Metagenome / Metatranscriptome Family F091483

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091483
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	121 residues
Representative Sequence	MPQKLSSRQQAQVAFLELLPQKFQRIYSVIEQMAGPRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGMPMKVRGLRELQGSLKINYDAALRSATTPDRLAGEEAEDGPPV
Number of Associated Samples	91
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.19 %
% of genes near scaffold ends (potentially truncated)	42.06 %
% of genes from short scaffolds (< 2000 bps)	82.24 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.495 % of family members)
Environment Ontology (ENVO)	Unclassified (28.037 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.449 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.53% β-sheet: 0.00% Coil/Unstructured: 39.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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SCOP family	SCOP domain	Representative PDB	TM-score
a.24.10.3: Chemotaxis protein CheA P1 domain	d1i5na_	1i5n	0.7682
a.24.10.3: Chemotaxis protein CheA P1 domain	d1tqga1	1tqg	0.76444
e.32.1.1: Phase 1 flagellin	d1io1a_	1io1	0.74091
a.24.23.1: Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain	d1szia_	1szi	0.73406
a.24.12.0: automated matches	d7bmla_	7bml	0.73347

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00873	ACR_tran	33.64
PF00202	Aminotran_3	1.87
PF09694	Gcw_chp	1.87
PF16653	Sacchrp_dh_C	0.93
PF02321	OEP	0.93
PF13533	Biotin_lipoyl_2	0.93
PF00528	BPD_transp_1	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	81.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	81.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	79.44 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	79.44 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	79.44 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	79.44 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_14004731	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300004156\|Ga0062589_100472247	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300004157\|Ga0062590_101071576	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	774	Open in IMG/M
3300006876\|Ga0079217_10363398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	836	Open in IMG/M
3300006876\|Ga0079217_11338043	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	556	Open in IMG/M
3300006894\|Ga0079215_10154919	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300006918\|Ga0079216_11109941	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	625	Open in IMG/M
3300007004\|Ga0079218_10273037	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300009053\|Ga0105095_10309998	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	868	Open in IMG/M
3300009153\|Ga0105094_10204894	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300009176\|Ga0105242_11618809	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	682	Open in IMG/M
3300009789\|Ga0126307_10021313	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	4902	Open in IMG/M
3300009840\|Ga0126313_10017503	All Organisms → cellular organisms → Bacteria	4704	Open in IMG/M
3300009840\|Ga0126313_11482108	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	563	Open in IMG/M
3300010036\|Ga0126305_10030650	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2928	Open in IMG/M
3300010037\|Ga0126304_10024321	All Organisms → cellular organisms → Bacteria	3500	Open in IMG/M
3300010039\|Ga0126309_10070010	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1733	Open in IMG/M
3300010045\|Ga0126311_11564745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	554	Open in IMG/M
3300010166\|Ga0126306_10048536	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2931	Open in IMG/M
3300010399\|Ga0134127_10875822	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	951	Open in IMG/M
3300010400\|Ga0134122_10503721	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300011003\|Ga0138514_100022904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1134	Open in IMG/M
3300011332\|Ga0126317_10147046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	695	Open in IMG/M
3300011333\|Ga0127502_11123811	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1001	Open in IMG/M
3300012045\|Ga0136623_10187175	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	891	Open in IMG/M
3300012046\|Ga0136634_10298305	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	656	Open in IMG/M
3300012171\|Ga0137342_1112947	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	579	Open in IMG/M
3300012184\|Ga0136610_1338823	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	513	Open in IMG/M
3300012187\|Ga0136622_10155523	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	966	Open in IMG/M
3300012212\|Ga0150985_121923260	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	551	Open in IMG/M
3300012226\|Ga0137447_1102132	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	570	Open in IMG/M
3300012469\|Ga0150984_109567662	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300012529\|Ga0136630_1279741	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	595	Open in IMG/M
3300012530\|Ga0136635_10000139	All Organisms → cellular organisms → Bacteria	17129	Open in IMG/M
3300012684\|Ga0136614_10141385	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1823	Open in IMG/M
3300013100\|Ga0157373_11412603	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	529	Open in IMG/M
3300015079\|Ga0167657_1006218	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1751	Open in IMG/M
3300015209\|Ga0167629_1136235	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	698	Open in IMG/M
3300017789\|Ga0136617_10000332	All Organisms → cellular organisms → Bacteria	38676	Open in IMG/M
3300018028\|Ga0184608_10018202	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2512	Open in IMG/M
3300018051\|Ga0184620_10009828	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2142	Open in IMG/M
3300018054\|Ga0184621_10193373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	730	Open in IMG/M
3300018056\|Ga0184623_10006407	All Organisms → cellular organisms → Bacteria	5009	Open in IMG/M
3300018059\|Ga0184615_10085043	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1774	Open in IMG/M
3300018059\|Ga0184615_10548461	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	613	Open in IMG/M
3300018063\|Ga0184637_10681747	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	565	Open in IMG/M
3300018077\|Ga0184633_10347256	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	750	Open in IMG/M
3300018078\|Ga0184612_10237765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	942	Open in IMG/M
3300018079\|Ga0184627_10026138	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2911	Open in IMG/M
3300018422\|Ga0190265_10001965	All Organisms → cellular organisms → Bacteria	13624	Open in IMG/M
3300018422\|Ga0190265_10107169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2636	Open in IMG/M
3300018422\|Ga0190265_10771451	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1084	Open in IMG/M
3300018422\|Ga0190265_13671339	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	512	Open in IMG/M
3300018429\|Ga0190272_10151191	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1599	Open in IMG/M
3300018432\|Ga0190275_10201017	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1885	Open in IMG/M
3300018466\|Ga0190268_10306701	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	957	Open in IMG/M
3300018466\|Ga0190268_10584761	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300020059\|Ga0193745_1008437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2216	Open in IMG/M
3300021073\|Ga0210378_10041851	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1815	Open in IMG/M
3300021078\|Ga0210381_10196984	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	701	Open in IMG/M
3300021080\|Ga0210382_10184168	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	904	Open in IMG/M
3300021090\|Ga0210377_10280301	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1029	Open in IMG/M
3300022534\|Ga0224452_1012267	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2269	Open in IMG/M
3300022756\|Ga0222622_10197538	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1332	Open in IMG/M
3300025313\|Ga0209431_10512475	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	911	Open in IMG/M
3300025325\|Ga0209341_10526340	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	938	Open in IMG/M
3300025325\|Ga0209341_10608539	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300025325\|Ga0209341_11176520	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	546	Open in IMG/M
3300025327\|Ga0209751_10937268	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	661	Open in IMG/M
3300025795\|Ga0210114_1040874	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300027543\|Ga0209999_1103958	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	554	Open in IMG/M
3300027647\|Ga0214468_1076087	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	858	Open in IMG/M
3300027682\|Ga0209971_1108318	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	681	Open in IMG/M
3300027713\|Ga0209286_1318843	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	538	Open in IMG/M
3300027731\|Ga0209592_1246252	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	621	Open in IMG/M
3300028716\|Ga0307311_10078047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	907	Open in IMG/M
3300028717\|Ga0307298_10060331	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1048	Open in IMG/M
3300028787\|Ga0307323_10148889	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	845	Open in IMG/M
3300028791\|Ga0307290_10126560	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	935	Open in IMG/M
3300028793\|Ga0307299_10311570	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	591	Open in IMG/M
3300028803\|Ga0307281_10044900	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1373	Open in IMG/M
3300028824\|Ga0307310_10562447	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	579	Open in IMG/M
3300030006\|Ga0299907_10307790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1291	Open in IMG/M
3300030620\|Ga0302046_10320264	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300030990\|Ga0308178_1086940	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	645	Open in IMG/M
3300031058\|Ga0308189_10469067	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	536	Open in IMG/M
3300031114\|Ga0308187_10168374	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	744	Open in IMG/M
3300031229\|Ga0299913_11216832	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	713	Open in IMG/M
3300031421\|Ga0308194_10186143	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	663	Open in IMG/M
3300031424\|Ga0308179_1021396	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	714	Open in IMG/M
3300031548\|Ga0307408_100006810	All Organisms → cellular organisms → Bacteria → Proteobacteria	7579	Open in IMG/M
3300031548\|Ga0307408_100169042	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1744	Open in IMG/M
3300031731\|Ga0307405_10055775	All Organisms → cellular organisms → Bacteria	2475	Open in IMG/M
3300031824\|Ga0307413_10050453	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2500	Open in IMG/M
3300031852\|Ga0307410_10321655	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1227	Open in IMG/M
3300031852\|Ga0307410_10406850	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1101	Open in IMG/M
3300031852\|Ga0307410_10675983	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	868	Open in IMG/M
3300031852\|Ga0307410_11653129	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	567	Open in IMG/M
3300031901\|Ga0307406_10829394	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	782	Open in IMG/M
3300031901\|Ga0307406_11466315	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	600	Open in IMG/M
3300031903\|Ga0307407_10051464	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2361	Open in IMG/M
3300031908\|Ga0310900_11643956	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	544	Open in IMG/M
3300031911\|Ga0307412_10197810	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1524	Open in IMG/M
3300031995\|Ga0307409_102201228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	581	Open in IMG/M
3300032004\|Ga0307414_10423070	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1162	Open in IMG/M
3300032004\|Ga0307414_10455177	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300032004\|Ga0307414_11186730	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	706	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.44%
Host-Associated	Host-Associated	20.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.60%
Aquatic	Environmental → Aquatic	30.84%
Plants	Host-Associated → Plants	20.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.76%
Freshwater	Environmental → Aquatic → Freshwater	16.82%
Sediment	Environmental → Aquatic → Sediment	13.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.80%
Marine	Environmental → Aquatic → Marine	0.93%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.08%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.48%
Ice	Environmental → Aquatic → Freshwater → Ice	7.48%
Loam	Environmental → Terrestrial → Soil → Loam	4.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.87%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.93%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.08%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.48%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	7.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.54%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	4.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.87%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	14.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.35%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	7.48%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	4.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.87%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.87%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012171	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2	Environmental	Open in IMG/M
3300012184	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ134 (22.06)	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012226	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012529	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300015079	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)	Environmental	Open in IMG/M
3300015209	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_140047312	3300000363	Soil	MVQKLSSRQQAQVAYLELLAPKLQRIYSLVEQMAAPRVDEAVLRALGRMLDDIKGNATALSLSGLADTAGRMGMLVRSGGGMAPKVRGLRELHSSLKMNYDKALRTASTPEEEAAE*
Ga0062589_1004722472	3300004156	Soil	MAPKLSSRQQAQLAYLELLPQKLQRIYSVIEQMAAPRVDESLARVLGRLLDEIKGNAASLSMGTLADTAGRMGMVVRGGGGMPAKVRGLRELQGSLKISYDAALRAATTPEGGVEE*
Ga0062590_1010715762	3300004157	Soil	VAYLELLPQKLQRIYSVIEQMAAPRVDEALARALGRLLDDIKGNAASLSMGTLADTAGRMGMLVRGGGGMPAKVRGLRELQGSLKLSYDAALRAATTPEDGVGE*
Ga0079217_103633981	3300006876	Agricultural Soil	MASKLSSRQQAQVAFLELLPQKLQRIYSVIEQMAGPRVDEALVRGLGRMLDDIKGNAASLSLAGLADTAGRMGMLTRGGGGMAMRVRGLRELQGSLKINYDAALRSATTPDETAGDPDAGGPAHS*
Ga0079217_113380431	3300006876	Agricultural Soil	QTMAQKLSSRQQAQVAFLELLPQKFQRIYSVIEQMAGPRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGMPMKVRGLRELQGSLKINYDAALRSATTPERLAGEEAEDSPPG*
Ga0079215_101549193	3300006894	Agricultural Soil	MAPKLSSRQQAQVAFLELLPQKLQRIYSVIEQMAGPRVDEALVRGLGRILDDIKGNAASLSLAGLADTAGRMGMLTRGGGGMAMKVRGLRELQGSLKINYDAALRSATTPDETAGDPDAGGPAPS*
Ga0079216_111099412	3300006918	Agricultural Soil	MASKLSSRQQAQVAFLELLPQKLQRIYSVIEQMAGPRVDEALVRGLGRILDDIKGNAASLSLAGLADTAGRMGMLTRGGGGMAMKVRGLRELQGSLKINYDAALRSATTPDQTAGDPDAGPAPS*
Ga0079218_102730371	3300007004	Agricultural Soil	SRQQAQVAFLELLPQKLQRIYSVIEQMAGPRVDEALVRGLGRILDDIKGNAASLSLAGLADTAGRMGMLTRGGGGMAMKVRGLRELQGSLKINYDAALRSATTPDETAGDPDAGGPAHS*
Ga0105095_103099982	3300009053	Freshwater Sediment	MPPKLSSRQQAQLAYLELMPQKLQRIYSVVEQLASPRVDETLMRTLGRLVDDIKGNAASLSLGGLAETAGRMGMLVRGGGGLPTKVRGLRELQGSLKINYDAALRSATTPVGPGEEEPDTGGPPV*
Ga0105094_102048942	3300009153	Freshwater Sediment	MPPKLSSRQQAQLAYLELMPQKLQRIYSVVEQLASPRVDETLMRTLGRLVDDIKGNAASLSLGGLAETAGRMGMLVRGGGGLPTKVRGLRELQGSLKINYDAALRSATTPAGPGEEEPDTGGPPV*
Ga0105242_116188091	3300009176	Miscanthus Rhizosphere	MAPKLSSRQQAQVAYLELLPQKLQRIYSVIEQMAAPRVDEALARALGRLLDDIKGNAASLSMGPLADTAGRMGMLVRSGGGMPAKVRGLRELQGSLKLSYDAALRAATTPEDGVGE*
Ga0126307_100213134	3300009789	Serpentine Soil	MAPKLSSRQQAQLAYLELLPQKLQRIYSIVEQLAGARVDESLIRGLGRLLDEIKLNAAGLSLGGLADTAGRMAMLTRGGGGMPTKVRGLRELQGSLKINYDAALRVATTPGVDDGGEPPSAPAV*
Ga0126313_100175032	3300009840	Serpentine Soil	MAPKLSSRQQAQLAYLELLPQKLQRIYSIVEQLAGARVDESLIRGLGRLLDEIKLNAAGLSLGGLADTAGRMAMLTRGGGGMPTKVRGLRELQGSLKINYDAALRVATTPGVVDDGEPPPTAAG*
Ga0126313_114821082	3300009840	Serpentine Soil	MASKLSSRQQAQKAFLELLPPKMQRIYSVIEQMAGPRVDEALVRALGRILDDIKGNAASLSLGSLADTAGRMGMISRAGGGMAMKVRGLRELQGTLKINYDAALRSATTPDETAADSEGE
Ga0126305_100306502	3300010036	Serpentine Soil	MASKLSSRQQAQKAFLELLPPKLQRIYSVIEQMAGPRVDEALVRGLGRILDDIKGNAASLSLGSLADTAGRMGMMSRAGGGMAMKVRGLRELQGTLKINYDAALRMATTPDETAADSEGE
Ga0126304_100243212	3300010037	Serpentine Soil	VASKLSSRQQAQKAFLELLPPKLQRIYSVIEQMAGPRVDEALVRGLGRILDDIKGNAASLSLGSLADTAGRMGMMSRAGGGMAMKVRGLRELQGTLKINYDAALRMATTPDETAADSEGE
Ga0126309_100700102	3300010039	Serpentine Soil	MAQKLSSRQQAQVAFLERIAPRLPKIYSLVEQLAAPKVDETVLRALGRILEEIKGNASGLSLGPLAETAGRMVMLIRSGGVMAVKVRGLRELHGSLKTNYDAALRSASTPEVESVE*
Ga0126311_115647451	3300010045	Serpentine Soil	MASKLSSRQQAQKAFLELLPPKMQRIYSVIEQMAGPRVDQALVRALGKILNDIKGNAASLSLGSLADTAGRMGMISRAGGGMAMKVRGLRELQGTLKINYDAALRSATTPDETAADSEGE
Ga0126306_100485361	3300010166	Serpentine Soil	MAPKLSSRQQAQLAYLELLPQKLQRIYSIVEQLAGARVDESLIRGLGRLLDEIKLNAAGLSLGGLADTAGRMAMLTRGGGGMPTKVRGLRELQGSLKINYDAALRVATTPGVDDGGEPPSAPA
Ga0134127_108758222	3300010399	Terrestrial Soil	MAPKLSSRQQAQVAYLELLPQKLQRIYSVIEQMAAPRVDEALARALGRLLDDIKGNAASLSMGTLADTAGRMGMLVRGGGGMPAKVRGLRELQGSLKLSYDAALRAATTPEDG
Ga0134122_105037212	3300010400	Terrestrial Soil	VAYLELLPQKLQRIYSVIEQMAAPRVDEALARALGRLLDDIKGNAASLSMGPLADTAGRMGMLARGGGGMAARVRGLRELQGSLKISYDAALRAATTPEDGVGE*
Ga0138514_1000229042	3300011003	Soil	MAPNLSSRQQAQVAFLELLPQKLQRIYSLVERLALPKVDETTLRGLGRLLDDIKGNSAALSLSGLAETAGRMGMLVRGGGGMPMKVRGLRELNSSLKVNYDTALRRATTPGAEDSPEAEDSPDA*
Ga0126317_101470461	3300011332	Soil	PKLSSRQQAQLAYLELLPQKLQRIYSIVEQLAGARVDESLIRGLGRLLDEIKLNAAGLSLGGLADTAGRMAMLTRGGGGMPTKVRGLRELQGSLKINYDAALRVATTPGVDDGGEPPSAPAV*
Ga0127502_111238111	3300011333	Soil	KLSSRQQAQKAFLELLPPKMQRIYSVIEQMAGPRVDEALVRGLGRLLDDIKGNAASLSLGSLADTAGRMGMMSRAGGGMAIKVRGLRELQGTLKINYDAALRSATTPDETAADSEGE*
Ga0136623_101871752	3300012045	Polar Desert Sand	MALKLSSRQQAQLAYLQLLPQKLQRIYSVVEQLAAPRVDETLMRALGRLVDDIKGNAASLSLGPLAETAGRMSMVVRGGGGIPAKVRGLRELQGSLKINYDAALRVATTPGALEDEPPADGPTA*
Ga0136634_102983052	3300012046	Polar Desert Sand	MASKLSSRQQAQLAYLELLPPKFQRIYSIIEQMAGPRVDEALMRALGRLLDDIKGNSASLSLGNLADTAGRMAMLARGGGGVPMKVRGLRELQNSLKINYDAALRSATKAEGVPDDDPSDASPP*
Ga0137342_11129471	3300012171	Soil	MAPKLSSRQQAQLAYLTLLPPKLQRIYSVVEQLALPRVDETLMRALGRLVDDIKGNAASLSLAGLAETAGRMGMVVRGGGGVPTKVRGLRELQNSLKINYDAAMRSA
Ga0136610_13388232	3300012184	Polar Desert Sand	MASKLSSRQQAQLAYLELLPPKFQRIYSIIEQMAGPRVDESLMRALGRLLDDIKGNSASLSLGNLADTAGRMAMLVRGGGGLPTKVRGLRELQSSLKINYDAALRSATTAEGLDEEPDASPA*
Ga0136622_101555233	3300012187	Polar Desert Sand	MALKLSSRQQAQLAYLQLLPQKLQRIYSVVEQLAAPRVDETLMRALGRLVDDIKGNAASLSLGPLAETAGRMSMVVRGGGGIPAKVRGLRELQGSLKINYEAALRVATTPGALEDEPPASGPAA*
Ga0150985_1219232602	3300012212	Avena Fatua Rhizosphere	RTMVPKLSSRQQAQVAFLERIAPKIPRIYSLVEQLAGARVDETVLRALGRILEEIKGNAAGLSLGPLAETAGRMVMLIRSGGAMAVKVRGLWELHGSLKTNYDAALRSASTPEEESVE*
Ga0137447_11021322	3300012226	Soil	MASKLSSRQQAQVAYLEALPPKFQRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGQMPIKVRGLREMQVSLKTNYDAALRSATTPDGAGGEEPSEGGPLV*
Ga0150984_1095676622	3300012469	Avena Fatua Rhizosphere	MAPKLSSRQQAQVAFLERIAPRLPRIYSLVERLAAPKVDETVLRALGRILDEIKGNASGLSLGPLADTAGRMVMLIRSGGPMAVKVRGLRELHGSLKMNYDAALRSASTPEEESAEEEESAE*
Ga0136630_12797411	3300012529	Polar Desert Sand	KLQRIYSVVEQLAAPRVDETLMRALGRLVDDIKGNAASLSLGPLAETAGRMSMVVRGGGGIPAKVRGLRELQGSLKINYEAALRVATTPGALEDEPPASGPAA*
Ga0136635_100001397	3300012530	Polar Desert Sand	MATKLSSRQQAQLAYLQLLPQKLQRIYSVVEQLAAPRVDETLMRALGRLVDDIKGNAASLSLGPLAETAGRMSMVVRGGGGIPAKVRGLRELQGSLKINYDAALRVATTPGALEDEPPADGPTA*
Ga0136614_101413851	3300012684	Polar Desert Sand	MASKLSSRQQAQLAYLELLPPKFQRIYSIIEQMAGPRVDESLMRALGRLLDDIKGNSASLSLGNLADTAGRMAMLVRSGGGLPTKVRGLRELQSSLKINY
Ga0157373_114126031	3300013100	Corn Rhizosphere	MAPKLSSRQQAQVAYLELLPQKLQRIYSVIEQMAAPRVDETLARALGRLLDDIKGNAASLSMGTLADTAGRMGMLVRGGGGMPAKVRGLRELQGSLKLSYDAALRAATTPEDGVGE
Ga0167657_10062182	3300015079	Glacier Forefield Soil	MAIKLSSRQQAQLAYLELLPQKFARIYSVVEQMAGARVDETLARALGRLVDDIKGNAASLSLGGLADTAGRMGMLIRSGGGMPTKVRGLRELQGSLKINYDAALRSATTPEAPDSEEPSGGSPPA*
Ga0167629_11362351	3300015209	Glacier Forefield Soil	FTVSRSKVPMAPKLSSRQQAQLAYLTLLPPKFQRIYSVIEQLALPRVDETLMRALGRLVDDIKGNASSLSMAGLAETAGRMGMVVRGGGGMPTKVRGLRELQSSLKINYDAAMRVATTPGALDDEEPSAGSPPV*
Ga0136617_1000033213	3300017789	Polar Desert Sand	MASKLSSRQQAQLAYLELLPPKFQRIYSIIEQMAGPRVDESLMRALGRLLDDIKGNSASLSLGNLADTAGRMAMLVRGGGGLPTKVRGLRELQSSLKINYDAALRSATTAEGLDEEPDASPA
Ga0184608_100182024	3300018028	Groundwater Sediment	MASKLSSRQQAQAAYLGALPPKFQRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGGMPVKVRGLREMQSSLKSSYDAALRSATTPEGIEGEAPSESSPPV
Ga0184620_100098282	3300018051	Groundwater Sediment	MADKLSSRQQAQLAYLEVLPQKFKRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGGMPVKVRGLREMQSSLKSSYDAALRSATTPEGIEGEAPSESSPPV
Ga0184621_101933731	3300018054	Groundwater Sediment	MADKLSSRQQAQLAYLEVLPQKFKRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGGMPVKVRGLREMQSSLKSSYDAALRSATTPEGIEGEAPSE
Ga0184623_100064072	3300018056	Groundwater Sediment	MASKLSSRQQAQVAYLEALPPKFQRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGGMPIKVRGLREMQVSLKTNYDAALRSANTPDGPGGEEPSGSSLPV
Ga0184615_100850433	3300018059	Groundwater Sediment	MAPKLSSRQQAQLAYLELLPQKFQRIYSVVEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLIRSRGGLPIKVRGLREMQSSLKTNYDAALRSATTPGAPGEEEPSASRPPV
Ga0184615_105484611	3300018059	Groundwater Sediment	MPPKLSSRQQAQLAYLELMPQKLQRIYSVVEQLASPRVDETLMRTLGRLVDDIKGNAASLSLGGLAETAGRMGMLVRGGGGLPTKVRGLRELQGSLKINYDAALRSATTPDAPGGEEPDTGGPPV
Ga0184637_106817471	3300018063	Groundwater Sediment	HVLDSPSLRPQGTMASKLSSRQQAQVAYLEALPPKFQRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGQMPIKVRGLREMQVSLKTNYDAALRSANTPDGPGGEEPSGSSLPV
Ga0184633_103472561	3300018077	Groundwater Sediment	MASKLSSRQQAQLAYLEALPQKFQRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGGMPIKVRGLREMQGSLKTNYDAALR
Ga0184612_102377653	3300018078	Groundwater Sediment	MASKLSSRQQAQVAYLEALPPKFQRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGQMPIKVRGLREMQVSLKTNYDAALRSANTPDGPGGEEPSGSSLPV
Ga0184627_100261382	3300018079	Groundwater Sediment	MPPKLSSRQQAQLAYLQLLPQKFQRIYSVVEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLTRSGGGLPVKVRGLRELQASLKINYDAALRSATTPGGLGDDEPSEGGPPA
Ga0190265_100019652	3300018422	Soil	MAPKLSSRQQAQLAYLTLLPPKFQRIYSTIEQLALPRVDETLMRALGRLVDDIKGNAASLSMAGLAETAGRMGMVVRSGGGIPTKVRGLRELQGSLKINYDAAMRTATTPGALDEEEPSAGPPPV
Ga0190265_101071692	3300018422	Soil	MAPPKLSSRQQAQLAYLTLLPPKFQRIYSVVEQLALPRVDETLMRALGRLVDDIKGNAASLSMGPLAETAGRMGMVVRGGGGMPTKVRGLRELQGSLKINYDAAMRSATTPGALDGEEPSAGTPQA
Ga0190265_107714512	3300018422	Soil	MAIKLSSRQQAQLAYLQLLPPKFQRIYSVVEQLALPRVDETLMRALGRLVDDIKGNAASLSLGGLADTAGRMAMLVRGGGGIPTKVRGLRELQGSLKINYDAALRSASTPDAPGEEESPAGAPPV
Ga0190265_136713391	3300018422	Soil	MGSTYWFTMPPKLSSRQQAQVAYLELLPQKLQRIYSVVEQMASPRVDEALMRGLGRLLDDIKGNAASLSLAGLAETAGRMGMIVRGGGGMPTKVRGLRELQSSLKINYDAALRSAKPPEGLADDDPAAFALLTMVAWLGAAPVPLTL
Ga0190272_101511913	3300018429	Soil	MAPKLSSRQQAQLAYLGLLPQKFQRIYSVIEQMAAPRVDEALARGLGRLLDDIKGNAASLSMGPLSDTAGRMGMLVRSGGALPVKVRGLRELQGSLKINYDAALRAATTPEGVAEE
Ga0190275_102010174	3300018432	Soil	LDLPPILLTMPPKLSSRQQAQLAYLELLPQKLQRIYSVIEQMASPRVDEALIRGLGRLLDDIKGNATSLSLGGLADTAGRMGMLVRSGGGLPMKVRGLRELQGSLKINYDAALRSATTPGAFDAEEPSESGPPA
Ga0190268_103067013	3300018466	Soil	MPQKLSSRQQAQVAFLELLPQKFQRIYSVIEQMAGPRVDEALARGLGRLLDDTKGNAAALSLSGLADTAGRMGMLVRGGGGMPMKVRGLRELQGSLKINYDAALRSATTPGNLAGEEAEGSPPA
Ga0190268_105847612	3300018466	Soil	MASKLSSRQQAQVAYLELLPQKLQRIYSVIEQMAGPRVDEALVRGLGRMLDDIKGNAASLSLASLADTAGRMGMLTRGGGGMAMKVRGLRELQGSLKINYDAALRSATTPDETA
Ga0193745_10084371	3300020059	Soil	VAFLELLPQKLQRIYSLVERLALPKVDETTLRGLGRLLDDIKGNSAALSLSGLAETAGRMGMLVRGGGGMPMKVRGLRELNSSLKVNYDTALRRATTPEAGDSPDA
Ga0210378_100418512	3300021073	Groundwater Sediment	MASKLSSRQQAQVAYLEALPPKFQRIYSVIEQMASPRVDEALMRGLGRLLDDIRGNAASLSLGGLAETAGRMGMLVRSRGQMPIKVRGLREMQVSLKTNYDAALRSANTPDGPGGEEPSGSSLPV
Ga0210381_101969841	3300021078	Groundwater Sediment	MADKLSSRQQAQLAYLEVLPQKFKRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGGMPVKVRGLREMQSSLKSSYDAALRSATTPEGIEGE
Ga0210382_101841683	3300021080	Groundwater Sediment	HYGAARAEIQPRHRLAHVLNSPSLRPQGTMASKLSSRQQAQAAYLGALPPKFQRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGQMPIKVRGLREMQASLKSNYDAALRSATTPEGIDGEEPSGSSPPG
Ga0210377_102803012	3300021090	Groundwater Sediment	MAPKLSSRQQAQLAYLELLPQKFQRIYSVVEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLIRSRGGLPIKVRGLREMQSSLKTNYDAALRSATTPGAPGEEEPSASGPPV
Ga0224452_10122672	3300022534	Groundwater Sediment	MASKLSSRQQAQLAYLVALPPKFQRLYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLSGLSETAGRMGMLVRSRGAMPIKVRGLREMQASLKSNYDAALRSANTPDGLDAEEPSGNSPPV
Ga0222622_101975382	3300022756	Groundwater Sediment	MADKLSSRQQAQLAYLEVLPQKFKRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGGMPVKVRGLREMQSSLKSSYDAALRSA
Ga0209431_105124752	3300025313	Soil	MAPKLSSRQQAQLAYLELLPQKLQRIYSVVEQLASPRVDETLMRALGRLVDDIKGNAASLSLGGLAETAGRMGMLVRGGGGLPTKVRGLRELQGSLKINYDAALRSASTPDGVGGEEPSEGGPLV
Ga0209341_105263402	3300025325	Soil	MAPKLSSRQQAQLAYLQLLPQKFQRIYSVVEQLASPRVDETLMRALGRLVDDIKGNAASLSLGGLAETAGRMGMLVRGGGGLPTKVRGLRELQGSLKINYDAALRSASTPDGVGGEEPSEGGPLV
Ga0209341_106085391	3300025325	Soil	MPPKLSSRQQAQLAYLELMPQKLQRIYSVVEQLASPRVDETLMRTLGRLVDDIKGNAASLSLGGLAETAGRMGMLVRGGGGLPTKVRGLRELQGSLKINYDAAL
Ga0209341_111765202	3300025325	Soil	MAPKLSSRQQAQLAYLELLPQKLQRIYSVVEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRGGGGLPTKVRGLRELQGSLKINYDAALRSAT
Ga0209751_109372681	3300025327	Soil	HRAAHVLDSPSLRSQVTMAPKLSSRQQAQLAYLQLLPQKFQRIYSVVEQLASPRVDETLMRALGRLVDDIKGNAASLSLGGLAETAGRMGMLVRGGGGLPTKVRGLRELQGSLKINYDAALRSASTPDGVGGEEPSEGGPLV
Ga0210114_10408742	3300025795	Natural And Restored Wetlands	MASKLSSRQQAQLAYLELLPPKLQRIYSVVEQMAAPRVDEALIRGLGRLLDDIKGNAASLSLSGLADVAGRMAMLVRTGGGMSVKVRGLRELQGSLKINYDAALRSATTPAAPEDAPGGL
Ga0209999_11039582	3300027543	Arabidopsis Thaliana Rhizosphere	MAQKLSSRQQAQVAFLERIAPKLPRIYSLVEQLAAPKVDETVLRALGRILEEIKGNAAGLSLGPLADTAGRMVMLIRSGGAMPVKVRGLRELHGSLKTNYDAALRSATTPEEDPVE
Ga0214468_10760871	3300027647	Soil	KLQRIYSVIEQMASPRVDEALIRGLGRLLDDIKGNAASLSLGGLADTAGRMGMLVRSGGGLPMKVRGLRELQGSLKINYDAALRSATTPGVIDAEGPSAADPQA
Ga0209971_11083182	3300027682	Arabidopsis Thaliana Rhizosphere	MAPKLSSRQQAQVAYLELLPQKLQRIYSVIEQMAAPRVDEALARALGRLLDDIKGNAASLSMGTLADTAGRMGMLVRGGGGMPAKVRGLRELQGSLKLSYDAALRAATTPEDGVGE
Ga0209286_13188432	3300027713	Freshwater Sediment	MPPKLSSRQQAQLAYLELMPQKLQRIYSVVEQLASPRVDETLMRTLGRLVDDIKGNAASLSLGGLAETAGRMGMLVRGGGGLPTKVRGLRELQGSLKINYDAALRSATTPVGPGEEEP
Ga0209592_12462522	3300027731	Freshwater Sediment	MPPKLSSRQQAQLAYLELMPQKLQRIYSVVEQLASPRVDETLMRTLGRLVDDIKGNAASLSLGGLAETAGRMGMLVRGGGGLPTKVRGLRELQGSLKINYDAALRSATTPVGPGEEEPDTGGPPV
Ga0307311_100780473	3300028716	Soil	GIMASKLSSRQQAQLAYLELLPKKLQRIYSVVEQMALPRVDETLARGLGRLLDDIKGNAASLSMSGLSDTAGRMGMLVRGGGGMPQKVRGLREMQGSLKINYDAALRSATTPEGLGGEETPVIPPV
Ga0307298_100603311	3300028717	Soil	ARPDVLDSPHLNPVGIMASKLSSRQQAQLAYLELLPKKLQRIYSVVEQMALPRVDETLARGLGRLLDDIKGNAASLSMSGLSDTAGRMGMLVRGGGGMPQKVRGLREMQGSLKINYDAALRSATTPEGLGGEETPVIPPV
Ga0307323_101488891	3300028787	Soil	MASKLSSRQQAQLAYLELLPKKLQRIYSVVEQMALPRVDETLARGLGRLLDDIKGNAASLSMSGLSDTAGRMGMLVRGGGGMPQKVRGLREMQGSLKINYDAALRSATTPEGLGGEETPVIPPV
Ga0307290_101265602	3300028791	Soil	MASKLSSRQQAQLAYLELLPKKLQRIYSVVEQMALPRVDETLARGLGRLLDDIKGNAASLSMSGLSDTAGRMGMLVRGGGGMPQKVRGLREMQGSLKINYDAALRSATTPEGQGEETPGTIPPV
Ga0307299_103115702	3300028793	Soil	KLSSRQQAQLAYLEVLPQKFKRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGGMPVKVRGLREMQSSLKSSYDAALRSATTPEGIEGEAPSESSPPV
Ga0307281_100449002	3300028803	Soil	MASKLSSRQQAQAAYLGALPPKFQRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGQMPIKVRGLREMQVSLKTNYDAALRSATTPEGVGGEEPSGSSPPA
Ga0307310_105624471	3300028824	Soil	RQQAQLAYLEALPQKFQRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGGMPVKVRGLREMQSSLKSSYDAALRSATTPEGIEGEAPSESSPPV
Ga0299907_103077901	3300030006	Soil	RQQAQLAYLELLPQKLQRIYSVIEQMASPRVDEALIRGLGRLLDDIKGNAASLSLGGLADTAGRMGMLVRSGGGLPMKVRGLRELQGSLKINYDTALRSATTPGVIDAEGPSAADPQA
Ga0302046_103202641	3300030620	Soil	MAPKLSSRQQAQLAYLELLPPKFQRIYSVVEQLALPRVDETLMRVLGRLVDDIKGNAASLSLAGLAETAGRMGMVVRSGGGMPNKVRGLRELQGSLKINYDAALRSATTPGAPGEEEPSA
Ga0308178_10869403	3300030990	Soil	LLPKKLQRIYSVVEQMALPRVDETLARGLGRLLDDIKGNAASLSMSGLSDTAGRMGMLVRGGGGMPQKVRGLREMQGSLKINYDAALRSATTPEGLGGEETPVIPPV
Ga0308189_104690671	3300031058	Soil	QQAQVAFLELLPQKLQRIYSLVERLALPKVDETTLRGLGRLLDDIKGNSAALSLSGLAETAGRMGMLVRGGGGMPMKVRGLRELNSSLKVNYDTALRRATTPEAEDSADA
Ga0308187_101683741	3300031114	Soil	SRQQAQLAYLVALPPKFQRLYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGGMPVKVRGLREMQSSLKSSYDAALRSATTPEGIEGEAPSESSPPV
Ga0299913_112168321	3300031229	Soil	MPPKLSSRQQAQLAYLELLPQKLQRIYSVVEQMASPRVDEALMRNLGRLVDEIKGTAASLSMGSLADTAGRMGMLIRSGGGLPMKVRGLRELQGSLKINYDAALRSATTPEEPGGESPP
Ga0308194_101861432	3300031421	Soil	ADKLSSRQQAQLAYLEVLPQKFKRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGGMPVKVRGLREMQSSLKSSYDAALRSATTPEGIEGEAPSESSPPV
Ga0308179_10213961	3300031424	Soil	IMADKLSSRQQAQLAYLEVLPQKFKRIYSVIEQMASPRVDEALMRGLGRLLDDIKGNAASLSLGGLAETAGRMGMLVRSRGGMPVKVRGLREMQSSLKSSYDAALRSATTPEGIEGEAPSESSPPV
Ga0307408_1000068104	3300031548	Rhizosphere	MPEKLSSRQQAQVAFLELLPQKFQRIYSVIEQMAGPRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGMPMKVRGLRELQGSLKINYDAALRSATTPERLAGEEAEDSPV
Ga0307408_1001690422	3300031548	Rhizosphere	MPQKLSSRQQAQVAFLELLPQKFQRIYSVIEQMAGPRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGMPMKVRGLRELQGSLKINYDAALRSATTPDRLAGEEAEDGPPV
Ga0307405_100557752	3300031731	Rhizosphere	MPEKLSSRQQAQVAFLELLPQKFQRIYSVIEQMAGPRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGMPMKVRGLRELQASLKINYDAALRSATTPERLAGEEAEDSPV
Ga0307413_100504533	3300031824	Rhizosphere	MAQKLSSRQQAQVAFLELLPPKLQRIYSVIEQMAGPRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGLPMKVRGLRELQGSLKINYDAALRSATTPKLAGEEAEDSPPI
Ga0307410_103216553	3300031852	Rhizosphere	QTMPQKLSSRQQAQVAFLELLPQKFQRIYSVIEQMAGPRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGMPMKVRGLRELQGSLKINYDAALRSATTPDRLAGEEAEDGPPV
Ga0307410_104068503	3300031852	Rhizosphere	MPQKLSSRQQAQVAFLELLPQKFQRIYSIIEQMAAPRVDEALARRLGRLLDEIKGNAAALSLGSLADTAGRMGMLVRGGGGLPMKVRGLRELQGSLKINYDAALRSATTPGTAGEEAEGSPPA
Ga0307410_106759831	3300031852	Rhizosphere	MAQKLSSRQQAQVAFLELLPPKLQRIYSVIEQMAGPRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGLPMKVRGLRELQGSLKIN
Ga0307410_116531291	3300031852	Rhizosphere	MAPKLSSRQQAQLAYLELLPQKLQRIYSIVEQLAGARVDESLIRGLGRLLDEIKLNAAGLSLGGLADTAGRMAMLTRGGGGMPTKVRGLRELQGSLKINYDAALRVATTPGVDDGGEPPSAPAV
Ga0307406_108293942	3300031901	Rhizosphere	MHYIHKPKPPTMPEKLSSRQQAQVAFLELLPQKFQRIYSVIEQMAGPRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGMPMKVRGLRELQGSLKINYDAALRSATTPERLAGEEAEDSPV
Ga0307406_114663151	3300031901	Rhizosphere	MVPKLSSRQQAQVAFLERIAPKLPRIYSLVEQLAGPRVDETVLRALGRIVEDIKGNAASLSLGALSDTAGRMVMLVRGGGAMAVKVRGLREMHGTLKTNYDAALRSASTPEEEPVE
Ga0307407_100514641	3300031903	Rhizosphere	LPQKFQRIYSVIEQMAGSRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGMPMKVRGLRELQGSLKINYDAALRSATTPERLAGEEAEDSPV
Ga0310900_116439561	3300031908	Soil	VAYLERLPQKLQRIYSVIEQMAGPRVDEALVRGLGRMLDDIKGNAASLSLASLADTAGRMGMLTRGGGGMAMKVRGLRELQGSLKINYDAALRSATTPDETAGDPDAGGPAPG
Ga0307412_101978103	3300031911	Rhizosphere	MPQKLSSRQQAQVAFLELLPQKFQRIYSVIEQMAGPRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGMPMKVRGLRELQGSLKINYDAALRSATTPERLAGEEAEDSPV
Ga0307409_1022012281	3300031995	Rhizosphere	MPQKLSSRQQAQVAFLELLPQKFQRIYSVIEQMAGPRVDEALARALGRLLDDIKGNAAALSLGSLADTAGRMSMLVRGGGGLPMKVRGLRELHGSLKINYDAALRSAT
Ga0307414_104230701	3300032004	Rhizosphere	FLELLPPKLQRIYSVIEQMAGPRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGLPMKVRGLRELQGSLKINYDAALRSATTPKLAGEEAEDSPPI
Ga0307414_104551772	3300032004	Rhizosphere	MHYIHKPKPPTMPEKLSSRQQAQVAFLELLPQKFQRIYSVIEQMAGPRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGMPMKVRGLRELQGSLKINYDAALRSATTPERLAGEEA
Ga0307414_111867301	3300032004	Rhizosphere	MHYIHKPKPQTMPQKLSSRQQAQVAFLELLPQKFQRIYSVIEQMAGPRVDEALARGLGRLLDDIKGNAAALSLGSLADTAGRMGMLVRGGGGMPMKVRGLRELQGSLKINYDAALRSATTPDRLAGEEAEDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091483

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences