAQAGMNPANGHLRRQLLAMYQEKQFTLEEVLEAKQP*
Ga0105239_1149403523300010375Corn RhizosphereFVGSLLKDPAVRNVEKAEAAYEQAIDKLDAQARPQLEKASTPLMASYREKLQVLDSAIADLKSQAGINPANGHLRRQLLAMYQEKQATLEDVLEAKQQ*
Ga0126381_10045895623300010376Tropical Forest SoilVRNVEEKEAAYEAAIDKLDREARAELDKAPTPLMASYREKLQVLDSAIADLKAQAGMNPANGHLRRQLLAMYQEKQFTLEEVLEAKQP*
Ga0126381_10196005513300010376Tropical Forest SoilFAGDLLKDRTVRDVEKAEAAYEQAIDKLDREARPQLDKASTPLMTSNREKLQVLDSAITDLKAQAGLNPANGHLRRQLLAMYQEKRDTLEEVLEAKQQ*
Ga0137392_1113624613300011269Vadose Zone SoilIPQDQALLNDGTVKEVERAEAAYERAIDKLDAKARPQLENAAIPLMANYREKLAVLDSAIADLKSQAGINPANGHLRRQLLAMYQEKQDTLEELLEAKK*
Ga0137383_1097910523300012199Vadose Zone SoilAIDKLDAQARPQLEHSSAPLMANYREKLLVLDSAIADLKSQAGMNPANGHLRRQLLAMYQEKQDTLEQVLEAKQ*
Ga0137362_1088047023300012205Vadose Zone SoilNDGTGREVERAEAVYERAIDKLDAKARPQLENSSAPLMANYREKLEVLDSAIADLKSQAGINPANGHLRRQLLAMYQEKQDTLEEILEAKK*
Ga0137381_1072692113300012207Vadose Zone SoilLLKDTTVKEVENAEAAYERAIDKLDAQARPQLLNSSAPLMANYREKLLVLDSAIADLKSQAGVNPANGHLRRQLLAMYQQKQDTLEQVLEAKQ*
Ga0137384_1110186723300012357Vadose Zone SoilLLKDTTVKEVENAEAAYERAIDKLDAQTRTQLLNSSAPLMANYREKLLVLDSAIADLKSQAGMNPANGHLRRQLLAMYQQKQDTLEQVLEAKQ*
Ga0137361_1085130423300012362Vadose Zone SoilRAVNDVEHAEAAYERAIDKLDAQARPQLQNSSAPLMANYREKLLVLDSAIADLKSQASMNPANGHVRRELLAMYHEKQDTLEQVLEAKQ*
Ga0137361_1097881023300012362Vadose Zone SoilWFLANQRGRTIPDNQALLNDRAVNDVEHAEAAYERAIDKLDVQARAHLENSSDPLIANYREKLLVLDSAIADLKSQAGINPANGHLRRQLLAMYREKQDTLEQVLEVKQ*
Ga0137398_1018150633300012683Vadose Zone SoilRAIDKLDAQARPQLQNSTSPLLANYREKLFVLDSAIADLKSQTSINPANGHLRRELLAMYREKQDTLEQVLEVKQ*
Ga0137398_1036397123300012683Vadose Zone SoilRAIDKLDAQARPQLQNSTSPLLANYREKLFVLDSAIADLKSQASINPANGHLRRELLAMYREKQDTLEQVLEVKQ*
Ga0137396_1067277613300012918Vadose Zone SoilTYERAIDKLDTQARPQLQNSTSPLLANYREKLLVLDSAIADLKSQASINPANGHLRRELLAMYREKQDTLEQVLEVKQ*
Ga0137419_1002790713300012925Vadose Zone SoilNDGTVREVERAEAAYERAIDKLDAKARPQLENAATPLMANYREKLSVLDSAIADLKSQAGINPANGHLRRELLAMYQEKQDTLKEVLEAKQ*
Ga0137407_1046185923300012930Vadose Zone SoilENAEAAYERAIDKLDAQARPQLLNSSAPLLANYRERLLVLDSAIADLKSQAGMNPANGHLRRQLLAMYQQKQDTLEQVLEAKQ*
Ga0137407_1158782223300012930Vadose Zone SoilSSAIWVIVKPKAPVVKDDQAALLKDTTVKEVENAEAAYERAIDKLDAQARPQLLNSSAPLMANYREKLLVLDSAIADLKAQAGMNPANGHLRRQLLAMYQLKQDTLEQVLEAKQ*
Ga0126375_1121970223300012948Tropical Forest SoilDKLDAQARPQLEKASTPLTASYREKLQVLDSAIADLKMQAGINPANGHLRRQLLAMYQEKQETLQEVLEAKQQ*
Ga0164303_1037226823300012957SoilLNDRTVNEVERAEAAYEHAIDKLDAQARPQLDNSSTPLMANYREKLLVLDSAIADLKSQAGMNPANGHLCRQLLAMYQEKQDTLEQILEAKK*
Ga0164302_1116142213300012961SoilTVREVERAEAAYEQAIDKLDAQARPQLENAYTPLLASYREKLQVLDSAIADLQAQAGINPANGHLRRQLLAMYQEKQDTLEQVLEAKQ*
Ga0164309_1011963923300012984SoilLQNQALLNDRTVNEVERAEAAYEHAIDKLDAQARPQLDNSSTPLMANYREKLLVLDSAIADLKSQAGMNPANGHLCRQLLAMYQEKQDTLEQILEAKK*
Ga0164304_1127775913300012986SoilTVNEVERAEAAYEHAIDKLDAQARPQLDNSSTPLMANYREKLLVLDSAIADLKSQAGMNPANGHLCRQLLAMYQEKQDTLEQILEAKK*
Ga0132258_1086145313300015371Arabidopsis RhizosphereNVEKAEVAYEEAIDKLDEQARPQLENASTPLMASYREKLQVLDSAITDLKLQAGVNPANGHLRRQLLAMYQEKQDTLEEVLEAKPQ*
Ga0132256_10062832423300015372Arabidopsis RhizosphereSLLKDRTVRNVEKAEVAYEEAIDKLDAQARPQLENASTPLMASYREKLQVLDSAITDLKLQAGVNPANGHLRRQLLAMYQEKQDTLEEVLEAKPQ*
Ga0132256_10197628533300015372Arabidopsis RhizosphereSLLKDRTVRNVEKAEVAYEEAIDKLDAQARPQLENASTPLMSSYREKLQVLDSAITDVKLQAGVNPANGRLRRQLLAMYQEKQSTLEEVLEAKPQ*
Ga0132257_10264330813300015373Arabidopsis RhizosphereKSRRTVDSPTPALLKDDAVRSVERAEAVYEQAIDKLDVQARAQLENSPTPLMASYREKLQVLDSAIADLKLQAGVNPANGHLRRQLLAMYQEKQSTLEEVLEAKPQ*
Ga0066655_1029430913300018431Grasslands SoilDTTVKEVENAEAAYERAIDKLDAQARPQLEHSSAPLMANYREKLLVLDSAIADLKSQAGMNPANGHLRRQLLAMYQEKQDTLEQVLEAKQ
Ga0126371_1136610113300021560Tropical Forest SoilPLLRTNAVREVERAEVAYEQAIDKLDAQARPRLENDSTPLMASYREKLQVLDSAIAELKSEAGMNPANGHLRRQLLAMYQEKQDTLEQVLEAKR
Ga0207642_1028063313300025899Miscanthus RhizosphereFISVREVEKAEAAYEQAINNLDAQARPQLDKASTPLMAGYREKLQVLDSAIADLKSQAGVNPANGHLRRQLLAMYQEKQDTLEEVLEAKQ
Ga0207646_1050561213300025922Corn, Switchgrass And Miscanthus RhizosphereAEAAYERAIDKLDVQARPQLLNSSAPLMANYREKLLVLDSAIADLKSQAGMNPANGHLRRQLLAMYRQKQDTLEQVLEVKQ
Ga0207665_1100615623300025939Corn, Switchgrass And Miscanthus RhizosphereVREVERAEAAYEQAIDKLDAQARPQLENAYTPLLASYREKLQVLDSAIADLQAQAGINPANGHLRRQLLAMYQEKQDTLEQVLEAKQ
Ga0207641_1256604813300026088Switchgrass RhizosphereVERAEANYEQAIDKLDEQARAQLENASTPLMAGYREKLQVLDSAIADLRSQAEINPANGHLRRQLLAMYQEK
Ga0257147_102248113300026475SoilRAIDKLDTQARPQLQNSTSPLLANYREKLFVLDSAIADLKSQASINPANGHLRRELLAMYREKQDTLEQVLEVKP
Ga0257160_102432113300026489SoilAIDKLDARTRPQLQNSSAPLMANYREKLLVLDSAIADLKSQASINPANGHVRRELLAMYHEKQDTLEQVLEAKQ
Ga0209056_1006896813300026538SoilKPKTRVIQDDQAALLKDTTVREVENAEAAYERAIDKLDAQTRPQLLNSSAPLMANYREKLLVLDSAIADLKSQAGVNPANGHLRRQLLAMYQQKQDTLEQVLEAKQ
Ga0209004_100620913300027376Forest SoilNDVERAEANYEQAIDKLDAQARPQLQNSSAPLIANYREKLLVLDSAIADLKSQASMNPANGHVRRELLAMYHEKQDTLEQVLEAKQ
Ga0209329_110805813300027605Forest SoilASYERAIDKLDAEARPQLQNSTSPLLANYREKLFVLDSAIADLKSQASINPANGHLRRELLAMYREKQDTLEQVLEVKQ
Ga0209177_1046489223300027775Agricultural SoilAYVRAIDELDAQARPRLDNPATPLMASYREKLLILDGAIAELRSQANLNPGNGHLRRELLAMYQEKQDTLEEVVEAKK
Ga0209166_1007551933300027857Surface SoilEAVYERAIDKLDARARPQLENSSSPLMANYREKLLVLDSAIADLKLQAGINPGNGHLRRQLLAMYQEKQDTLEEILEAKK
Ga0209166_1028543813300027857Surface SoilAGPKTPADQALLKDDAVRKVERAEAEYEQAIDKLDAQARPQLENGAMPLMASYREKLQVLDGAISDLKSQAGMNPGNGHLRRQLLAMYQEKQDTLEEILEAKQ
Ga0137415_1049233023300028536Vadose Zone SoilDVERAEASYERAIDKLDAQARPQLQNSTSPLLANYREKLLVLDSAIADLKSQASINPANGHLRRELLAMYREKQDTLEQVLEVKQ
Ga0170822_1568669513300031122Forest SoilAEATYERAIDKLDAQARPQLQNSTSPLLANYREKLFVLDSAIADLKSQASINPANGHLRRELLAMYREKQDTLEQVLEVKQ
Ga0170823_1625577923300031128Forest SoilDNQALLNDRAVNDVERAEAVYERAIDKLDAQARPQLQNSSAPLMANYREKLLVLDSAIADLKSQASINPANGHLRRELLAMYREKQDTLEQVLEAKQ
Ga0170824_11473364613300031231Forest SoilERAEAVYERAIDKLDAQARPQLQNSSAPLMANYREKLLVLDSAIADLKSQAGINPANGHLRRELLAMYREKQDTLEQVLEAKQ
Ga0170824_11920083013300031231Forest SoilNEALLNDSTVNEVERAEVAYERAIDKLDAQARPQLDNSPSPLMANYREKLLVLDSAIADLKSQAGINPANGHLRRQLLAMYQEKQDTLEEILEAKK
Ga0170824_11952858543300031231Forest SoilPDNQALLNDRAVNDVERAEAVYERAIDKLDARARPQLQNSSAPLMASYREKLLVLDSAIADLKSQASINPANVHVRRELLAMYHEKQDTLEPVLEAKP
Ga0170820_1370720223300031446Forest SoilLFNDRMVNDVERAQADYERAIDRLDAQARPQLENFSAPLMANYREKLLVLDSAIADLKSQAGINPANGHLRRQLLAMYQEKQDTLEQIVEAKK
Ga0318516_1069045823300031543SoilEQAIDKLDAEARPELKDPATPLLAGYREKLAVLDSAIAELKSQASINPGNGHLRRQLLAMYQEKQDTLEQVLEAKQ
Ga0310915_1105676523300031573SoilDQALLNNRTVREVERAEAAYEQAIDKLDAQARPELLNPSTPLLAGYREKLEVLDSAIAELKSQAGVNPANGHLRRQLLAMYQEKQETLEQVLEAKQ
Ga0318555_1012631013300031640SoilIAGPLLTDRAVRNVEEKEAAYEAAIDKLDAEARPELDKASTPLMASYREKLQVLDSAIADLKAQAGMNPANGHLRRQLLAMYQEKQFTLEEVLEAKQP
Ga0318561_1056165623300031679SoilDKLDAEARPELKDPATPLRAGYREKLAVLDSAIAELKSQASINPGNGHLRRQLLAMYQEKQDTLEQVLEAKQ
Ga0307476_1090152823300031715Hardwood Forest SoilWFIVRPPGSKIPADQALFNDHTVREVEKAEAAYEQAIDKLDAQAGPQLENAATPLMASYREKLQVLDSAIADLKSQAGMNPGNGHLRRQLLAMYQEKQDTLEEVLEAKQ
Ga0307469_1223233113300031720Hardwood Forest SoilVWVWPPIKDSGIAHDILLKKRAVNEVEKAEAAYEQAIDKLDAQARPQLENASTPLMASYREKLQVLDSAIADLKSQAGINPANGHLRRQLLAMYQEKQDTLEQVLEAKQQ
Ga0307468_10142294023300031740Hardwood Forest SoilNQALFNNRTVREVEKAEAAYEQAIDKLDAQARPQLDNASTQLMASYREKLQVLDSAIADLRAQAGINPANGHLRRQLLAMYQEKQHTLEQVLEAKQP
Ga0318502_1096382323300031747SoilAYEQAIDKLDAEARPELKDPATPLLAGYREKLAVLDSAIAELKSQASINPGNGHLRRQLLAMYQEKQDTLEQVLEAKQ
Ga0318521_1081132913300031770SoilVRDVERAEAAYEQAIDKLDAEARPELKDPATPLLAGYREKLAVLDSAIAELKSQASINPGNGHLRRQLLAMYQEKQDTLEQVLEAKQ
Ga0318508_121758013300031780SoilRAVRNVEEKEAAYEAAIDKLDAEARPELDKASTPLMASYREKLQVLDSAIADLKAQAGMNPANGHLRRQLLAMYQEKQFTLEEVLEAKQP
Ga0318568_1024149223300031819SoilSASALWVIWHRNSDSIAGPLLTDRAVRNVEEKEAAYEAAIDKLDAEARPELDKASTPLMASYREKLQVLDSAIADLKAQAGMNPANGHLRRQLLAMYQEKQFTLEEVLEAKQP
Ga0318568_1030852213300031819SoilALLNNRTVREVERAEAAYEQAIDKLDAQARPELLNPSTPLLAGYREKLEVLDSAIAELKSQAGVNPANGHLRRQLLAMYQEKQETLEQVLEAKQ
Ga0307473_1082951323300031820Hardwood Forest SoilIDRLDAQARPQLEDFSAPLMANYREKLLVLDSAIADLKSQAGINPANGHLRRQLLAMYQEKQDTLEQVLEAKQ
Ga0318527_1025987623300031859SoilVEEKEAAYEAAIDKLDAEARPELDKASTPLMASYREKLQVLDSAIADLKAQAGMNPANGHLRRQLLAMYQEKQFTLEEVLEAKQP
Ga0306919_1031650713300031879SoilRTDREVERAEAAYEQAIDKLDAEARPELKDPATPLLAGYREKLAVLDSAIAELKSQASINPGNGHLRRQLLAMYQEKQDTLEQVLEAKQ
Ga0306919_1059559823300031879SoilAVWLVTRPADRSQNRALLNDRAVNEVERAQADYERAIDKLDAQARPQLENSPTPLMANYREKLLVLDSAIADLKSQAGTNPANGHLRRQLLAMYREKQDTLEQVLEVKQ
Ga0306923_1071691223300031910SoilAYEQAIDKLDAQARPELLNPSTPLLAGYREKLEVLDSAIAELKSQAGVNPANGHLRRQLLAMYQEKQETLEQVLEAKQ
Ga0306921_1026393133300031912SoilLFSNRTVREVERAEAAYEQAIDKLDAEARPELDKSAAPLLASYREKLAVLDSTIAELKSQTSINPGNGHLRRQLLAMYQEKQETLEQVLEAKK
Ga0310916_1047184513300031942SoilDQALLSNRTVRDVERAEAAYEQAIDKLDAEARPELKDPATPLVAGYREKLAVLDSAIAELKSQASINPGNGHLRRQLLAMYQEKQDTLEQVLEAKQ
Ga0307479_1042687123300031962Hardwood Forest SoilHTVREVEKAEAAYEQAIDKLDAQAGPQLENAATPLMASYREKLQVLDSAIADLKSQAGMNPGNGHLRRQLLAMYQEKQDTLEEVLEAKQ
Ga0318563_1034908023300032009SoilAVRNVEEKEAAYEAAIDKLDAEARPELDKASTPLMASYREKLQVLDSAIADLKAQAGMNPANGHLRRQLLAMYQEKQFTLEEVLEAKQP
Ga0318524_1079442613300032067SoilWQPAERKIPADQALLSNRTVRDVERAEAAYEQAIDKLDAEARPELKDPATPLLAGYREKLAVLDSAIAELKSQASINPGNGHLRRQLLAMYQEKQDTLEQVLEAKQ
Ga0306924_1080492423300032076SoilSQNRALLNDRAVHEVERAQADYERAIDKLDAQARPQLENSPTPLMANYREKLLVLDSAIADLKSQAGTNPANGHLRRQLLAMYREKQDTLEQVLEVKQ
Ga0307470_1017168123300032174Hardwood Forest SoilTTGKIPQDEALLKDSTVNEVERTEAAYERAIDKLDAQARPQLENSSAPLMANYREKLLVLDGAISDLKSQAGINPGNGHLRRQLLAMYQEKQDTLEEILEAKK
Ga0307471_10116919623300032180Hardwood Forest SoilAWFLRNPKTPPVEQNQTLLNDRAVNDVERAEAAYEQAIDKLDAQARPQLQNSSAPLMANYREKLLVLDSAIADLKSQASMNPANGHVRRELLAMYREKQDTLEQVLEAKQ
Ga0306920_10070434413300032261SoilSEKISADQALLNNRTVREVERAEAAYEQAIDRLDAQARPELLNASTPLLAGYREKLQILDSAIAELKSQAGVNPANGHLRRQLLAMYQEKQETLEQVLEAKQ
Ga0307510_1031303423300033180EctomycorrhizaTGFAVWYGGDRGRRDIPADQALLKDRAVSDVERAEAAYEQAIDKLELQARPQLENSASPLVANYREKLLVLDSAIADLKAQSGVNPANGHLRRELLAMYQEKQDTLEQVLEAKK
Ga0310914_1096153613300033289SoilYEQAIDRLDAQARPELLNASTPLLAGYREKLQILDSAIAELKSQAGVNPANGHLRRQLLAMYQEKQETLEQVLEAKQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.