NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F091484

Metagenome / Metatranscriptome Family F091484

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F091484
Family Type Metagenome / Metatranscriptome
Number of Sequences 107
Average Sequence Length 117 residues
Representative Sequence VDQLGPNALGEVLEPGRVADCYLGLLLAPGPAGEPEAGTILIVAPAALLHPRLPQPAGSLVYELLTGHPEREAGELVFVADLTGELRAWPHDTWTAVGVDPDQVAQAVIGC
Number of Associated Samples 71
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 0.93 %
% of genes from short scaffolds (< 2000 bps) 0.93 %
Associated GOLD sequencing projects 68
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.065 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(26.168 % of family members)
Environment Ontology (ENVO) Unclassified
(28.037 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.056 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204.206.208.
1JGI10216J12902_1087405582
2JGI25407J50210_100566181
3JGI25407J50210_101515371
4Ga0058697_100593322
5Ga0079217_103015251
6Ga0079218_126124251
7Ga0111538_140080271
8Ga0105249_114867142
9Ga0126307_100724524
10Ga0126307_111325991
11Ga0105076_11156321
12Ga0105068_10092653
13Ga0105068_10832451
14Ga0105058_11476991
15Ga0126313_100367631
16Ga0126313_103986542
17Ga0126315_100327274
18Ga0126315_101139461
19Ga0126315_109073791
20Ga0126308_103514031
21Ga0126308_112741431
22Ga0126312_107612351
23Ga0126312_113633562
24Ga0126314_106010612
25Ga0126310_103667792
26Ga0126311_108710681
27Ga0126306_100715123
28Ga0126306_100919962
29Ga0126306_103093662
30Ga0132258_121902392
31Ga0163161_118006281
32Ga0163161_120705021
33Ga0184634_103419081
34Ga0184638_10028972
35Ga0184623_100803662
36Ga0184625_101073724
37Ga0184639_106702131
38Ga0190269_119995451
39Ga0190268_106469391
40Ga0190270_104102863
41Ga0190270_120925852
42Ga0210378_102307011
43Ga0224452_10761372
44Ga0224452_12730991
45Ga0222623_101666222
46Ga0222622_103653891
47Ga0222622_104220562
48Ga0208710_1061281
49Ga0209846_10139662
50Ga0209842_10486841
51Ga0209874_10173962
52Ga0209795_100744251
53Ga0209889_10050463
54Ga0247822_104969751
55Ga0307293_102191802
56Ga0307285_100386812
57Ga0307311_100094032
58Ga0307311_100770811
59Ga0307301_102142171
60Ga0307301_102181921
61Ga0307315_101412541
62Ga0307319_102736601
63Ga0307318_100696212
64Ga0307320_100578962
65Ga0307320_100617962
66Ga0307320_101021233
67Ga0307288_103189211
68Ga0307290_100412493
69Ga0307290_100774851
70Ga0307292_101504261
71Ga0307302_101394792
72Ga0307296_106063291
73Ga0307312_108218901
74Ga0307312_111467051
75Ga0307289_100546661
76Ga0307278_100042025
77Ga0307277_100452241
78Ga0308187_103500611
79Ga0307405_100221894
80Ga0307405_107751241
81Ga0307405_112530141
82Ga0307405_115954881
83Ga0307413_110668312
84Ga0307413_118817981
85Ga0307410_118007211
86Ga0307410_119326652
87Ga0307406_116214691
88Ga0307406_119110301
89Ga0307406_120544221
90Ga0307407_111129022
91Ga0307412_111494211
92Ga0307412_117480621
93Ga0307409_1001058193
94Ga0307409_1004943041
95Ga0307409_1006799961
96Ga0307409_1007710761
97Ga0307409_1020051181
98Ga0307416_1010714941
99Ga0307416_1017381652
100Ga0307416_1023867132
101Ga0307414_116099941
102Ga0307415_1000608862
103Ga0307415_1003329362
104Ga0307415_1024555061
105Ga0268251_102141241
106Ga0247829_110785031
107Ga0247830_114286291
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.07%    β-sheet: 10.79%    Coil/Unstructured: 79.14%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110VDQLGPNALGEVLEPGRVADCYLGLLLAPGPAGEPEAGTILIVAPAALLHPRLPQPAGSLVYELLTGHPEREAGELVFVADLTGELRAWPHDTWTAVGVDPDQVAQAVIGCSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
99.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Groundwater Sediment
Groundwater Sediment
Soil
Serpentine Soil
Agricultural Soil
Soil
Soil
Soil
Groundwater Sand
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Tabebuia Heterophylla Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Agave
4.7%4.7%26.2%15.9%2.8%7.5%24.3%2.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10874055823300000956SoilVDQFGPNALGENLEPGRVTDCYLGLLLPPSPAGEPEAGTVLVVAPAALLHPWVPRPASSLVYELLTGHPERELGELVFLADLAVELRAWPQDTWTKLGVDPK*
JGI25407J50210_1005661813300003373Tabebuia Heterophylla RhizosphereVHQLGPNALGELLEPGRVADCYLGLLLPPPPAGEPEAGTVLVVGPSSLLHPAVPQPPGSLVYELLTGHPEREPAELVFVVDLTVELRAWPNDTWTNLGVDPDQVAQAVVGXWRDGAVSGLQVDDLSFEEARSL
JGI25407J50210_1015153713300003373Tabebuia Heterophylla RhizosphereVDQLGPSALGEVLEPGRVADCYLGLLPPGPAGEPEAGLILIVGPAALLHPRVPQPSGSLVYALLTGHPEREPGELVFVADLTVELRAWPADTWGKVGVDPDQVAQAVV
Ga0058697_1005933223300005562AgaveVTQLGVNAHGEVLEPGRVPDCYLGLLLPPGPAGEPEAGTVLMVTPAGLLHPRVPQPAGSLIYELLTGHPERKAGDLVFLADLTGELRAWAQGHLAGSRRRPRAGRPGGHRLLAARRGRRAAGRRPQL*
Ga0079217_1030152513300006876Agricultural SoilVDQLGPNALGETLEPGRVGDCYLGLLLPPPPAGEPEAGTILILAPAALLHPRIPQPAGSLVYQLLTGHPEREAGELVFVADLTGELRAWPTDTWAKLSVDPDQVTRAVIGCWQDGEVTGLQVDD
Ga0079218_1261242513300007004Agricultural SoilMGLLGANAHGEILEPGRVADCYLGLLLPLPAPPAGELEAGTILIVAPAALLHPRIPEPAGSLIYELLTGHPEREAGELVFLADLTCELRAWPHDTWSRLGVDPQAAARAVVAGWQRGDLLGLQLGELTAEEALAMERP
Ga0111538_1400802713300009156Populus RhizosphereVTGRGRHRVEWLGSDAFGQVLDPGRVGDCYLGLLLPPPPAGEPEAGQVLVVGPAALLHPHVPQPAGSLVYELLTGHPEREAHELVFLTDLTVELRAWPRDSWAAVGVDPDAVAHAVLACWRRGEVQGLAFEGVTFEEARALERPAM
Ga0105249_1148671423300009553Switchgrass RhizosphereVDQLGPNALGETLEPGRVADCYLGLLLPPGPAGEPEAGTVLIVGPAALLHPGVPQPAGSLVYALLTGHPEREPGELVFVADLTGELRVWPQDTWTAVGVDPDQVAQAVIGCWQDGEVTGLQIDDLGFEEARSLTRPAMTSV
Ga0126307_1007245243300009789Serpentine SoilVDQLGPNALGETLEPGRVTDCYLGLLLPPGPVGEPEAGTILIVAPAALLHPRVPQPDGSLVYGLLTGHPKREAGELVFVADLTGELRAWPDDTWAKLGVDPDQVTQ
Ga0126307_1113259913300009789Serpentine SoilVDQLGPNALEEVLEPGRVGDCYLGLLLPPGPAGEPEAGTILIVAPATLLHPRIPQPSGSLVYQLLTGHPEREAGELVFVVDLTCELRAWPTDTWAKVGVDSE*
Ga0105076_111563213300009816Groundwater SandLGLLLPPPPAGEPEAGTILIVGPGTLLHPGVPQPAGSLVYELLTGHPEREPGELVFVADLTCELRAWPTDTWTKIDVDPDQVAQAVIGCWRDGEVTGLRVDALNLEEARSLTRRR*
Ga0105068_100926533300009836Groundwater SandVTLQPGRVTDCYLGLLLPPPPAGEPEAGSVLVVAPAALLHPGVPQPAGRTVYELVTGHPEREPGELVFLADLDGDLRALPDGSWETLGVAPDAVAAAVVARWR
Ga0105068_108324513300009836Groundwater SandVDQFGPNALGETLEPGRVTDCYLGLLLPPGPAGEPEAGTVLVVAPAALLHPGVPQPAGSLVYELLTGHPERVPGELVFVADLTGELRAWPKDTWTAVGVDPGQVA
Ga0105058_114769913300009837Groundwater SandVDQLGPNALGEVLEPGRVADCYLGLRLPPGPTGEPEAGTVLIVAPAALLHPGVPQPAGSLVYQLLTGHPEREPGDLVFVADLTVELRAWPQDTWTAVGVDPDQ
Ga0126313_1003676313300009840Serpentine SoilVDQLGPNALGEVLEPGRVTDCYLGLLLPPGPAGEPEAGTILIVAPAALLHPRVPQPEGSLVYALATGHPERQAGELVFVADLTGELRAWPQDTWAELGVDPD*
Ga0126313_1039865423300009840Serpentine SoilVDSFGPNALGETLEPGRVADCYLGLLLPPGPAGEPEAGTVLVVAPAALLRPGVAQPAGSLLYELLTGHPEREPGELVFLADLTMELRAWPKDTWTKLGVDPDQVAQAVISCWQAGEIAGLQVDDLSWRRPARSPGRR*
Ga0126315_1003272743300010038Serpentine SoilVDQLGPNALGEVLEPGRVTDCYLGLLLPPGPAGEPEAGTILIVAPAALLHPRVPQPEGSLVYALVTGHPERQAGELVFVADLTGELRAWPQDTWAELGVDPD*
Ga0126315_1011394613300010038Serpentine SoilVDQLGPNALSEVLEPGRVPDCYLGLLLPPGPAGEPEAGTILIVAPAALLHPRVPQPAGSLIYELLTGHPEREAGELVFLADLTCALRAWPQDTWAKVGVDPGQVTQAIIGCWHDGEVT
Ga0126315_1090737913300010038Serpentine SoilVDQLGPNALGQVLEPGRVADCSLGLLLSPGPAGEPEAGTILILAPAALLHPRVPQPDGSLIYALLTGHPEREAGELVFVADLTGELRAWPHDTWAKLGVRS*
Ga0126308_1035140313300010040Serpentine SoilVDQLGPNALGEVLKPGRVADCYLGLLLPPGPAGEPEAGTVLIVAPAALLHPRVPQPAGTLVYGLLTGHPERDAGELVFMADLTGELRAWPHDTWAKLGVDPD
Ga0126308_1127414313300010040Serpentine SoilVNQLGPNALGDVLEPGRVADCYLGLLLPPGPAGELEVGIVLVVAPAALLHPRVPQPAGSLVCELLTGHPEREASELVFVADLTGELRAWPHDTW
Ga0126312_1076123513300010041Serpentine SoilVDQLGPNALGEVLEPGRFADCYLGLLLPPGPAGEPEAGTVLVIGPAALLHPRVPQPAGSLIYALLTGHPEREPGQLVFLADLTGELRAWPTDTWAKLGVDLDEVA*
Ga0126312_1136335623300010041Serpentine SoilVDQLGPNALGETLEPSRVGDCFLGLLLPPGPVGEPEAGTVLIVAPAALLHPRVPQPEGSLVYALLTGHPERKADELVFVADLTRELHAWPQDSWAKLGMDPDQV
Ga0126314_1060106123300010042Serpentine SoilVDQLGPSALGEVLEPGRVADCYLGLLLPPGPAGEPEAGTILIVAPAALLHPRVPQPHGSLVYELVTGHPEREPGELVFVADLTGELRAWPHDTWATVGVDPDQFAQAVIGCWQDGDV
Ga0126310_1036677923300010044Serpentine SoilVDQLGPNALGQVLEPGRVADCSLGLLLSPGPAGEPEAGTILILAPAALLHPRVPQPDGSLIYALLTGHPEREAGELVFVADLTGELRAWPTDTWAKLDVGPQAAAGGVIAAWRGGHVKG
Ga0126311_1087106813300010045Serpentine SoilVDQLGPNALGETLEPGRVGDCYLGLLLPPPPAGEPEAGTILILAPAALLHPRIPQPAGSLVYQLLTGHPEREAGELVFVADLTGELRAWPQDTWTEVGVDPDQVTQAVVGCWQDGEVTGLQVDDLGLEEARSLTPGRR*
Ga0126306_1007151233300010166Serpentine SoilVDQLGPNALGETLEAGRVGDCHLGLLLPPGPAGEPEPGTVLVVTPVVLLHPGVPQPAGSLVYELLTGHPEREPGELVFVGDLTVELRAWPKDTWTKLGIDPDQVAQAVIGCWQTGKVTGLQVDDLSVEEAARSPDRR*
Ga0126306_1009199623300010166Serpentine SoilVLGETLELGRVADCYLGLLLPPGPAGEPEAGSAVVVAPAALLHPRIPQPAGSLVYQLLTGHPEREPGELVFVVDLTCELRAWPKDTWAAVGVDPEQVAQAVIGCWQEGEVTGLQIDDLSFEEAAPSPGRRWAMSAASSAAA*
Ga0126306_1030936623300010166Serpentine SoilVDQLGPNALGEVPESGRVADCYLGLLLPPGPVGEPEAGTILIVAPAALLHPRVPEPAGSLVYDLLTGHPEREAGELVFVADLTGELRAWPTDTWAKLGVDPDQVAQAVVGCW*
Ga0132258_1219023923300015371Arabidopsis RhizosphereVDQLGPNALGEVLEPGRVADCYLGLLLAPGPAGEPEAGTILIVAPAALLHPRLPQPAGSLVYELLTGHPEREAGELVFVADLTGELRAWPHDTWTAVGVDPDQVAQAVIGC*
Ga0163161_1180062813300017792Switchgrass RhizosphereVFQLGQNALGEVLEPGRVTDCYLGLLLPPPPAGEFEAGTVLVVAPAALLHSRVPEPAGSLIYALLTGHPEREAGEVVFVTDLTGELRAWPHDTWAKVG
Ga0163161_1207050213300017792Switchgrass RhizosphereMDQLGPNALGEVLEPGRVADCYLGLLLPPGPAGEPEAGTILVVAPAAMLHPRVPQPDGSLVYELVTGHPEREAGELVFVADLTGELRAWPHDTWAKLGVDPDQVALAVIGCWQAGEVSGLQVDD
Ga0184634_1034190813300018031Groundwater SedimentILESGRVPDCYLGLLLPPGPAGELEAGTVLVVAPAALLHPGVPQPAGSLVYALLTGHPEREPGELVFVADLTVELRAWPTDTWARVGVDPEQVALAGTASGSAPHELPCPQ
Ga0184638_100289723300018052Groundwater SedimentMDQFGPNALGETLVPGRVTDCYLGLLLPPGPAGELEAGTVLVVAAAALLHPGVPQPAGSLVYALLTGHPEREPGELVFLADLAMELRAWPNDTWTAVGVDPDQVAQAVVGR
Ga0184623_1008036623300018056Groundwater SedimentVSELGPNAYGEVLDPGRVADCYLGLLLPPPPAGEPEAGRVLMVAPRALLHPRVPQPAGSLVYELVTGHPDREPGELVFLADLAVELRAWPAEPWAGLGWIRPLTPAR
Ga0184625_1010737243300018081Groundwater SedimentVDQLGPNALGEALEPGRVPDCYLGLLLPPGPAGEPEAGTILILAPASLLHPRVPQLAGSLIYELLTGHPEREPGEPVFVADLTGELRAWPQDTWAKVGVDPDQVAQAVIGCWQDG
Ga0184639_1067021313300018082Groundwater SedimentVDQLGPNALGEVLEPGRVADCYLGLLLPPGPAGEPEAGTILVVAPAALLHPRVPQPEGSLVYELLTGHPEREAGELVFVADLTGELRAWPQDTWAKLGVDPDRVALAVVGCWQGGEVSGVQVDDLG
Ga0190269_1199954513300018465SoilMDQLGPNALGEVLEPGRVADCYLGLLLPPGSAGEPEAGTILIVTPPALLHPGVPQPTGSLVYELLTGHPEREAGELAFVADLTGELRAWPQDTWAKVGVDPQQVAQAVIGCWQNGQVTG
Ga0190268_1064693913300018466SoilVDQFGPNAFGETLEPGRVADCYLGLLLRPGPAGEPEAGTVLVVAPAVLLHHRVPQPAGSLLYALLTGHPEREPGELVFVADLTVELRAWPNDTWTAVGVDPDQVT
Ga0190270_1041028633300018469SoilVDQLGPNALGEVLEPGRVADCYLGLLLPPGPAGEPEAGTILILAPATLLHPRIPQPAGSLVYQLLTGHPKREAGELVFVADLTCELRAWPTDTWARVDVDPEQVAQAVIGCWQDGEVTGLQLDDLSFEEARSLAGPAM
Ga0190270_1209258523300018469SoilVDQLGPNALGEVPESGRVTDCYLGLLLPPGPVGEPEAGTVLIAAPAALLHPRVSQPAGSLVYDLLTGHPEREAGELVFVADLTGELRAWPTDTWAKL
Ga0210378_1023070113300021073Groundwater SedimentVPDCYLGLLLPSGPAGEPEAGMVLVVAPVVLLHPGVPQPAGSLVYALLTGHPEREPGELVFVADLTVELRAWPTDTWARVGVDPEQVALAGTASGSAPHELPCPQ
Ga0224452_107613723300022534Groundwater SedimentVDQLGPNAVGETLEPGRVTNCYLGLLLPPGPAGEPEAGTVLIVIPAALLHLLVPQPAGSLIYKLLTGHPEREASELVFLADLTGELRAWPQDTWAK
Ga0224452_127309913300022534Groundwater SedimentETLEPGRVPDCYLGLLLPSGPAGEPEAGMVLVVAPVVLLHPGVPQPAGSLVYALLTGHPEREPGELVFVADLTVELRAWPTDTWARVGVDPEQVALAGTASGSAPHELPCPQ
Ga0222623_1016662223300022694Groundwater SedimentVDQLGPNALGEVLEPGRVADCYLGLLLPPGSAGEPEAGTILVVAPAALLHPRVPQPEGSWVYGLLTGHPEREAGELVFVADLTGELRAWPHDTWAKL
Ga0222622_1036538913300022756Groundwater SedimentVDQLGPNALGEVLEAGRVADCYLGLLLPPGPAGEPEAGTILVVAPAALLHPRVPQPEGSLVYELLTGHPEREAGELVFVADLTGELRAWPQDTWAK
Ga0222622_1042205623300022756Groundwater SedimentVDQLGPNALGEVLEPGRVADCYLGLLLPPGSAGEPEAGTILVVAPAALLHPRVPQPEGSWVYGLLTGHPEREAGELVFVADLTGELRAWPHDTWAKLGVDPDQVAQAVIGCWRDGEVSGLQVDDLSFEEARS
Ga0208710_10612813300026790SoilVDQFGPNALGETLEPGRVADCYLGLLLPPGPAGEPEAGTVLVLAPAALLHPGVPQPAGSLVYELLTGHPEREAGELVFLADLTCELRAWPQDTWAKVGVDPDQVAQAVIGCWQDDEVTGLQIDDLASRRPNRSPARR
Ga0209846_101396623300027277Groundwater SandVDHLGANALGEVLEPGRVADCYLGLLLPPPPAGEPEAGTILIVGPGTLLHPGVPQPAGSLVYELLTGHPEREPGELVFVADLTCELRAWPTDTWTKIDVDPDQVAQAVIGCWRDGEVTGLRVDALNLEEAR
Ga0209842_104868413300027379Groundwater SandVDQLGPNALGEVLEPGRVADCYLGLRLPPGPTGEPEAGTVLIVAPAALLHPGVPQPAGSLVYELLTGHPEREPGELVFVADLTVELRAWPKDTWTAVGVDPDQVAQA
Ga0209874_101739623300027577Groundwater SandVDQLGPNALGETLEPGRVADCYLGLLLPPGPAGEPEAGTILIVGPAALLHPAVPQPAGSLVHDLLTGHPDREAGELVFVADLTCELRAWPQDTWAKVGVDPEQV
Ga0209795_1007442513300027718AgaveVTQLGVNAHGEVLEPGRVPDCYLGLLLPPGPAGEPEAGTVLMVTPAGLLHPRVPQPAGSLIYELLTGHPERKAGDLVFLADLTGELRAWPKDTWPAVGVDSEQVAQAV
Ga0209889_100504633300027952Groundwater SandVDHLGANALGEVLEPGRVADCYLGLLLPPPPAGEPEAGTILIVGPGTLLHPGVPQPAGSLVYELLTGHPEREPGELVFVADLTCELRAWPTDTWTKIDVDPDQVAQAVIGCWRDGEVTGLRVDALNLEEARSLTRRR
Ga0247822_1049697513300028592SoilVDQLGPNALGEFLEPGRVADCYVGLQLPPGPAGELEAGTVLIVAPAALLHPRVPQPEGSLVYELVTGHPEREAGELVFVADLSGELRAWPHDTWAKLGVDPDQFAQAVIGCWQDGE
Ga0307293_1021918023300028711SoilVDQLGPNALGETLEPGRVADGYLGLLLPPGPAGEPEAGTVLIVSPSTLLHPGVPQPAGSLVYELLTGHPEREPGELVFVADLTCELRVWPQDTWAKVGVDPDQVAQAVVGCWRDGQVTGLQVDDLSFEEARSLTR
Ga0307285_1003868123300028712SoilVDQLGPNAVGETLEPGRVTNCYLGLLLPPGPAGEPEAGTVLIVIPAALLHLLVPQPAGSLIYKLLTGHPEREASELVFLADLTGELRAWPQDTWTKLDVDPDQVAQAVIDCWQDGEVTGLQVDDLSSEEARS
Ga0307311_1000940323300028716SoilVDQLGPNALGEVPESGRVTDCYLALLLPPGPAGEPEAGTVLIVGPAALLDPRVPQPEGSLVYALLTGHPEREAGELVFVADLTGELRAWPHDTWAKLGVDPDQVAQAVIGCWQDGEVTGF
Ga0307311_1007708113300028716SoilMDQLGPNALGEVLEPGRVADCYLGLLLPPGSVGEPEAGTVLVVGPAALLHPRVPQPAGSLVYELLTGHPEREAGELVFVADLTCELRAWPQDSWAKVGVDPDQVA
Ga0307301_1021421713300028719SoilVDQLGPNAVGETLEPGRVTNCYLGLLLPPGPVGEPEAGTVLIVIPAALLHLLVPQPAGSLIYKLLTGHPEREASELVFLADLTGELRAWPQDTWTKLDVDPDQVAQAVIDCWQDGEVTGLQVDDLSSEEARSLTRP
Ga0307301_1021819213300028719SoilVDQLGPNALGEVLEPGRVADCYLGLLLPPGSAGEPEAGTILVVAPAALLHPRVPQPEGSWVYGLLTGHPEREAGELVFVADLTGELRAWPHDTWAKLGVDPDQVAQAVIGCWQDGEVTGFQVD
Ga0307315_1014125413300028721SoilVDQLGPNAVGETLEPGRVTNCYLGLLLPPGPAGEPEAGTVLIVIPAALLHLLVPQPAGSLIYKLLTGHPEREASELVFLADLTGELRAWPQDTWAKLDVDPDQV
Ga0307319_1027366013300028722SoilVDQLGPNALGEVLEPGRVADCYLGLLLPPGSAGEPEAGTILVVAPAALLHPRVPQPEGSLVYALLTGHPEREAAELVFVTDLTGELRAWPQDTWAKLGVDPDQV
Ga0307318_1006962123300028744SoilMVWPEQAPEVNGLLSRGSLMPHLSPAPGTAPVELLGPNANGELLQPGRVADCYLGLLLPPPPAGEPEAGTVLIVAPAALLHLSVPQPAGSLLYELLTGHPDRQPGELVFLADLTCELRAWPNGTWATLGIDPVMVAQAVIRCWQDGHLNGRQFDELDFEEAR
Ga0307320_1005789623300028771SoilVDQLGPNALGEALEPGRVADCYLGLLLPPPPAGELEAGTVLVVAPAALLHPAIPQPAGSLVYELLTGHPEREAGELVFVADLTGELRAWPHDTWAKLGVDPGQVTQAIISCWQDGQVTGLQLDDLSF
Ga0307320_1006179623300028771SoilVGLLGPNANGQLLQPGRVADCYLGLLVPPGLVGEPEAGTVLIVAAAALLHPRVPQPAGSLVYELLTGHPEREPAELVFLVDLTAELRAWPQDTWTAVGIEPDQVAKAVVGCWRDGEVTGL
Ga0307320_1010212333300028771SoilVDQFGPNAFGETLEPGRVADCYLGLLLRPGPAGEPEAGTVLVVAPAVLLHHRVPQPAGSLLYALLTGHPEREPGELVFVADLTVELRAWPNDTWTAVGVDPDQI
Ga0307288_1031892113300028778SoilMDQLGPNALGEVLEPGRVADCYLGLLLPPGSVGEPEAGTVLVVGPAALLHPRVPQPAGSLVYELLTGHPEREAGELVFVADLTCELRAWPQDSWAKVGVDPDQVAQAVIGCWHDGEATGPQVD
Ga0307290_1004124933300028791SoilVDPLGPNTLGEVLEPGRVADCYLGLLLPPPHAGELEAGTILVVSPAALLHPRVPQTDGSLVYGLLTGHPEREAGELVFVADLTGELRAWPHDTWAKLGVDPDQVAEAVVGCWRDGEVTGLQVDDLGFEEARSL
Ga0307290_1007748513300028791SoilVDQLGPNALGETLEPGRVADCYLGLLLPPGPAGELEAGTVLVVAPAALLHPAVPQPAGSLVYELLTGHPEREPGELVFVADLTGELRVWPHDTWTAAGVDPDQVGQAVIGCWQDGEVTGLQVDDLGFEEARSLPGRR
Ga0307292_1015042613300028811SoilVDQLGPNALGEVLEPGRVADCYLGLLLPPGSAGEPEAGTILVVAPAALLHPRVPQPEGSWVYGLLTGHPEREAGELVFVADLTGELRAWPHDTWAKLGVDPDQVAQAVIGCWQA
Ga0307302_1013947923300028814SoilVDQLGPNALGESLEPGRTNNCYLGLLLPPPPAGELEAGTVLVVAPAALLHPRVPQPSGSLTYELLSGHPEREPGELVFMADMTIELRAWPQDTWAKLGVD
Ga0307296_1060632913300028819SoilMDQLGPNALGEVLEPGRVADCYLGLLLPPGSVGEPEAGTVLVVGPAALLHPRVPQPAGSLVYELLTGHPEREAGELVFVADLTCELRAWPQDSWAKVGVDPDQVAQAVIGCWHDGEATGP
Ga0307312_1082189013300028828SoilVDQLGPNALGEVLEPGRVADCYLGLLLPPGSAGEPEAGTILVVAPAALLHPRVPQPEGSWVYGLLTGHPEREAGELVFVADLTGELRAWPHDTWAKLGVDP
Ga0307312_1114670513300028828SoilVDELGPNALDQVLEPGRVPDCYLGLLLPPGPAGEPEAGTVLVVAPAGLLHPRVPQPDGSLVYALLTGHPEREAAELAFVADLTGELRAWPQDTWAKIGVDPDQVAQAVVGCWEDGEVTGL
Ga0307289_1005466613300028875SoilVDPLGPNTLGEVLEPGRVADCYLGLLLPPPHAGELEAGTILVVSPAALLHPRVPQTDGSLVYGLLTGHPEREAGELVFVADLTGELRAWPHDTWAKLGVDPD
Ga0307278_1000420253300028878SoilVDQLGPKALGEVLEPGRVADCYLGLLLPPPPAGEPEAGSVLVVSPAAVLHPRVPQPAGSLIYQLLTGHPEREPGELVFVADLTGELRAWPQDSWAKLGVDPEQVAQAVVGCYGTVR
Ga0307277_1004522413300028881SoilVDPLGPNTLGEVLEPGRVADCYLGLLLPPPHAGELEAGTILVVSPAALLHPRVPQTDGSLVYGLLTGHPEREAGELVFVADLTGELRAWPHDTWAK
Ga0308187_1035006113300031114SoilVDQFGPNAFGETLEPGRVADCYLGLLLPPGPAGEPEAGTVLIVAPAVLLHHRVPQPAGSLLYALLTGHPEREPGELVFVADLTVELRAWPNDTWAKLGVDPDQVAQAVIGCWQDG
Ga0307405_1002218943300031731RhizosphereVDHLGPNGLGEVLEPGRVADCHLGLLLPHGPAGEPEAGTVLVVAPAALLHPGVPQPAGSLVYELLTGHPEREPGELVFVADLTGELRAWPQDTWTEVGVDPDQVTQAVVGCWQDGEVTGLQVDDLGLEEARSLTPGRR
Ga0307405_1077512413300031731RhizosphereVDQLGPNALGEVLEPGRVADCYLGMELLPPGPAGEPEAGTILIVGPAALLHPAVPQPAGSLIPEREPGELVFVADLIVELRAWPQDTWAKVGVDPDQVTQAVLGCWQGEQVSGLQVDDLGLEEARSLTRPAMT
Ga0307405_1125301413300031731RhizosphereMDQLGPNALGEVLEPGRVADCYLGLLLPPGSVGEPEAGTVLVVGPAALLHPRVLQPAGSLVYELLTGHPEREAGELVFVADLTCELRAWPHDSWAKLGVDPDQVAQAVIGCWQDGEATGL
Ga0307405_1159548813300031731RhizosphereVDQLGPNALGETLEPGRVGDCYLGLLLPPGPAGEPEAGTILIVAPATLLHPRIPQPAGSLVYQLLTGHPEREAGELVFVADLTYELRAWPTDTWAMVGVDPDHIAQAVTSWWQDGEVTGLQVDDHGFEEARSLTRPAM
Ga0307413_1106683123300031824RhizosphereVGTDQFSPNALGETLEPGRVADCYLGLLLPPGPAGEPEAGTVLIVTPAALLHPDVPQPAGSLVYELLTGHPEREPGELVFVADLTVELRAWPQDTWTAIGIDPEQVAQAVIGCWRDGEVTGLQVDDLSFEEAY
Ga0307413_1188179813300031824RhizosphereVDQLGPNALGETLEPGRVGDCYLGLLLPPPPAGEPEAGTILILAPAALLHPRIPQPAGSLVYQLLTGHPEREAGELVFVADLTGELRAWPTDTWAKLGVAPDQVTRAVIGCWQDGEVTGLQVDDLGLEEARS
Ga0307410_1180072113300031852RhizosphereVDQLGPNALGQVLEPGRVADCSLGLLLSPGPAGEPEAGTILILAPAALLHPRVPQPDGSLIYALLTGHPEREAGELVFVADLTGELRAWSTDTWAKLGVAPDQVAQAVIGCWQAGEVSGLQVDDLDFEEAR
Ga0307410_1193266523300031852RhizosphereVDQLGLNALGEVLEPGRVADCYLGLLLPLGPAGEPEAGTVLIVAPAGLLHPRVPQPDGGLVYGLLTGHPEREAGELVFVADLTGELRAWPTDTWAKLG
Ga0307406_1162146913300031901RhizosphereVDQLGPNALGETLAPGRVTDCYFGLLVPPGPVGEPEAGTVLVVAPAVLLHPRVPQPAGSLIYELLTGHPEREPGELVFMADLTGELRAWPQDTWAKVGVDPRPGRQGGHRLLARRGGHRVPG
Ga0307406_1191103013300031901RhizosphereVDSFGPNALGETLEPGRVADCYLGLLLPPGPAGEPEAGTVLVVAPAALLRPGVAQPAGSLLYELLTGHPEREPGELVFLADLTMELRAWPKDTWTKLGVDPDQVAQAVISCWQAGEIAGLQVD
Ga0307406_1205442213300031901RhizosphereVDQLGRNAFGEVLEPGRVADCYLGLLLPPGPAGELEAGTVLVVAPAALLHPGVPQPAGSLVYKLLTGHPEREAGELVFVAHLTGELRAWPHDTWAKIGVDPQQVAQAVIGCWQDGEVTGLQVDDLSFEEARSLTRP
Ga0307407_1111290223300031903RhizosphereVDQLGPNALGQVLEPGRVADCSLGLLLSPGPAGEPEAGTILILAPAALLHPRVPQPDGSLIYALLTGHPEREAGELVFVADLTGELRAWPTDTWAKLGVAPDQV
Ga0307412_1114942113300031911RhizosphereVDQLGPNALGEVLEPGRVADCYLGLLLPPGSAGELEAGTVLIVAPAALLHPRVPQPDGSMVYELLTGHPERDAGELVFVADLTGELRAWPHDTWAKLGVDPDQVAKAV
Ga0307412_1174806213300031911RhizosphereVDQFGPNAFGETLEPGRVADCYLGLLLRPGPAGEPEAGTVLVVAPAVLLHHRVPQPAGSLLYALLTGHPEREPGELVFVADLTVELRAWPNDTWTAVGVDPDQVTQAVIGCWQDAEVTGLQVDDLS
Ga0307409_10010581933300031995RhizosphereGLGEVLEPGRVADCHLGLLLPHGPAGEPEAGTVLVVAPAALLHPGVPQPAGSLVYELLTGHPEREPGELVFVADLTGELRAWPQDTWTEVGVDPDQVTQAVVGCWQDGEVTGLQVDDLGLEEARSLTPGRR
Ga0307409_10049430413300031995RhizosphereVDQLGPNARGETLEPGRVADCYLGLLLPPGPAGEPEAGTILILAPAALLHPRVPQPEGSLLYELLTGHPEREASELVFVADLADELRAWPQDTWAKL
Ga0307409_10067999613300031995RhizosphereVDQFGPNALGETLEPGRAGDCYLGLLLPPGPAGEPEAGTVLVVAPAALLHPDVPQPAGSLVYELVTGHPEREPGELVFVADLTVELRAWPPDTWTAIGIDPEQVAQAVIGCWRDGE
Ga0307409_10077107613300031995RhizosphereVDQLGSNALGEVLQPGRVTDCYFGLLLPPPPAGEPEAGTVLVVAPGALLHPRVPQPAGSLIYELLTGHPERAPDELVFMADLTDELRAWPHDTWVKVGVDPDQVALAVIGCWQNGEATGVQLDDLSFEEARSLTRPA
Ga0307409_10200511813300031995RhizosphereVDQLGPNALGEVLEPGRVGDCYLGLLLPPGPAGEPEAGTILIVAPATLLHPRIPQPAGSLVYQLVTGHPEREAGELVFVADLTGELRAWPTDTWAKVDVDPEQVAQAVLGCWQDGEVPGLQLDDLSF
Ga0307416_10107149413300032002RhizosphereVDQLGPNALGEALEPGRVADCYLGLPLPPPLAGEPEAGTILIVGPSILLHPAVPQPAGSLIYALLTGHPEREIGELVFVADLTGELRAWPQDT
Ga0307416_10173816523300032002RhizosphereVDQLGPNARGETLEPGRVADCYLGLLLPPGPAGEPEAGTILILAPAALLHPRVPQPEGSLLYELLTGHPERDSGELVFVADLTGELRAWPQDTWAKLGVDPDQV
Ga0307416_10238671323300032002RhizosphereVDQFGPNALGEKLEAGRVADCYLGLLLPPGPAGEPEAGTVLIVAPAALLHPRIPRPAGSLVYALLTGHPEREPGELMFVADLTCELRAWPQDTWTKLGVDPEQAAQAVIGCWQAGEV
Ga0307414_1160999413300032004RhizosphereVDQFGPNALGETLEPGRAGDCYLGLLLPPGPAGEPEAGTVLVVAPAALLHPGVPQPAGSLVYAQLTGHPEREPGELVFMADLTGELRAWPQDTWAKVGVDPEQV
Ga0307415_10006088623300032126RhizosphereVDSFGPNALGETLEPGRVADCYLGLLLPPGPAGEPEAGTVLVVAPAALLRPGVAQPAGSLLYELLTGHPEREPGELVFLADLTMELRAWPKDTWTKLGVDPDQVAQAVISCWQAGEIAGLQVDDLSWRRPARSPGRR
Ga0307415_10033293623300032126RhizosphereVDQLGPNALGEVLEPGRVTDCYLGLLLPPGSAGEPEAGTILIFAPAALLHPHVPQPDGKLVYELLTGHPEREAGELVFVADLTGELRAWPHDTWAKLGVDPDQVAQ
Ga0307415_10245550613300032126RhizosphereVQQLGPNAFGETLESGRVADCYLGLLLPPPPAGEPEAGTVLIVAPATLLQPRVPQPAGSLLYELLTGHPERQPGELVFLADLTCELRGWPTGTWDSLGVDPQVVADAVIGCWRHGHLNGR
Ga0268251_1021412413300032159AgaveVTQLGVNAHGEVLEPGRVPDCYLGLLLPPGPAGEPEAGTVLMVTPAGLLHPRVPQPAGSLIYELLTGHPERKAGDLVFLADLTGELRAWAQGHLAGSRRRPRAGRPGGHRLLAARRGRRAAGRRPQL
Ga0247829_1107850313300033550SoilVDQPGPNALGEVLEPGRVADCYLGLLLPPGPAGELESGTVLILAPAVLLHPQVPQPEGSLVYELLTGHPEREAGELVFVADLTGELRAWPHNTWAKLGVDPDQVAQAVIGCWQDGQVTGFQVV
Ga0247830_1142862913300033551SoilVNQLGPNALGEVLEPGRVADCYLGLLLPPGSAGELEAGTVLVVAPAALLHPRIPQPAGSLVYELVTGHPEREAGELVFVADLTGELRAWPHDTWAKLGVDPQQVAQAVIGCWRDGEVTGLQVDDLSFEE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.