Metagenome Family F091476

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091476
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	38 residues
Representative Sequence	RLCHLGNKFQEVLQITKLLTVFDVSNTEAEAVASFSK
Number of Associated Samples	88
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.13 %
% of genes from short scaffolds (< 2000 bps)	87.85 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.981 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.710 % of family members)
Environment Ontology (ENVO)	Unclassified (35.514 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.729 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.23% β-sheet: 0.00% Coil/Unstructured: 50.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF06245	DUF1015	35.51
PF13376	OmdA	14.02
PF08922	DUF1905	3.74
PF00072	Response_reg	1.87
PF01740	STAS	1.87
PF07689	KaiB	0.93
PF01841	Transglut_core	0.93
PF13537	GATase_7	0.93
PF12867	DinB_2	0.93
PF00069	Pkinase	0.93
PF02092	tRNA_synt_2f	0.93
PF12762	DDE_Tnp_IS1595	0.93
PF07676	PD40	0.93
PF00498	FHA	0.93
PF13560	HTH_31	0.93
PF00268	Ribonuc_red_sm	0.93
PF00239	Resolvase	0.93
PF00392	GntR	0.93
PF01842	ACT	0.93
PF04191	PEMT	0.93
PF01435	Peptidase_M48	0.93
PF13307	Helicase_C_2	0.93
PF13087	AAA_12	0.93
PF07228	SpoIIE	0.93
PF01329	Pterin_4a	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG4198	Uncharacterized conserved protein, DUF1015 family	Function unknown [S]	35.51
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.74
COG0208	Ribonucleotide reductase beta subunit, ferritin-like domain	Nucleotide transport and metabolism [F]	0.93
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	0.93
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.93
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	0.93
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.98 %
Unclassified	root	N/A	14.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.98 %
Unclassified	root	N/A	14.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.98 %
Unclassified	root	N/A	14.02 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	68.22 %
Unclassified	root	N/A	14.02 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.69 %
Unclassified	root	N/A	14.02 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.61 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.82 %
Unclassified	root	N/A	14.02 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.61 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1.87 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.82 %
Unclassified	root	N/A	14.02 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.61 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1.87 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.82 %
Unclassified	root	N/A	14.02 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1.87 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.93 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.82 %
Unclassified	root	N/A	14.02 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1.87 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.93 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10182071	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300001867\|JGI12627J18819_10399921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300002914\|JGI25617J43924_10283396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	567	Open in IMG/M
3300005339\|Ga0070660_101460947	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300005468\|Ga0070707_100406663	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300005526\|Ga0073909_10275636	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300005538\|Ga0070731_10028212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3820	Open in IMG/M
3300005541\|Ga0070733_11097584	Not Available	534	Open in IMG/M
3300005553\|Ga0066695_10529054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300005598\|Ga0066706_10020311	All Organisms → cellular organisms → Bacteria	4010	Open in IMG/M
3300005610\|Ga0070763_10823905	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005764\|Ga0066903_102065524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1096	Open in IMG/M
3300005764\|Ga0066903_104950219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	707	Open in IMG/M
3300006162\|Ga0075030_100216931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1538	Open in IMG/M
3300006881\|Ga0068865_101086320	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300009038\|Ga0099829_10009538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	6225	Open in IMG/M
3300009088\|Ga0099830_11325484	Not Available	598	Open in IMG/M
3300009088\|Ga0099830_11602173	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300009089\|Ga0099828_10167266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1951	Open in IMG/M
3300009089\|Ga0099828_10261054	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300009549\|Ga0116137_1094876	All Organisms → cellular organisms → Bacteria → Acidobacteria	882	Open in IMG/M
3300009617\|Ga0116123_1042158	All Organisms → cellular organisms → Bacteria → Acidobacteria	1330	Open in IMG/M
3300009839\|Ga0116223_10328467	All Organisms → cellular organisms → Bacteria → Acidobacteria	909	Open in IMG/M
3300010339\|Ga0074046_10030248	All Organisms → cellular organisms → Bacteria	3701	Open in IMG/M
3300010341\|Ga0074045_11011036	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300010358\|Ga0126370_12182171	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300010360\|Ga0126372_12946708	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300011270\|Ga0137391_10675539	All Organisms → cellular organisms → Bacteria → Acidobacteria	860	Open in IMG/M
3300011270\|Ga0137391_11118498	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300011271\|Ga0137393_10093679	All Organisms → cellular organisms → Bacteria → Acidobacteria	2439	Open in IMG/M
3300011271\|Ga0137393_10147353	All Organisms → cellular organisms → Bacteria → Acidobacteria	1962	Open in IMG/M
3300011271\|Ga0137393_10261913	All Organisms → cellular organisms → Bacteria → Acidobacteria	1469	Open in IMG/M
3300011271\|Ga0137393_10457224	All Organisms → cellular organisms → Bacteria → Acidobacteria	1095	Open in IMG/M
3300011271\|Ga0137393_10502182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1041	Open in IMG/M
3300012096\|Ga0137389_10241504	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300012096\|Ga0137389_10294119	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300012096\|Ga0137389_11674474	Not Available	532	Open in IMG/M
3300012189\|Ga0137388_10066666	All Organisms → cellular organisms → Bacteria	2985	Open in IMG/M
3300012189\|Ga0137388_10315827	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300012202\|Ga0137363_10236462	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1480	Open in IMG/M
3300012202\|Ga0137363_11059166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300012202\|Ga0137363_11223780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300012203\|Ga0137399_10119275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2070	Open in IMG/M
3300012205\|Ga0137362_10369219	Not Available	1243	Open in IMG/M
3300012210\|Ga0137378_10220931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1764	Open in IMG/M
3300012357\|Ga0137384_10173136	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300012917\|Ga0137395_11287037	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300012925\|Ga0137419_10947818	Not Available	711	Open in IMG/M
3300012925\|Ga0137419_11838957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300012927\|Ga0137416_10213528	All Organisms → cellular organisms → Bacteria → Acidobacteria	1556	Open in IMG/M
3300012929\|Ga0137404_10239751	All Organisms → cellular organisms → Bacteria → Acidobacteria	1552	Open in IMG/M
3300012929\|Ga0137404_11871836	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300012930\|Ga0137407_11279801	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300012989\|Ga0164305_11818238	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300013296\|Ga0157374_10363137	All Organisms → cellular organisms → Bacteria → Acidobacteria	1440	Open in IMG/M
3300015245\|Ga0137409_10346318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300016270\|Ga0182036_11023918	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300016319\|Ga0182033_10902813	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300016357\|Ga0182032_11644851	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300016371\|Ga0182034_11036695	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300016371\|Ga0182034_12044900	Not Available	506	Open in IMG/M
3300016445\|Ga0182038_10527413	Not Available	1011	Open in IMG/M
3300017933\|Ga0187801_10045826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1577	Open in IMG/M
3300017959\|Ga0187779_10015816	All Organisms → cellular organisms → Bacteria → Acidobacteria	4304	Open in IMG/M
3300018062\|Ga0187784_10733316	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300018482\|Ga0066669_10642799	Not Available	933	Open in IMG/M
3300019788\|Ga0182028_1066170	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300020579\|Ga0210407_10525556	All Organisms → cellular organisms → Bacteria → Acidobacteria	924	Open in IMG/M
3300020579\|Ga0210407_11220520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300020580\|Ga0210403_10784255	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300020581\|Ga0210399_10971654	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300021168\|Ga0210406_11307673	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300021170\|Ga0210400_10260926	All Organisms → cellular organisms → Bacteria → Acidobacteria	1418	Open in IMG/M
3300021432\|Ga0210384_10744930	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300021475\|Ga0210392_10286394	All Organisms → cellular organisms → Bacteria → Acidobacteria	1177	Open in IMG/M
3300024181\|Ga0247693_1058603	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300025472\|Ga0208692_1059117	All Organisms → cellular organisms → Bacteria → Acidobacteria	869	Open in IMG/M
3300025932\|Ga0207690_10272173	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300026313\|Ga0209761_1278866	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300026475\|Ga0257147_1016942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1002	Open in IMG/M
3300026514\|Ga0257168_1111467	Not Available	609	Open in IMG/M
3300026523\|Ga0209808_1078717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1425	Open in IMG/M
3300026529\|Ga0209806_1296286	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300026538\|Ga0209056_10583722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300026551\|Ga0209648_10173327	Not Available	1678	Open in IMG/M
3300026551\|Ga0209648_10448717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300027625\|Ga0208044_1173460	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300027775\|Ga0209177_10233172	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300027825\|Ga0209039_10007081	All Organisms → cellular organisms → Bacteria	7249	Open in IMG/M
3300027846\|Ga0209180_10203546	All Organisms → cellular organisms → Bacteria → Acidobacteria	1141	Open in IMG/M
3300027911\|Ga0209698_11292455	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300028536\|Ga0137415_10670190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300031057\|Ga0170834_105564449	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300031708\|Ga0310686_107011290	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300031720\|Ga0307469_12091494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300031753\|Ga0307477_10107636	Not Available	1940	Open in IMG/M
3300031754\|Ga0307475_10012247	All Organisms → cellular organisms → Bacteria	5761	Open in IMG/M
3300031754\|Ga0307475_10181786	All Organisms → cellular organisms → Bacteria → Acidobacteria	1678	Open in IMG/M
3300031879\|Ga0306919_11107342	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300031890\|Ga0306925_10381934	All Organisms → cellular organisms → Bacteria → Acidobacteria	1511	Open in IMG/M
3300031945\|Ga0310913_10176863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1485	Open in IMG/M
3300031962\|Ga0307479_11836053	Not Available	557	Open in IMG/M
3300032180\|Ga0307471_102149597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300033289\|Ga0310914_11703526	Not Available	534	Open in IMG/M
3300033402\|Ga0326728_10197953	All Organisms → cellular organisms → Bacteria → Acidobacteria	2031	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.26%
Host-Associated	Host-Associated	3.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.72%
Aquatic	Environmental → Aquatic	6.54%
Plants	Host-Associated → Plants	3.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.78%
Freshwater	Environmental → Aquatic → Freshwater	4.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.80%
Sediment	Environmental → Aquatic → Sediment	1.87%
Peat	Environmental → Terrestrial → Peat	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.57%
Loam	Environmental → Terrestrial → Soil → Loam	6.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.87%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.87%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300025472	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101820713	3300001593	Forest Soil	LSNLGTKFQEILQITKLVTVFQVFKTEAAAVASLSK*
JGI12627J18819_103999211	3300001867	Forest Soil	NLGTKFQEILQITKLVTVFQVFNTEAAALASFAN*
JGI25617J43924_102833961	3300002914	Grasslands Soil	ATLMLSNLGRKFNELLQLTKIVTVFEVCNTEAAAVASFSK*
Ga0070660_1014609471	3300005339	Corn Rhizosphere	LCHLGSKFQEVLQITKLLTVFEVYDTEAAAVASFSKGAGA*
Ga0070708_1004615072	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LSAKTQGASLKLCHLGGKFQEILQLTKLTMVFHVSTTEAVALASFSKPPDEPPI*
Ga0070707_1004066634	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SHHTAKKEGASLRLCHLDNKFQQVLQITKLLTVLYISNTEAEAVASLSN*
Ga0073909_102756362	3300005526	Surface Soil	AMRLCNLGRKFSKVLQLTKLTTVFQVYGTEAAAVASFSE*
Ga0070731_100282126	3300005538	Surface Soil	HLDNKFQQVLQITKLMTLLGISNTEAEAVASFSS*
Ga0070733_110975841	3300005541	Surface Soil	KFQEVLQITKLLTVFDVYDTEAQAVSSFSKSAGA*
Ga0066695_105290542	3300005553	Soil	LCHLGSKLQEVLQITRLSTVFCVCNTEAVAVASFSV*
Ga0066706_100203111	3300005598	Soil	GSKFQEVLQITKLLTVFDVYKTEAEAVASFSKGAGA*
Ga0070763_108239052	3300005610	Soil	TTAKSGGASLRLCHLGSKFNELLYITRLITVFDVSNTQADAVRSFTS*
Ga0066903_1020655242	3300005764	Tropical Forest Soil	AKKEGASMRLCHLSTRFKELLQIVKLLTFFEVFDTEAAAVASFSK*
Ga0066903_1049502192	3300005764	Tropical Forest Soil	LCHLGSKFQEVLQITKLLTVFDVSNTEAEAVAALSQ*
Ga0075030_1002169312	3300006162	Watersheds	LCHLGTKFTEVLQITKLMTIFDVYNTEAEAVSSFSK*
Ga0068865_1010863201	3300006881	Miscanthus Rhizosphere	CHLGSKFQEVLQITKLLTVFEVFDTEAAAVASFSQ*
Ga0099829_100095381	3300009038	Vadose Zone Soil	KFQEVLQITKLLTVFDVYNSEAEAVSSFSKGAGA*
Ga0099830_113254842	3300009088	Vadose Zone Soil	HLGSKFQEVLQITKLLTVFEVCDTEAAAVASFSN*
Ga0099830_116021732	3300009088	Vadose Zone Soil	SNLERKFQEILQITKLVTVFQVFNTEAAAVASFSR*
Ga0099828_101672661	3300009089	Vadose Zone Soil	GSKFQEVLQITKLLTVFDVFNSEAEAVASFSKGAGA*
Ga0099828_102610544	3300009089	Vadose Zone Soil	HLGSKFQEVLQITKLLTVFDVFNTEAEAVASFSK*
Ga0116137_10948762	3300009549	Peatland	RLCHLGAKFTEVLQITKLMTIFDVSNTEAEAVASFSK*
Ga0116123_10421582	3300009617	Peatland	ASLRLCHLGSKFQEVMQITKLLTVFEVCDTEAAAVASFSK*
Ga0116223_103284671	3300009839	Peatlands Soil	RLCHLGAKFTEVLQITKLMTIFDVSNTEAEAVASFAK*
Ga0074046_100302485	3300010339	Bog Forest Soil	ASLRLCHLGAKFTEVLQITKLMTIFDVSNTEAEAVASFSK*
Ga0074045_110110362	3300010341	Bog Forest Soil	CHLGTKFQEVLQITKLMTIFDVYNTEAEAVGSFSK*
Ga0126370_121821711	3300010358	Tropical Forest Soil	CHLGSKFQEVLQITKLLTVFEVFDTEAAAVASFSK*
Ga0126372_129467081	3300010360	Tropical Forest Soil	LCHLGSKFQEVLQITKLLTVFEVFDTEAAAVASFSK*
Ga0137391_106755392	3300011270	Vadose Zone Soil	LCHLGNKFQEVLQITKLLTVFDVSNTEAEAVASFST*
Ga0137391_111184982	3300011270	Vadose Zone Soil	SLRLCHLGNKFQEVLQITKLLTVFDVSNTEAEAVASFSK*
Ga0137393_100936793	3300011271	Vadose Zone Soil	RLCHLGNKFQEVLQITKLLTVFDVSNTEAEAVASFSK*
Ga0137393_101473531	3300011271	Vadose Zone Soil	CHLGSKFQEVLQITKLLTVFEVCDTEAAAVASFSN*
Ga0137393_102619132	3300011271	Vadose Zone Soil	ASLRLCHLGNKFQEVLQITKLLTVFDVSNTEAEAVASFSK*
Ga0137393_104572241	3300011271	Vadose Zone Soil	KFQEVLQITKLLTVFDVYNSEAEAVASFSKGAGA*
Ga0137393_105021821	3300011271	Vadose Zone Soil	RLCHLGSKFQEVLQITKLVTVFEVRDTEAAAVASFSN*
Ga0137389_102415042	3300012096	Vadose Zone Soil	CHLGSKFQEVLQITKLLTVFEVCDTEAAAFASFSK*
Ga0137389_102941191	3300012096	Vadose Zone Soil	HLGSKFQEVLQITKLLTVFDVFNTEAEAVRSFAK*
Ga0137389_116744741	3300012096	Vadose Zone Soil	KFQEVLQITKLLTVFDVYNTEAEAVGSFSKGAGA*
Ga0137388_100666665	3300012189	Vadose Zone Soil	ALRLCHLGSKFQEVLQITKLLTVFDVFNTEAEAVRSFAK*
Ga0137388_103158273	3300012189	Vadose Zone Soil	AALRLCHLGSKFQEVLQITKLLTVFDVFNTEAEAVRSFAK*
Ga0137363_102364621	3300012202	Vadose Zone Soil	ASLRLCHLGSKFQEVLQITKLLTVFEVCETEAAAVASFSN*
Ga0137363_110591662	3300012202	Vadose Zone Soil	ASLRLCHLGSKFQEVLQITKLLTVFEVCDTEAAALASFSN*
Ga0137363_112237801	3300012202	Vadose Zone Soil	LCHLGSKFQEVLQITKLLTVFDVFNTEAEAVRSFTK*
Ga0137399_101192754	3300012203	Vadose Zone Soil	GSKFQEVLQITKLLTVFDVYKTEAEAVASFAKGAGV*
Ga0137362_103692191	3300012205	Vadose Zone Soil	GSKFQEVLQITKLLTVFDVYNTEAEAVGSFSKGAGA*
Ga0137378_102209315	3300012210	Vadose Zone Soil	SLRLCHLGSKFQEVLQITKLLTVFDVFNTEAEAVASFSKGAGA*
Ga0137384_101731363	3300012357	Vadose Zone Soil	HLGSKFQEVLQITKLLTVFDVSNTEAEAVASFSQ*
Ga0137395_112870371	3300012917	Vadose Zone Soil	LRLCHLGNKFQEVLQITKLLTVFDVSNTEAEAVASFSK*
Ga0137419_109478182	3300012925	Vadose Zone Soil	GASLILSNLGTKFQEILQITKLVTVFQVFNTEAAAVASFSK*
Ga0137419_118389572	3300012925	Vadose Zone Soil	GSKFQEVLQMTKMLTVFDVYNTEAEAVASFSKGAGA*
Ga0137416_102135281	3300012927	Vadose Zone Soil	KFQEVLQITKLLTVFEVFDTEAAAVASFSRGAGA*
Ga0137404_102397511	3300012929	Vadose Zone Soil	QGSSLRLCHLGTKFTEVLQITKLMTIFDVYNTEAEAVASFSK*
Ga0137404_118718362	3300012929	Vadose Zone Soil	CHLGSKFQEVLQITKLLTVFDVSNTEAEAVASFSQ*
Ga0137407_112798011	3300012930	Vadose Zone Soil	HLGSKFQEVLQITKLLTVFDVSDTEAAAVASFSE*
Ga0164305_118182381	3300012989	Soil	AALRLCHLGSKFQEVLQITKLLTVFDVSNTEAEAVASFSK*
Ga0157374_103631372	3300013296	Miscanthus Rhizosphere	ASLRLCHLGSKFQEVLQITKLLTVFEVYDTEAAAVSSFSQ*
Ga0137409_103463181	3300015245	Vadose Zone Soil	ALRLCHLGSKFQEVLQITKLLTVFDVFNTEAEAVRSFSK*
Ga0182036_110239182	3300016270	Soil	LRLCHLGTKFQEVLQITKLMTIFDVYNTEAEAVASFSKP
Ga0182033_109028131	3300016319	Soil	LRLCHIGSKLRELLQITKLLTAFEVFDTEATAVASFSK
Ga0182032_116448511	3300016357	Soil	ASLRLCHLGTKFTEVLQITKLMTIFDVYNSEAEAVASFSK
Ga0182034_110366951	3300016371	Soil	AKKDGAPLRLCHLGGKSREVLKITKMLTAFEVFDTEAEAVASFSK
Ga0182034_120449001	3300016371	Soil	VTSQHTAKKDGAPLHLCHLGSKFREVLQITKLLTAFEVFDTEAAA
Ga0182038_105274131	3300016445	Soil	DGAPLRLCHLGCKLRELLQITKLLTAFQVFDTEADAVASFPK
Ga0187801_100458261	3300017933	Freshwater Sediment	LCHLGSKFQEVLQITKLLTVFEVFNTEAEAVASFAK
Ga0187779_100158164	3300017959	Tropical Peatland	LKLCHLGTKFQEVLQITKLMTIFDVYTTEAEAVGSFSK
Ga0187784_107333161	3300018062	Tropical Peatland	KLCHLGTKFQEVLQITKLMTIFDVYNTEAEAVASFLK
Ga0066669_106427992	3300018482	Grasslands Soil	LKLCHLGSKLQEVLQITRLSTVFCVCNTEAVAVASFSV
Ga0182028_10661702	3300019788	Fen	NQGASLRLCHLGAKFTEVLQITKLMTIFDVSNTEAEAVASFSK
Ga0210407_105255561	3300020579	Soil	SKFQEVLQITKLLTVFDVYNTEAEAVASFSKGAGV
Ga0210407_112205201	3300020579	Soil	RLCHLGSKFQEVLQITKLVTIFEVYDTEAAAVASFSN
Ga0210403_107842551	3300020580	Soil	SSLRLCHLGTKFTEVLQITKLMTIFDVYNTEAEAVASFSK
Ga0210399_109716542	3300020581	Soil	QGSSLRLCHLGTKFTEVLQITKLMTIFDVYNTEAEAVASFSK
Ga0210406_113076732	3300021168	Soil	GSKFQEVLQITKLLTVFDVYNTEAEAVGSFSKGAGA
Ga0210400_102609261	3300021170	Soil	GSSLRLCHLGTKFTEVLQITKLMTIFDVYNTEAEAVASFSK
Ga0210384_107449301	3300021432	Soil	SKFQEVLQITKLLTVFDVYNSEAEAVSSFSKSAGV
Ga0210392_102863942	3300021475	Soil	ASRRLCHLGTKFQEVLQITKLMTIFDVSNTEAEAVASFSKP
Ga0247693_10586032	3300024181	Soil	LCHLGSKFQEVLQITKLLTVFEVYDTEAAAVASFSQ
Ga0208692_10591171	3300025472	Peatland	RLCHLGAKFTEVLQITKLMTIFDVSNTEAEAVASFSK
Ga0207690_102721733	3300025932	Corn Rhizosphere	GSKFQEVLQITKLLTVFEVYDTEAAAVASFSKGAGA
Ga0209761_12788661	3300026313	Grasslands Soil	GSKFQEVLQITKLLTVFEVYDTETAAVASFSKSSGASH
Ga0257147_10169422	3300026475	Soil	QGASLRLCHLGSKFQEVLQITKLLTVFEVCETEAAAVASFSN
Ga0257168_11114671	3300026514	Soil	QGASLILSNLGTKFQEILQITKLVTVFQVFNTEAAAVASFSK
Ga0209808_10787173	3300026523	Soil	SLGIIKFQEVLQITKLMTVFDVYNTEAEAVASFSK
Ga0209806_12962862	3300026529	Soil	CHLGSKFQEVLQITKLLTVFDVFNTEAEAVRSFAK
Ga0209056_105837221	3300026538	Soil	RLCHLGSKFHEVLQITKLLTVFEVCDTEAAAVASFSN
Ga0209648_101733271	3300026551	Grasslands Soil	LSNLGRKFQEVLQITKLLTVFEVCDTEAAAVASFSN
Ga0209648_104487173	3300026551	Grasslands Soil	ASLRLCHLGSKFQEVLQITKLLTVFEVCDTEAAAVASFSN
Ga0208044_11734601	3300027625	Peatlands Soil	ASLRLCHLGAKFTEVLQITKLMTIFDVSNTEAEAVASFSK
Ga0209076_10864042	3300027643	Vadose Zone Soil	NAKLQGASLILSNLGTKFQEILQITKLVTVFQVFNTEAAAVASFSK
Ga0209177_102331722	3300027775	Agricultural Soil	SKFQEVLQITKLMTVFDVYNTEAEAVASFSKSAGA
Ga0209039_100070811	3300027825	Bog Forest Soil	CHLGAKFTEVLQITKLMTIFDVSNTEAEAVASFSK
Ga0209180_102035461	3300027846	Vadose Zone Soil	TVSKFQEVLQITKLLTVFDVYNTEAEAVASFSKGAGV
Ga0209698_112924551	3300027911	Watersheds	LCHLGAKFTEVLQITKLMTIFDVSNTEAEAVASFSK
Ga0137415_106701902	3300028536	Vadose Zone Soil	ALRLCHLGSKFQEVLQITKLLTVFDVFNTEAEAVRSFAK
Ga0170834_1055644492	3300031057	Forest Soil	ASLRLCHLGAKFQEVLQITKLLTVFDVSNTEAEAVASFSK
Ga0310686_1070112901	3300031708	Soil	LCHLGTKFNELLQLTRLITIFEVYNTQEEAIKSFSN
Ga0307469_120914942	3300031720	Hardwood Forest Soil	LCHLGSKFQEVLQITKLLTVFDVFNTEAEAVRSFAK
Ga0307477_101076361	3300031753	Hardwood Forest Soil	CHLGRKFREVLQMTKLTTVFQVCNTEAAAVASFSQ
Ga0307475_100122471	3300031754	Hardwood Forest Soil	SLRLCHLGTKFTEVLQITKLMTIFDVYNTEAEAVASFSK
Ga0307475_101817861	3300031754	Hardwood Forest Soil	CHLGSKFQEVLQITKLLTVFDVFNTEAEAVASFRK
Ga0306919_111073422	3300031879	Soil	KLCHLGTKFQEVLQITKLMTIFDVYNTEAEAVASFSK
Ga0306925_103819341	3300031890	Soil	LCHLGSKFQEVLQITKLLTVFEVFDTEAAAVASFSK
Ga0310913_101768633	3300031945	Soil	HTAKKDGAPLHLCHLGSKFREVLQITKLLTAFEVFDTEAAAVASFSK
Ga0307479_118360531	3300031962	Hardwood Forest Soil	SHHTAKKESASLRLCHLDNKSQQLLQITKWLTVLYISNTEAEAVASFSK
Ga0307471_1021495971	3300032180	Hardwood Forest Soil	RLCHLGSKFQEVLQITKLLTVFDVFNTEAEAVSSFAK
Ga0310914_117035261	3300033289	Soil	VTSHHTAKKEGASMRLCHLSTTFKALLKITKQLTVFEVFDTEAAAVASFSK
Ga0326728_101979531	3300033402	Peat Soil	LRLCHLGAKFTEVLQITKLMTIFDVSNTEAEAVASFSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091476

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences